BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047020
(266 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 152/274 (55%), Gaps = 17/274 (6%)
Query: 2 YALEELKMATNDFRIR--IGVGATSFVYLAELGDGNFGAVKRVMEERG-GSRKIFLDEVS 58
++L EL++A+++F + +G G VY L DG AVKR+ EER G F EV
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
++ H NL+ L GFC+ E+LL+ Y+AN S+ + +S L W R IAL
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER-PESQPPLDWPKRQRIAL 146
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
AR L YLH DP IIHRD+K++NILL ++ A + DFGL KL + D + ++
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH---VXXAV 203
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSI-------QGSATLAEWTEEC 231
+G+ G++ YL+TG S K+DV+ +GV+LLELITG ++ L +W +
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 232 RRNKNVEVWAQMLDPKLNGDANMEQLRVLIRICM 265
+ K +E ++D L G+ E++ LI++ +
Sbjct: 264 LKEKKLEA---LVDVDLQGNYKDEEVEQLIQVAL 294
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 151/274 (55%), Gaps = 17/274 (6%)
Query: 2 YALEELKMATNDFRIR--IGVGATSFVYLAELGDGNFGAVKRVMEER-GGSRKIFLDEVS 58
++L EL++A+++F + +G G VY L DG AVKR+ EER G F EV
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
++ H NL+ L GFC+ E+LL+ Y+AN S+ + +S L W R IAL
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER-PESQPPLDWPKRQRIAL 138
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
AR L YLH DP IIHRD+K++NILL ++ A + DFGL KL + D + ++
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH---VXXAV 195
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSI-------QGSATLAEWTEEC 231
+G G++ YL+TG S K+DV+ +GV+LLELITG ++ L +W +
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 232 RRNKNVEVWAQMLDPKLNGDANMEQLRVLIRICM 265
+ K +E ++D L G+ E++ LI++ +
Sbjct: 256 LKEKKLEA---LVDVDLQGNYKDEEVEQLIQVAL 286
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 141/264 (53%), Gaps = 20/264 (7%)
Query: 4 LEELKMATNDF--RIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLL 61
L +L+ ATN+F + IG G VY L DG A+KR E + F E+ L
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV--LSWSNRLSIALD 119
HP+LV L+GFC E+ E +L+ +Y+ N +L + YG L +SW RL I +
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL---YGSDLPTMSMSWEQRLEICIG 147
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
AR L YLH++A IIHRD+KS NILL ++ K+ DFG+ K G + ++ +K
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKG--TELDQTHLXXVVK 202
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGS-----ATLAEWTEECRRN 234
G+ GY+D Y G ++ KSDVYSFGV+L E++ +I S LAEW E N
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262
Query: 235 KNVEVWAQMLDPKLNGDANMEQLR 258
+E Q++DP L E LR
Sbjct: 263 GQLE---QIVDPNLADKIRPESLR 283
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 140/264 (53%), Gaps = 20/264 (7%)
Query: 4 LEELKMATNDF--RIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLL 61
L +L+ ATN+F + IG G VY L DG A+KR E + F E+ L
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV--LSWSNRLSIALD 119
HP+LV L+GFC E+ E +L+ +Y+ N +L + YG L +SW RL I +
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL---YGSDLPTMSMSWEQRLEICIG 147
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
AR L YLH++A IIHRD+KS NILL ++ K+ DFG+ K G + + +K
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKG--TELGQTHLXXVVK 202
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGS-----ATLAEWTEECRRN 234
G+ GY+D Y G ++ KSDVYSFGV+L E++ +I S LAEW E N
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262
Query: 235 KNVEVWAQMLDPKLNGDANMEQLR 258
+E Q++DP L E LR
Sbjct: 263 GQLE---QIVDPNLADKIRPESLR 283
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 121/238 (50%), Gaps = 37/238 (15%)
Query: 1 TYALEELKMATNDFRIR-IGVGATSFVYLAELGDGNFG------------AVKRV----- 42
+++ ELK TN+F R I VG ++G+G FG AVK++
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGN------KMGEGGFGVVYKGYVNNTTVAVKKLAAMVD 67
Query: 43 --MEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTY 100
EE ++ F E+ V+ + H NLV LLGF + + L+ Y+ N SL DR+
Sbjct: 68 ITTEEL---KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 101 YGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGL 160
G LSW R IA A + +LH IHRDIKS+NILL + AK++DFGL
Sbjct: 125 DGTP--PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 179
Query: 161 CKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSI 218
+ + + I G+ Y+ L G ++ KSD+YSFGV+LLE+ITGL ++
Sbjct: 180 ARAS--EKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV 234
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 121/239 (50%), Gaps = 39/239 (16%)
Query: 1 TYALEELKMATNDFRIR-IGVGATSFVYLAELGDGNFG------------AVKRV----- 42
+++ ELK TN+F R I VG ++G+G FG AVK++
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGN------KMGEGGFGVVYKGYVNNTTVAVKKLAAMVD 67
Query: 43 --MEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTY 100
EE ++ F E+ V+ + H NLV LLGF + + L+ Y+ N SL DR+
Sbjct: 68 ITTEEL---KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 101 YGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGL 160
G LSW R IA A + +LH IHRDIKS+NILL + AK++DFGL
Sbjct: 125 DGTP--PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 179
Query: 161 CKLG-PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSI 218
+ F R I G+ Y+ L G ++ KSD+YSFGV+LLE+ITGL ++
Sbjct: 180 ARASEKFAQTVMXXR---IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV 234
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 118/236 (50%), Gaps = 33/236 (13%)
Query: 1 TYALEELKMATNDFRIR-IGVGATSFVYLAELGDGNFGAVKR--VMEERGGSRKI----- 52
+++ ELK TN+F R I VG ++G+G FG V + V +K+
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGN------KMGEGGFGVVYKGYVNNTTVAVKKLAAMVD 61
Query: 53 ---------FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQ 103
F E+ V+ + H NLV LLGF + + L+ Y+ N SL DR+ G
Sbjct: 62 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 104 SLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL 163
LSW R IA A + +LH IHRDIKS+NILL + AK++DFGL +
Sbjct: 122 P--PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 164 G-PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSI 218
F R I G+ Y+ L G ++ KSD+YSFGV+LLE+ITGL ++
Sbjct: 177 SEKFAQXVMXXR---IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV 228
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 119/218 (54%), Gaps = 22/218 (10%)
Query: 5 EELKMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVMEERGGSRKI--FLDEVSVL 60
+++ + D I+ +GA SF V+ AE G+ AVK +ME+ + ++ FL EV+++
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIM 88
Query: 61 LRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDI 120
R+ HPN+V +G + ++ EYL+ SL+ +H + L RLS+A D+
Sbjct: 89 KRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDV 146
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT---- 176
A+ + YLH++ +PPI+HR++KS N+L+ K+ DFGL +L K T
Sbjct: 147 AKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL---------KASTFLSS 196
Query: 177 -SIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
S G+ ++ L + KSDVYSFGV+L EL T
Sbjct: 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 117/213 (54%), Gaps = 12/213 (5%)
Query: 5 EELKMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVMEERGGSRKI--FLDEVSVL 60
+++ + D I+ +GA SF V+ AE G+ AVK +ME+ + ++ FL EV+++
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIM 88
Query: 61 LRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDI 120
R+ HPN+V +G + ++ EYL+ SL+ +H + L RLS+A D+
Sbjct: 89 KRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDV 146
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKG 180
A+ + YLH++ +PPI+HRD+KS N+L+ K+ DFGL +L + G
Sbjct: 147 AKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL----KASXFLXSKXAAG 201
Query: 181 SFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ ++ L + KSDVYSFGV+L EL T
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 117/238 (49%), Gaps = 37/238 (15%)
Query: 1 TYALEELKMATNDFRIR-IGVGATSFVYLAELGDGNFG------------AVKRV----- 42
+++ ELK TN+F R I VG + G+G FG AVK++
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGN------KXGEGGFGVVYKGYVNNTTVAVKKLAAMVD 58
Query: 43 --MEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTY 100
EE ++ F E+ V + H NLV LLGF + + L+ Y N SL DR+
Sbjct: 59 ITTEEL---KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCL 115
Query: 101 YGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGL 160
G LSW R IA A + +LH IHRDIKS+NILL + AK++DFGL
Sbjct: 116 DGTP--PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 170
Query: 161 CKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSI 218
+ + + I G+ Y L G ++ KSD+YSFGV+LLE+ITGL ++
Sbjct: 171 ARAS--EKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV 225
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 20 VGATSFVYLAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ + ++ E+G G FG V + + E S + F++E V++++SHP
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 63
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
LV L G CLE+ L+ E++ + L D + T G+ + L + LD+ + YL
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYL 119
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
+ +IHRD+ + N L+ ++ K++DFG+ + F ++ T K +
Sbjct: 120 E---EASVIHRDLAARNCLVGENQVIKVSDFGMTR---FVLDDQYTSSTGTKFPVKWASP 173
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELIT 213
+ S+KSDV+SFGVL+ E+ +
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 20 VGATSFVYLAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ + ++ E+G G FG V + + E S + F++E V++++SHP
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 61
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
LV L G CLE+ L+ E++ + L D + T G+ + L + LD+ + YL
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYL 117
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
+IHRD+ + N L+ ++ K++DFG+ + F ++ T K +
Sbjct: 118 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTR---FVLDDQYTSSTGTKFPVKWASP 171
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELIT 213
+ S+KSDV+SFGVL+ E+ +
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 20 VGATSFVYLAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ + ++ E+G G FG V + + E S + F++E V++++SHP
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 63
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
LV L G CLE+ L+ E++ + L D + T G+ + L + LD+ + YL
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYL 119
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
+IHRD+ + N L+ ++ K++DFG+ + F ++ T K +
Sbjct: 120 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTR---FVLDDQYTSSTGTKFPVKWASP 173
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELIT 213
+ S+KSDV+SFGVL+ E+ +
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 20 VGATSFVYLAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ + ++ E+G G FG V + + E S + F++E V++++SHP
Sbjct: 7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 66
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
LV L G CLE+ L+ E++ + L D + T G+ + L + LD+ + YL
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYL 122
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
+IHRD+ + N L+ ++ K++DFG+ + F ++ T K +
Sbjct: 123 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTR---FVLDDQYTSSTGTKFPVKWASP 176
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELIT 213
+ S+KSDV+SFGVL+ E+ +
Sbjct: 177 EVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 20 VGATSFVYLAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ + ++ E+G G FG V + + E S + F++E V++++SHP
Sbjct: 5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 64
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
LV L G CLE+ L+ E++ + L D + T G+ + L + LD+ + YL
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYL 120
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
+IHRD+ + N L+ ++ K++DFG+ + F ++ T K +
Sbjct: 121 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTR---FVLDDQYTSSTGTKFPVKWASP 174
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELIT 213
+ S+KSDV+SFGVL+ E+ +
Sbjct: 175 EVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 20 VGATSFVYLAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ + ++ E+G G FG V + ++E S F++E V++++SHP
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPK 83
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
LV L G CLE+ L+ E++ + L D + T G+ + L + LD+ + YL
Sbjct: 84 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYL 139
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
+IHRD+ + N L+ ++ K++DFG+ + F ++ T K +
Sbjct: 140 EEAC---VIHRDLAARNCLVGENQVIKVSDFGMTR---FVLDDQYTSSTGTKFPVKWASP 193
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELIT 213
+ S+KSDV+SFGVL+ E+ +
Sbjct: 194 EVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 100/186 (53%), Gaps = 18/186 (9%)
Query: 31 LGD--GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCLE-KGEQLLLLEY 87
LGD GN AVK + + + + FL E SV+ ++ H NLV LLG +E KG ++ EY
Sbjct: 30 LGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 87
Query: 88 LANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILL 147
+A SL D + + G+S VL L +LD+ A+EYL +HRD+ + N+L+
Sbjct: 88 MAKGSLVDYLRSR-GRS--VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLV 141
Query: 148 IDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVL 207
+DN AK++DFGL K Q + K + L STKSDV+SFG+L
Sbjct: 142 SEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGIL 194
Query: 208 LLELIT 213
L E+ +
Sbjct: 195 LWEIYS 200
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 98/186 (52%), Gaps = 18/186 (9%)
Query: 31 LGD--GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCLE-KGEQLLLLEY 87
LGD GN AVK + + + + FL E SV+ ++ H NLV LLG +E KG ++ EY
Sbjct: 211 LGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268
Query: 88 LANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILL 147
+A SL D + + + VL L +LD+ A+EYL +HRD+ + N+L+
Sbjct: 269 MAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLV 322
Query: 148 IDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVL 207
+DN AK++DFGL K Q + K + L STKSDV+SFG+L
Sbjct: 323 SEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 375
Query: 208 LLELIT 213
L E+ +
Sbjct: 376 LWEIYS 381
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 100/186 (53%), Gaps = 18/186 (9%)
Query: 31 LGD--GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCLE-KGEQLLLLEY 87
LGD GN AVK + + + + FL E SV+ ++ H NLV LLG +E KG ++ EY
Sbjct: 24 LGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81
Query: 88 LANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILL 147
+A SL D + + G+S VL L +LD+ A+EYL +HRD+ + N+L+
Sbjct: 82 MAKGSLVDYLRSR-GRS--VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLV 135
Query: 148 IDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVL 207
+DN AK++DFGL K Q + K + L STKSDV+SFG+L
Sbjct: 136 SEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 188
Query: 208 LLELIT 213
L E+ +
Sbjct: 189 LWEIYS 194
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 100/186 (53%), Gaps = 18/186 (9%)
Query: 31 LGD--GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCLE-KGEQLLLLEY 87
LGD GN AVK + + + + FL E SV+ ++ H NLV LLG +E KG ++ EY
Sbjct: 39 LGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96
Query: 88 LANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILL 147
+A SL D + + G+S VL L +LD+ A+EYL +HRD+ + N+L+
Sbjct: 97 MAKGSLVDYLRSR-GRS--VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLV 150
Query: 148 IDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVL 207
+DN AK++DFGL K Q + K + L STKSDV+SFG+L
Sbjct: 151 SEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 203
Query: 208 LLELIT 213
L E+ +
Sbjct: 204 LWEIYS 209
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 105/216 (48%), Gaps = 20/216 (9%)
Query: 18 IGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCLE 77
+G GA V A+ + A+K++ E RK F+ E+ L RV+HPN+V L G CL
Sbjct: 16 VGRGAFGVVCKAKWRAKDV-AIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 78 KGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIH 137
L++EY SL++ +H + L + ++ +S L ++ + YLHS +IH
Sbjct: 73 P--VCLVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 138 RDIKSSNILLIDDNHA-KLADFGL-CKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFV 195
RD+K N+LL+ K+ DFG C + T+ KGS ++
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTACDIQ--------THMTNNKGSAAWMAPEVFEGSNY 180
Query: 196 STKSDVYSFGVLLLELITGLKS---IQGSATLAEWT 228
S K DV+S+G++L E+IT K I G A W
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA 216
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 105/216 (48%), Gaps = 20/216 (9%)
Query: 18 IGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCLE 77
+G GA V A+ + A+K++ E RK F+ E+ L RV+HPN+V L G CL
Sbjct: 17 VGRGAFGVVCKAKWRAKDV-AIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 78 KGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIH 137
L++EY SL++ +H + L + ++ +S L ++ + YLHS +IH
Sbjct: 74 P--VCLVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 138 RDIKSSNILLIDDNHA-KLADFGL-CKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFV 195
RD+K N+LL+ K+ DFG C + T+ KGS ++
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTACDIQ--------THMTNNKGSAAWMAPEVFEGSNY 181
Query: 196 STKSDVYSFGVLLLELITGLKS---IQGSATLAEWT 228
S K DV+S+G++L E+IT K I G A W
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA 217
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 14/199 (7%)
Query: 17 RIGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFC 75
+IG GA+ VY A ++ G A++++ ++ +++ ++E+ V+ +PN+V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
L E +++EYLA SL D + T G ++ ++ + +ALE+LHS +
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIA-----AVCRECLQALEFLHSNQ---V 137
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFV 195
IHRDIKS NILL D KL DFG C P + KR T + G+ ++ +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQ---ITPEQSKRSTMV-GTPYWMAPEVVTRKAY 193
Query: 196 STKSDVYSFGVLLLELITG 214
K D++S G++ +E+I G
Sbjct: 194 GPKVDIWSLGIMAIEMIEG 212
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 31 LGDGNFGAVKRVMEERGG--------------SRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
LG G FG +V G +++ FL EV V+ + HPN++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
+ + EY+ +L + + Q WS R+S A DIA + YLHS II
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQ----YPWSQRVSFAKDIASGMAYLHSMN---II 130
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCK-----------LGPFNDPNRPKRQTSIKGSFGYV 185
HRD+ S N L+ ++ + +ADFGL + L P+R KR T + + ++
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY-WM 189
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELI 212
+N K DV+SFG++L E+I
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 30/210 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ +L ELG G FG VK ++++E S F++E V++ +SH
Sbjct: 6 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 65
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRM----HTYYGQSLGVLSWSNRLSIALDIARA 123
LV L G C ++ ++ EY+AN L + + H + Q L L + D+ A
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--------LEMCKDVCEA 117
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG 183
+EYL S+ +HRD+ + N L+ D K++DFGL + +D R + K
Sbjct: 118 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSRGS--KFPVR 171
Query: 184 YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L S+KSD+++FGVL+ E+ +
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKI--FLDEVSVLLRVSHPNLVGLLGF 74
IG+G VY A +GD R + S+ I E + + HPN++ L G
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 75 CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPP 134
CL++ L++E+ L + +++W A+ IAR + YLH +A P
Sbjct: 75 CLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAIVP 128
Query: 135 IIHRDIKSSNILLID--------DNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
IIHRD+KSSNIL++ + K+ DFGL + + +R + ++ G++ ++
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSA-AGAYAWMA 182
Query: 187 TNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLA 225
+ S SDV+S+GVLL EL+TG +G LA
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA 221
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 34/212 (16%)
Query: 20 VGATSFVYLAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ +L ELG G FG VK ++++E S F++E V++ +SH
Sbjct: 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 80
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRM----HTYYGQSLGVLSWSNRLSIALDIARA 123
LV L G C ++ ++ EY+AN L + + H + Q L L + D+ A
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--------LEMCKDVCEA 132
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG 183
+EYL S+ +HRD+ + N L+ D K++DFGL + +D + +S+ F
Sbjct: 133 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDD----EETSSVGSKFP 184
Query: 184 --YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L S+KSD+++FGVL+ E+ +
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 14/199 (7%)
Query: 17 RIGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFC 75
+IG GA+ VY A ++ G A++++ ++ +++ ++E+ V+ +PN+V L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
L E +++EYLA SL D + T G ++ ++ + +ALE+LHS +
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIA-----AVCRECLQALEFLHSNQ---V 138
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFV 195
IHR+IKS NILL D KL DFG C P + KR T + G+ ++ +
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQ---ITPEQSKRSTMV-GTPYWMAPEVVTRKAY 194
Query: 196 STKSDVYSFGVLLLELITG 214
K D++S G++ +E+I G
Sbjct: 195 GPKVDIWSLGIMAIEMIEG 213
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 16 IRIGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
I+IG G+T V +A E G AVK++ + R++ +EV ++ H N+V +
Sbjct: 51 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 75 CLEKGEQLLLLEYLANKSLFDRM-HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L E +++E+L +L D + HT + ++ L + RAL YLH+Q
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIATVCLSVLRALSYLHNQG-- 161
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
+IHRDIKS +ILL D KL+DFG C P R + G+ ++ ++
Sbjct: 162 -VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR----KXLVGTPYWMAPEVISRL 216
Query: 194 FVSTKSDVYSFGVLLLELITG 214
T+ D++S G++++E+I G
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDG 237
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 14/199 (7%)
Query: 17 RIGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFC 75
+IG GA+ VY A ++ G A++++ ++ +++ ++E+ V+ +PN+V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
L E +++EYLA SL D + T G ++ ++ + +ALE+LHS +
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIA-----AVCRECLQALEFLHSNQ---V 137
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFV 195
IHRDIKS NILL D KL DFG C P + KR + + G+ ++ +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQ---ITPEQSKR-SEMVGTPYWMAPEVVTRKAY 193
Query: 196 STKSDVYSFGVLLLELITG 214
K D++S G++ +E+I G
Sbjct: 194 GPKVDIWSLGIMAIEMIEG 212
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 14/199 (7%)
Query: 17 RIGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFC 75
+IG GA+ VY A ++ G A++++ ++ +++ ++E+ V+ +PN+V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
L E +++EYLA SL D + T G ++ ++ + +ALE+LHS +
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIA-----AVCRECLQALEFLHSNQ---V 137
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFV 195
IHRDIKS NILL D KL DFG C P + KR + G+ ++ +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQ---ITPEQSKRSXMV-GTPYWMAPEVVTRKAY 193
Query: 196 STKSDVYSFGVLLLELITG 214
K D++S G++ +E+I G
Sbjct: 194 GPKVDIWSLGIMAIEMIEG 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 14/199 (7%)
Query: 17 RIGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFC 75
+IG GA+ VY A ++ G A++++ ++ +++ ++E+ V+ +PN+V L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
L E +++EYLA SL D + T G ++ ++ + +ALE+LHS +
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIA-----AVCRECLQALEFLHSNQ---V 138
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFV 195
IHRDIKS NILL D KL DFG C P + KR + G+ ++ +
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQ---ITPEQSKRSXMV-GTPYWMAPEVVTRKAY 194
Query: 196 STKSDVYSFGVLLLELITG 214
K D++S G++ +E+I G
Sbjct: 195 GPKVDIWSLGIMAIEMIEG 213
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 34/212 (16%)
Query: 20 VGATSFVYLAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ +L ELG G FG VK ++++E S F++E V++ +SH
Sbjct: 5 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 64
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRM----HTYYGQSLGVLSWSNRLSIALDIARA 123
LV L G C ++ ++ EY+AN L + + H + Q L L + D+ A
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--------LEMCKDVCEA 116
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG 183
+EYL S+ +HRD+ + N L+ D K++DFGL + +D + +S+ F
Sbjct: 117 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDD----EYTSSVGSKFP 168
Query: 184 --YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L S+KSD+++FGVL+ E+ +
Sbjct: 169 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 34/212 (16%)
Query: 20 VGATSFVYLAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ +L ELG G FG VK ++++E S F++E V++ +SH
Sbjct: 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 80
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRM----HTYYGQSLGVLSWSNRLSIALDIARA 123
LV L G C ++ ++ EY+AN L + + H + Q L L + D+ A
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--------LEMCKDVCEA 132
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG 183
+EYL S+ +HRD+ + N L+ D K++DFGL + +D + +S+ F
Sbjct: 133 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDD----EYTSSVGSKFP 184
Query: 184 --YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L S+KSD+++FGVL+ E+ +
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 34/212 (16%)
Query: 20 VGATSFVYLAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ +L ELG G FG VK ++++E S F++E V++ +SH
Sbjct: 6 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 65
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRM----HTYYGQSLGVLSWSNRLSIALDIARA 123
LV L G C ++ ++ EY+AN L + + H + Q L L + D+ A
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--------LEMCKDVCEA 117
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG 183
+EYL S+ +HRD+ + N L+ D K++DFGL + +D + +S+ F
Sbjct: 118 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDD----EYTSSVGSKFP 169
Query: 184 --YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L S+KSD+++FGVL+ E+ +
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 34/212 (16%)
Query: 20 VGATSFVYLAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ +L ELG G FG VK ++++E S F++E V++ +SH
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 60
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRM----HTYYGQSLGVLSWSNRLSIALDIARA 123
LV L G C ++ ++ EY+AN L + + H + Q L L + D+ A
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--------LEMCKDVCEA 112
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG 183
+EYL S+ +HRD+ + N L+ D K++DFGL + +D + +S+ F
Sbjct: 113 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDD----EYTSSVGSKFP 164
Query: 184 --YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L S+KSD+++FGVL+ E+ +
Sbjct: 165 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 34/212 (16%)
Query: 20 VGATSFVYLAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ +L ELG G FG VK ++++E S F++E V++ +SH
Sbjct: 12 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 71
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRM----HTYYGQSLGVLSWSNRLSIALDIARA 123
LV L G C ++ ++ EY+AN L + + H + Q L L + D+ A
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--------LEMCKDVCEA 123
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG 183
+EYL S+ +HRD+ + N L+ D K++DFGL + +D + +S+ F
Sbjct: 124 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDD----EYTSSVGSKFP 175
Query: 184 --YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L S+KSD+++FGVL+ E+ +
Sbjct: 176 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 47/242 (19%)
Query: 31 LGDGNFGAVKRVMEERGGSR-----------------KIFLDEVSVLLRVSH-PNLVGLL 72
+G+GNFG V + ++ G R + F E+ VL ++ H PN++ LL
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 73 GFCLEKGEQLLLLEYLANKSLFDRMH-----------TYYGQSLGVLSWSNRLSIALDIA 121
G C +G L +EY + +L D + + LS L A D+A
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
R ++YL + IHRD+ + NIL+ ++ AK+ADFGL + ++ +K +
Sbjct: 143 RGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----------GQEVYVKKT 189
Query: 182 FGYVDTNY-----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
G + + LN +T SDV+S+GVLL E+++ + T AE E+ +
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 249
Query: 237 VE 238
+E
Sbjct: 250 LE 251
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 47/242 (19%)
Query: 31 LGDGNFGAVKRVMEERGGSR-----------------KIFLDEVSVLLRVSH-PNLVGLL 72
+G+GNFG V + ++ G R + F E+ VL ++ H PN++ LL
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 73 GFCLEKGEQLLLLEYLANKSLFDRMH-----------TYYGQSLGVLSWSNRLSIALDIA 121
G C +G L +EY + +L D + + LS L A D+A
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
R ++YL + IHRD+ + NIL+ ++ AK+ADFGL + ++ +K +
Sbjct: 153 RGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----------GQEVYVKKT 199
Query: 182 FGYVDTNY-----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
G + + LN +T SDV+S+GVLL E+++ + T AE E+ +
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259
Query: 237 VE 238
+E
Sbjct: 260 LE 261
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 14/203 (6%)
Query: 13 DFRIRIGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGL 71
D ++IG G+T V LA E G AVK + + R++ +EV ++ H N+V +
Sbjct: 48 DSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEM 107
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
L E +L+E+L +L D + S L+ ++ + +AL YLH+Q
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTDIV------SQVRLNEEQIATVCEAVLQALAYLHAQG 161
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
+IHRDIKS +ILL D KL+DFG C + P R + G+ ++ ++
Sbjct: 162 ---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR----KXLVGTPYWMAPEVIS 214
Query: 192 TGFVSTKSDVYSFGVLLLELITG 214
+T+ D++S G++++E++ G
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDG 237
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 120/248 (48%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ +G+ + +++ S FL E +++ ++ H LV L
Sbjct: 20 RLGAGQAGEVWMGYY-NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 131
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++NIL+ D K+ADFGL +L D R+ + K + +N G +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL--IEDAEXTAREGA-KFPIKWTAPEAINYGTFT 188
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 238
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 239 LYQLMRLC 246
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 47/242 (19%)
Query: 31 LGDGNFGAVKRVMEERGGSR-----------------KIFLDEVSVLLRVSH-PNLVGLL 72
+G+GNFG V + ++ G R + F E+ VL ++ H PN++ LL
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 73 GFCLEKGEQLLLLEYLANKSLFDRMH-----------TYYGQSLGVLSWSNRLSIALDIA 121
G C +G L +EY + +L D + + LS L A D+A
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
R ++YL + IHR++ + NIL+ ++ AK+ADFGL + ++ +K +
Sbjct: 150 RGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSR----------GQEVYVKKT 196
Query: 182 FGYVDTNY-----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
G + + LN +T SDV+S+GVLL E+++ + T AE E+ +
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 256
Query: 237 VE 238
+E
Sbjct: 257 LE 258
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQ------ICKGM 130
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 131 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 188 APESLTESKF-SVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 158
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 159 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 215
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 216 APESLTESKF-SVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 133
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 134 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 190
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 191 APESLTESKF-SVASDVWSFGVVLYELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 131
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 132 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 188
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 189 APESLTESKF-SVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 126
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 127 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 183
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 184 APESLTESKF-SVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 125
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 126 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 182
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 183 APESLTESKF-SVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 127
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 128 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 185 APESLTESKF-SVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 130
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 131 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 188 APESLTESKF-SVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 127
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 128 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 185 APESLTESKF-SVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 132
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 133 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 189
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 190 APESLTESKF-SVASDVWSFGVVLYELFT 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 145
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 146 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 203 APESLTESKF-SVASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 134
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 135 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 191
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 192 APESLTESKF-SVASDVWSFGVVLYELFT 219
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 11/213 (5%)
Query: 3 ALEELKMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVL 60
+L++ +M D ++ +G F VY + + ++E + FL E +V+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 61 LRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDI 120
+ HPNLV LLG C + ++ E++ +L D + Q + + L +A I
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQI 118
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKG 180
+ A+EYL + IHRD+ + N L+ +++ K+ADFGL +L + K
Sbjct: 119 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKF 172
Query: 181 SFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L S KSDV++FGVLL E+ T
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 145
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 146 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 203 APESLTESKF-SVASDVWSFGVVLYELFT 230
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 126
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + P K +
Sbjct: 127 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP---AGAKFPIKWT 180
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 3 ALEELKMATNDFRIR--IGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVL 60
+L++ +M D ++ +G G VY + + ++E + FL E +V+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 61 LRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDI 120
+ HPNLV LLG C + +++E++ +L D + Q + + L +A I
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQI 118
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKG 180
+ A+EYL + IHRD+ + N L+ +++ K+ADFGL +L + K
Sbjct: 119 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKF 172
Query: 181 SFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L S KSDV++FGVLL E+ T
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 127
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + P K +
Sbjct: 128 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP---AGAKFPIKWT 181
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ AVK +++ S FL E +++ ++ H LV L
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 81 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 133
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++NIL+ D K+ADFGL +L + N + K + +N G +
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 240
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 241 LYQLMRLC 248
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ AVK +++ S FL E +++ ++ H LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 131
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++NIL+ D K+ADFGL +L + N + K + +N G +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 238
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 239 LYQLMRLC 246
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ AVK +++ S FL E +++ ++ H LV L
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 80 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 132
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++NIL+ D K+ADFGL +L + N + K + +N G +
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 239
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 240 LYQLMRLC 247
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ AVK +++ S FL E +++ ++ H LV L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 85 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 137
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++NIL+ D K+ADFGL +L + N + K + +N G +
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 244
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 245 LYQLMRLC 252
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ +G+ + +++ S FL E +++ ++ H LV L
Sbjct: 29 RLGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 88 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 140
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++NIL+ D K+ADFGL +L + N + K + +N G +
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 247
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 248 LYQLMRLC 255
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ AVK +++ S FL E +++ ++ H LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 131
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++NIL+ D K+ADFGL +L + N + K + +N G +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 238
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 239 LYQLMRLC 246
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ +G+ + +++ S FL E +++ ++ H LV L
Sbjct: 28 RLGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 87 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 139
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++NIL+ D K+ADFGL +L + N + K + +N G +
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 246
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 247 LYQLMRLC 254
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 13/201 (6%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + V + F +EV VL + H N++ +G+
Sbjct: 19 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
K + ++ ++ SL+ +H S + IA AR ++YLH+++ II
Sbjct: 79 -KPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKS---II 130
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL---NTG 193
HRD+KS+NI L +DN K+ DFGL + + Q S GS ++ + ++
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS--GSILWMAPEVIRMQDSN 188
Query: 194 FVSTKSDVYSFGVLLLELITG 214
S +SDVY+FG++L EL+TG
Sbjct: 189 PYSFQSDVYAFGIVLYELMTG 209
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ AVK +++ S FL E +++ ++ H LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 131
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++NIL+ D K+ADFGL +L D R+ + K + +N G +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGA-KFPIKWTAPEAINYGTFT 188
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 238
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 239 LYQLMRLC 246
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ AVK +++ S FL E +++ ++ H LV L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 85 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 137
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++NIL+ D K+ADFGL +L D R+ + K + +N G +
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGA-KFPIKWTAPEAINYGTFT 194
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 244
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 245 LYQLMRLC 252
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ AVK +++ S FL E +++ ++ H LV L
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 84 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 136
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++NIL+ D K+ADFGL +L D R+ + K + +N G +
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGA-KFPIKWTAPEAINYGTFT 193
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 194 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 243
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 244 LYQLMRLC 251
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 120/248 (48%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ +G+ + +++ S FL E +++ ++ H LV L
Sbjct: 30 RLGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 89 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 141
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++NIL+ D K+ADFGL +L D R+ + K + +N G +
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGA-KFPIKWTAPEAINYGTFT 198
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 248
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 249 LYQLMRLC 256
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 16 IRIGVGATSFVYLAEL-GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
I+IG G+T V +A + G AVK++ + R++ +EV ++ H N+V +
Sbjct: 35 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 94
Query: 75 CLEKGEQLLLLEYLANKSLFDRM-HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L E +++E+L +L D + HT + ++ L + +AL LH+Q
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQG-- 145
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
+IHRDIKS +ILL D KL+DFG C P R+ + G+ ++ ++
Sbjct: 146 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----RRKXLVGTPYWMAPELISRL 200
Query: 194 FVSTKSDVYSFGVLLLELITG 214
+ D++S G++++E++ G
Sbjct: 201 PYGPEVDIWSLGIMVIEMVDG 221
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 16 IRIGVGATSFVYLAEL-GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
I+IG G+T V +A + G AVK++ + R++ +EV ++ H N+V +
Sbjct: 37 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 96
Query: 75 CLEKGEQLLLLEYLANKSLFDRM-HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L E +++E+L +L D + HT + ++ L + +AL LH+Q
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQG-- 147
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
+IHRDIKS +ILL D KL+DFG C P R+ + G+ ++ ++
Sbjct: 148 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----RRKXLVGTPYWMAPELISRL 202
Query: 194 FVSTKSDVYSFGVLLLELITG 214
+ D++S G++++E++ G
Sbjct: 203 PYGPEVDIWSLGIMVIEMVDG 223
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 16 IRIGVGATSFVYLAEL-GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
I+IG G+T V +A + G AVK++ + R++ +EV ++ H N+V +
Sbjct: 26 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 75 CLEKGEQLLLLEYLANKSLFDRM-HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L E +++E+L +L D + HT + ++ L + +AL LH+Q
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQG-- 136
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
+IHRDIKS +ILL D KL+DFG C P R+ + G+ ++ ++
Sbjct: 137 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----RRKXLVGTPYWMAPELISRL 191
Query: 194 FVSTKSDVYSFGVLLLELITG 214
+ D++S G++++E++ G
Sbjct: 192 PYGPEVDIWSLGIMVIEMVDG 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + +++E++ +L D + Q + + L +A I+ A+E
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 126
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 127 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKWT 180
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 12 NDFRIR--IGVGATSFVYLAELGDGNFG-AVKRV-MEERGGSRKIFLDEVSVLLRVSHPN 67
+D+ ++ IG GAT+ V A A+KR+ +E+ S L E+ + + HPN
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQ---SLGVLSWSNRLSIALDIARAL 124
+V + K E L+++ L+ S+ D + + GVL S +I ++ L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCK-LGPFNDPNRPKRQTSIKGSFG 183
EYLH IHRD+K+ NILL +D ++ADFG+ L D R K + + G+
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 184 YVDTNYLNT--GFVSTKSDVYSFGVLLLELITG 214
++ + G+ K+D++SFG+ +EL TG
Sbjct: 187 WMAPEVMEQVRGY-DFKADIWSFGITAIELATG 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 12 NDFRIR--IGVGATSFVYLAELGDGNFG-AVKRV-MEERGGSRKIFLDEVSVLLRVSHPN 67
+D+ ++ IG GAT+ V A A+KR+ +E+ S L E+ + + HPN
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQ---SLGVLSWSNRLSIALDIARAL 124
+V + K E L+++ L+ S+ D + + GVL S +I ++ L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCK-LGPFNDPNRPKRQTSIKGSFG 183
EYLH IHRD+K+ NILL +D ++ADFG+ L D R K + + G+
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 184 YVDTNYLNT--GFVSTKSDVYSFGVLLLELITG 214
++ + G+ K+D++SFG+ +EL TG
Sbjct: 192 WMAPEVMEQVRGY-DFKADIWSFGITAIELATG 223
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ AVK +++ S FL E +++ ++ H LV L
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 74 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 126
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++NIL+ D K+ADFGL +L D R+ + K + +N G +
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGA-KFPIKWTAPEAINYGTFT 183
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 184 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 233
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 234 LYQLMRLC 241
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 16 IRIGVGATSFVYLAEL-GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
I+IG G+T V +A + G AVK++ + R++ +EV ++ H N+V +
Sbjct: 30 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 89
Query: 75 CLEKGEQLLLLEYLANKSLFDRM-HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L E +++E+L +L D + HT + ++ L + +AL LH+Q
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQG-- 140
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
+IHRDIKS +ILL D KL+DFG C P R+ + G+ ++ ++
Sbjct: 141 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----RRKXLVGTPYWMAPELISRL 195
Query: 194 FVSTKSDVYSFGVLLLELITG 214
+ D++S G++++E++ G
Sbjct: 196 PYGPEVDIWSLGIMVIEMVDG 216
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 127
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 128 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY 184
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 185 APESLTESKF-SVASDVWSFGVVLYELFT 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 16 IRIGVGATSFVYLAEL-GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
I+IG G+T V +A + G AVK++ + R++ +EV ++ H N+V +
Sbjct: 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 216
Query: 75 CLEKGEQLLLLEYLANKSLFDRM-HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L E +++E+L +L D + HT + ++ L + +AL LH+Q
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQG-- 267
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
+IHRDIKS +ILL D KL+DFG C P R+ + G+ ++ ++
Sbjct: 268 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----RRKXLVGTPYWMAPELISRL 322
Query: 194 FVSTKSDVYSFGVLLLELITG 214
+ D++S G++++E++ G
Sbjct: 323 PYGPEVDIWSLGIMVIEMVDG 343
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 33/220 (15%)
Query: 22 ATSFVYLAELGDGNFGAVKRVMEERGG-SRKIFLDEV------------------SVLLR 62
+ F L LG G+FG V V + G +R+++ +V +L+
Sbjct: 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 63 VSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIA 121
V+HP +V L +G+ L+L++L LF R+ S V+ + L ++A
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELA 136
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL++LHS II+RD+K NILL ++ H KL DFGL K + K+ S G+
Sbjct: 137 LALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSFCGT 189
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
Y+ +N + +D +SFGVL+ E++TG QG
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 33/219 (15%)
Query: 23 TSFVYLAELGDGNFGAVKRVMEERGG-SRKIFLDEV------------------SVLLRV 63
+ F L LG G+FG V V + G +R+++ +V +L+ V
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIAR 122
+HP +V L +G+ L+L++L LF R+ S V+ + L ++A
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELAL 138
Query: 123 ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSF 182
AL++LHS II+RD+K NILL ++ H KL DFGL K + K+ S G+
Sbjct: 139 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSFCGTV 191
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
Y+ +N + +D +SFGVL+ E++TG QG
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 230
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 28/207 (13%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
Y+++LG GNFG AVK++ ++ F E+ +L + +
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
V G G Q L++EYL + L D + + + L S L + I + +EY
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEY 142
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
L S+ +HRD+ + NIL+ + H K+ADFGL KL P + R+ F Y
Sbjct: 143 LGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 199
Query: 187 TNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L+ S +SDV+SFGV+L EL T
Sbjct: 200 ES-LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 16 IRIGVGATSFVYLAEL-GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
I+IG G+T V +A + G AVK++ + R++ +EV ++ H N+V +
Sbjct: 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 139
Query: 75 CLEKGEQLLLLEYLANKSLFDRM-HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L E +++E+L +L D + HT + ++ L + +AL LH+Q
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQG-- 190
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
+IHRDIKS +ILL D KL+DFG C P R+ + G+ ++ ++
Sbjct: 191 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----RRKXLVGTPYWMAPELISRL 245
Query: 194 FVSTKSDVYSFGVLLLELITG 214
+ D++S G++++E++ G
Sbjct: 246 PYGPEVDIWSLGIMVIEMVDG 266
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
Y+++LG GNFG AVK++ ++ F E+ +L + +
Sbjct: 11 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 70
Query: 69 VGLLGFCLEKG--EQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
V G G E L++EYL + L D + + + L S L + I + +EY
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEY 126
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
L S+ +HRD+ + NIL+ + H K+ADFGL KL P + R+ F Y
Sbjct: 127 LGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 187 TNYLNTGFVSTKSDVYSFGVLLLELITGL-KSIQGSATL 224
+ L+ S +SDV+SFGV+L EL T KS SA
Sbjct: 184 ES-LSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 221
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + +++E++ +L D + Q + + L +A I+ A+E
Sbjct: 74 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 130
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 131 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
Y+++LG GNFG AVK++ ++ F E+ +L + +
Sbjct: 15 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 74
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
V G G Q L++EYL + L D + + + L S L + I + +EY
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEY 130
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
L S+ +HRD+ + NIL+ + H K+ADFGL KL P + R+ F Y
Sbjct: 131 LGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 187
Query: 187 TNYLNTGFVSTKSDVYSFGVLLLELITGL-KSIQGSATL 224
+ L+ S +SDV+SFGV+L EL T KS SA
Sbjct: 188 ES-LSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
Y+++LG GNFG AVK++ ++ F E+ +L + +
Sbjct: 14 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 73
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
V G G Q L++EYL + L D + + + L S L + I + +EY
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEY 129
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
L S+ +HRD+ + NIL+ + H K+ADFGL KL P + R+ F Y
Sbjct: 130 LGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 187 TNYLNTGFVSTKSDVYSFGVLLLELITGL-KSIQGSATL 224
+ L+ S +SDV+SFGV+L EL T KS SA
Sbjct: 187 ES-LSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 224
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 33/219 (15%)
Query: 23 TSFVYLAELGDGNFGAVKRVMEERGG-SRKIFLDEV------------------SVLLRV 63
+ F L LG G+FG V V + G +R+++ +V +L+ V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIAR 122
+HP +V L +G+ L+L++L LF R+ S V+ + L ++A
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELAL 137
Query: 123 ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSF 182
AL++LHS II+RD+K NILL ++ H KL DFGL K + K+ S G+
Sbjct: 138 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSFCGTV 190
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
Y+ +N + +D +SFGVL+ E++TG QG
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + +++E++ +L D + Q + + L +A I+ A+E
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAME 125
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 126 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 179
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
L S KSDV++FGVLL E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + +++E++ +L D + Q + + L +A I+ A+E
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAME 125
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 126 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 179
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 11/213 (5%)
Query: 3 ALEELKMATNDFRIR--IGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVL 60
+L++ +M D ++ +G G VY + + ++E + FL E +V+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 61 LRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDI 120
+ HPNLV LLG C + ++ E++ +L D + Q + + L +A I
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQI 118
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKG 180
+ A+EYL + IHRD+ + N L+ +++ K+ADFGL +L + K
Sbjct: 119 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTFTAHAGAKF 172
Query: 181 SFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L S KSDV++FGVLL E+ T
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 130
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 131 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTXTAHAGAKFPIKWT 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 3 ALEELKMATNDFRIR--IGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVL 60
++++ +M D ++ +G G VY+ + + ++E + FL E +V+
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 82
Query: 61 LRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDI 120
+ HPNLV LLG C + ++ EY+ +L D + + + + L +A I
Sbjct: 83 KEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVV---LLYMATQI 139
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKG 180
+ A+EYL + IHRD+ + N L+ +++ K+ADFGL +L + K
Sbjct: 140 SSAMEYLEKKN---FIHRDLAARNCLVGENHVVKVADFGLSRL---MTGDTYTAHAGAKF 193
Query: 181 SFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ L S KSDV++FGVLL E+ T G+ G
Sbjct: 194 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 234
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 100/233 (42%), Gaps = 24/233 (10%)
Query: 12 NDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLLRVSH 65
DF I +G F VYLA F +V+ E+ G EV + + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PN++ L G+ + L+LEY +++ + Q L + ++A AL
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANALS 126
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y HS+ +IHRDIK N+LL + K+ADFG P + R+T++ G+ Y+
Sbjct: 127 YCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSS------RRTTLCGTLDYL 177
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
+ K D++S GVL E + G+ + + E RR VE
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT----YQETYRRISRVE 226
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + V + F +EV VL + H N++ +G+
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
K + ++ ++ SL+ +H S + IA AR ++YLH+++ II
Sbjct: 91 -KPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL---NTG 193
HRD+KS+NI L +DN K+ DFGL + Q S GS ++ + ++
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS--GSILWMAPEVIRMQDSN 200
Query: 194 FVSTKSDVYSFGVLLLELITG 214
S +SDVY+FG++L EL+TG
Sbjct: 201 PYSFQSDVYAFGIVLYELMTG 221
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY ++ + Q L + ++A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQRTATYITELA 123
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T++ G+
Sbjct: 124 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTTLCGT 174
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 227
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++EYL SL D + H + +L ++++ I + +
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 128
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHR++ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 129 EYLGTKR---YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY 185
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 186 APESLTESKF-SVASDVWSFGVVLYELFT 213
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 130
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 131 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 72
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 129
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 130 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 183
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 219
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ AVK +++ S FL E +++ ++ H LV L
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ EY+ N SL D + T G L + + L +A IA + ++ + I
Sbjct: 75 QE-PIYIITEYMENGSLVDFLKTPSGIKLTI---NKLLDMAAQIAEGMAFIEERN---YI 127
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HR+++++NIL+ D K+ADFGL +L D R+ + K + +N G +
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGA-KFPIKWTAPEAINYGTFT 184
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVWAQMLDPKLNGDANMEQ 256
KSDV+SFG+LL E++T + T E + N+E +M+ P D E+
Sbjct: 185 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------NLERGYRMVRP----DNCPEE 234
Query: 257 LRVLIRIC 264
L L+R+C
Sbjct: 235 LYQLMRLC 242
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAME 125
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 126 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 179
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 125
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 126 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 179
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 32/209 (15%)
Query: 27 YLAELGDGNFG------------------AVKRVMEERGGSRKIFLDEVSVLLRVSHPNL 68
+L +LG GNFG AVK++ + F E+ +L + H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
V G C G + L++E+L SL + + H + +L ++++ I + +
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQ------ICKGM 130
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL ++ IHRD+ + NIL+ ++N K+ DFGL K+ P + ++ F Y
Sbjct: 131 EYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F S SDV+SFGV+L EL T
Sbjct: 188 APESLTESKF-SVASDVWSFGVVLYELFT 215
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 119
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T++ G+
Sbjct: 120 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSS------RRTTLSGT 170
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 223
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 9/208 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAME 125
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 126 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 179
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
L S KSDV++FGVLL E+ T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 130
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 131 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 127
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 128 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 181
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 125
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 126 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 179
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 81
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 82 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 138
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 139 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 192
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 193 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 228
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 127
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 128 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 181
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAME 130
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHRD+ + N L+ +++ K+ADFGL +L + K +
Sbjct: 131 YLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 144
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T++ G+
Sbjct: 145 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTTLCGT 195
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 248
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 117
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T++ G+
Sbjct: 118 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTTLCGT 168
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 221
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 118
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T++ G+
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTTLCGT 169
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 222
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 121
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T++ G+
Sbjct: 122 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTTLCGT 172
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 225
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 122
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T++ G+
Sbjct: 123 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTTLCGT 173
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 226
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 20/221 (9%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 21 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 80
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 135
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T++ G+
Sbjct: 136 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTTLCGT 186
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
Y+ + K D++S GVL E + G + +
Sbjct: 187 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 227
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 29/217 (13%)
Query: 13 DFRIRIGVGATSFVYLAEL-GDGNFGAVKRVM--EERGGSRKI-----FLDEVSVLLRVS 64
++ +IG G V+ L D + A+K ++ + G + I F EV ++ ++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARAL 124
HPN+V L G L +++E++ L+ R+ + WS +L + LDIA +
Sbjct: 82 HPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL----DKAHPIKWSVKLRLMLDIALGI 135
Query: 125 EYLHSQADPPIIHRDIKSSNILL--IDDNH---AKLADFGLCKLGPFNDPNRPKRQTSIK 179
EY+ +Q +PPI+HRD++S NI L +D+N AK+ADFGL + + +
Sbjct: 136 EYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-------QSVHSVSGLL 187
Query: 180 GSFGYVDTNYLNTGFVS--TKSDVYSFGVLLLELITG 214
G+F ++ + S K+D YSF ++L ++TG
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 103
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
FC + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 104 -FCFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R G+ YV L
Sbjct: 158 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFVGTAQYVSPELLT 212
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 121
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T++ G+
Sbjct: 122 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTTLCGT 172
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 225
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 123
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T++ G+
Sbjct: 124 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTTLCGT 174
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 227
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 118
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T + G+
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTELCGT 169
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 222
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + V + F +EV VL + H N++ +G+
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 77 EKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
QL ++ ++ SL+ +H S + IA AR ++YLH+++ I
Sbjct: 91 --APQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL---NT 192
IHRD+KS+NI L +DN K+ DFGL + Q S GS ++ + ++
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS--GSILWMAPEVIRMQDS 199
Query: 193 GFVSTKSDVYSFGVLLLELITG 214
S +SDVY+FG++L EL+TG
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTG 221
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 118
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T + G+
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTXLCGT 169
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 222
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 115
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T++ G+
Sbjct: 116 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTTLCGT 166
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 167 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 219
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 118
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T + G+
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTDLCGT 169
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 222
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 118
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T + G+
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTDLCGT 169
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 222
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 19/223 (8%)
Query: 6 ELKMATNDFRIRIGVGATSF--VYLAELGDGN-FGAVKRVMEE---RGGSRKIFLDEVSV 59
++K+ DF + +G SF V+LAE N F A+K + ++ + + E V
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 60 L-LRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
L L HP L + K ++EYL L Y+ QS S A
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL-----MYHIQSCHKFDLSRATFYAA 126
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+I L++LHS+ I++RD+K NILL D H K+ADFG+CK D +
Sbjct: 127 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD----AKTNEF 179
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
G+ Y+ L + D +SFGVLL E++ G G
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 222
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 123
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T++ G+
Sbjct: 124 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTTLCGT 174
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 227
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 119
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T + G+
Sbjct: 120 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTDLCGT 170
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 223
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY ++ + Q L + ++A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQRTATYITELA 123
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+ + G+
Sbjct: 124 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRXXLXGT 174
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 227
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 123
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+T + G+
Sbjct: 124 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRTDLCGT 174
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 227
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 24/233 (10%)
Query: 12 NDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLLRVSH 65
DF I +G F VYLA F +V+ E+ G EV + + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PN++ L G+ + L+LEY +++ + Q L + ++A AL
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANALS 126
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y HS+ +IHRDIK N+LL + K+ADFG P + R+ ++ G+ Y+
Sbjct: 127 YCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSS------RRDTLCGTLDYL 177
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
+ K D++S GVL E + G+ + + E RR VE
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT----YQETYRRISRVE 226
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 99 -FTFQDDEKLYFGLSYAKNGCLLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R S G+ YV L
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANSFVGTAQYVSPELLT 207
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
S SD+++ G ++ +L+ GL +
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCLE-KGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 129
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ ++YL S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 130 ----TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 182
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 183 YDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGSRKI--------------------FLDEVSV 59
+G L +LGDG+FG V+R + + + F+ EV+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSL-GVLSWSNRLSIAL 118
+ + H NL+ L G L +++ E SL DR+ + G L G LS A+
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS-----RYAV 118
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+A + YL S+ IHRD+ + N+LL + K+ DFGL + P ND + Q
Sbjct: 119 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQND-DHXVMQEHR 174
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K F + L T S SD + FGV L E+ T
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGSRKI--------------------FLDEVSV 59
+G L +LGDG+FG V+R + + + F+ EV+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSL-GVLSWSNRLSIAL 118
+ + H NL+ L G L +++ E SL DR+ + G L G LS A+
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS-----RYAV 128
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+A + YL S+ IHRD+ + N+LL + K+ DFGL + P ND + Q
Sbjct: 129 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQND-DHXVMQEHR 184
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K F + L T S SD + FGV L E+ T
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 20/221 (9%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA + F +V+ E+ G EV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 118
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+ ++ G+
Sbjct: 119 NALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRAALCGT 169
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
Y+ + K D++S GVL E + G + +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGSRKI--------------------FLDEVSV 59
+G L +LGDG+FG V+R + + + F+ EV+
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSL-GVLSWSNRLSIAL 118
+ + H NL+ L G L +++ E SL DR+ + G L G LS A+
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS-----RYAV 122
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+A + YL S+ IHRD+ + N+LL + K+ DFGL + P ND + Q
Sbjct: 123 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQND-DHYVMQEHR 178
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K F + L T S SD + FGV L E+ T
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 41/239 (17%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFGAV-KRVMEERGGSRKI---------------- 52
A N ++RI + T + LG G FG V K + G + KI
Sbjct: 26 APNQAQLRI-LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN 84
Query: 53 --FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTY---YGQSLGV 107
F+DE ++ + HP+LV LLG CL QL+ + + + L + +H + G L +
Sbjct: 85 VEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQL-L 142
Query: 108 LSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL--GP 165
L+W + IA+ + YL + ++HRD+ + N+L+ NH K+ DFGL +L G
Sbjct: 143 LNW------CVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 193
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQGSAT 223
+ N + IK ++ ++ + +SDV+S+GV + EL+T G K G T
Sbjct: 194 EKEYNADGGKMPIK----WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 248
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 118
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+ ++ G+
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRAALCGT 169
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 222
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 121
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+A+FG P + R+T++ G+
Sbjct: 122 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSS------RRTTLCGT 172
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 225
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGSRKI--------------------FLDEVSV 59
+G L +LGDG+FG V+R + + + F+ EV+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSL-GVLSWSNRLSIAL 118
+ + H NL+ L G L +++ E SL DR+ + G L G LS A+
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS-----RYAV 128
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+A + YL S+ IHRD+ + N+LL + K+ DFGL + P ND + Q
Sbjct: 129 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQND-DHYVMQEHR 184
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K F + L T S SD + FGV L E+ T
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGSRKI--------------------FLDEVSV 59
+G L +LGDG+FG V+R + + + F+ EV+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSL-GVLSWSNRLSIAL 118
+ + H NL+ L G L +++ E SL DR+ + G L G LS A+
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS-----RYAV 118
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+A + YL S+ IHRD+ + N+LL + K+ DFGL + P ND + Q
Sbjct: 119 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQND-DHYVMQEHR 174
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K F + L T S SD + FGV L E+ T
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 24/242 (9%)
Query: 3 ALEELKMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDE 56
A+ + A DF I +G F VYLA F +V+ E+ G E
Sbjct: 2 AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 57 VSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSI 116
V + + HPN++ L G+ + L+LEY +++ + Q L +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATY 116
Query: 117 ALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT 176
++A AL Y HS+ +IHRDIK N+LL K+ADFG P + R+
Sbjct: 117 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRA 167
Query: 177 SIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
++ G+ Y+ + K D++S GVL E + G + + + E +R
Sbjct: 168 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISR 223
Query: 237 VE 238
VE
Sbjct: 224 VE 225
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGSRKI--------------------FLDEVSV 59
+G L +LGDG+FG V+R + + + F+ EV+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSL-GVLSWSNRLSIAL 118
+ + H NL+ L G L +++ E SL DR+ + G L G LS A+
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS-----RYAV 118
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+A + YL S+ IHRD+ + N+LL + K+ DFGL + P ND + Q
Sbjct: 119 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQND-DHYVMQEHR 174
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K F + L T S SD + FGV L E+ T
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 29/217 (13%)
Query: 13 DFRIRIGVGATSFVYLAEL-GDGNFGAVKRVM--EERGGSRKI-----FLDEVSVLLRVS 64
++ +IG G V+ L D + A+K ++ + G + I F EV ++ ++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARAL 124
HPN+V L G L +++E++ L+ R+ + WS +L + LDIA +
Sbjct: 82 HPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL----DKAHPIKWSVKLRLMLDIALGI 135
Query: 125 EYLHSQADPPIIHRDIKSSNILL--IDDNH---AKLADFGLCKLGPFNDPNRPKRQTSIK 179
EY+ +Q +PPI+HRD++S NI L +D+N AK+ADFG + + +
Sbjct: 136 EYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-------QSVHSVSGLL 187
Query: 180 GSFGYVDTNYLNTGFVS--TKSDVYSFGVLLLELITG 214
G+F ++ + S K+D YSF ++L ++TG
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 30 ELGDGNFG--------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLVGLLGF 74
++G GNFG AVK E K FL E +L + SHPN+V L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 75 CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPP 134
C +K +++E + + T G L V L + D A +EYL S+
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRT-EGARLRV---KTLLQMVGDAAAGMEYLESKC--- 233
Query: 135 IIHRDIKSSNILLIDDNHAKLADFGLCK--LGPFNDPNRPKRQTSIKGSFGYVDTNYLNT 192
IHRD+ + N L+ + N K++DFG+ + + RQ +K + LN
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK----WTAPEALNY 289
Query: 193 GFVSTKSDVYSFGVLLLELIT 213
G S++SDV+SFG+LL E +
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 41/239 (17%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFGAV-KRVMEERGGSRKI---------------- 52
A N ++RI + T + LG G FG V K + G + KI
Sbjct: 3 APNQAQLRI-LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN 61
Query: 53 --FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTY---YGQSLGV 107
F+DE ++ + HP+LV LLG CL QL+ + + + L + +H + G L +
Sbjct: 62 VEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQL-L 119
Query: 108 LSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL--GP 165
L+W + IA+ + YL + ++HRD+ + N+L+ NH K+ DFGL +L G
Sbjct: 120 LNW------CVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 170
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQGSAT 223
+ N + IK ++ ++ + +SDV+S+GV + EL+T G K G T
Sbjct: 171 EKEYNADGGKMPIK----WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 225
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 120
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+A+FG P + R+T++ G+
Sbjct: 121 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSS------RRTTLCGT 171
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 224
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGSRKI--------------------FLDEVSV 59
+G L +LGDG+FG V+R + + + F+ EV+
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSL-GVLSWSNRLSIAL 118
+ + H NL+ L G L +++ E SL DR+ + G L G LS A+
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLS-----RYAV 122
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+A + YL S+ IHRD+ + N+LL + K+ DFGL + P ND + Q
Sbjct: 123 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQND-DHYVMQEHR 178
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K F + L T S SD + FGV L E+ T
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 275
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV---LLYMATQISSAME 332
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHR++ + N L+ +++ K+ADFGL +L + K +
Sbjct: 333 YLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 386
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 422
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCLE-KGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 130
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ ++YL S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 131 ----TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 183
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 184 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 92/195 (47%), Gaps = 13/195 (6%)
Query: 32 GDGNFGAVKRVMEERGGS-RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQ--LLLLEYL 88
G G AVK + + G R + E+ +L + H +++ G C ++GE+ L++EY+
Sbjct: 41 GTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 89 ANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLI 148
SL D + + S+G+ + L A I + YLHSQ IHR++ + N+LL
Sbjct: 101 PLGSLRDYLPRH---SIGL---AQLLLFAQQICEGMAYLHSQH---YIHRNLAARNVLLD 151
Query: 149 DDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLL 208
+D K+ DFGL K P R+ F Y F SDV+SFGV L
Sbjct: 152 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA-SDVWSFGVTL 210
Query: 209 LELITGLKSIQGSAT 223
EL+T S Q T
Sbjct: 211 YELLTHCDSSQSPPT 225
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 29/217 (13%)
Query: 13 DFRIRIGVGATSFVYLAEL-GDGNFGAVKRVM--EERGGSRKI-----FLDEVSVLLRVS 64
++ +IG G V+ L D + A+K ++ + G + I F EV ++ ++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARAL 124
HPN+V L G L +++E++ L+ R+ + WS +L + LDIA +
Sbjct: 82 HPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL----DKAHPIKWSVKLRLMLDIALGI 135
Query: 125 EYLHSQADPPIIHRDIKSSNILL--IDDNH---AKLADFGLCKLGPFNDPNRPKRQTSIK 179
EY+ +Q +PPI+HRD++S NI L +D+N AK+ADF L + + +
Sbjct: 136 EYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-------QSVHSVSGLL 187
Query: 180 GSFGYVDTNYLNTGFVS--TKSDVYSFGVLLLELITG 214
G+F ++ + S K+D YSF ++L ++TG
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 19/223 (8%)
Query: 6 ELKMATNDFRIRIGVGATSF--VYLAELGDGN-FGAVKRVMEE---RGGSRKIFLDEVSV 59
++K+ DF + +G SF V+LAE N F A+K + ++ + + E V
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 60 L-LRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
L L HP L + K ++EYL L Y+ QS S A
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL-----MYHIQSCHKFDLSRATFYAA 125
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+I L++LHS+ I++RD+K NILL D H K+ADFG+CK D +
Sbjct: 126 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD----AKTNXF 178
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
G+ Y+ L + D +SFGVLL E++ G G
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 22/198 (11%)
Query: 28 LAELGDGNFGAVK------------RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFC 75
L ELG G FG VK ++++E S F E ++++SHP LV G C
Sbjct: 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
++ ++ EY++N L + + + +G+ L S L + D+ + +L S
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRS-HGKGLEP---SQLLEMCYDVCEGMAFLESHQ---F 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFV 195
IHRD+ + N L+ D K++DFG+ + + ++ K + +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTR---YVLDDQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 196 STKSDVYSFGVLLLELIT 213
S+KSDV++FG+L+ E+ +
Sbjct: 183 SSKSDVWAFGILMWEVFS 200
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCL-EKGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 91 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 148
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ ++YL S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 149 ----TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 201
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 202 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 125/265 (47%), Gaps = 34/265 (12%)
Query: 13 DFRI--RIGVGATSFVYLAE-LGDGNFGAVKRV-----MEERGGSRKIFLDEVSVLLRVS 64
+FRI +IG G S VY A L DG A+K+V M+ + +R + E+ +L +++
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK--ARADCIKEIDLLKQLN 90
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARAL 124
HPN++ +E E ++LE LA+ RM ++ + ++ + + AL
Sbjct: 91 HPNVIKYYASFIEDNELNIVLE-LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
E++HS+ ++HRDIK +N+ + KL D GL + F+ ++ S+ G+ Y
Sbjct: 150 EHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRF--FS--SKTTAAHSLVGTPYY 202
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA----TLAEWTEECRRNKNVEVW 240
+ ++ + KSD++S G LL E+ G +L + E+C
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY------- 255
Query: 241 AQMLDPKLNGDANMEQLRVLIRICM 265
P L D E+LR L+ +C+
Sbjct: 256 -----PPLPSDHYSEELRQLVNMCI 275
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCL-EKGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 70 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 127
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ ++YL S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 128 ----TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 180
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 181 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 30 ELGDGNFG--------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLVGLLGF 74
++G GNFG AVK E K FL E +L + SHPN+V L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 75 CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPP 134
C +K +++E + + T G L V L + D A +EYL S+
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRT-EGARLRV---KTLLQMVGDAAAGMEYLESKC--- 233
Query: 135 IIHRDIKSSNILLIDDNHAKLADFGLCK--LGPFNDPNRPKRQTSIKGSFGYVDTNYLNT 192
IHRD+ + N L+ + N K++DFG+ + + RQ +K + LN
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK----WTAPEALNY 289
Query: 193 GFVSTKSDVYSFGVLLLELIT 213
G S++SDV+SFG+LL E +
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCLE-KGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 65 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 122
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ ++YL S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 123 ----TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 175
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 176 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 119
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+ ++ G+
Sbjct: 120 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRDTLCGT 170
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 223
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCLE-KGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 68 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 125
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ ++YL S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 126 ----TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 178
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCL-EKGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 130
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ ++YL S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 131 ----TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 183
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 184 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCL-EKGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 128
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ ++YL S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 129 ----TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 181
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 182 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 9/208 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 213 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 272
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 273 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 329
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHR++ + N L+ +++ K+ADFGL +L + K +
Sbjct: 330 YLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 383
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
L S KSDV++FGVLL E+ T
Sbjct: 384 APESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCL-EKGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 129
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ ++YL S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 130 ----TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 182
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 183 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 118
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+ + G+
Sbjct: 119 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRXXLCGT 169
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 222
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 100 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R S G+ YV L
Sbjct: 154 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANSFVGTAQYVSPELLT 208
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCL-EKGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 92 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 149
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ ++YL S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 150 ----TVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 202
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 203 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 10/216 (4%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E++ + ++G G VY + + ++E + FL E +V+ + H
Sbjct: 255 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 314
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PNLV LLG C + ++ E++ +L D + Q + + L +A I+ A+E
Sbjct: 315 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV---LLYMATQISSAME 371
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + IHR++ + N L+ +++ K+ADFGL +L + K +
Sbjct: 372 YLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTYTAHAGAKFPIKWT 425
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
L S KSDV++FGVLL E+ T G+ G
Sbjct: 426 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 461
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 96 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R S G+ YV L
Sbjct: 150 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANSFVGTAQYVSPELLT 204
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 121
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+ + G+
Sbjct: 122 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRXXLCGT 172
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 225
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCL-EKGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 132 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 189
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ +++L S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 190 ----TVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 242
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCL-EKGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 130
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ +++L S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 131 ----TVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 183
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 184 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 121
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+ + G+
Sbjct: 122 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRDDLCGT 172
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 225
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCL-EKGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 131
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ +++L S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 132 ----TVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 184
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 185 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 10/197 (5%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ + AVK ++ S + FL+E +++ + H LV L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVK-TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
+ ++ EY+A SL D + + G G + + + IA + Y+ + I
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEG---GKVLLPKLIDFSAQIAEGMAYIERKN---YI 132
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++N+L+ + K+ADFGL ++ D R+ + K + +N G +
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGA-KFPIKWTAPEAINFGCFT 189
Query: 197 TKSDVYSFGVLLLELIT 213
KSDV+SFG+LL E++T
Sbjct: 190 IKSDVWSFGILLYEIVT 206
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCL-EKGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 131
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ +++L S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 132 ----TVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 184
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 185 LDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 144
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+ + G+
Sbjct: 145 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRDDLCGT 195
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 248
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCL-EKGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 130
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ +++L S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 131 ----TVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 183
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 184 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCL-EKGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 78 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 135
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ +++L S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 136 ----TVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 188
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 189 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 24/237 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
+ A DF I +G F VYLA F +V+ E+ G EV +
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ L G+ + L+LEY +++ + Q L + ++A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELA 120
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y HS+ +IHRDIK N+LL K+ADFG P + R+ + G+
Sbjct: 121 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------RRXXLCGT 171
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
Y+ + K D++S GVL E + G + + + E +R VE
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRVE 224
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 12/169 (7%)
Query: 48 GSRKIFLDEVSVLLRVSHPNLVGLLGFCL-EKGEQLLLLEYLANKSL--FDRMHTYYGQS 104
G FL E ++ SHPN++ LLG CL +G L++L Y+ + L F R T+
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-- 128
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG 164
+ + + L +A+ +++L S+ +HRD+ + N +L + K+ADFGL +
Sbjct: 129 ----TVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 181
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + +T K ++ L T +TKSDV+SFGVLL EL+T
Sbjct: 182 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 30 ELGDGNFGAVKR---------------VMEERGGSRKI---FLDEVSVLLRVSHPNLVGL 71
ELG GNFG VK+ +++ + L E +V+ ++ +P +V +
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+G C + E +L+ +A ++ Y Q+ V N + + ++ ++YL
Sbjct: 78 IGIC--EAESWMLVMEMAE---LGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE--- 128
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
+ +HRD+ + N+LL+ ++AK++DFGL K D N K QT K + +N
Sbjct: 129 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAPECIN 187
Query: 192 TGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
S+KSDV+SFGVL+ E + G K +G
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 13/195 (6%)
Query: 32 GDGNFGAVKRVMEERGGS-RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQ--LLLLEYL 88
G G AVK + + G R + E+ +L + H +++ G C ++GE+ L++EY+
Sbjct: 41 GTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 89 ANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLI 148
SL D + + S+G+ + L A I + YLH+Q IHR++ + N+LL
Sbjct: 101 PLGSLRDYLPRH---SIGL---AQLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLD 151
Query: 149 DDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLL 208
+D K+ DFGL K P R+ F Y F SDV+SFGV L
Sbjct: 152 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA-SDVWSFGVTL 210
Query: 209 LELITGLKSIQGSAT 223
EL+T S Q T
Sbjct: 211 YELLTHCDSSQSPPT 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 30 ELGDGNFGAVKR---------------VMEERGGSRKI---FLDEVSVLLRVSHPNLVGL 71
ELG GNFG VK+ +++ + L E +V+ ++ +P +V +
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+G C + E +L+ +A ++ Y Q+ V N + + ++ ++YL
Sbjct: 84 IGIC--EAESWMLVMEMAE---LGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE--- 134
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
+ +HRD+ + N+LL+ ++AK++DFGL K D N K QT K + +N
Sbjct: 135 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 193
Query: 192 TGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
S+KSDV+SFGVL+ E + G K +G
Sbjct: 194 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 8 KMATNDFRIR--IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVL 60
K DF+ +G G+ S V LA EL A+K ++E+R ++ E V+
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVM 63
Query: 61 LRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALD 119
R+ HP V L F + E+L L Y N L Y + +G + +
Sbjct: 64 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAE 117
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
I ALEYLH + IIHRD+K NILL +D H ++ DFG K+ + ++ R
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFV 172
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
G+ YV L SD+++ G ++ +L+ GL +
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 8 KMATNDFRIR--IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVL 60
K DF+ +G G+ S V LA EL A+K ++E+R ++ E V+
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVM 64
Query: 61 LRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALD 119
R+ HP V L F + E+L L Y N L Y + +G + +
Sbjct: 65 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAE 118
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
I ALEYLH + IIHRD+K NILL +D H ++ DFG K+ + ++ R
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFV 173
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
G+ YV L SD+++ G ++ +L+ GL +
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 30 ELGDGNFGAVKR---------------VMEERGGSRKI---FLDEVSVLLRVSHPNLVGL 71
ELG GNFG VK+ +++ + L E +V+ ++ +P +V +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+G C + E +L+ +A ++ Y Q+ V N + + ++ ++YL
Sbjct: 94 IGIC--EAESWMLVMEMAE---LGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN 147
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
+HRD+ + N+LL+ ++AK++DFGL K D N K QT K + +N
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 192 TGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
S+KSDV+SFGVL+ E + G K +G
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 30 ELGDGNFGAVKR---------------VMEERGGSRKI---FLDEVSVLLRVSHPNLVGL 71
ELG GNFG VK+ +++ + L E +V+ ++ +P +V +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+G C + E +L+ +A ++ Y Q+ V N + + ++ ++YL
Sbjct: 94 IGIC--EAESWMLVMEMAE---LGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN 147
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
+HRD+ + N+LL+ ++AK++DFGL K D N K QT K + +N
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 192 TGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
S+KSDV+SFGVL+ E + G K +G
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSNR 113
H N++ LLG C + G +++EY + +L + + L LS +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK 173
+S A +AR +EYL S+ IHRD+ + N+L+ +DN K+ADFGL + + + K
Sbjct: 153 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDXXK 207
Query: 174 RQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ T+ + ++ L + +SDV+SFGVLL E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 97 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R + G+ YV L
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANAFVGTAQYVSPELLT 205
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 8 KMATNDFRIR--IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVL 60
K DF+ +G G+ S V LA EL A+K ++E+R ++ E V+
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVM 62
Query: 61 LRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALD 119
R+ HP V L F + E+L L Y N L Y + +G + +
Sbjct: 63 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAE 116
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
I ALEYLH + IIHRD+K NILL +D H ++ DFG K+ + ++ R
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFV 171
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
G+ YV L SD+++ G ++ +L+ GL +
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 30 ELGDGNFGAVKR---------------VMEERGGSRKI---FLDEVSVLLRVSHPNLVGL 71
ELG GNFG VK+ +++ + L E +V+ ++ +P +V +
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+G C + E +L+ +A ++ Y Q+ V N + + ++ ++YL
Sbjct: 78 IGIC--EAESWMLVMEMAE---LGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE--- 128
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
+ +HRD+ + N+LL+ ++AK++DFGL K D N K QT K + +N
Sbjct: 129 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 187
Query: 192 TGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
S+KSDV+SFGVL+ E + G K +G
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 8 KMATNDFRIR--IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVL 60
K DF+ +G G+ S V LA EL A+K ++E+R ++ E V+
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVM 61
Query: 61 LRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALD 119
R+ HP V L F + E+L L Y N L Y + +G + +
Sbjct: 62 SRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAE 115
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
I ALEYLH + IIHRD+K NILL +D H ++ DFG K+ + ++ R
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFV 170
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
G+ YV L SD+++ G ++ +L+ GL +
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 30 ELGDGNFGAVKR---------------VMEERGGSRKI---FLDEVSVLLRVSHPNLVGL 71
ELG GNFG VK+ +++ + L E +V+ ++ +P +V +
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+G C + E +L+ +A ++ Y Q+ V N + + ++ ++YL
Sbjct: 74 IGIC--EAESWMLVMEMAE---LGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE--- 124
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
+ +HRD+ + N+LL+ ++AK++DFGL K D N K QT K + +N
Sbjct: 125 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 183
Query: 192 TGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
S+KSDV+SFGVL+ E + G K +G
Sbjct: 184 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 213
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 30 ELGDGNFGAVKR---------------VMEERGGSRKI---FLDEVSVLLRVSHPNLVGL 71
ELG GNFG VK+ +++ + L E +V+ ++ +P +V +
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+G C + E +L+ +A ++ Y Q+ V N + + ++ ++YL
Sbjct: 72 IGIC--EAESWMLVMEMAE---LGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE--- 122
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
+ +HRD+ + N+LL+ ++AK++DFGL K D N K QT K + +N
Sbjct: 123 ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 181
Query: 192 TGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
S+KSDV+SFGVL+ E + G K +G
Sbjct: 182 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 211
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 30 ELGDGNFGAVKR---------------VMEERGGSRKI---FLDEVSVLLRVSHPNLVGL 71
ELG GNFG VK+ +++ + L E +V+ ++ +P +V +
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+G C + E +L+ +A ++ Y Q+ V N + + ++ ++YL
Sbjct: 92 IGIC--EAESWMLVMEMAE---LGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN 145
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
+HRD+ + N+LL+ ++AK++DFGL K D N K QT K + +N
Sbjct: 146 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 201
Query: 192 TGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
S+KSDV+SFGVL+ E + G K +G
Sbjct: 202 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 97 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R G+ YV L
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFVGTAQYVSPELLT 205
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 97 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R G+ YV L
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFVGTAQYVSPELLT 205
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
R+G G V++ +GN + ++ S + FL+E ++ ++ H LV L
Sbjct: 16 RLGNGQFGEVWMGTW-NGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
E+ ++ EY+ SL D + G++L + N + +A +A + Y+ I
Sbjct: 75 EE-PIYIVTEYMNKGSLLDFLKDGEGRALKL---PNLVDMAAQVAAGMAYIERMN---YI 127
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++S+NIL+ + K+ADFGL +L D RQ + K + G +
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARL--IEDNEXTARQGA-KFPIKWTAPEAALYGRFT 184
Query: 197 TKSDVYSFGVLLLELIT 213
KSDV+SFG+LL EL+T
Sbjct: 185 IKSDVWSFGILLTELVT 201
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGSR-KIFLDEVSVLLRVSHPNLVGLLGFCLEK 78
V AT+F G AVK + E S + L E +VL +V+HP+++ L G C +
Sbjct: 40 VKATAFHLKGRAGYTTV-AVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 79 GEQLLLLEYLANKSL--FDRMHTYYGQSL-----------------GVLSWSNRLSIALD 119
G LL++EY SL F R G L+ + +S A
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
I++ ++YL A+ ++HRD+ + NIL+ + K++DFGL + D + Q I
Sbjct: 159 ISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIP 215
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ +++ L +T+SDV+SFGVLL E++T
Sbjct: 216 VKWMAIES--LFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 32/207 (15%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGGSRKIFL-----------------DEVSVLLRVSHPN 67
F L ++G G+FG V + ++ R ++K+ E++VL + P
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNR--TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
+ G L+ + +++EYL S D + G L + +I +I + L+YL
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYL 120
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
HS+ IHRDIK++N+LL + KLADFG+ G D + KR T + F ++
Sbjct: 121 HSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTD-TQIKRNTFVGTPF-WMAP 173
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELITG 214
+ +K+D++S G+ +EL G
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 99 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R G+ YV L
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFVGTAQYVSPELLT 207
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGSR-KIFLDEVSVLLRVSHPNLVGLLGFCLEK 78
V AT+F G AVK + E S + L E +VL +V+HP+++ L G C +
Sbjct: 40 VKATAFHLKGRAGYTTV-AVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 79 GEQLLLLEYLANKSL--FDRMHTYYGQSL-----------------GVLSWSNRLSIALD 119
G LL++EY SL F R G L+ + +S A
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
I++ ++YL A+ ++HRD+ + NIL+ + K++DFGL + D + Q I
Sbjct: 159 ISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIP 215
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ +++ L +T+SDV+SFGVLL E++T
Sbjct: 216 VKWMAIES--LFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSNR 113
H N++ LLG C + G +++EY + +L + + L LS +
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK 173
+S A +AR +EYL S+ IHRD+ + N+L+ +DN K+ADFGL + + + K
Sbjct: 146 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 200
Query: 174 RQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ T+ + ++ L + +SDV+SFGVLL E+ T
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSNR 113
H N++ LLG C + G +++EY + +L + + L LS +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK 173
+S A +AR +EYL S+ IHRD+ + N+L+ +DN K+ADFGL + + + K
Sbjct: 153 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 207
Query: 174 RQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ T+ + ++ L + +SDV+SFGVLL E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 100 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R G+ YV L
Sbjct: 154 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFVGTAQYVSPELLT 208
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 99 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R G+ YV L
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFVGTAQYVSPELLT 207
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 96 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R G+ YV L
Sbjct: 150 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFVGTAQYVSPELLT 204
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSNR 113
H N++ LLG C + G +++EY + +L + + L LS +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK 173
+S A +AR +EYL S+ IHRD+ + N+L+ +DN K+ADFGL + + + K
Sbjct: 153 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 207
Query: 174 RQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ T+ + ++ L + +SDV+SFGVLL E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSNR 113
H N++ LLG C + G +++EY + +L + + L LS +
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK 173
+S A +AR +EYL S+ IHRD+ + N+L+ +DN K+ADFGL + + + K
Sbjct: 145 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 199
Query: 174 RQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ T+ + ++ L + +SDV+SFGVLL E+ T
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 99 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R G+ YV L
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFVGTAQYVSPELLT 207
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 80
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 81 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R G+ YV L
Sbjct: 135 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFVGTAQYVSPELLT 189
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + +V++ + F +EV+VL + H N++ +G+ +
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-M 101
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
K ++ ++ SL+ +H + + IA A+ ++YLH++ II
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQETK----FQMFQLIDIARQTAQGMDYLHAKN---II 154
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL----NT 192
HRD+KS+NI L + K+ DFGL + ++ Q + GS ++ + N
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT--GSVLWMAPEVIRMQDNN 212
Query: 193 GFVSTKSDVYSFGVLLLELITG 214
F S +SDVYS+G++L EL+TG
Sbjct: 213 PF-SFQSDVYSYGIVLYELMTG 233
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSNR 113
H N++ LLG C + G +++EY + +L + + L LS +
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK 173
+S A +AR +EYL S+ IHRD+ + N+L+ +DN K+ADFGL + + + K
Sbjct: 138 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 192
Query: 174 RQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ T+ + ++ L + +SDV+SFGVLL E+ T
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 44/226 (19%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG---SRKIFLDEVSVLLR--------------VSHPN 67
F L LG G+FG V + G + K+ E+ V L+ V+HP
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS------IALDIA 121
++ + G + + ++++Y+ LF +L S R A ++
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELF-----------SLLRKSQRFPNPVAKFYAAEVC 116
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
ALEYLHS+ II+RD+K NILL + H K+ DFG K P + G+
Sbjct: 117 LALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKY-------VPDVTYXLCGT 166
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEW 227
Y+ ++T + D +SFG+L+ E++ G S T+ +
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY 212
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 103/238 (43%), Gaps = 48/238 (20%)
Query: 22 ATSFVYLAELGDGNFGAVKR-----------VMEERGGSRKI--FLDEVSVLLRVSHPNL 68
A+ F +A LG G FG V + + + R K+ L EV +L ++H +
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 69 VGLLGFCLE-------------KGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
V LE K + +EY N++L+D +H+ W
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR---- 120
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLC----------KLGP 165
+ I AL Y+HSQ IIHRD+K NI + + + K+ DFGL KL
Sbjct: 121 LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNYLN-TGFVSTKSDVYSFGVLLLELI----TGLKSI 218
N P TS G+ YV T L+ TG + K D+YS G++ E+I TG++ +
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERV 235
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 99 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R G+ YV L
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFVGTAQYVSPELLT 207
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSN 112
H N++ LLG C + G +++EY + +L + + + +++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+S +AR +EYL SQ IHRD+ + N+L+ ++N K+ADFGL + N+ +
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDXX 213
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K+ T+ + ++ L + +SDV+SFGVL+ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSNR 113
H N++ LLG C + G +++EY + +L + + L LS +
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK 173
+S A +AR +EYL S+ IHRD+ + N+L+ +DN K+ADFGL + + + K
Sbjct: 142 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 196
Query: 174 RQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ T+ + ++ L + +SDV+SFGVLL E+ T
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSNR 113
H N++ LLG C + G +++EY + +L + + L LS +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK 173
+S A +AR +EYL S+ IHRD+ + N+L+ +DN K+ADFGL + + + K
Sbjct: 153 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 207
Query: 174 RQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ T+ + ++ L + +SDV+SFGVLL E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 99 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R G+ YV L
Sbjct: 153 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFVGTAQYVSPELLT 207
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGSR-KIFLDEVSVLLRVSHPNLVGLLGFCLEK 78
V AT+F G AVK + E S + L E +VL +V+HP+++ L G C +
Sbjct: 40 VKATAFHLKGRAGYTTV-AVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 79 GEQLLLLEYLANKSL--FDRMHTYYGQSL-----------------GVLSWSNRLSIALD 119
G LL++EY SL F R G L+ + +S A
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
I++ ++YL A+ ++HRD+ + NIL+ + K++DFGL + D + Q I
Sbjct: 159 ISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIP 215
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ +++ L +T+SDV+SFGVLL E++T
Sbjct: 216 VKWMAIES--LFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRK----IFLDEVSVLLRVSHPNLVGLL 72
+G G+ S V LA EL A+K ++E+R ++ E V+ R+ HP V L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 101
Query: 73 GFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
F + E+L L Y N L Y + +G + +I ALEYLH +
Sbjct: 102 -FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
IIHRD+K NILL +D H ++ DFG K+ + ++ R G+ YV L
Sbjct: 156 ---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQARANXFVGTAQYVSPELLT 210
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQG 220
SD+++ G ++ +L+ GL +
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPPFRA 239
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 32/207 (15%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGGSRKIFL-----------------DEVSVLLRVSHPN 67
F L ++G G+FG V + ++ R ++K+ E++VL + P
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNR--TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
+ G L+ + +++EYL S D + G L + +I +I + L+YL
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYL 140
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
HS+ IHRDIK++N+LL + KLADFG+ G D + KR T + F ++
Sbjct: 141 HSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTD-TQIKRNTFVGTPF-WMAP 193
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELITG 214
+ +K+D++S G+ +EL G
Sbjct: 194 EVIKQSAYDSKADIWSLGITAIELARG 220
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 89/195 (45%), Gaps = 13/195 (6%)
Query: 32 GDGNFGAVKRVMEERGGS-RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQ--LLLLEYL 88
G G AVK + + G R + E+ +L + H +++ G C + G L++EY+
Sbjct: 58 GTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 89 ANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLI 148
SL D + + S+G+ + L A I + YLH+Q IHRD+ + N+LL
Sbjct: 118 PLGSLRDYLPRH---SIGL---AQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLD 168
Query: 149 DDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLL 208
+D K+ DFGL K P R+ F Y F SDV+SFGV L
Sbjct: 169 NDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYA-SDVWSFGVTL 227
Query: 209 LELITGLKSIQGSAT 223
EL+T S Q T
Sbjct: 228 YELLTHCDSSQSPPT 242
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 33/218 (15%)
Query: 23 TSFVYLAELGDGNFGAV---KRVMEERGGS-------RKIFLD---------EVSVLLRV 63
+ F L LG G+FG V ++V G +K L E +L V
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIAR 122
+HP +V L +G+ L+L++L LF R+ S V+ + L ++A
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELAL 141
Query: 123 ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSF 182
L++LHS II+RD+K NILL ++ H KL DFGL K + K+ S G+
Sbjct: 142 GLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK----EAIDHEKKAYSFCGTV 194
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
Y+ +N S +D +S+GVL+ E++TG QG
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQG 232
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 32 GDGNFGAVKRVMEERGGS-RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQ--LLLLEYL 88
G G AVK + E G R + E+ +L + H ++V G C ++GE+ L++EY+
Sbjct: 36 GTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 95
Query: 89 ANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLI 148
SL D + + + + L A I + YLH+Q IHR + + N+LL
Sbjct: 96 PLGSLRDYLPRH------CVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLD 146
Query: 149 DDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLL 208
+D K+ DFGL K P R+ F Y F SDV+SFGV L
Sbjct: 147 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYA-SDVWSFGVTL 205
Query: 209 LELITGLKSIQGSAT 223
EL+T S Q T
Sbjct: 206 YELLTYCDSNQSPHT 220
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSN 112
H N++ LLG C + G +++EY + +L + + + +++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+S +AR +EYL SQ IHRD+ + N+L+ ++N K+ADFGL + N+ +
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDXX 213
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K+ T+ + ++ L + +SDV+SFGVL+ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 32 GDGNFGAVKRVMEERGGS-RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQ--LLLLEYL 88
G G AVK + E G R + E+ +L + H ++V G C ++GE+ L++EY+
Sbjct: 35 GTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 94
Query: 89 ANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLI 148
SL D + + + + L A I + YLH+Q IHR + + N+LL
Sbjct: 95 PLGSLRDYLPRH------CVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLD 145
Query: 149 DDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLL 208
+D K+ DFGL K P R+ F Y F SDV+SFGV L
Sbjct: 146 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYA-SDVWSFGVTL 204
Query: 209 LELITGLKSIQGSAT 223
EL+T S Q T
Sbjct: 205 YELLTYCDSNQSPHT 219
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSNR 113
H N++ LLG C + G +++EY + +L + + L LS +
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK 173
+S A +AR +EYL S+ IHRD+ + N+L+ +DN K+ADFGL + + + K
Sbjct: 194 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYK 248
Query: 174 RQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ T+ + ++ L + +SDV+SFGVLL E+ T
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGGSRKIFLD----------------EVSVLLRVSHPNL 68
+V L ++G+G+FG V G + + + EV+VL + HPN+
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 69 VGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYG---QSLGVLSWSNRLSIALDIARALE 125
V E G ++++Y LF R++ G Q +L W + I AL+
Sbjct: 86 VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQICLALK 139
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
++H D I+HRDIKS NI L D +L DFG+ ++ N R + G+ Y+
Sbjct: 140 HVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELAR--ACIGTPYYL 192
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ KSD+++ G +L EL T
Sbjct: 193 SPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + V + F +EV VL + H N++ +G+
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 73
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
K + ++ ++ SL+ +H + + IA A+ ++YLH+++ II
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL---NTG 193
HRD+KS+NI L +D K+ DFGL + + Q S GS ++ + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSILWMAPEVIRMQDKN 184
Query: 194 FVSTKSDVYSFGVLLLELITG 214
S +SDVY+FG++L EL+TG
Sbjct: 185 PYSFQSDVYAFGIVLYELMTG 205
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 30 ELGDGNFGAVKR---------------VMEERGGSRKI---FLDEVSVLLRVSHPNLVGL 71
ELG GNFG VK+ +++ + L E +V+ ++ +P +V +
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+G C + E +L+ +A ++ Y Q+ V N + + ++ ++YL
Sbjct: 436 IGIC--EAESWMLVMEMAE---LGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN 489
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
+HRD+ + N+LL+ ++AK++DFGL K D N K QT K + +N
Sbjct: 490 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 545
Query: 192 TGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
S+KSDV+SFGVL+ E + G K +G
Sbjct: 546 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 575
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 38/212 (17%)
Query: 31 LGDGNFGAVKR--VMEERGGSRKI-----------------FLDEVSVLLRVSHPNLVGL 71
LG+G FG+V + +E G S K+ FL E + + SHPN++ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 72 LGFCLEKGEQ-----LLLLEYLANKSLFDRMHTYYGQS-----LGVLSWSNRLSIALDIA 121
LG C+E Q +++L ++ + +HTY S + L +DIA
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMK----YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
+EYL ++ +HRD+ + N +L DD +ADFGL K D R R K
Sbjct: 158 LGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIA--KMP 212
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ L ++KSDV++FGV + E+ T
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 30 ELGDGNFGAVKR---------------VMEERGGSRKI---FLDEVSVLLRVSHPNLVGL 71
ELG GNFG VK+ +++ + L E +V+ ++ +P +V +
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+G C + E +L+ +A ++ Y Q+ V N + + ++ ++YL
Sbjct: 437 IGIC--EAESWMLVMEMAE---LGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN 490
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
+HRD+ + N+LL+ ++AK++DFGL K D N K QT K + +N
Sbjct: 491 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 546
Query: 192 TGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
S+KSDV+SFGVL+ E + G K +G
Sbjct: 547 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 576
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 13 DFRIRIGVGATSFVYLAE-LGDGNFGAVKRVMEER-GGSRKIFLDEVSVLLRVSHPNLVG 70
DFR +G GA S V LAE A+K + +E G +E++VL ++ HPN+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 71 LLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
L G L+++ ++ LFDR+ G + + + + A++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRI-----VEKGFYTERDASRLIFQVLDAVKYLH-- 133
Query: 131 ADPPIIHRDIKSSNIL---LIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
D I+HRD+K N+L L +D+ ++DFGL K+ DP ++ G+ GYV
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPG--SVLSTACGTPGYVAP 187
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELITG 214
L S D +S GV+ L+ G
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 13 DFRIRIGVGATSFVYLAE-LGDGNFGAVKRVMEER-GGSRKIFLDEVSVLLRVSHPNLVG 70
DFR +G GA S V LAE A+K + +E G +E++VL ++ HPN+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 71 LLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
L G L+++ ++ LFDR+ G + + + + A++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRI-----VEKGFYTERDASRLIFQVLDAVKYLH-- 133
Query: 131 ADPPIIHRDIKSSNIL---LIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
D I+HRD+K N+L L +D+ ++DFGL K+ DP ++ G+ GYV
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPG--SVLSTACGTPGYVAP 187
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELITG 214
L S D +S GV+ L+ G
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + V + F +EV VL + H N++ +G+
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 78
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
K + ++ ++ SL+ +H + + IA A+ ++YLH+++ II
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL---NTG 193
HRD+KS+NI L +D K+ DFGL + + Q S GS ++ + +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSILWMAPEVIRMQDKN 189
Query: 194 FVSTKSDVYSFGVLLLELITG 214
S +SDVY+FG++L EL+TG
Sbjct: 190 PYSFQSDVYAFGIVLYELMTG 210
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + V + F +EV VL + H N++ +G+
Sbjct: 17 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 75
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
K + ++ ++ SL+ +H + + IA A+ ++YLH+++ II
Sbjct: 76 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 128
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL---NTG 193
HRD+KS+NI L +D K+ DFGL + + Q S GS ++ + +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSILWMAPEVIRMQDKN 186
Query: 194 FVSTKSDVYSFGVLLLELITG 214
S +SDVY+FG++L EL+TG
Sbjct: 187 PYSFQSDVYAFGIVLYELMTG 207
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + V + F +EV VL + H N++ +G+
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 78
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
K + ++ ++ SL+ +H + + IA A+ ++YLH+++ II
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL---NTG 193
HRD+KS+NI L +D K+ DFGL + + Q S GS ++ + +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSILWMAPEVIRMQDKN 189
Query: 194 FVSTKSDVYSFGVLLLELITG 214
S +SDVY+FG++L EL+TG
Sbjct: 190 PYSFQSDVYAFGIVLYELMTG 210
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 29/207 (14%)
Query: 28 LAELGDGNFG------------------AVKRVMEERGGSRKIFLD-EVSVLLRVSHPNL 68
+ +LG+G+FG AVK + E GG+ L E+ +L + H N+
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
V G C E G L++E+L + SL + Y ++ ++ +L A+ I + ++Y
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKE----YLPKNKNKINLKQQLKYAVQICKGMDY 141
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
L S+ +HRD+ + N+L+ ++ K+ DFGL K + + F Y
Sbjct: 142 LGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
Query: 187 TNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F SDV+SFGV L EL+T
Sbjct: 199 ECLMQSKFY-IASDVWSFGVTLHELLT 224
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRL 114
E V+ R+ HP V L F + E+L L Y N L Y + +G +
Sbjct: 80 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLK-----YIRKIGSFDETCTR 133
Query: 115 SIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKR 174
+I ALEYLH + IIHRD+K NILL +D H ++ DFG K+ + ++ R
Sbjct: 134 FYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV--LSPESKQAR 188
Query: 175 QTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
G+ YV L SD+++ G ++ +L+ GL +
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + V + F +EV VL + H N++ +G+
Sbjct: 42 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 100
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
K + ++ ++ SL+ +H + + IA A+ ++YLH+++ II
Sbjct: 101 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 153
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL---NTG 193
HRD+KS+NI L +D K+ DFGL + + Q S GS ++ + +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSILWMAPEVIRMQDKN 211
Query: 194 FVSTKSDVYSFGVLLLELITG 214
S +SDVY+FG++L EL+TG
Sbjct: 212 PYSFQSDVYAFGIVLYELMTG 232
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + V + F +EV VL + H N++ +G+
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 101
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
K + ++ ++ SL+ +H + + IA A+ ++YLH+++ II
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL---NTG 193
HRD+KS+NI L +D K+ DFGL + + Q S GS ++ + +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSILWMAPEVIRMQDKN 212
Query: 194 FVSTKSDVYSFGVLLLELITG 214
S +SDVY+FG++L EL+TG
Sbjct: 213 PYSFQSDVYAFGIVLYELMTG 233
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 13 DFRIRIGVGATSFVYLAE-LGDGNFGAVKRVMEER-GGSRKIFLDEVSVLLRVSHPNLVG 70
DFR +G GA S V LAE A+K + +E G +E++VL ++ HPN+V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 71 LLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
L G L+++ ++ LFDR+ G + + + + A++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRI-----VEKGFYTERDASRLIFQVLDAVKYLH-- 133
Query: 131 ADPPIIHRDIKSSNIL---LIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
D I+HRD+K N+L L +D+ ++DFGL K+ DP ++ G+ GYV
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPG--SVLSTACGTPGYVAP 187
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELITG 214
L S D +S GV+ L+ G
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSN 112
H N++ LLG C + G +++EY + +L + + + +++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+S +AR +EYL SQ IHRD+ + N+L+ ++N K+ADFGL + N+ +
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 213
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K+ T+ + ++ L + +SDV+SFGVL+ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSN 112
H N++ LLG C + G +++EY + +L + + + +++ +
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+S +AR +EYL SQ IHRD+ + N+L+ ++N K+ADFGL + N+ +
Sbjct: 151 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 205
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K+ T+ + ++ L + +SDV+SFGVL+ E+ T
Sbjct: 206 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 29/207 (14%)
Query: 28 LAELGDGNFG------------------AVKRVMEERGGSRKIFLD-EVSVLLRVSHPNL 68
+ +LG+G+FG AVK + E GG+ L E+ +L + H N+
Sbjct: 14 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 73
Query: 69 VGLLGFCLEKGEQ--LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
V G C E G L++E+L + SL + Y ++ ++ +L A+ I + ++Y
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKE----YLPKNKNKINLKQQLKYAVQICKGMDY 129
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
L S+ +HRD+ + N+L+ ++ K+ DFGL K + + F Y
Sbjct: 130 LGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
Query: 187 TNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + F SDV+SFGV L EL+T
Sbjct: 187 ECLMQSKFY-IASDVWSFGVTLHELLT 212
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSN 112
H N++ LLG C + G +++EY + +L + + + +++ +
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+S +AR +EYL SQ IHRD+ + N+L+ ++N K+ADFGL + N+ +
Sbjct: 148 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 202
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K+ T+ + ++ L + +SDV+SFGVL+ E+ T
Sbjct: 203 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSN 112
H N++ LLG C + G +++EY + +L + + + +++ +
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+S +AR +EYL SQ IHRD+ + N+L+ ++N K+ADFGL + N+ +
Sbjct: 146 LVSCTYQLARGMEYLASQK---CIHRDLTARNVLVTENNVMKIADFGLAR--DINNIDYY 200
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K+ T+ + ++ L + +SDV+SFGVL+ E+ T
Sbjct: 201 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSN 112
H N++ LLG C + G +++EY + +L + + + +++ +
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+S +AR +EYL SQ IHRD+ + N+L+ ++N K+ADFGL + N+ +
Sbjct: 205 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 259
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K+ T+ + ++ L + +SDV+SFGVL+ E+ T
Sbjct: 260 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 28/212 (13%)
Query: 13 DFRIRIGVGATSFVYLAELGDGNFGAV-------KRVMEERGGSRKIFLDEVSVLLRVSH 65
DFR +G GA S V LAE D + K+ +E + GS + +E++VL ++ H
Sbjct: 21 DFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKKALEGKEGSME---NEIAVLHKIKH 75
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PN+V L G L+++ ++ LFDR+ G + + + + A++
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRI-----VEKGFYTERDASRLIFQVLDAVK 130
Query: 126 YLHSQADPPIIHRDIKSSNIL---LIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSF 182
YLH D I+HRD+K N+L L +D+ ++DFGL K+ DP ++ G+
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPG--SVLSTACGTP 182
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
GYV L S D +S GV+ L+ G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSN 112
H N++ LLG C + G +++EY + +L + + + +++ +
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+S +AR +EYL SQ IHRD+ + N+L+ ++N K+ADFGL + N+ +
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 213
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K+ T+ + ++ L + +SDV+SFGVL+ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSN 112
H N++ LLG C + G +++EY + +L + + + +++ +
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+S +AR +EYL SQ IHRD+ + N+L+ ++N K+ADFGL + N+ +
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 213
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K+ T+ + ++ L + +SDV+SFGVL+ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 22 ATSFVYLAELGDGNFGAVKR-----------VMEERGGSRKI--FLDEVSVLLRVSHPNL 68
A+ F +A LG G FG V + + + R K+ L EV +L ++H +
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 69 VGLLGFCLE-------------KGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
V LE K + +EY N +L+D +H+ W
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR---- 120
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLC----------KLGP 165
+ I AL Y+HSQ IIHRD+K NI + + + K+ DFGL KL
Sbjct: 121 LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNYLN-TGFVSTKSDVYSFGVLLLELI----TGLKSI 218
N P TS G+ YV T L+ TG + K D+YS G++ E+I TG++ +
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERV 235
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 32/207 (15%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGGSRKIFL-----------------DEVSVLLRVSHPN 67
F L ++G G+FG V + ++ R ++K+ E++VL + P
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNR--TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
+ G L+ + +++EYL S D + G L + +I +I + L+YL
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYL 120
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
HS+ IHRDIK++N+LL + KLADFG+ G D + KR + F ++
Sbjct: 121 HSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTD-TQIKRNXFVGTPF-WMAP 173
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELITG 214
+ +K+D++S G+ +EL G
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
++G G V++A AVK M+ S + FL E +V+ + H LV L +
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVK-TMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VV 79
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYG--QSLGVLSWSNRLSIALDIARALEYLHSQADPP 134
K ++ E++A SL D + + G Q L L + + IA + ++ +
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQRN--- 131
Query: 135 IIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGF 194
IHRD++++NIL+ K+ADFGL ++ D R+ + K + +N G
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGA-KFPIKWTAPEAINFGS 188
Query: 195 VSTKSDVYSFGVLLLELIT 213
+ KSDV+SFG+LL+E++T
Sbjct: 189 FTIKSDVWSFGILLMEIVT 207
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 32/207 (15%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGGSRKIFL-----------------DEVSVLLRVSHPN 67
F L ++G G+FG V + ++ R ++K+ E++VL + P
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNR--TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
+ G L+ + +++EYL S D + G L + +I +I + L+YL
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYL 135
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
HS+ IHRDIK++N+LL + KLADFG+ G D + KR + F ++
Sbjct: 136 HSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTD-TQIKRNXFVGTPF-WMAP 188
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELITG 214
+ +K+D++S G+ +EL G
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARG 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSN 112
H N++ LLG C + G +++EY + +L + + + +++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+S +AR +EYL SQ IHRD+ + N+L+ ++N ++ADFGL + N+ +
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMRIADFGLAR--DINNIDYY 213
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K+ T+ + ++ L + +SDV+SFGVL+ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + V + F +EV VL + H N++ +G+
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 73
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
K + ++ ++ SL+ +H + + IA A+ ++YLH+++ II
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL---NTG 193
HRD+KS+NI L +D K+ DFGL + Q S GS ++ + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS--GSILWMAPEVIRMQDKN 184
Query: 194 FVSTKSDVYSFGVLLLELITG 214
S +SDVY+FG++L EL+TG
Sbjct: 185 PYSFQSDVYAFGIVLYELMTG 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 16/161 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSN 112
H N++ LLG C + G +++EY + +L + + + +++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+S +AR +EYL SQ IHRD+ + N+L+ ++N K+ADFGL + N+ +
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 213
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K T+ + ++ L + +SDV+SFGVL+ E+ T
Sbjct: 214 KNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 25/199 (12%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
++G G V++A AVK M+ S + FL E +V+ + H LV L +
Sbjct: 189 KLGAGQFGEVWMATYNKHTKVAVK-TMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VV 246
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYG--QSLGVLSWSNRLSIALDIARALEYLHSQADPP 134
K ++ E++A SL D + + G Q L L + + IA + ++ +
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQRN--- 298
Query: 135 IIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGF 194
IHRD++++NIL+ K+ADFGL ++G K + +N G
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLARVG-------------AKFPIKWTAPEAINFGS 345
Query: 195 VSTKSDVYSFGVLLLELIT 213
+ KSDV+SFG+LL+E++T
Sbjct: 346 FTIKSDVWSFGILLMEIVT 364
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + V + F +EV VL + H N++ +G+
Sbjct: 35 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 93
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
K + ++ ++ SL+ +H + + IA A+ ++YLH+++ II
Sbjct: 94 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 146
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL---NTG 193
HRD+KS+NI L +D K+ DFGL + Q S GS ++ + +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS--GSILWMAPEVIRMQDKN 204
Query: 194 FVSTKSDVYSFGVLLLELITG 214
S +SDVY+FG++L EL+TG
Sbjct: 205 PYSFQSDVYAFGIVLYELMTG 225
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + V + F +EV VL + H N++ +G+
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 73
Query: 77 EKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
QL ++ ++ SL+ +H + + IA A+ ++YLH+++ I
Sbjct: 74 -TAPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL---NT 192
IHRD+KS+NI L +D K+ DFGL + + Q S GS ++ + +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS--GSILWMAPEVIRMQDK 183
Query: 193 GFVSTKSDVYSFGVLLLELITG 214
S +SDVY+FG++L EL+TG
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTG 205
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 18 IGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCLE 77
+G GATS VY + +V++ + +KI E+ VLLR+SHPN++ L
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLK-KTVDKKIVRTEIGVLLRLSHPNIIKLKEIFET 119
Query: 78 KGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIH 137
E L+LE + LFDR+ G S + I A+ YLH I+H
Sbjct: 120 PTEISLVLELVTGGELFDRI-----VEKGYYSERDAADAVKQILEAVAYLHENG---IVH 171
Query: 138 RDIKSSNILL---IDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGF 194
RD+K N+L D K+ADFGL K+ ++ G+ GY L
Sbjct: 172 RDLKPENLLYATPAPDAPLKIADFGLSKIV-----EHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 195 VSTKSDVYSFGVLLLELITGLK 216
+ D++S G++ L+ G +
Sbjct: 227 YGPEVDMWSVGIITYILLCGFE 248
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
RIG G+ VY + + V + F +EV VL + H N++ +G+
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 101
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
K + ++ ++ SL+ +H + + IA A+ ++YLH+++ II
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL---NTG 193
HRD+KS+NI L +D K+ DFGL + Q S GS ++ + +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS--GSILWMAPEVIRMQDKN 212
Query: 194 FVSTKSDVYSFGVLLLELITG 214
S +SDVY+FG++L EL+TG
Sbjct: 213 PYSFQSDVYAFGIVLYELMTG 233
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPELLKRREF 183
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPELLKRREF 184
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
++G G V++ + AVK ++ S + FL+E +++ + H LV L
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVK-TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
++ ++ E++A SL D + + G G + + + IA + Y+ + I
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEG---GKVLLPKLIDFSAQIAEGMAYIERKN---YI 131
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
HRD++++N+L+ + K+ADFGL ++ D R+ + K + +N G +
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGA-KFPIKWTAPEAINFGCFT 188
Query: 197 TKSDVYSFGVLLLELIT 213
KS+V+SFG+LL E++T
Sbjct: 189 IKSNVWSFGILLYEIVT 205
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPELLKRREF 183
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 65
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ +++EY++ SL D + G+ L + + +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAA 121
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGA- 175
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPELLKRREF 183
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPELLKRREF 183
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKI 233
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 184
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 65
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ +++EY++ SL D + G+ L + + +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAA 121
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA- 175
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 184
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 65
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ ++ EY++ SL D + G+ L + + +A
Sbjct: 66 VMKKIRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAA 121
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA- 175
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 183
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 184
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
++G G V++A AVK M+ S + FL E +V+ + H LV L +
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVK-TMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VV 252
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYG--QSLGVLSWSNRLSIALDIARALEYLHSQADPP 134
K ++ E++A SL D + + G Q L L + + IA + ++ +
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQRN--- 304
Query: 135 IIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGF 194
IHRD++++NIL+ K+ADFGL ++ D R+ + K + +N G
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGA-KFPIKWTAPEAINFGS 361
Query: 195 VSTKSDVYSFGVLLLELIT 213
+ KSDV+SFG+LL+E++T
Sbjct: 362 FTIKSDVWSFGILLMEIVT 380
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 183
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 183
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 18 IGVGATSFVYLAEL------GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGL 71
+G GA V+LAE D AVK + + +RK F E +L + H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 72 LGFCLEKGEQLLLLEYLANKSL--FDRMH------TYYGQSLGVLSWSNRLSIALDIARA 123
G C+E +++ EY+ + L F R H G L+ S L IA IA
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG 183
+ YL SQ +HRD+ + N L+ ++ K+ DFG+ + D R T +
Sbjct: 141 MVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML--PIR 195
Query: 184 YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ + +T+SDV+S GV+L E+ T
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 184
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 184
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 183
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 183
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 184
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 16/161 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSN 112
H N++ LLG C + G +++ Y + +L + + + +++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+S +AR +EYL SQ IHRD+ + N+L+ ++N K+ADFGL + N+ +
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 213
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K+ T+ + ++ L + +SDV+SFGVL+ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 124
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 182
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 232
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLD---EVSVLLRVSHPNLVGLLG 73
+G G S V+LA +L D AVK + + +L E ++HP +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY- 78
Query: 74 FCLEKGE--------QLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+ GE +++EY+ +L D +HT G ++ + + D +AL
Sbjct: 79 ---DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALN 130
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGY 184
+ H IIHRD+K +NIL+ N K+ DFG+ + D QT ++ G+ Y
Sbjct: 131 FSHQNG---IIHRDVKPANILISATNAVKVVDFGIARA--IADSGNSVXQTAAVIGTAQY 185
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
+ V +SDVYS G +L E++TG G + ++ + R +
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP 236
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 183
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E+ + +++G G V++ A+K ++ S + FL E V+ ++ H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRH 62
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
LV L E+ ++ EY++ SL D + G++ L + +A IA +
Sbjct: 63 EKLVQLYAVVSEE-PIXIVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMA 118
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ + K +
Sbjct: 119 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGA-KFPIKWT 172
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
G + KSDV+SFG+LL EL T
Sbjct: 173 APEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 24/238 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
K +DF I +G F VYLA F +V+ E+ G E+ +
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ + + ++ L+LE+ L+ + Q G + ++A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-----QKHGRFDEQRSATFMEELA 124
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y H + +IHRDIK N+L+ K+ADFG P R+ + G+
Sbjct: 125 DALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAP------SLRRRXMCGT 175
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEV 239
Y+ + K D++ GVL E + G+ + TE RR NV++
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH----TETHRRIVNVDL 229
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 24/238 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
K +DF I +G F VYLA F +V+ E+ G E+ +
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ + + ++ L+LE+ L+ + Q G + ++A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-----QKHGRFDEQRSATFMEELA 124
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y H + +IHRDIK N+L+ K+ADFG P R+ + G+
Sbjct: 125 DALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAP------SLRRRXMCGT 175
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEV 239
Y+ + K D++ GVL E + G+ + TE RR NV++
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH----TETHRRIVNVDL 229
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 8 KMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLR----- 62
++ T+ R+ IG G VY E D ++ + + SR + +V LR
Sbjct: 20 RVVTHSDRV-IGKGHFGVVYHGEYIDQAQNRIQCAI--KSLSRITEMQQVEAFLREGLLM 76
Query: 63 --VSHPNLVGLLGFCLE-KGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALD 119
++HPN++ L+G L +G +LL Y+ + L + + + + +S L
Sbjct: 77 RGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP----TVKDLISFGLQ 132
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
+AR +EYL Q +HRD+ + N +L + K+ADFGL + + ++ +
Sbjct: 133 VARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR 189
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L T +TKSDV+SFGVLL EL+T
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 126
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 184
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 24/238 (10%)
Query: 8 KMATNDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLL 61
K +DF I +G F VYLA F +V+ E+ G E+ +
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HPN++ + + ++ L+LE+ L+ + Q G + ++A
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-----QKHGRFDEQRSATFMEELA 125
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL Y H + +IHRDIK N+L+ K+ADFG P R+ + G+
Sbjct: 126 DALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAP------SLRRRXMCGT 176
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEV 239
Y+ + K D++ GVL E + G+ + TE RR NV++
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH----TETHRRIVNVDL 230
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G +G AV RV EE + + + E+ + ++H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 183
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 2 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 58
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ ++ EY++ SL D + G++ L + +A
Sbjct: 59 VMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAA 114
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 115 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA- 168
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 169 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFGAVKR---------------VMEERGGS----R 50
A N +RI + T F + LG G FG V + +ME R +
Sbjct: 37 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKAN 95
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 96 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 154
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 155 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 203
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 204 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 256
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 65
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ ++ EY++ SL D + G+ L + + +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEE-PIYIVCEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAA 121
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA- 175
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 16/161 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-----------LSWSN 112
H N++ LLG C + G +++ Y + +L + + + +++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+S +AR +EYL SQ IHRD+ + N+L+ ++N K+ADFGL + N+ +
Sbjct: 159 LVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 213
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K+ T+ + ++ L + +SDV+SFGVL+ E+ T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 65
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ ++ EY++ SL D + G+ L + + +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAA 121
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA- 175
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E+ + +++G G V++ A+K ++ S + FL E V+ ++ H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRH 63
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
LV L E+ ++ EY++ SL D + G+ L + + +A IA +
Sbjct: 64 EKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAAQIASGMA 119
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ + K +
Sbjct: 120 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA-KFPIKWT 173
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
G + KSDV+SFG+LL EL T
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 6 ELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSH 65
E+ + +++G G V++ A+K ++ S + FL E V+ ++ H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRH 61
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
LV L E+ ++ EY++ SL D + G+ L + + +A IA +
Sbjct: 62 EKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAAQIASGMA 117
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ + K +
Sbjct: 118 YVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA-KFPIKWT 171
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
G + KSDV+SFG+LL EL T
Sbjct: 172 APEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 95/228 (41%), Gaps = 44/228 (19%)
Query: 22 ATSFVYLAELGDGNFGAVKR-----------VMEERGGSRKI--FLDEVSVLLRVSHPNL 68
A+ F +A LG G FG V + + + R K+ L EV +L ++H +
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYV 64
Query: 69 VGLLGFCLE-------------KGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
V LE K + EY N++L+D +H+ W
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR---- 120
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLC----------KLGP 165
+ I AL Y+HSQ IIHR++K NI + + + K+ DFGL KL
Sbjct: 121 LFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNYLN-TGFVSTKSDVYSFGVLLLELI 212
N P TS G+ YV T L+ TG + K D YS G++ E I
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLD---EVSVLLRVSHPNLVGLLG 73
+G G S V+LA +L D AVK + + +L E ++HP +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY- 78
Query: 74 FCLEKGE--------QLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+ GE +++EY+ +L D +HT G ++ + + D +AL
Sbjct: 79 ---DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALN 130
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGY 184
+ H IIHRD+K +NI++ N K+ DFG+ + D QT ++ G+ Y
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA--IADSGNSVTQTAAVIGTAQY 185
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
+ V +SDVYS G +L E++TG G + ++ + R +
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP 236
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 65
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ +++EY++ L D + G+ L + + +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEE-PIYIVMEYMSKGCLLDFLKGEMGKYLRL---PQLVDMAA 121
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA- 175
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 175 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 231
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ ++ EY++ SL D + G++ L + +A
Sbjct: 232 VMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAA 287
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 288 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA- 341
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 175 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 231
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ ++ EY++ SL D + G++ L + +A
Sbjct: 232 VMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAA 287
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 288 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA- 341
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 34/219 (15%)
Query: 23 TSFVYLAELGDGNFGAVKRVMEERGGSRKIF-------------------LDEVSVLLRV 63
T F +L LG G+FG V ++ ER G+ +++ + E VL
Sbjct: 20 TDFNFLMVLGKGSFGKV--MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 64 SHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIAR 122
P + L C + ++L ++EY+ L Y+ Q +G + + A +IA
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLM-----YHIQQVGRFKEPHAVFYAAEIAI 132
Query: 123 ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSF 182
L +L S+ II+RD+K N++L + H K+ADFG+CK ++ G+
Sbjct: 133 GLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT----TKXFCGTP 185
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
Y+ + D ++FGVLL E++ G +G
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 36/233 (15%)
Query: 8 KMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIF-------------- 53
K N R R+ + T F +L LG G+FG V ++ ER G+ +++
Sbjct: 328 KFDNNGNRDRMKL--TDFNFLMVLGKGSFGKV--MLSERKGTDELYAVKILKKDVVIQDD 383
Query: 54 -----LDEVSVLLRVSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGV 107
+ E VL P + L C + ++L ++EY+ L Y+ Q +G
Sbjct: 384 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLM-----YHIQQVGR 438
Query: 108 LSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFN 167
+ + A +IA L +L S+ II+RD+K N++L + H K+ADFG+CK ++
Sbjct: 439 FKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
G+ Y+ + D ++FGVLL E++ G +G
Sbjct: 496 GVT----TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 44/261 (16%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGGSRKIFLD---------------EVSVLLRVSHPNLV 69
F++ +LG G FG V V E G ++ E+ VL + HPN++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLG-VLSWSNRLSIALDIARALEYLH 128
+ + +++E L +R+ + Q+ G LS + + AL Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVS--AQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 129 SQADPPIIHRDIKSSNILLIDDN-HA--KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
SQ ++H+D+K NIL D + H+ K+ DFGL +L ++ T+ G+ Y+
Sbjct: 142 SQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE-----HSTNAAGTALYM 193
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG--------LKSIQGSATLAE--WTEECR--R 233
V+ K D++S GV++ L+TG L+ +Q AT E + ECR
Sbjct: 194 APEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLT 252
Query: 234 NKNVEVWAQML--DPKLNGDA 252
+ V++ QML DP+ A
Sbjct: 253 PQAVDLLKQMLTKDPERRPSA 273
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 86/173 (49%), Gaps = 25/173 (14%)
Query: 1 TYALEELKMATNDFRIR--IGVGATSFVYLAE-LGDGNFGAVKRVMEERGGSRKIFLDEV 57
T L EL++ R+R + G +FVY A+ +G G A+KR++ + + EV
Sbjct: 22 TVELGELRL-----RVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEV 76
Query: 58 SVLLRVS-HPNLVGLLGFC----LEKGE------QLLLLEYLANKSLFDRMHTYYGQSLG 106
+ ++S HPN+V FC + K E + LLL L L + + +S G
Sbjct: 77 CFMKKLSGHPNIVQ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKM--ESRG 131
Query: 107 VLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFG 159
LS L I RA++++H Q PPIIHRD+K N+LL + KL DFG
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 18 IGVGATSFVYLAE--LGDGNFGAVKRV-MEERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
+G G V+ A+ + D N+ A+KR+ + R +R+ + EV L ++ HP +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNY-AIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA 71
Query: 75 CLEKGEQLLLLEYLANKSLFDRMHTYYGQSL-----GVLSWSNR-----LSIALDIARAL 124
LEK L L+ +M ++L G + R L I L IA A+
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP--------KRQT 176
E+LHS+ ++HRD+K SNI D+ K+ DFGL ++ + R T
Sbjct: 132 EFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 177 SIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELI 212
G+ Y+ ++ S K D++S G++L EL+
Sbjct: 189 GQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 18 IGVGATSFVYLAEL------GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGL 71
+G GA V+LAE D AVK + + +RK F E +L + H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 72 LGFCLEKGEQLLLLEYLANKSL--FDRMHTYYG---------QSLGVLSWSNRLSIALDI 120
G C + +++ EY+ + L F R H Q+ G L S L IA I
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKG 180
A + YL SQ +HRD+ + N L+ + K+ DFG+ + D R T +
Sbjct: 143 ASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML-- 197
Query: 181 SFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ + +T+SDV+SFGV+L E+ T
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 25/196 (12%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRV-SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD 95
AVK + E+ S R+ + E+ ++ ++ SH N+V LLG C G L+ EY L +
Sbjct: 79 AVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLN 138
Query: 96 RMHT-----------YYGQS-------LGVLSWSNRLSIALDIARALEYLHSQADPPIIH 137
+ + Y Q L VL++ + L A +A+ +E+L ++ +H
Sbjct: 139 YLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVH 195
Query: 138 RDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVST 197
RD+ + N+L+ K+ DFGL + +D N R + + ++ L G +
Sbjct: 196 RDLAARNVLVTHGKVVKICDFGLAR-DIMSDSNYVVRGNA-RLPVKWMAPESLFEGIYTI 253
Query: 198 KSDVYSFGVLLLELIT 213
KSDV+S+G+LL E+ +
Sbjct: 254 KSDVWSYGILLWEIFS 269
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 65
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ ++ EY++ SL D + G+ L + + +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAA 121
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD+ ++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 122 QIASGMAYVERMN---YVHRDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQGA- 175
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 19/234 (8%)
Query: 18 IGVGATSFVYLAELGDGN-FGAVKRVM-----EERGGSRKIFLDEVSVLLRVSHPNLVGL 71
+G G + VY A + N A+K++ E + G + L E+ +L +SHPN++GL
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
L K L+ +++ + + VL+ S+ + L + LEYLH
Sbjct: 78 LDAFGHKSNISLVFDFMETD-----LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 132
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
I+HRD+K +N+LL ++ KLADFGL K F PNR + + + +
Sbjct: 133 ---ILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYXHQVVTRWYRAPELLF-G 186
Query: 192 TGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE--ECRRNKNVEVWAQM 243
D+++ G +L EL+ + + G + L + T E E W M
Sbjct: 187 ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 27/230 (11%)
Query: 31 LGDGNFG----AVKRVMEERGGSRKIFLD-----------EVSVLLRVSHPNLVGLLGFC 75
LG+G G AV RV EE + + + E+ + ++H N+V G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E Q L LEY + LFDR+ G + + + + YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIG---I 125
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TGF 194
HRDIK N+LL + ++ K++DFGL + +N NR + + G+ YV L F
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN--NRERLLNKMCGTLPYVAPELLKRREF 183
Query: 195 VSTKSDVYSFGVLLLELITG-LKSIQGSATLAEWTEECRRNKNVEVWAQM 243
+ DV+S G++L ++ G L Q S + E+++ + + W ++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 35/213 (16%)
Query: 23 TSFVYLAELGDGNFGAVKR-----------------VMEERGG--SRKIFLDEVSVLLRV 63
T L LG G FG V + V+E++ G S + D + + +
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLG---VLSWSNRLSIALDI 120
H ++V LLG C QL+ +YL SL D + + G +LG +L+W + I
Sbjct: 91 DHAHIVRLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRG-ALGPQLLLNW------GVQI 142
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKG 180
A+ + YL ++HR++ + N+LL + ++ADFG+ L P +D + + K
Sbjct: 143 AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD--KQLLYSEAKT 197
Query: 181 SFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ ++ G + +SDV+S+GV + EL+T
Sbjct: 198 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 16 IRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFC 75
+++G G V++ A+K ++ S + FL E V+ ++ H LV L
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIK-TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
E+ ++ EY++ SL D + G++ L + +A IA + Y+
Sbjct: 332 SEE-PIYIVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMN---Y 384
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFV 195
+HRD++++NIL+ ++ K+ADFGL +L D RQ + K + G
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA-KFPIKWTAPEAALYGRF 441
Query: 196 STKSDVYSFGVLLLELIT 213
+ KSDV+SFG+LL EL T
Sbjct: 442 TIKSDVWSFGILLTELTT 459
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 35/213 (16%)
Query: 23 TSFVYLAELGDGNFGAVKR-----------------VMEERGG--SRKIFLDEVSVLLRV 63
T L LG G FG V + V+E++ G S + D + + +
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLG---VLSWSNRLSIALDI 120
H ++V LLG C QL+ +YL SL D + + G +LG +L+W + I
Sbjct: 73 DHAHIVRLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRG-ALGPQLLLNW------GVQI 124
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKG 180
A+ + YL ++HR++ + N+LL + ++ADFG+ L P +D + + K
Sbjct: 125 AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD--KQLLYSEAKT 179
Query: 181 SFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ ++ G + +SDV+S+GV + EL+T
Sbjct: 180 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 7 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 65
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL++ + + L D R H S +L
Sbjct: 66 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 124
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 125 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 173
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 174 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 226
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 3 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 61
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL++ + + L D R H S +L
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 121 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 169
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 4 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 62
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL++ + + L D R H S +L
Sbjct: 63 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 121
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 122 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 170
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 171 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 6 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 64
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL++ + + L D R H S +L
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 124 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 172
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 4 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 62
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL++ + + L D R H S +L
Sbjct: 63 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLL 121
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 122 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 170
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 171 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 223
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 5 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 63
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL++ + + L D R H S +L
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 123 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 171
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 65
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ ++ EY++ L D + G+ L + + +A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGCLLDFLKGEMGKYLRL---PQLVDMAA 121
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA- 175
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 176 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 19/216 (8%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 175 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 231
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLL-EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIA 117
V+ ++ H LV L E E + ++ EY++ SL D + G++ L + +A
Sbjct: 232 VMKKLRHEKLVQLYAVVSE--EPIYIVGEYMSKGSLLDFLK---GETGKYLRLPQLVDMA 286
Query: 118 LDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTS 177
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 287 AQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA 341
Query: 178 IKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 342 -KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 6 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 62
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ ++ EY+ SL D + G++ L + ++
Sbjct: 63 VMKKLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLK---GETGKYLRLPQLVDMSA 118
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 119 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEWTARQGA- 172
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 173 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 83 LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKS 142
+++EY+ +L D +HT G ++ + + D +AL + H IIHRD+K
Sbjct: 110 IVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 161
Query: 143 SNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYVDTNYLNTGFVSTKSDV 201
+NI++ N K+ DFG+ + D QT ++ G+ Y+ V +SDV
Sbjct: 162 ANIMISATNAVKVMDFGIARA--IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 219
Query: 202 YSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
YS G +L E++TG G + ++ + R +
Sbjct: 220 YSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP 253
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 176 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQ 232
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ ++ EY++ SL D + G+ L + + +A
Sbjct: 233 VMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRL---PQLVDMAA 288
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 289 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLGRL--IEDNEYTARQGA- 342
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 343 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGE------QLLLLEYLANKSLFDRMHTYYGQSLG 106
F E ++HP +V + + + E +++EY+ +L D +HT G
Sbjct: 59 FRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----G 111
Query: 107 VLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPF 166
++ + + D +AL + H IIHRD+K +NI++ N K+ DFG+ +
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA--I 166
Query: 167 NDPNRPKRQT-SIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLA 225
D QT ++ G+ Y+ V +SDVYS G +L E++TG G + ++
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
Query: 226 EWTEECRRNK 235
+ R +
Sbjct: 227 VAYQHVREDP 236
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 3 ALEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRV----MEERGGSRKIFLDEVS 58
A + ++ R+ + +G F E+ G + RV ++ S + FL E
Sbjct: 6 AKDAWEIPRESLRLEVKLGQGCF---GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ 62
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
V+ ++ H LV L E+ ++ EY+ SL D + G++ L + ++
Sbjct: 63 VMKKLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLK---GETGKYLRLPQLVDMSA 118
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
IA + Y+ +HRD++++NIL+ ++ K+ADFGL +L D RQ +
Sbjct: 119 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGA- 172
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + G + KSDV+SFG+LL EL T
Sbjct: 173 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 41/236 (17%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFGAVKR-----------------VMEERGGSR-- 50
A N +RI + T + LG G FG V + V+ E +
Sbjct: 5 APNQALLRI-LKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKAN 63
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSW 110
K LDE V+ V P + LLG CL QL+ + + L D + ++ G L
Sbjct: 64 KEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVT-QLMPYGCLLDHVR----ENRGRLGS 118
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPN 170
+ L+ + IA+ + YL D ++HRD+ + N+L+ NH K+ DFGL +L +
Sbjct: 119 QDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID--- 172
Query: 171 RPKRQTSIKGSFGYVDTNYLNTGFV-----STKSDVYSFGVLLLELIT-GLKSIQG 220
+T G V ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 173 ----ETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDG 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 83 LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKS 142
+++EY+ +L D +HT G ++ + + D +AL + H IIHRD+K
Sbjct: 93 IVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKP 144
Query: 143 SNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYVDTNYLNTGFVSTKSDV 201
+NI++ N K+ DFG+ + D QT ++ G+ Y+ V +SDV
Sbjct: 145 ANIMISATNAVKVMDFGIARA--IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 202 YSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
YS G +L E++TG G + ++ + R +
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP 236
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 34/225 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 3 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 61
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 121 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 169
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ K ++ + + +SDV+S+GV + EL+T
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLD---EVSVLLRVSHPNLVGLLG 73
+G G S V+LA +L D AVK + + +L E ++HP +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY- 78
Query: 74 FCLEKGE--------QLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+ GE +++EY+ +L D +HT G ++ + + D +AL
Sbjct: 79 ---DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALN 130
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGY 184
+ H IIHRD+K +NI++ N K+ DFG+ + D QT ++ G+ Y
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA--IADSGNSVTQTAAVIGTAQY 185
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
+ V +SDVYS G +L E++TG G + + + R +
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDP 236
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 92/216 (42%), Gaps = 31/216 (14%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGS-------RK---IFLDEVS-------V 59
R V F YL LG G FG V V E+ G RK I DEV+ V
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 60 LLRVSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
L HP L L + + ++L ++EY LF ++ V +
Sbjct: 62 LQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELF-----FHLSRERVFTEERARFYGA 115
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+I ALEYLHS+ +++RDIK N++L D H K+ DFGLCK G + +
Sbjct: 116 EIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT----MKTF 168
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
G+ Y+ L D + GV++ E++ G
Sbjct: 169 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 204
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 40/226 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG R+ EVS+L +V HPN++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L + + +L+LE ++ LFD + Q LS S I + YLH+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFD----FLAQKES-LSEEEATSFIKQILDGVNYLHT 133
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ I H D+K NI+L+D N H KL DFGL D K +I G+ +V
Sbjct: 134 KK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFK---NIFGTPEFV 185
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA---TLAEWT 228
+N + ++D++S GV+ L++G G TLA T
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGGS----RKI--------FLDEVSVLLRVSHPNLVGLL 72
F L +LG+G++G+V + + + G +++ + E+S++ + P++V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 73 GFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQAD 132
G + + +++EY S+ D + L+ +I + LEYLH
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIRLRNK----TLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNT 192
IHRDIK+ NILL + HAKLADFG+ G D KR I F
Sbjct: 147 ---IHRDIKAGNILLNTEGHAKLADFGVA--GQLTD-XMAKRNXVIGTPFWMAPEVIQEI 200
Query: 193 GFVSTKSDVYSFGVLLLELITG 214
G+ + +D++S G+ +E+ G
Sbjct: 201 GY-NCVADIWSLGITAIEMAEG 221
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 13 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 71
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 72 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 130
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 131 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 179
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 180 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 232
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 9 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 67
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 68 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 126
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 127 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 175
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 176 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 228
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 10 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 68
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 128 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 176
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 34/241 (14%)
Query: 30 ELGDGNFGAVKR-------------VMEERGGSRKI----FLDEVSVLLRVSHPNLVGLL 72
ELG GNFG+V++ + + G+ K + E ++ ++ +P +V L+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 73 GFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQAD 132
G C + E L+L+ +A + + + V SN + ++ ++YL +
Sbjct: 77 GVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPV---SNVAELLHQVSMGMKYLEEKN- 130
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNT 192
+HRD+ + N+LL++ ++AK++DFGL K +D R K + +N
Sbjct: 131 --FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPLKWYAPECINF 187
Query: 193 GFVSTKSDVYSFGVLLLELIT----GLKSIQGSATLAEWTE----ECRRNKNVEVWAQML 244
S++SDV+S+GV + E ++ K ++G +A + EC E++A M
Sbjct: 188 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMS 247
Query: 245 D 245
D
Sbjct: 248 D 248
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 3 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 61
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 121 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 169
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 6 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 64
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 124 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 172
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 6 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 64
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 124 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 172
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 6 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 64
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 124 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 172
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 38/246 (15%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVM--EERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
++G G VY A+ G A+KR+ E G + E+S+L + HPN+V L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 75 CLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQA 131
+ L+ E++ K + D T S ++ I L + R + + H
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDS--------QIKIYLYQLLRGVAHCHQHR 139
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
I+HRD+K N+L+ D KLADFGL + F P R + + D +
Sbjct: 140 ---ILHRDLKPQNLLINSDGALKLADFGLARA--FGIPVRSYTHEVVTLWYRAPDV-LMG 193
Query: 192 TGFVSTKSDVYSFGVLLLELITG---------------LKSIQGSATLAEWTEECRRNKN 236
+ ST D++S G + E+ITG + SI G+ EW + +
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ----VQE 249
Query: 237 VEVWAQ 242
+ +W Q
Sbjct: 250 LPLWKQ 255
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 3 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 61
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLL 120
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 121 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 169
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 5 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 63
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 123 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 171
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 38/246 (15%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVM--EERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
++G G VY A+ G A+KR+ E G + E+S+L + HPN+V L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 75 CLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQA 131
+ L+ E++ K + D T S ++ I L + R + + H
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDS--------QIKIYLYQLLRGVAHCHQHR 139
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
I+HRD+K N+L+ D KLADFGL + F P R + + D +
Sbjct: 140 ---ILHRDLKPQNLLINSDGALKLADFGLARA--FGIPVRSYTHEVVTLWYRAPDV-LMG 193
Query: 192 TGFVSTKSDVYSFGVLLLELITG---------------LKSIQGSATLAEWTEECRRNKN 236
+ ST D++S G + E+ITG + SI G+ EW + +
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ----VQE 249
Query: 237 VEVWAQ 242
+ +W Q
Sbjct: 250 LPLWKQ 255
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 28 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 86
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 87 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 145
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 146 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 194
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 195 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 247
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 38/211 (18%)
Query: 31 LGDGNFGAVKRVMEERGG--------------SRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
LG G FG V + E G ++ +E+SV+ ++ H NL+ L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 77 EKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPP 134
K + +L++EY+ LFDR+ +Y L + + + I + ++H
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ------ICEGIRHMHQMY--- 207
Query: 135 IIHRDIKSSNILLI--DDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG---YVDTNY 189
I+H D+K NIL + D K+ DFGL + R K + +K +FG ++
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLAR--------RYKPREKLKVNFGTPEFLAPEV 259
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
+N FVS +D++S GV+ L++GL G
Sbjct: 260 VNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG 290
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG---SRKIF------------LDEVSVLLRVSHPNLV 69
F ++ELG GN G V +V G +RK+ + E+ VL + P +V
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS------IALDIARA 123
G G GE + +E++ SL VL + R+ +++ + R
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSLDQ-----------VLKEAKRIPEEILGKVSIAVLRG 126
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG 183
L YL + I+HRD+K SNIL+ KL DFG+ G D S G+
Sbjct: 127 LAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLID----SMANSFVGTRS 178
Query: 184 YVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L S +SD++S G+ L+EL G
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 37/221 (16%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG---SRKIF------------LDEVSVLLRVSHPNLV 69
F ++ELG GN G V +V + G +RK+ + E+ VL + P +V
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYG----QSLGVLSWSNRLSIALDIARALE 125
G G GE + +E++ SL D++ G Q LG ++SIA + + L
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG------KVSIA--VIKGLT 137
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + I+HRD+K SNIL+ KL DFG+ G D S G+ Y+
Sbjct: 138 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLID----SMANSFVGTRSYM 189
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSI-QGSATLA 225
L S +SD++S G+ L+E+ G I GS ++A
Sbjct: 190 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMA 230
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G +++ EY+ N SL + T+ GQ +
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ----FT 149
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + + + YL +D +HRD+ + N+L+ + K++DFGL ++ +DP
Sbjct: 150 IMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE-DDP 205
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ T K + + S+ SDV+SFGV++ E++
Sbjct: 206 DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE +A LFD + L+ I + YLHS
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFD-----FLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 133 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPAFV 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
+N + ++D++S GV+ L++G G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 14 FRIRIGVGATSFVYLAE-LGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLL 72
F ++G G S+V L E L DG+F A+KR++ R+ E + +HPN++ L+
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 73 GFCLE----KGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLH 128
+CL K E LLL + +L++ + + L+ L + L I R LE +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKG-NFLTEDQILWLLLGICRGLEAIH 151
Query: 129 SQADPPIIHRDIKSSNILLIDDNHAKLADFG 159
++ HRD+K +NILL D+ L D G
Sbjct: 152 AKG---YAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 17 RIGVGATSFVYLAELGDGNFG-AVKRVM---EERGGSRKIFLDEVSVLLRVSHPNLVGLL 72
++G G S VYLAE N A+K + E+ + K F EV ++SH N+V ++
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 73 GFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQAD 132
E L++EY+ +L + Y +S G LS ++ I +++ H D
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTL-----SEYIESHGPLSVDTAINFTNQILDGIKHAH---D 129
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNT 192
I+HRDIK NIL+ + K+ DFG+ K + + G+ Y
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL---SETSLTQTNHVLGTVQYFSPEQAKG 186
Query: 193 GFVSTKSDVYSFGVLLLELITGLKSIQGSATLA 225
+D+YS G++L E++ G G ++
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPPFNGETAVS 219
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRVSHP-NLVGLLGFCLEKGEQLLLL---------- 85
AVK + E S + + E+ +L+ + H N+V LLG C + G L+++
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
Query: 86 EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNI 145
YL +K + Y L+ + + + +A+ +E+L S+ IHRD+ + NI
Sbjct: 121 TYLRSKR--NEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK---XIHRDLAARNI 175
Query: 146 LLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFG 205
LL + N K+ DFGL + + DP+ R+ + ++ + + +SDV+SFG
Sbjct: 176 LLSEKNVVKICDFGLAR-DIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 233
Query: 206 VLLLELITGLKSIQGSATLAEWTEECRRNKN 236
VLL E+ + S + E E CRR K
Sbjct: 234 VLLWEIFSLGASPYPGVKIDE--EFCRRLKE 262
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 32/221 (14%)
Query: 22 ATSFVYLAELGDGNFGAV-------------KRVMEERG----GSRKIFLDEVSVLLR-V 63
+ F +L +G G+FG V +V++++ K + E +VLL+ V
Sbjct: 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 96
Query: 64 SHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIAR 122
HP LVGL F + ++L +L+Y+ LF Y+ Q A +IA
Sbjct: 97 KHPFLVGL-HFSFQTADKLYFVLDYINGGELF-----YHLQRERCFLEPRARFYAAEIAS 150
Query: 123 ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSF 182
AL YLHS I++RD+K NILL H L DFGLCK + ++ G+
Sbjct: 151 ALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK----ENIEHNSTTSTFCGTP 203
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSAT 223
Y+ L+ D + G +L E++ GL T
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 244
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 39/238 (16%)
Query: 5 EELKMATNDF-RIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIF---------- 53
E+ K +N+ R+++ T F +L LG G+FG V ++ +R G+ +++
Sbjct: 4 EDRKQPSNNLDRVKL----TDFNFLMVLGKGSFGKV--MLADRKGTEELYAIKILKKDVV 57
Query: 54 ---------LDEVSVLLRVSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQ 103
+ E VL + P + L C + ++L ++EY+ L Y+ Q
Sbjct: 58 IQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLM-----YHIQ 112
Query: 104 SLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL 163
+G + A +I+ L +LH + II+RD+K N++L + H K+ADFG+CK
Sbjct: 113 QVGKFKEPQAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE 169
Query: 164 GPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
+ G+ Y+ + D +++GVLL E++ G G
Sbjct: 170 HMMDGVT----TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 223
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGS-------RK---IFLDEVS-------VLLR 62
V F YL LG G FG V V E+ G RK I DEV+ VL
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 63 VSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
HP L L + + ++L ++EY LF ++ V + +I
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGELF-----FHLSRERVFTEERARFYGAEIV 115
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
ALEYLHS+ +++RDIK N++L D H K+ DFGLCK G + + G+
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT----MKTFCGT 168
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L D + GV++ E++ G
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 38 AVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRM 97
A+K ER R+ FL E S++ + HPN++ L G +++ EY+ N SL +
Sbjct: 84 ALKAGYTER--QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
Query: 98 HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLAD 157
T+ GQ + + + + + YL +D +HRD+ + N+L+ + K++D
Sbjct: 142 RTHDGQ----FTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 158 FGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
FGL ++ +DP+ T K + + S+ SDV+SFGV++ E++
Sbjct: 195 FGLSRVLE-DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 7 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 65
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL++ + + L D R H S +L
Sbjct: 66 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 124
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFG KL
Sbjct: 125 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGA 173
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 174 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 226
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 5 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 63
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL++ + + L D R H S +L
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFG KL
Sbjct: 123 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGA 171
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + L G FG A+K + E +
Sbjct: 10 APNQALLRI-LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 68
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL++ + + L D R H S +L
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 128 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 176
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 5 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 63
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL++ + + L D R H S +L
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFG KL
Sbjct: 123 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGA 171
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG---SRKIF------------LDEVSVLLRVSHPNLV 69
F L +G G+FG V + ++ + KI E++VL + P +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
G L+ + +++EYL S D + G L + +I +I + L+YLHS
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKP------GPLEETYIATILREILKGLDYLHS 134
Query: 130 QADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
+ IHRDIK++N+LL + KLADFG+ G D + KR + F ++
Sbjct: 135 ERK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTD-TQIKRNXFVGTPF-WMAPEV 187
Query: 190 LNTGFVSTKSDVYSFGVLLLELITG 214
+ K+D++S G+ +EL G
Sbjct: 188 IKQSAYDFKADIWSLGITAIELAKG 212
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 12 NDFRIRIGVGATSF--VYLAELGDGNFGAVKRVME----ERGGSRKIFLDEVSVLLRVSH 65
+DF I +G F VYLA +F +V+ E+ G E+ + + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
PN++ L + ++ L+LEY L+ + Q +I ++A AL
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL-----QKSCTFDEQRTATIMEELADALM 137
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y H + +IHRDIK N+LL K+ADFG P R+ ++ G+ Y+
Sbjct: 138 YCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAP------SLRRKTMCGTLDYL 188
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+ + K D++ GVL EL+ G + ++
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESAS 225
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 45/236 (19%)
Query: 27 YLAELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHP 66
Y+ ++G+G FG AVK + EE + F E +++ +P
Sbjct: 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSN-------------- 112
N+V LLG C LL EY+A L + + + ++ LS S+
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 113 -----RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFN 167
+L IA +A + YL + +HRD+ + N L+ ++ K+ADFGL +
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQGSA 222
D + +I + ++ + N +T+SDV+++GV+L E+ + GL+ G A
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNR--YTTESDVWAYGVVLWEIFSYGLQPYYGMA 281
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 33/217 (15%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGGSR-KIFLDEV--------------------SVLLRV 63
F L LG G +G V +V + G + KIF +V ++L V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
HP +V L+ G+ L+LEYL+ LF ++ + G+ +I+ A
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-----EREGIFMEDTACFYLAEISMA 133
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG 183
L +LH + II+RD+K NI+L H KL DFGLCK + + G+
Sbjct: 134 LGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG----TVTHTFCGTIE 186
Query: 184 YVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
Y+ L + D +S G L+ +++TG G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGS-------RK---IFLDEVS-------VLLR 62
V F YL LG G FG V V E+ G RK I DEV+ VL
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 63 VSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
HP L L + + ++L ++EY LF ++ V + +I
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGELF-----FHLSRERVFTEERARFYGAEIV 115
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
ALEYLHS+ +++RDIK N++L D H K+ DFGLCK G + + G+
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT----MKTFCGT 168
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L D + GV++ E++ G
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGG---SRKIFLDEV--------------SVLLR 62
V F YL LG G FG V V E+ G + KI EV VL
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 63 VSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
HP L L + + ++L ++EY LF ++ V S +I
Sbjct: 208 SRHPFLTAL-KYSFQTHDRLCFVMEYANGGELF-----FHLSRERVFSEDRARFYGAEIV 261
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL+YLHS+ + +++RD+K N++L D H K+ DFGLCK G + + G+
Sbjct: 262 SALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT----MKTFCGT 315
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L D + GV++ E++ G
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 348
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE +A LFD + L+ I + YLHS
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHS 132
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 133 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPEFV 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
+N + ++D++S GV+ L++G G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE +A LFD + L+ I + YLHS
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFD-----FLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 132 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPEFV 183
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
+N + ++D++S GV+ L++G G
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE +A LFD + L+ I + YLHS
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFD-----FLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 133 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPEFV 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
+N + ++D++S GV+ L++G G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 34/236 (14%)
Query: 8 KMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFL------------- 54
K ++ G + L ELG G FG V R +E+ G ++F+
Sbjct: 36 KYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATG--RVFVAKFINTPYPLDKY 93
Query: 55 ---DEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWS 111
+E+S++ ++ HP L+ L +K E +L+LE+L+ LFDR+ +S +
Sbjct: 94 TVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI----AAEDYKMSEA 149
Query: 112 NRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHA--KLADFGLC-KLGPFND 168
++ L+++H + I+H DIK NI+ + K+ DFGL KL +
Sbjct: 150 EVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKL----N 202
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATL 224
P+ + T+ F + ++ V +D+++ GVL L++GL G L
Sbjct: 203 PDEIVKVTTATAEFAAPEI--VDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL 256
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 112/241 (46%), Gaps = 34/241 (14%)
Query: 30 ELGDGNFGAVKR-------------VMEERGGSRKI----FLDEVSVLLRVSHPNLVGLL 72
ELG GNFG+V++ + + G+ K + E ++ ++ +P +V L+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 73 GFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQAD 132
G C + E L+L+ +A +H + + SN + ++ ++YL +
Sbjct: 403 GVC--QAEALMLVMEMAGGG---PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN- 456
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNT 192
+HR++ + N+LL++ ++AK++DFGL K +D R K + +N
Sbjct: 457 --FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPLKWYAPECINF 513
Query: 193 GFVSTKSDVYSFGVLLLELIT----GLKSIQGSATLAEWTE----ECRRNKNVEVWAQML 244
S++SDV+S+GV + E ++ K ++G +A + EC E++A M
Sbjct: 514 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMS 573
Query: 245 D 245
D
Sbjct: 574 D 574
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE +A LFD + L+ I + YLHS
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFD-----FLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 132 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPEFV 183
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
+N + ++D++S GV+ L++G G
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGG---SRKIFLDEV--------------SVLLR 62
V F YL LG G FG V V E+ G + KI EV VL
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 63 VSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
HP L L + + ++L ++EY LF ++ V S +I
Sbjct: 205 SRHPFLTAL-KYSFQTHDRLCFVMEYANGGELF-----FHLSRERVFSEDRARFYGAEIV 258
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL+YLHS+ + +++RD+K N++L D H K+ DFGLCK G + + G+
Sbjct: 259 SALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT----MKTFCGT 312
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L D + GV++ E++ G
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE +A LFD + L+ I + YLHS
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFD-----FLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 133 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPEFV 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+N + ++D++S GV+ L++G G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 18 ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE +A LFD + L+ I + YLHS
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFD-----FLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 133 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPEFV 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
+N + ++D++S GV+ L++G G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE +A LFD + L+ I + YLHS
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFD-----FLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 133 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPEFV 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+N + ++D++S GV+ L++G G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE +A LFD + L+ I + YLHS
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFD-----FLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 133 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPEFV 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+N + ++D++S GV+ L++G G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE +A LFD + L+ I + YLHS
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFD-----FLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 133 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPEFV 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
+N + ++D++S GV+ L++G G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE +A LFD + L+ I + YLHS
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFD-----FLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 133 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPEFV 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
+N + ++D++S GV+ L++G G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 23 TSFVYLAELGDGNFG------------------AVKRVMEERGG-SRKIFLDEVSVLLRV 63
T F + LG G FG A+K + E + K LDE V+ V
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIA 121
+P++ LLG CL QL+ + + L D R H S +L+W + IA
Sbjct: 69 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 121
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
+ + YL D ++HRD+ + N+L+ H K+ DFGL KL + K
Sbjct: 122 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVP 176
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
++ + + +SDV+S+GV + EL+T G K G
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG---SRKIF------------LDEVSVLLRVSHPNLV 69
F ++ELG GN G V +V + G +RK+ + E+ VL + P +V
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYG----QSLGVLSWSNRLSIALDIARALE 125
G G GE + +E++ SL D++ G Q LG ++SIA + + L
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG------KVSIA--VIKGLT 180
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + I+HRD+K SNIL+ KL DFG+ G D S G+ Y+
Sbjct: 181 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLID----SMANSFVGTRSYM 232
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
L S +SD++S G+ L+E+ G
Sbjct: 233 SPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGS-------RK---IFLDEVS-------VLLR 62
V F YL LG G FG V V E+ G RK I DEV+ VL
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 63 VSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
HP L L + + ++L ++EY LF ++ V + +I
Sbjct: 67 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGELF-----FHLSRERVFTEERARFYGAEIV 120
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
ALEYLHS+ +++RDIK N++L D H K+ DFGLCK G + G+
Sbjct: 121 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT----MKXFCGT 173
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L D + GV++ E++ G
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGS-------RK---IFLDEVS-------VLLR 62
V F YL LG G FG V V E+ G RK I DEV+ VL
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 63 VSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
HP L L + + ++L ++EY LF ++ V + +I
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGELF-----FHLSRERVFTEERARFYGAEIV 115
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
ALEYLHS+ +++RDIK N++L D H K+ DFGLCK G + G+
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT----MKXFCGT 168
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L D + GV++ E++ G
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE +A LFD + L+ I + YLHS
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHS 132
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 133 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPEFV 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
+N + ++D++S GV+ L++G G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGS-------RK---IFLDEVS-------VLLR 62
V F YL LG G FG V V E+ G RK I DEV+ VL
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 63 VSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
HP L L + + ++L ++EY LF ++ V + +I
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGELF-----FHLSRERVFTEERARFYGAEIV 115
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
ALEYLHS+ +++RDIK N++L D H K+ DFGLCK G + G+
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT----MKXFCGT 168
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L D + GV++ E++ G
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG---SRKIF------------LDEVSVLLRVSHPNLV 69
F ++ELG GN G V +V + G +RK+ + E+ VL + P +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYG----QSLGVLSWSNRLSIALDIARALE 125
G G GE + +E++ SL D++ G Q LG ++SIA + + L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG------KVSIA--VIKGLT 118
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + I+HRD+K SNIL+ KL DFG+ G D S G+ Y+
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLID----SMANSFVGTRSYM 170
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
L S +SD++S G+ L+E+ G
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGS-------RK---IFLDEVS-------VLLR 62
V F YL LG G FG V V E+ G RK I DEV+ VL
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 63 VSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
HP L L + + ++L ++EY LF ++ V + +I
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGELF-----FHLSRERVFTEERARFYGAEIV 115
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
ALEYLHS+ +++RDIK N++L D H K+ DFGLCK G + G+
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT----MKXFCGT 168
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L D + GV++ E++ G
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG---SRKIF------------LDEVSVLLRVSHPNLV 69
F ++ELG GN G V +V + G +RK+ + E+ VL + P +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYG----QSLGVLSWSNRLSIALDIARALE 125
G G GE + +E++ SL D++ G Q LG ++SIA + + L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG------KVSIA--VIKGLT 118
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + I+HRD+K SNIL+ KL DFG+ G D S G+ Y+
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLID----SMANSFVGTRSYM 170
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
L S +SD++S G+ L+E+ G
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG---SRKIF------------LDEVSVLLRVSHPNLV 69
F L +G G+FG V + ++ R + KI E++VL + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
G L+ + +++EYL S D + G ++ +I + L+YLHS
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRA------GPFDEFQIATMLKEILKGLDYLHS 138
Query: 130 QADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
+ IHRDIK++N+LL + KLADFG+ G D + KR T + F ++
Sbjct: 139 EKK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTD-TQIKRNTFVGTPF-WMAPEV 191
Query: 190 LNTGFVSTKSDVYSFGVLLLELITG 214
+ +K+D++S G+ +EL G
Sbjct: 192 IQQSAYDSKADIWSLGITAIELAKG 216
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 33/217 (15%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGGSR-KIFLDEV--------------------SVLLRV 63
F L LG G +G V +V + G + KIF +V ++L V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
HP +V L+ G+ L+LEYL+ LF ++ + G+ +I+ A
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-----EREGIFMEDTACFYLAEISMA 133
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG 183
L +LH + II+RD+K NI+L H KL DFGLCK + G+
Sbjct: 134 LGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG----TVTHXFCGTIE 186
Query: 184 YVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
Y+ L + D +S G L+ +++TG G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 100/233 (42%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + L G FG A+K + E +
Sbjct: 10 APNQALLRI-LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 68
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 128 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 176
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 40/226 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L + + +L+LE ++ LFD + Q LS S I + YLH+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFD----FLAQKES-LSEEEATSFIKQILDGVNYLHT 133
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ I H D+K NI+L+D N H KL DFGL D K +I G+ +V
Sbjct: 134 KK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFK---NIFGTPEFV 185
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA---TLAEWT 228
+N + ++D++S GV+ L++G G TLA T
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 28 LAELGDGNFGAVK-------------RVMEE---RGGSRKIFLDEVSVLLRVSHPNLVGL 71
L +G GNF VK R++++ S + EV ++ ++HPN+V L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+ L++EY + +FD Y + G + + I A++Y H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFD-----YLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN-YL 190
I+HRD+K+ N+LL D + K+ADFG F + + + GS Y +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----KLDTFCGSPPYAAPELFQ 185
Query: 191 NTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
+ + DV+S GV+L L++G G L E E R K
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLRGK 229
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG---SRKIF------------LDEVSVLLRVSHPNLV 69
F ++ELG GN G V +V + G +RK+ + E+ VL + P +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYG----QSLGVLSWSNRLSIALDIARALE 125
G G GE + +E++ SL D++ G Q LG ++SIA + + L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG------KVSIA--VIKGLT 118
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + I+HRD+K SNIL+ KL DFG+ G D S G+ Y+
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLID----SMANSFVGTRSYM 170
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
L S +SD++S G+ L+E+ G
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 40/226 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L + + +L+LE ++ LFD + Q LS S I + YLH+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFD----FLAQKES-LSEEEATSFIKQILDGVNYLHT 133
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ I H D+K NI+L+D N H KL DFGL ++ +I G+ +V
Sbjct: 134 KK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKNIFGTPEFV 185
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA---TLAEWT 228
+N + ++D++S GV+ L++G G TLA T
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG---SRKIF------------LDEVSVLLRVSHPNLV 69
F ++ELG GN G V +V + G +RK+ + E+ VL + P +V
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYG----QSLGVLSWSNRLSIALDIARALE 125
G G GE + +E++ SL D++ G Q LG ++SIA + + L
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG------KVSIA--VIKGLT 145
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + I+HRD+K SNIL+ KL DFG+ G D S G+ Y+
Sbjct: 146 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLID----SMANSFVGTRSYM 197
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
L S +SD++S G+ L+E+ G
Sbjct: 198 SPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 34/220 (15%)
Query: 23 TSFVYLAELGDGNFG------------------AVKRVMEERGG-SRKIFLDEVSVLLRV 63
T F + LG G FG A+K + E + K LDE V+ V
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVLSWSNRLSIALDIA 121
+P++ LLG CL QL+ + + L D R H S +L+W + IA
Sbjct: 72 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 124
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
+ YL D ++HRD+ + N+L+ H K+ DFGL KL + K
Sbjct: 125 EGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVP 179
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
++ + + +SDV+S+GV + EL+T G K G
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 219
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 100/233 (42%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + L G FG A+K + E +
Sbjct: 3 APNQALLRI-LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 61
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFGL KL
Sbjct: 121 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGA 169
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 100/233 (42%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 10 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 68
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFG KL
Sbjct: 128 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGA 176
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 40/226 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L + + +L+LE ++ LFD + Q LS S I + YLH+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFD----FLAQKES-LSEEEATSFIKQILDGVNYLHT 133
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ I H D+K NI+L+D N H KL DFGL D K +I G+ +V
Sbjct: 134 KK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFK---NIFGTPEFV 185
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA---TLAEWT 228
+N + ++D++S GV+ L++G G TLA T
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 100/233 (42%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 5 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 63
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFG KL
Sbjct: 123 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGA 171
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 100/233 (42%), Gaps = 35/233 (15%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFG------------------AVKRVMEERGG-SR 50
A N +RI + T F + LG G FG A+K + E +
Sbjct: 3 APNQALLRI-LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 61
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD--RMHTYYGQSLGVL 108
K LDE V+ V +P++ LLG CL QL+ + + L D R H S +L
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+W + IA+ + YL D ++HRD+ + N+L+ H K+ DFG KL
Sbjct: 121 NW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGA 169
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ K ++ + + +SDV+S+GV + EL+T G K G
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 40/226 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L + + +L+LE ++ LFD + Q LS S I + YLH+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFD----FLAQKES-LSEEEATSFIKQILDGVNYLHT 133
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ I H D+K NI+L+D N H KL DFGL D K +I G+ +V
Sbjct: 134 KK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFK---NIFGTPEFV 185
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA---TLAEWT 228
+N + ++D++S GV+ L++G G TLA T
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 30 ELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLV 69
ELG G+FG A+K V E +I FL+E SV+ + ++V
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQS-----LGVLSWSNRLSIALDIARAL 124
LLG + L+++E + L + + + L S S + +A +IA +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG- 183
YL++ +HRD+ + N ++ +D K+ DFG+ + D R KG G
Sbjct: 137 AYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR-------KGGKGL 186
Query: 184 ----YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ L G +T SDV+SFGV+L E+ T
Sbjct: 187 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 27/216 (12%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRVSHP-NLVGLLGFCLEKGEQLLLLEYLANKSLFD 95
AVK + E S + + E+ +L+ + H N+V LLG C + G L+++ F
Sbjct: 63 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK---FG 119
Query: 96 RMHTY----------YGQSL-----GVLSWSNRLSIALDIARALEYLHSQADPPIIHRDI 140
+ TY Y ++ L+ + + + +A+ +E+L S+ IHRD+
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 176
Query: 141 KSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSD 200
+ NILL + N K+ DFGL + + DP+ R+ + ++ + + +SD
Sbjct: 177 AARNILLSEKNVVKICDFGLAR-DIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSD 234
Query: 201 VYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
V+SFGVLL E+ + S + E E CRR K
Sbjct: 235 VWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 268
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG---SRKIF------------LDEVSVLLRVSHPNLV 69
F ++ELG GN G V +V + G +RK+ + E+ VL + P +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYG----QSLGVLSWSNRLSIALDIARALE 125
G G GE + +E++ SL D++ G Q LG ++SIA + + L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG------KVSIA--VIKGLT 118
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + I+HRD+K SNIL+ KL DFG+ G D S G+ Y+
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLID----SMANSFVGTRSYM 170
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
L S +SD++S G+ L+E+ G
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG---SRKIF------------LDEVSVLLRVSHPNLV 69
F ++ELG GN G V +V + G +RK+ + E+ VL + P +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYG----QSLGVLSWSNRLSIALDIARALE 125
G G GE + +E++ SL D++ G Q LG ++SIA + + L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG------KVSIA--VIKGLT 118
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + I+HRD+K SNIL+ KL DFG+ G D S G+ Y+
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLID----SMANSFVGTRSYM 170
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
L S +SD++S G+ L+E+ G
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 40/226 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L + + +L+LE ++ LFD + Q LS S I + YLH+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFD----FLAQKES-LSEEEATSFIKQILDGVNYLHT 133
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ I H D+K NI+L+D N H KL DFGL D K +I G+ +V
Sbjct: 134 KK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFK---NIFGTPEFV 185
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA---TLAEWT 228
+N + ++D++S GV+ L++G G TLA T
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 28 LAELGDGNFGAVKRVMEERGGS---------------RKIFLDEVSVLLRVSH-PNLVGL 71
L E+G G +G+V +++ + G +K L ++ V++R S P +V
Sbjct: 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTY-YGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
G +G+ + +E ++ FD+ + Y Y V+ I L +AL +L
Sbjct: 87 YGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 131 ADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG--YVDTN 188
IIHRDIK SNILL + KL DFG+ G D R + +D +
Sbjct: 145 LK--IIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSIAKTRDAGCRPYMAPERIDPS 200
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITG 214
G+ +SDV+S G+ L EL TG
Sbjct: 201 ASRQGY-DVRSDVWSLGITLYELATG 225
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRVSHP-NLVGLLGFCLEKGEQLLLL---------- 85
AVK + E S + + E+ +L+ + H N+V LLG C + G L+++
Sbjct: 63 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 122
Query: 86 EYLANKSLFDRMHTYYGQSL--GVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSS 143
YL +K + Y + L L+ + + + +A+ +E+L S+ IHRD+ +
Sbjct: 123 TYLRSKR--NEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAAR 177
Query: 144 NILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYS 203
NILL + N K+ DFGL + DP+ R+ + ++ + + +SDV+S
Sbjct: 178 NILLSEKNVVKICDFGLAR-DIXKDPDX-VRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 204 FGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
FGVLL E+ + S + E E CRR K
Sbjct: 236 FGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 266
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 30 ELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLV 69
ELG G+FG A+K V E +I FL+E SV+ + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQS-----LGVLSWSNRLSIALDIARAL 124
LLG + L+++E + L + + + L S S + +A +IA +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG- 183
YL++ +HRD+ + N ++ +D K+ DFG+ + D R KG G
Sbjct: 146 AYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR-------KGGKGL 195
Query: 184 ----YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ L G +T SDV+SFGV+L E+ T
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 18 ELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE +A LFD + L+ I + YLHS
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFD-----FLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 133 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPEFV 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
+N + ++D++S GV+ L++G G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRVSHP-NLVGLLGFCLEKGEQLLLLEYLANKSLFD 95
AVK + E S + + E+ +L+ + H N+V LLG C + G L+++ F
Sbjct: 52 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK---FG 108
Query: 96 RMHTYYGQSLG---------------VLSWSNRLSIALDIARALEYLHSQADPPIIHRDI 140
+ TY L+ + + + +A+ +E+L S+ IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 141 KSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSD 200
+ NILL + N K+ DFGL + + DP+ R+ + ++ + + +SD
Sbjct: 166 AARNILLSEKNVVKICDFGLAR-DIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 201 VYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
V+SFGVLL E+ + S + E E CRR K
Sbjct: 224 VWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 257
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRVSHP-NLVGLLGFCLEKGEQLLLLEYLANKSLFD 95
AVK + E S + + E+ +L+ + H N+V LLG C + G L+++ F
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK---FG 117
Query: 96 RMHTYYGQSLG---------------VLSWSNRLSIALDIARALEYLHSQADPPIIHRDI 140
+ TY L+ + + + +A+ +E+L S+ IHRD+
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 141 KSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSD 200
+ NILL + N K+ DFGL + + DP+ R+ + ++ + + +SD
Sbjct: 175 AARNILLSEKNVVKICDFGLAR-DIYKDPDX-VRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 201 VYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
V+SFGVLL E+ + S + E E CRR K
Sbjct: 233 VWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 266
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRVSHP-NLVGLLGFCLEKGEQLLLLEYLANKSLFD 95
AVK + E S + + E+ +L+ + H N+V LLG C + G L+++ F
Sbjct: 52 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK---FG 108
Query: 96 RMHTYYGQSLG---------------VLSWSNRLSIALDIARALEYLHSQADPPIIHRDI 140
+ TY L+ + + + +A+ +E+L S+ IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 141 KSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSD 200
+ NILL + N K+ DFGL + + DP+ R+ + ++ + + +SD
Sbjct: 166 AARNILLSEKNVVKICDFGLAR-DIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 201 VYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
V+SFGVLL E+ + S + E E CRR K
Sbjct: 224 VWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 257
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 18 IGVGATSFVYLAEL------GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGL 71
+G GA V+LAE D AVK + E +R+ F E +L + H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 72 LGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSL--------GVLSWSNRLSIALDIA 121
G C E L++ EY+ + L F R H + L G L L++A +A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
+ YL A +HRD+ + N L+ K+ DFG+ + D R +T +
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML--P 200
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ + +T+SDV+SFGV+L E+ T
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGG---SRKIFLDEV--------------SVLLR 62
V F YL LG G FG V V E+ G + KI EV VL
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 63 VSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
HP L L + + ++L ++EY LF ++ V S +I
Sbjct: 66 SRHPFLTAL-KYSFQTHDRLCFVMEYANGGELF-----FHLSRERVFSEDRARFYGAEIV 119
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK-- 179
AL+YLHS+ + +++RD+K N++L D H K+ DFGLCK G K ++K
Sbjct: 120 SALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-------IKDGATMKXF 170
Query: 180 -GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
G+ Y+ L D + GV++ E++ G
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGG---SRKIFLDEV--------------SVLLR 62
V F YL LG G FG V V E+ G + KI EV VL
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 63 VSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
HP L L + + ++L ++EY LF ++ V S +I
Sbjct: 67 SRHPFLTAL-KYSFQTHDRLCFVMEYANGGELF-----FHLSRERVFSEDRARFYGAEIV 120
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK-- 179
AL+YLHS+ + +++RD+K N++L D H K+ DFGLCK G K ++K
Sbjct: 121 SALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-------IKDGATMKXF 171
Query: 180 -GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
G+ Y+ L D + GV++ E++ G
Sbjct: 172 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 207
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 28 LAELGDGNFGAVK-------------RVMEE---RGGSRKIFLDEVSVLLRVSHPNLVGL 71
L +G GNF VK R++++ S + EV ++ ++HPN+V L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+ L++EY + +FD Y + G + + I A++Y H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFD-----YLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN-YL 190
I+HRD+K+ N+LL D + K+ADFG F + + GS Y +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----KLDEFCGSPPYAAPELFQ 185
Query: 191 NTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
+ + DV+S GV+L L++G G L E E R K
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLRGK 229
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 87/166 (52%), Gaps = 10/166 (6%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ E++ N SL ++ Q+ G +
Sbjct: 78 RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL----DSFLRQNDGQFT 133
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL AD +HRD+ + NIL+ + K++DFGL + +D
Sbjct: 134 VIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE-DDT 189
Query: 170 NRPKRQTSIKGSFG--YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ P +++ G + + ++ SDV+S+G+++ E+++
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 18 IGVGATSFVYLAEL------GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGL 71
+G GA V+LAE D AVK + E +R+ F E +L + H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 72 LGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSL--------GVLSWSNRLSIALDIA 121
G C E L++ EY+ + L F R H + L G L L++A +A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
+ YL A +HRD+ + N L+ K+ DFG+ + D R +T +
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML--P 194
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ + +T+SDV+SFGV+L E+ T
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGG---SRKIFLDEV--------------SVLLR 62
V F YL LG G FG V V E+ G + KI EV VL
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 63 VSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
HP L L + + ++L ++EY LF ++ V S +I
Sbjct: 65 SRHPFLTAL-KYSFQTHDRLCFVMEYANGGELF-----FHLSRERVFSEDRARFYGAEIV 118
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK-- 179
AL+YLHS+ + +++RD+K N++L D H K+ DFGLCK G K ++K
Sbjct: 119 SALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-------IKDGATMKXF 169
Query: 180 -GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
G+ Y+ L D + GV++ E++ G
Sbjct: 170 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 205
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRVSHP-NLVGLLGFCLEKGEQLLLLEYLANKSLFD 95
AVK + E S + + E+ +L+ + H N+V LLG C + G L+++ F
Sbjct: 98 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK---FG 154
Query: 96 RMHTYYGQSLG---------------VLSWSNRLSIALDIARALEYLHSQADPPIIHRDI 140
+ TY L+ + + + +A+ +E+L S+ IHRD+
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 211
Query: 141 KSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSD 200
+ NILL + N K+ DFGL + + DP+ R+ + ++ + + +SD
Sbjct: 212 AARNILLSEKNVVKICDFGLAR-DIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSD 269
Query: 201 VYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
V+SFGVLL E+ + S + E E CRR K
Sbjct: 270 VWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 303
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 17 RIGVGATSFVYLAELGD-GNFGAVKRVMEERGGS--RKIFLDEVSVLLRVSHPNLVGLLG 73
+IG G+ V+ D G A+K+ +E +KI L E+ +L ++ HPNLV LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
K L+ EY + L + G ++ SI +A+ + H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK-----SITWQTLQAVNFCHKHN-- 122
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKL--GP---FNDPNRPKRQTSIKGSFGYVDTN 188
IHRD+K NIL+ + KL DFG +L GP ++D + S + G DT
Sbjct: 123 -CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG--DTQ 179
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
Y DV++ G + EL++G+ G + + +
Sbjct: 180 Y------GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ 211
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRVSHP-NLVGLLGFCLEKGEQLLLLEYLANKSLFD 95
AVK + E S + + E+ +L+ + H N+V LLG C + G L+++ F
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK---FG 117
Query: 96 RMHTYYGQSLG---------------VLSWSNRLSIALDIARALEYLHSQADPPIIHRDI 140
+ TY L+ + + + +A+ +E+L S+ IHRD+
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 141 KSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSD 200
+ NILL + N K+ DFGL + + DP+ R+ + ++ + + +SD
Sbjct: 175 AARNILLSEKNVVKICDFGLAR-DIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 201 VYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
V+SFGVLL E+ + S + E E CRR K
Sbjct: 233 VWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 266
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRVSHP-NLVGLLGFCLEKGEQLLLL---------- 85
AVK + E S + + E+ +L+ + H N+V LLG C + G L+++
Sbjct: 62 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 121
Query: 86 EYLANK-SLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSN 144
YL +K + F T L+ + + + +A+ +E+L S+ IHRD+ + N
Sbjct: 122 TYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARN 178
Query: 145 ILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSF 204
ILL + N K+ DFGL + DP+ R+ + ++ + + +SDV+SF
Sbjct: 179 ILLSEKNVVKICDFGLAR-DIXKDPDX-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 205 GVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
GVLL E+ + S + E E CRR K
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 266
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 13 DFRIRIGVGATSFVYLAE-LGDGNFGAVKRVMEER-GGSRKIFLDEVSVLLRVSHPNLVG 70
+F+ +G GA S V LAE G AVK + ++ G +E++VL ++ H N+V
Sbjct: 25 EFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 71 LLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
L L+++ ++ LFDR+ G + + ++ + A+ YLH
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGELFDRI-----VEKGFYTEKDASTLIRQVLDAVYYLHRM 139
Query: 131 ADPPIIHRDIKSSNILLI-DDNHAK--LADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
I+HRD+K N+L D +K ++DFGL K+ D ++ G+ GYV
Sbjct: 140 G---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV-----MSTACGTPGYVAP 191
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELITG 214
L S D +S GV+ L+ G
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 14 FRIRIGVGATSFVYLAEL------GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ +G GA V+LAE D AVK + E +R+ F E +L + H +
Sbjct: 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSL--------GVLSWSNRLSIA 117
+V G C E L++ EY+ + L F R H + L G L L++A
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 118 LDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTS 177
+A + YL A +HRD+ + N L+ K+ DFG+ + D R +T
Sbjct: 165 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 178 IKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ ++ + +T+SDV+SFGV+L E+ T
Sbjct: 222 L--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG---SRKIF------------LDEVSVLLRVSHPNLV 69
F ++ELG GN G V +V + G +RK+ + E+ VL + P +V
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYG----QSLGVLSWSNRLSIALDIARALE 125
G G GE + +E++ SL D++ G Q LG ++SIA + + L
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG------KVSIA--VIKGLT 121
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
YL + I+HRD+K SNIL+ KL DFG+ G D + G+ Y+
Sbjct: 122 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLID----EMANEFVGTRSYM 173
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
L S +SD++S G+ L+E+ G
Sbjct: 174 SPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 28 LAELGDGNFGAVK---RVMEERGGSRKI-------------FLDEVSVLLRVSHPNLVGL 71
L +G GNF VK ++ R + KI EV ++ ++HPN+V L
Sbjct: 17 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 76
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+ L++EY + +FD Y + G + S I A++Y H +
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFD-----YLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN-YL 190
I+HRD+K+ N+LL D + K+ADFG N+ + + GS Y +
Sbjct: 132 ---IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDTFCGSPPYAAPELFQ 183
Query: 191 NTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
+ + DV+S GV+L L++G G L E E R K
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLRGK 227
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 19/188 (10%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRVSHP-NLVGLLGFCLEKGEQLLLL---------- 85
AVK + E S + + E+ +L+ + H N+V LLG C + G L+++
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
Query: 86 EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNI 145
YL +K + Y L+ + + + +A+ +E+L S+ IHRD+ + NI
Sbjct: 121 TYLRSKR--NEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAARNI 175
Query: 146 LLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFG 205
LL + N K+ DFGL + + DP+ R+ + ++ + + +SDV+SFG
Sbjct: 176 LLSEKNVVKIXDFGLAR-DIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 233
Query: 206 VLLLELIT 213
VLL E+ +
Sbjct: 234 VLLWEIFS 241
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 28 LAELGDGNFGAVK-------------RVMEE---RGGSRKIFLDEVSVLLRVSHPNLVGL 71
L +G GNF VK +++++ S + EV ++ ++HPN+V L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+ L++EY + +FD Y + G + + I A++Y H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFD-----YLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN-YL 190
I+HRD+K+ N+LL D + K+ADFG F + + + GS Y +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----KLDTFCGSPPYAAPELFQ 185
Query: 191 NTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
+ + DV+S GV+L L++G G L E E R K
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLRGK 229
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 28 LAELGDGNFGAVK-------------RVMEE---RGGSRKIFLDEVSVLLRVSHPNLVGL 71
L +G GNF VK +++++ S + EV ++ ++HPN+V L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+ L++EY + +FD Y + G + + I A++Y H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFD-----YLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN-YL 190
I+HRD+K+ N+LL D + K+ADFG F + + + GS Y +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----KLDTFCGSPPYAAPELFQ 185
Query: 191 NTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
+ + DV+S GV+L L++G G L E E R K
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLRGK 229
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 101/245 (41%), Gaps = 27/245 (11%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEER--GGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
IG G + V LA + G A+K +M++ G E+ L + H ++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 75 CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPP 134
+ ++LEY LFD Y S LS + I A+ Y+HSQ
Sbjct: 77 LETANKIFMVLEYCPGGELFD-----YIISQDRLSEEETRVVFRQIVSAVAYVHSQG--- 128
Query: 135 IIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN-TG 193
HRD+K N+L + + KL DFGLC N+ + GS Y +
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKP---KGNKDYHLQTCCGSLAYAAPELIQGKS 185
Query: 194 FVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVEVW---------AQML 244
++ +++DV+S G+LL L+ G +A + + R +V W QML
Sbjct: 186 YLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQML 245
Query: 245 --DPK 247
DPK
Sbjct: 246 QVDPK 250
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 28 LAELGDGNFGAVK-------------RVMEE---RGGSRKIFLDEVSVLLRVSHPNLVGL 71
L +G GNF VK +++++ S + EV ++ ++HPN+V L
Sbjct: 12 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 71
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+ L++EY + +FD Y + G + + I A++Y H +
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFD-----YLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN-YL 190
I+HRD+K+ N+LL D + K+ADFG F + + + GS Y +
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----KLDTFCGSPPYAAPELFQ 178
Query: 191 NTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
+ + DV+S GV+L L++G G L E E R K
Sbjct: 179 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLRGK 222
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 49 SRKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLG 106
R+ FL E S++ + HPN+V L G ++++E++ N +L F R H G
Sbjct: 87 QRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD------G 140
Query: 107 VLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPF 166
+ + + IA + YL AD +HRD+ + NIL+ + K++DFGL ++
Sbjct: 141 QFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIE- 196
Query: 167 NDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+DP T K + + ++ SDV+S+G+++ E+++
Sbjct: 197 DDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 49 SRKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVL 108
R+ FL E S++ + HPN++ L G + +++ EY+ N SL T+ ++ G
Sbjct: 66 QRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL----DTFLKKNDGQF 121
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+ + + I+ ++YL +D +HRD+ + NIL+ + K++DFGL ++ +D
Sbjct: 122 TVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DD 177
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
P K + + ++ SDV+S+G+++ E+++
Sbjct: 178 PEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 31/222 (13%)
Query: 31 LGDGNFGAVK---RVMEERGGSRKI-------------FLDEVSVLLRVSHPNLVGLLGF 74
+G GNF VK V+ R + KI EV ++ ++HPN+V L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 75 CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPP 134
+ L++EY + +FD Y + G + + I A++Y H +
Sbjct: 83 IETEKTLYLVMEYASGGEVFD-----YLVAHGRMKEKEARAKFRQIVSAVQYCHQKY--- 134
Query: 135 IIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN-YLNTG 193
I+HRD+K+ N+LL D + K+ADFG N+ + + GS Y +
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFS-----NEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 194 FVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
+ + DV+S GV+L L++G G L E E R K
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLRGK 230
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRVSHP-NLVGLLGFCLEKGEQLLLLEYLANKSLFD 95
AVK + E S + + E+ +L+ + H N+V LLG C + G L+++ F
Sbjct: 52 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK---FG 108
Query: 96 RMHTYYGQSLG---------------VLSWSNRLSIALDIARALEYLHSQADPPIIHRDI 140
+ TY L+ + + + +A+ +E+L S+ IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 141 KSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSD 200
+ NILL + N K+ DFGL + DP+ R+ + ++ + + +SD
Sbjct: 166 AARNILLSEKNVVKICDFGLAR-DIXKDPDX-VRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 201 VYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
V+SFGVLL E+ + S + E E CRR K
Sbjct: 224 VWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 257
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 28 LAELGDGNFGAVK---RVMEERGGSRKI-------------FLDEVSVLLRVSHPNLVGL 71
L +G GNF VK ++ R + KI EV ++ ++HPN+V L
Sbjct: 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+ L++EY + +FD Y + G + S I A++Y H +
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFD-----YLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN-YL 190
I+HRD+K+ N+LL D + K+ADFG N+ + + G+ Y +
Sbjct: 135 ---IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDAFCGAPPYAAPELFQ 186
Query: 191 NTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
+ + DV+S GV+L L++G G L E E R K
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLRGK 230
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 30 ELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLV 69
ELG G+FG A+K V E +I FL+E SV+ + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQS-----LGVLSWSNRLSIALDIARAL 124
LLG + L+++E + L + + + L S S + +A +IA +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG- 183
YL++ +HRD+ + N ++ +D K+ DFG+ + D R KG G
Sbjct: 145 AYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-------KGGKGL 194
Query: 184 ----YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ L G +T SDV+SFGV+L E+ T
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 30 ELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLV 69
ELG G+FG A+K V E +I FL+E SV+ + ++V
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQS-----LGVLSWSNRLSIALDIARAL 124
LLG + L+++E + L + + + L S S + +A +IA +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG- 183
YL++ +HRD+ + N ++ +D K+ DFG+ + D R KG G
Sbjct: 143 AYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-------KGGKGL 192
Query: 184 ----YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ L G +T SDV+SFGV+L E+ T
Sbjct: 193 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 30 ELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLV 69
ELG G+FG A+K V E +I FL+E SV+ + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQS-----LGVLSWSNRLSIALDIARAL 124
LLG + L+++E + L + + + L S S + +A +IA +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG- 183
YL++ +HRD+ + N ++ +D K+ DFG+ + D R KG G
Sbjct: 139 AYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-------KGGKGL 188
Query: 184 ----YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ L G +T SDV+SFGV+L E+ T
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 30 ELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLV 69
ELG G+FG A+K V E +I FL+E SV+ + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQS-----LGVLSWSNRLSIALDIARAL 124
LLG + L+++E + L + + + L S S + +A +IA +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG- 183
YL++ +HRD+ + N ++ +D K+ DFG+ + D R KG G
Sbjct: 152 AYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-------KGGKGL 201
Query: 184 ----YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ L G +T SDV+SFGV+L E+ T
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 30 ELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLV 69
ELG G+FG A+K V E +I FL+E SV+ + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQS-----LGVLSWSNRLSIALDIARAL 124
LLG + L+++E + L + + + L S S + +A +IA +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG- 183
YL++ +HRD+ + N ++ +D K+ DFG+ + D R KG G
Sbjct: 145 AYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-------KGGKGL 194
Query: 184 ----YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ L G +T SDV+SFGV+L E+ T
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRVSHP-NLVGLLGFCLEKGEQLLLLEYLANKSLFD 95
AVK + E S + + E+ +L+ + H N+V LLG C + G L+++ F
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK---FG 117
Query: 96 RMHTYYGQSLG---------------VLSWSNRLSIALDIARALEYLHSQADPPIIHRDI 140
+ TY L+ + + + +A+ +E+L S+ IHRD+
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174
Query: 141 KSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSD 200
+ NILL + N K+ DFGL + DP+ R+ + ++ + + +SD
Sbjct: 175 AARNILLSEKNVVKICDFGLAR-DIXKDPDX-VRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 201 VYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
V+SFGVLL E+ + S + E E CRR K
Sbjct: 233 VWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 266
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ EY+ N SL + + Q +
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-- 118
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL +D +HRD+ + NIL+ + K++DFGL ++ +DP
Sbjct: 119 --QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDP 172
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G++L E+++
Sbjct: 173 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 37/215 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F VK+ E+ RG SR+ EVS+L + HPN++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+ E +A LFD + L+ I + YLHS
Sbjct: 78 TLHEVYENKTDVILIGELVAGGELFD-----FLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
I H D+K NI+L+D N K+ DFGL F + + +I G+ +V
Sbjct: 133 LQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-----NIFGTPEFV 184
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
+N + ++D++S GV+ L++G G
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 30 ELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLV 69
ELG G+FG A+K V E +I FL+E SV+ + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQS-----LGVLSWSNRLSIALDIARAL 124
LLG + L+++E + L + + + L S S + +A +IA +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG- 183
YL++ +HRD+ + N ++ +D K+ DFG+ + D R KG G
Sbjct: 146 AYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-------KGGKGL 195
Query: 184 ----YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ L G +T SDV+SFGV+L E+ T
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ EY+ N SL + + Q +
Sbjct: 78 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-- 135
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL +D +HRD+ + NIL+ + K++DFGL ++ +DP
Sbjct: 136 --QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDP 189
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G++L E+++
Sbjct: 190 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 43 MEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEY-LANKSLFDRMHTYY 101
++ RG +++ E+++L ++ HPN+V L+ + E L + + L N+ + T
Sbjct: 74 IQPRGPIEQVY-QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-- 130
Query: 102 GQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGL 160
L LS D+ + +EYLH Q IIHRDIK SN+L+ +D H K+ADFG+
Sbjct: 131 ---LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGV 183
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ EY+ N SL + + Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL +D +HRD+ + NIL+ + K++DFGL ++ +DP
Sbjct: 148 --QLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDP 201
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G++L E+++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 38 AVKRVMEERGGS-RKIFLDEVSVLLRVSHP-NLVGLLGFCLEKGEQLLLLEYLANKSLFD 95
AVK + E S + + E+ +L+ + H N+V LLG C + G L+++ F
Sbjct: 52 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK---FG 108
Query: 96 RMHTYYGQSLG---------------VLSWSNRLSIALDIARALEYLHSQADPPIIHRDI 140
+ TY L+ + + + +A+ +E+L S+ IHRD+
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 165
Query: 141 KSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSD 200
+ NILL + N K+ DFGL + DP+ R+ + ++ + + +SD
Sbjct: 166 AARNILLSEKNVVKICDFGLAR-DIXKDPDX-VRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 201 VYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
V+SFGVLL E+ + S + E E CRR K
Sbjct: 224 VWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 257
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 28 LAELGDGNFGAVK-------------RVMEE---RGGSRKIFLDEVSVLLRVSHPNLVGL 71
L +G GNF VK +++++ S + EV ++ ++HPN+V L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+ L++EY + +FD Y + G + + I A++Y H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFD-----YLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN-YL 190
I+HRD+K+ N+LL D + K+ADFG F + + + G+ Y +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-----KLDAFCGAPPYAAPELFQ 185
Query: 191 NTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
+ + DV+S GV+L L++G G L E E R K
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLRGK 229
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 30 ELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLV 69
ELG G+FG A+K V E +I FL+E SV+ + ++V
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQS-----LGVLSWSNRLSIALDIARAL 124
LLG + L+++E + L + + + L S S + +A +IA +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG- 183
YL++ +HRD+ + N ++ +D K+ DFG+ + D R KG G
Sbjct: 174 AYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-------KGGKGL 223
Query: 184 ----YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ L G +T SDV+SFGV+L E+ T
Sbjct: 224 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ EY+ N SL + + Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL +D +HRD+ + NIL+ + K++DFGL ++ +DP
Sbjct: 148 --QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLE-DDP 201
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G++L E+++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 44/226 (19%)
Query: 20 VGATSFVYLAELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSV 59
V L ELG G+FG AVK V E +I FL+E SV
Sbjct: 11 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 70
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLAN-------KSLFDRMHTYYGQSLGVLSWSN 112
+ + ++V LLG + L+++E +A+ +SL G+ L
Sbjct: 71 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--E 128
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+ +A +IA + YL+++ +HRD+ + N ++ D K+ DFG+ + D R
Sbjct: 129 MIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR- 184
Query: 173 KRQTSIKGSFGYVDTNY-----LNTGFVSTKSDVYSFGVLLLELIT 213
KG G + + L G +T SD++SFGV+L E+ +
Sbjct: 185 ------KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 39/218 (17%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F V++ ++ RG SR+ EV++L + HPN++
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE ++ LFD + +SL + L LD + YLHS
Sbjct: 72 TLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILD---GVHYLHS 126
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLC-KLGPFNDPNRPKRQTSIKGSFGY 184
+ I H D+K NI+L+D N KL DFG+ K+ N+ +I G+ +
Sbjct: 127 KR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK------NIFGTPEF 177
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
V +N + ++D++S GV+ L++G G
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET 215
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 30 ELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLV 69
ELG G+FG A+K V E +I FL+E SV+ + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 70 GLLGFCLEKGEQLLLLEYLAN---KSLFDRMHTYYGQS--LGVLSWSNRLSIALDIARAL 124
LLG + L+++E + KS + + L S S + +A +IA +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG- 183
YL++ +HRD+ + N ++ +D K+ DFG+ + D R KG G
Sbjct: 152 AYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-------KGGKGL 201
Query: 184 ----YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ L G +T SDV+SFGV+L E+ T
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 44/226 (19%)
Query: 20 VGATSFVYLAELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSV 59
V L ELG G+FG AVK V E +I FL+E SV
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLAN-------KSLFDRMHTYYGQSLGVLSWSN 112
+ + ++V LLG + L+++E +A+ +SL G+ L
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--E 131
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+ +A +IA + YL+++ +HRD+ + N ++ D K+ DFG+ + D R
Sbjct: 132 MIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR- 187
Query: 173 KRQTSIKGSFGYVDTNY-----LNTGFVSTKSDVYSFGVLLLELIT 213
KG G + + L G +T SD++SFGV+L E+ +
Sbjct: 188 ------KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 44/226 (19%)
Query: 20 VGATSFVYLAELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSV 59
V L ELG G+FG AVK V E +I FL+E SV
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLAN-------KSLFDRMHTYYGQSLGVLSWSN 112
+ + ++V LLG + L+++E +A+ +SL G+ L
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--E 131
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+ +A +IA + YL+++ +HRD+ + N ++ D K+ DFG+ + D R
Sbjct: 132 MIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR- 187
Query: 173 KRQTSIKGSFGYVDTNY-----LNTGFVSTKSDVYSFGVLLLELIT 213
KG G + + L G +T SD++SFGV+L E+ +
Sbjct: 188 ------KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 30 ELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLV 69
ELG G+FG A+K V E +I FL+E SV+ + ++V
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 70 GLLGFCLEKGEQLLLLEYLAN---KSLFDRMHTYYGQS--LGVLSWSNRLSIALDIARAL 124
LLG + L+++E + KS + + L S S + +A +IA +
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG- 183
YL++ +HRD+ + N ++ +D K+ DFG+ + D R KG G
Sbjct: 142 AYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-------KGGKGL 191
Query: 184 ----YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ L G +T SDV+SFGV+L E+ T
Sbjct: 192 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 44/230 (19%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F V++ ++ RG SR+ EV++L + HPN++
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE ++ LFD + +SL + L LD + YLHS
Sbjct: 79 TLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILD---GVHYLHS 133
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLC-KLGPFNDPNRPKRQTSIKGSFGY 184
+ I H D+K NI+L+D N KL DFG+ K+ N+ +I G+ +
Sbjct: 134 KR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK------NIFGTPEF 184
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRN 234
V +N + ++D++S GV+ L++G S L E +E N
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG-----ASPFLGETKQETLTN 229
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ EY+ N SL + + Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL +D +HRD+ + NIL+ + K++DFGL ++ +DP
Sbjct: 148 --QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDP 201
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G++L E+++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ EY+ N SL + + Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL +D +HRD+ + NIL+ + K++DFGL ++ +DP
Sbjct: 148 --QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDP 201
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G++L E+++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ EY+ N SL + + Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL +D +HRD+ + NIL+ + K++DFGL ++ +DP
Sbjct: 148 --QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDP 201
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G++L E+++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ EY+ N SL + + Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL +D +HRD+ + NIL+ + K++DFGL ++ +DP
Sbjct: 148 --QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDP 201
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G++L E+++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
+HP LVGL + ++EY+ L ++ Q L + + +I+ A
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-----FHMQRQRKLPEEHARFYSAEISLA 133
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTS-IKGSF 182
L YLH + II+RD+K N+LL + H KL D+G+CK G RP TS G+
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-----RPGDTTSXFCGTP 185
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L D ++ GVL+ E++ G
Sbjct: 186 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 217
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ EY+ N SL + + Q +
Sbjct: 88 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-- 145
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL +D +HRD+ + NIL+ + K++DFGL ++ +DP
Sbjct: 146 --QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDP 199
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G++L E+++
Sbjct: 200 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 30/211 (14%)
Query: 21 GATSFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVS 64
G +F + ++G+G +G V + + G +KI LD E+S+L ++
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 65 HPNLVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIAR 122
HPN+V LL + + L+ E+L K D G L ++ S + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQ 114
Query: 123 ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSF 182
L + HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 115 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTLWY 169
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 170 RAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 44/230 (19%)
Query: 30 ELGDGNFGAVKRVMEE--------------------RGGSRKIFLDEVSVLLRVSHPNLV 69
ELG G F V++ ++ RG SR+ EV++L + HPN++
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L K + +L+LE ++ LFD + +SL + L LD + YLHS
Sbjct: 93 TLHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILD---GVHYLHS 147
Query: 130 QADPPIIHRDIKSSNILLIDDN----HAKLADFGLC-KLGPFNDPNRPKRQTSIKGSFGY 184
+ I H D+K NI+L+D N KL DFG+ K+ N+ +I G+ +
Sbjct: 148 KR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK------NIFGTPEF 198
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRN 234
V +N + ++D++S GV+ L++G S L E +E N
Sbjct: 199 VAPEIVNYEPLGLEADMWSIGVITYILLSG-----ASPFLGETKQETLTN 243
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
+HP LVGL + ++EY+ L ++ Q L + + +I+ A
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-----FHMQRQRKLPEEHARFYSAEISLA 165
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTS-IKGSF 182
L YLH + II+RD+K N+LL + H KL D+G+CK G RP TS G+
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG-----LRPGDTTSTFCGTP 217
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L D ++ GVL+ E++ G
Sbjct: 218 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
+HP LVGL + ++EY+ L ++ Q L + + +I+ A
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-----FHMQRQRKLPEEHARFYSAEISLA 118
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTS-IKGSF 182
L YLH + II+RD+K N+LL + H KL D+G+CK G RP TS G+
Sbjct: 119 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG-----LRPGDTTSXFCGTP 170
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L D ++ GVL+ E++ G
Sbjct: 171 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 202
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 41/244 (16%)
Query: 5 EELKMATNDFRIRIGVGATSFVYLAE---LGDGNFGAVKRVMEE------RGGSRKIFLD 55
E+ + N+ + +GA +F + E G G AV +V + ++ +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 56 EVSVLLRV-SHPNLVGLLGFCLEKGEQLLLLEY---------LANKSLFDRMHTYYGQSL 105
E+ ++ + H N+V LLG C G L++ EY L KS + +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 106 GVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
LS + L + +A+ + +L S+ IHRD+ + N+LL + + AK+ DFGL +
Sbjct: 159 STLSTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR-DI 214
Query: 166 FNDPNR--------PKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLK 216
ND N P + + + F V T +SDV+S+G+LL E+ + GL
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESIFDCVYT---------VQSDVWSYGILLWEIFSLGLN 265
Query: 217 SIQG 220
G
Sbjct: 266 PYPG 269
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
+IG G VY A+ G A+K R+ +E G + E+S+L + H N+V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 75 CLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQAD 132
K +L+ E+L K L D G L S L + + Y H D
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCE-------GGLESVTAKSFLLQLLNGIAYCH---D 118
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNT 192
++HRD+K N+L+ + K+ADFGL + F P R + + D + +
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDV-LMGS 175
Query: 193 GFVSTKSDVYSFGVLLLELITGLKSIQG 220
ST D++S G + E++ G G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPG 203
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
+HP LVGL + ++EY+ L ++ Q L + + +I+ A
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-----FHMQRQRKLPEEHARFYSAEISLA 122
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTS-IKGSF 182
L YLH + II+RD+K N+LL + H KL D+G+CK G RP TS G+
Sbjct: 123 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG-----LRPGDTTSXFCGTP 174
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L D ++ GVL+ E++ G
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 35/239 (14%)
Query: 5 EELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVS 64
E+ ++A + ++ IG G+ V+ A+L + + A+K+V++++ + E+ ++ V
Sbjct: 36 EQREIAYTNCKV-IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR----ELQIMRIVK 90
Query: 65 HPNLVGLLGFCLEKGEQL------LLLEYLANKSL-FDRMHTYYGQSLGVLSWSNRLSIA 117
HPN+V L F G++ L+LEY+ R + Q++ +L +
Sbjct: 91 HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM--- 147
Query: 118 LDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPN------ 170
+ R+L Y+HS I HRDIK N+LL + KL DFG K+ +PN
Sbjct: 148 YQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICS 204
Query: 171 RPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
R R + FG TNY +T D++S G ++ EL+ G G + + + E
Sbjct: 205 RYYRAPEL--IFG--ATNY------TTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVE 253
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 32/225 (14%)
Query: 10 ATNDFRIRIGVGATSFVYLAE-LGDGNFGAVKR--------------VMEERGG----SR 50
A +F I V S+V + E +G G FG V R + +GG R
Sbjct: 5 AVREFAKEIDV---SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR 61
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSW 110
+ FL E S++ + HPN++ L G ++L E++ N +L + GQ +
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ----FTV 117
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPN 170
+ + IA + YL A+ +HRD+ + NIL+ + K++DFGL + N +
Sbjct: 118 IQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
Query: 171 RPKRQTSIKGSFGYVDTNYLNTGF--VSTKSDVYSFGVLLLELIT 213
P +S+ G T F ++ SD +S+G+++ E+++
Sbjct: 175 -PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
+IG G VY A+ G A+K R+ +E G + E+S+L + H N+V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 75 CLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQAD 132
K +L+ E+L K L D G L S L + + Y H D
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCE-------GGLESVTAKSFLLQLLNGIAYCH---D 118
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNT 192
++HRD+K N+L+ + K+ADFGL + F P R + + D + +
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDV-LMGS 175
Query: 193 GFVSTKSDVYSFGVLLLELITGLKSIQG 220
ST D++S G + E++ G G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGAPLFPG 203
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN Y+ + Y
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-----------VSYICSRY 187
Query: 190 LN--------TGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
T + S+ DV+S G +L EL+ G G + + + E
Sbjct: 188 YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 40/214 (18%)
Query: 30 ELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPNLV 69
ELG G+FG A+K V E +I FL+E SV+ + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQS-----LGVLSWSNRLSIALDIARAL 124
LLG + L+++E + L + + + L S S + +A +IA +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG- 183
YL++ +HRD+ + N + +D K+ DFG+ + D R KG G
Sbjct: 139 AYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR-------KGGKGL 188
Query: 184 ----YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
++ L G +T SDV+SFGV+L E+ T
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
+V LL + + L+ E+L ++ L D M +L + S + + L +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKDFMD---ASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
HS ++HRD+K N+L+ + KLADFGL + F P R + + +
Sbjct: 120 HSHR---VLHRDLKPENLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAPEI 174
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELIT 213
L + ST D++S G + E++T
Sbjct: 175 -LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ E++ N SL ++ Q+ G +
Sbjct: 52 RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL----DSFLRQNDGQFT 107
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL AD +HR + + NIL+ + K++DFGL + +D
Sbjct: 108 VIQLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLE-DDT 163
Query: 170 NRPKRQTSIKGSFG--YVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ P +++ G + + ++ SDV+S+G+++ E+++
Sbjct: 164 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
+IG G VY A+ G A+K R+ +E G + E+S+L + H N+V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 75 CLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQAD 132
K +L+ E+L K L D G L S L + + Y H D
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCE-------GGLESVTAKSFLLQLLNGIAYCH---D 118
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNT 192
++HRD+K N+L+ + K+ADFGL + F P R + + D + +
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPDV-LMGS 175
Query: 193 GFVSTKSDVYSFGVLLLELITGLKSIQG 220
ST D++S G + E++ G G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPG 203
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ EY+ N SL + + Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL +D +HRD+ + NIL+ + K++DFGL ++ +DP
Sbjct: 148 --QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE-DDP 201
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G++L E+++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 96
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 154
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN Y+ + Y
Sbjct: 155 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-----------VSYICSRY 200
Query: 190 LN--------TGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
T + S+ DV+S G +L EL+ G G + + + E
Sbjct: 201 YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 247
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN + I +
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN----VSXICSRYYRAPELI 194
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
++ DV+S G +L EL+ G G + + + E
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 84 SSGEKKDVVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN + I +
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN----VSXICSRYYRAPELI 194
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
++ DV+S G +L EL+ G G + + + E
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 84
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 85 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 142
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN + I +
Sbjct: 143 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN----VSXICSRYYRAPELI 195
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
++ DV+S G +L EL+ G G + + + E
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 235
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN + I +
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN----VSXICSRYYRAPELI 194
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
++ DV+S G +L EL+ G G + + + E
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 23 TSFVYLAE-LGDGNFGAVKR--------------VMEERGG----SRKIFLDEVSVLLRV 63
S+V + E +G G FG V R + +GG R+ FL E S++ +
Sbjct: 13 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
HPN++ L G ++L E++ N +L + GQ + + + IA
Sbjct: 73 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI----QLVGMLRGIASG 128
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG 183
+ YL A+ +HRD+ + NIL+ + K++DFGL + N + P +S+ G
Sbjct: 129 MRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PTYTSSLGGKIP 184
Query: 184 YVDTNYLNTGF--VSTKSDVYSFGVLLLELIT 213
T F ++ SD +S+G+++ E+++
Sbjct: 185 IRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 117
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN Y+ + Y
Sbjct: 176 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-----------VSYICSRY 221
Query: 190 LN--------TGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
T + S+ DV+S G +L EL+ G G + + + E
Sbjct: 222 YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 268
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 91
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 149
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN + I +
Sbjct: 150 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN----VSXICSRYYRAPELI 202
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
++ DV+S G +L EL+ G G + + + E
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 242
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K+ D G L ++ S + + L
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKTFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 120
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 175
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 176 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 102
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 160
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN + I +
Sbjct: 161 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN----VSXICSRYYRAPELI 213
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
++ DV+S G +L EL+ G G + + + E
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 253
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 30/212 (14%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRV 63
V +F + ++G+G +G V + + G +KI LD E+S+L +
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+HPN+V LL + + L+ E+L K D G L ++ S +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLL 117
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
+ L + HS ++HRD+K N+L+ + KLADFGL + F P R +
Sbjct: 118 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTLW 172
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ + L + ST D++S G + E++T
Sbjct: 173 YRAPEI-LLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 87
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 88 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 145
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN + I +
Sbjct: 146 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN----VSXICSRYYRAPELI 198
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
++ DV+S G +L EL+ G G + + + E
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 238
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 95
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN + I +
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN----VSXICSRYYRAPELI 206
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
++ DV+S G +L EL+ G G + + + E
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 246
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 111
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 169
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN Y+ + Y
Sbjct: 170 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-----------VSYICSRY 215
Query: 190 LN--------TGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
T + S+ DV+S G +L EL+ G G + + + E
Sbjct: 216 YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 262
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 63/229 (27%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGS---------------RKIFLDEVSVLLR-V 63
V A + ELG G +G V+++ G +K L ++ + +R V
Sbjct: 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV 107
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLAN------KSLFDRMHTYYGQSLGVLSWSNRLSIA 117
P V G +G+ + +E + K + D+ T LG IA
Sbjct: 108 DCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG--------KIA 159
Query: 118 LDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGL---------------CK 162
+ I +ALE+LHS+ +IHRD+K SN+L+ K+ DFG+ CK
Sbjct: 160 VSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCK 217
Query: 163 LGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLEL 211
P+ P R + + KG S KSD++S G+ ++EL
Sbjct: 218 --PYMAPERINPELNQKG--------------YSVKSDIWSLGITMIEL 250
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 119
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 177
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN Y+ + Y
Sbjct: 178 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-----------VSYICSRY 223
Query: 190 LN--------TGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
T + S+ DV+S G +L EL+ G G + + + E
Sbjct: 224 YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 270
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 95
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN + I +
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN----VSXICSRYYRAPELI 206
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
++ DV+S G +L EL+ G G + + + E
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 246
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++ + + E+ ++ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN Y+ + Y
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-----------VSYICSRY 187
Query: 190 LN--------TGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
T + S+ DV+S G +L EL+ G G + + + E
Sbjct: 188 YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 88
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 146
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN Y+ + Y
Sbjct: 147 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-----------VSYICSRY 192
Query: 190 LN--------TGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
T + S+ DV+S G +L EL+ G G + + + E
Sbjct: 193 YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 239
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 29/207 (14%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSR-KIFLDEVSVLLRVSHPNLVGLLGFC 75
+G GA VY A+ + + A +V++ + + ++ E+ +L HPN+V LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
+ +L+E+ A ++ M L+ S + AL YLH D I
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLH---DNKI 156
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFV 195
IHRD+K+ NIL D KLADFG+ K +I+ ++ T Y V
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA----------KNTRTIQRRDSFIGTPYWMAPEV 206
Query: 196 -----------STKSDVYSFGVLLLEL 211
K+DV+S G+ L+E+
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 63/229 (27%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGGS---------------RKIFLDEVSVLLR-V 63
V A + ELG G +G V+++ G +K L ++ + +R V
Sbjct: 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV 63
Query: 64 SHPNLVGLLGFCLEKGEQLLLLEYLAN------KSLFDRMHTYYGQSLGVLSWSNRLSIA 117
P V G +G+ + +E + K + D+ T LG IA
Sbjct: 64 DCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG--------KIA 115
Query: 118 LDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGL---------------CK 162
+ I +ALE+LHS+ +IHRD+K SN+L+ K+ DFG+ CK
Sbjct: 116 VSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCK 173
Query: 163 LGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLEL 211
P+ P R + + KG S KSD++S G+ ++EL
Sbjct: 174 --PYMAPERINPELNQKG--------------YSVKSDIWSLGITMIEL 206
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++ + + E+ ++ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN Y+ + Y
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-----------VSYICSRY 187
Query: 190 LN--------TGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
T + S+ DV+S G +L EL+ G G + + + E
Sbjct: 188 YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 28/207 (13%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 68 LVGLLGFCLEKGEQLLLLEYLA-NKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
+V LL + + L+ E+L+ + F G L ++ S + + L +
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAF 119
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
HS ++HRD+K N+L+ + KLADFGL + F P R + + +
Sbjct: 120 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAPE 174
Query: 187 TNYLNTGFVSTKSDVYSFGVLLLELIT 213
L + ST D++S G + E++T
Sbjct: 175 I-LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 121
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 179
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN Y+ + Y
Sbjct: 180 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-----------VSYICSRY 225
Query: 190 LN--------TGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
T + S+ DV+S G +L EL+ G G + + + E
Sbjct: 226 YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 272
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 28/207 (13%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 68 LVGLLGFCLEKGEQLLLLEYLA-NKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
+V LL + + L+ E+L+ + F G L ++ S + + L +
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-----SYLFQLLQGLAF 121
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
HS ++HRD+K N+L+ + KLADFGL + F P R + + +
Sbjct: 122 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAPE 176
Query: 187 TNYLNTGFVSTKSDVYSFGVLLLELIT 213
L + ST D++S G + E++T
Sbjct: 177 I-LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 162
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 220
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN Y+ + Y
Sbjct: 221 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN-----------VSYICSRY 266
Query: 190 LN--------TGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
T + S+ DV+S G +L EL+ G G + + + E
Sbjct: 267 YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 313
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 20 VGATSFVYLAELGDGNFGAV--KRVMEE---------------RGGSRKIFLDEVSVL-L 61
+G +F ++ LG G+FG V RV E + + + E +L L
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+HP L L C + ++L + N D M ++ Q + A +I
Sbjct: 80 ARNHPFLTQLFC-CFQTPDRLFFVMEFVNGG--DLM--FHIQKSRRFDEARARFYAAEII 134
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL +LH + II+RD+K N+LL + H KLADFG+CK G N + G+
Sbjct: 135 SALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT----TATFCGT 187
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
Y+ L D ++ GVLL E++ G
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLS 117
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTLWYRAP 172
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 173 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 117
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 172
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 173 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 116
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 171
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 172 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 120
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 175
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 176 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 117
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 172
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 173 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 119
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 174
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 175 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 118
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 119 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 173
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 174 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 121
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 122 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 176
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 177 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++++ + E+ ++ ++ H N+V L F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 117
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ R+ +Y ++ L + R+L Y+HS
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN + I +
Sbjct: 176 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN----VSXICSRYYRAPELI 228
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
++ DV+S G +L EL+ G G + + + E
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 268
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 118
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 173
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 174 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 118
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTLWYRAP 173
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 174 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
+V LL + + L+ E+L+ L D M +L + S + + L +
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLS-MDLKDFMD---ASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
HS ++HRD+K N+L+ + KLADFGL + F P R + + +
Sbjct: 122 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAPEI 176
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELIT 213
L + ST D++S G + E++T
Sbjct: 177 -LLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
+V LL + + L+ E+L+ L D M +L + S + + L +
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLS-MDLKDFMD---ASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
HS ++HRD+K N+L+ + KLADFGL + F P R + + +
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAPEI 177
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELIT 213
L + ST D++S G + E++T
Sbjct: 178 -LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 117
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTLWYRAP 172
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 173 EI-LLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 120
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 175
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 176 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 119
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 120 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 174
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 175 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 119
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 174
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 175 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 118
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 173
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 174 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 117
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 172
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 173 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G+ VY A+L D G A+K+V++ + + E+ ++ ++ H N+V L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 77 EKGEQL------LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
GE+ L+L+Y+ + R+ +Y ++ L + R+L Y+HS
Sbjct: 84 SSGEKKDEVYLNLVLDYVP--ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 131 ADPPIIHRDIKSSNILLIDDNHA-KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I HRDIK N+LL D KL DFG K +PN + I +
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN----VSXICSRYYRAPELI 194
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
++ DV+S G +L EL+ G G + + + E
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 116
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 171
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 172 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 124
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 125 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTLWYRAP 179
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 180 EI-LLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 116
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTLWYRAP 171
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 172 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 124
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 125 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTLWYRAP 179
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 180 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 117
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 172
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 173 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 117
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTLWYRAP 172
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 173 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 116
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTLWYRAP 171
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 172 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 18 IGVGATSFVYLAE--LGDGNFGAVKRVMEERG--GSRKIFLDEVSVLLRVS---HPNLVG 70
IG GA V+ A G F A+KRV + G G + EV+VL + HPN+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 71 LLGFCL----EKGEQLLLLEYLANKSLFDRMHTYYGQ--SLGVLSWSNRLSIALDIARAL 124
L C ++ +L L+ ++ L TY + GV + + + + + R L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDL----TTYLDKVPEPGVPTETIK-DMMFQLLRGL 133
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
++LHS ++HRD+K NIL+ KLADFGL ++ F TS+ + Y
Sbjct: 134 DFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-----MALTSVVVTLWY 185
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
L +T D++S G + E+ +GS+
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVL 108
R+ FL E + + HP++V L+G E +++ L L F ++ Y L
Sbjct: 60 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKY------SL 113
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
++ + A ++ AL YL S+ +HRDI + N+L+ ++ KL DFGL + + +
Sbjct: 114 DLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR---YME 167
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLE-LITGLKSIQG 220
+ + + K ++ +N ++ SDV+ FGV + E L+ G+K QG
Sbjct: 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 44/226 (19%)
Query: 20 VGATSFVYLAELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSV 59
V L ELG G+FG AVK V E +I FL+E SV
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLAN-------KSLFDRMHTYYGQSLGVLSWSN 112
+ + ++V LLG + L+++E +A+ +SL G+ L
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--E 131
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+ +A +IA + YL+++ +HRD+ + N ++ D K+ DFG+ + D R
Sbjct: 132 MIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR- 187
Query: 173 KRQTSIKGSFGYVDTNY-----LNTGFVSTKSDVYSFGVLLLELIT 213
KG G + + L G +T SD++SFGV+L E+ +
Sbjct: 188 ------KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 28 LAELGDGNFGAVKRVMEERGGSRKIFLDEVSV--------------------LLRVSHPN 67
+AE+G+G +G V + + + G R + L V V L HPN
Sbjct: 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 68 LVGLLGFCL----EKGEQLLLLEYLANKSLFDRMHTYYGQ--SLGVLSWSNRLSIALDIA 121
+V L C ++ +L L+ ++ L TY + GV + + + + +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDL----TTYLDKVPEPGVPTETIK-DMMFQLL 130
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
R L++LHS ++HRD+K NIL+ KLADFGL ++ F TS+ +
Sbjct: 131 RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-----MALTSVVVT 182
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
Y L +T D++S G + E+ +GS+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 28 LAELGDGNFGAVKRVMEERGGSRKIFLDEVSV--------------------LLRVSHPN 67
+AE+G+G +G V + + + G R + L V V L HPN
Sbjct: 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 68 LVGLLGFCL----EKGEQLLLLEYLANKSLFDRMHTYYGQ--SLGVLSWSNRLSIALDIA 121
+V L C ++ +L L+ ++ L TY + GV + + + + +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDL----TTYLDKVPEPGVPTETIK-DMMFQLL 130
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
R L++LHS ++HRD+K NIL+ KLADFGL ++ F TS+ +
Sbjct: 131 RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-----MALTSVVVT 182
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
Y L +T D++S G + E+ +GS+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 29/207 (14%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSR-KIFLDEVSVLLRVSHPNLVGLLGFC 75
+G GA VY A+ + + A +V++ + + ++ E+ +L HPN+V LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
+ +L+E+ A ++ M L+ S + AL YLH D I
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLH---DNKI 156
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFV 195
IHRD+K+ NIL D KLADFG+ K I+ ++ T Y V
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA----------KNTRXIQRRDSFIGTPYWMAPEV 206
Query: 196 -----------STKSDVYSFGVLLLEL 211
K+DV+S G+ L+E+
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ EY+ N SL + ++ G +
Sbjct: 59 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL----DAFLRKNDGRFT 114
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + I ++YL +D +HRD+ + NIL+ + K++DFG+ ++ +DP
Sbjct: 115 VIQLVGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDP 170
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G+++ E+++
Sbjct: 171 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVL 108
R+ FL E + + HP++V L+G E +++ L L F ++ Y L
Sbjct: 52 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKY------SL 105
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
++ + A ++ AL YL S+ +HRDI + N+L+ ++ KL DFGL + + +
Sbjct: 106 DLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR---YME 159
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLE-LITGLKSIQG 220
+ + + K ++ +N ++ SDV+ FGV + E L+ G+K QG
Sbjct: 160 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 212
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVL 108
R+ FL E + + HP++V L+G E +++ L L F ++ Y L
Sbjct: 57 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKY------SL 110
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
++ + A ++ AL YL S+ +HRDI + N+L+ ++ KL DFGL + + +
Sbjct: 111 DLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR---YME 164
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLE-LITGLKSIQG 220
+ + + K ++ +N ++ SDV+ FGV + E L+ G+K QG
Sbjct: 165 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 217
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 5 EELKMATNDFRIRIGVGATSFVYLAE---LGDGNFGAVKRVMEE------RGGSRKIFLD 55
E+ + N+ + +GA +F + E G G AV +V + ++ +
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 90
Query: 56 EVSVLLRV-SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLG-----VLS 109
E+ ++ + H N+V LLG C G L++ EY L + + L L
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 150
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ L + +A+ + +L S+ IHRD+ + N+LL + + AK+ DFGL + ND
Sbjct: 151 LRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDS 206
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
N + + + ++ + + +SDV+S+G+LL E+ + GL G
Sbjct: 207 NYIVKGNA-RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVL 108
R+ FL E + + HP++V L+G E +++ L L F ++ Y L
Sbjct: 83 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKY------SL 136
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
++ + A ++ AL YL S+ +HRDI + N+L+ ++ KL DFGL + + +
Sbjct: 137 DLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR---YME 190
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLE-LITGLKSIQG 220
+ + + K ++ +N ++ SDV+ FGV + E L+ G+K QG
Sbjct: 191 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 243
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVL 108
R+ FL E + + HP++V L+G E +++ L L F ++ Y L
Sbjct: 58 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKY------SL 111
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
++ + A ++ AL YL S+ +HRDI + N+L+ ++ KL DFGL + + +
Sbjct: 112 DLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR---YME 165
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLE-LITGLKSIQG 220
+ + + K ++ +N ++ SDV+ FGV + E L+ G+K QG
Sbjct: 166 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 218
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 44/226 (19%)
Query: 20 VGATSFVYLAELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSV 59
V L ELG G+FG AVK V E +I FL+E SV
Sbjct: 13 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 72
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLAN-------KSLFDRMHTYYGQSLGVLSWSN 112
+ + ++V LLG + L+++E +A+ +SL G+ L
Sbjct: 73 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--E 130
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+ +A +IA + YL+++ +HRD+ + N ++ D K+ DFG+ + D R
Sbjct: 131 MIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR- 186
Query: 173 KRQTSIKGSFGYVDTNY-----LNTGFVSTKSDVYSFGVLLLELIT 213
KG G + + L G +T SD++SFGV+L E+ +
Sbjct: 187 ------KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVL 108
R+ FL E + + HP++V L+G E +++ L L F ++ Y L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKY------SL 108
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
++ + A ++ AL YL S+ +HRDI + N+L+ ++ KL DFGL + + +
Sbjct: 109 DLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR---YME 162
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLE-LITGLKSIQG 220
+ + + K ++ +N ++ SDV+ FGV + E L+ G+K QG
Sbjct: 163 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ EY+ N SL + ++ G +
Sbjct: 53 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL----DAFLRKNDGRFT 108
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + I ++YL +D +HRD+ + NIL+ + K++DFG+ ++ +DP
Sbjct: 109 VIQLVGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDP 164
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G+++ E+++
Sbjct: 165 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ EY+ N SL + ++ G +
Sbjct: 74 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL----DAFLRKNDGRFT 129
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + I ++YL +D +HRD+ + NIL+ + K++DFG+ ++ +DP
Sbjct: 130 VIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDP 185
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G+++ E+++
Sbjct: 186 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 5 EELKMATNDFRIRIGVGATSFVYLAE---LGDGNFGAVKRVM------EERGGSRKIFLD 55
E+ + N+ + +GA +F + E G G AV +V ++ +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 56 EVSVLLRV-SHPNLVGLLGFCLEKGEQLLLLEY---------LANKSLFDRMHTYYGQSL 105
E+ ++ + H N+V LLG C G L++ EY L KS + +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 106 GVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
S + L + +A+ + +L S+ IHRD+ + N+LL + + AK+ DFGL +
Sbjct: 159 STASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR-DI 214
Query: 166 FNDPNR--------PKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLK 216
ND N P + + + F V T +SDV+S+G+LL E+ + GL
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESIFDCVYT---------VQSDVWSYGILLWEIFSLGLN 265
Query: 217 SIQG 220
G
Sbjct: 266 PYPG 269
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 9 MATNDFR--IRIGVGATSFVYLA-ELGDGNFGAVKRVMEERG--GSRKIFLDEVSVLLRV 63
MAT+ + IGVGA VY A + G+F A+K V G G + EV++L R+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 64 S---HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-LSWSNRLSIALD 119
HPN+V L+ C + L + + + TY ++ L +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFN---DPNRPKRQT 176
R L++LH+ I+HRD+K NIL+ KLADFGL ++ + DP
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDP------- 170
Query: 177 SIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELI 212
+ + Y L +T D++S G + E+
Sbjct: 171 -VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E++ K+ D G L ++ S + + L
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 116
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTLWYRAP 171
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 172 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVL 108
R+ FL E + + HP++V L+G E +++ L L F ++ Y L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKY------SL 108
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
++ + A ++ AL YL S+ +HRDI + N+L+ ++ KL DFGL + + +
Sbjct: 109 DLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR---YME 162
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLE-LITGLKSIQG 220
+ + + K ++ +N ++ SDV+ FGV + E L+ G+K QG
Sbjct: 163 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 5 EELKMATNDFRIRIGVGATSFVYLAE---LGDGNFGAVKRVMEE------RGGSRKIFLD 55
E+ + N+ + +GA +F + E G G AV +V + ++ +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 56 EVSVLLRV-SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLG-----VLS 109
E+ ++ + H N+V LLG C G L++ EY L + + L L
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 158
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ L + +A+ + +L S+ IHRD+ + N+LL + + AK+ DFGL + ND
Sbjct: 159 LRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDS 214
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
N + + + ++ + + +SDV+S+G+LL E+ + GL G
Sbjct: 215 NYIVKGNA-RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 62/228 (27%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS------IALDI 120
L LE+ + L+ +L G L + S +L+ + I
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLM------------GADLNNIVKSQKLTDDHVQFLIYQI 134
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKG 180
R L+Y+HS AD IIHRD+K SN+ + +D+ K+ DFGLC R T +
Sbjct: 135 LRGLKYIHS-AD--IIHRDLKPSNLAVNEDSELKILDFGLC------------RHTDDEM 179
Query: 181 SFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
+ GYV T + LN + D++S G ++ EL+TG G+
Sbjct: 180 T-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK 173
+S + +AR +E+L S+ IHRD+ + NILL ++N K+ DFGL + + +P+
Sbjct: 202 ISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLAR-DIYKNPDY-V 256
Query: 174 RQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
R+ + ++ + STKSDV+S+GVLL E+ +
Sbjct: 257 RKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 39 VKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL-----------EKGEQLLLLEY 87
V R ME + I D + + +S N+V + F L KG+ L L++
Sbjct: 208 VARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKW 267
Query: 88 LANKSLFDRMHTYYGQ--SLGVLSW 110
+A +S+FD++++ S GVL W
Sbjct: 268 MAPESIFDKIYSTKSDVWSYGVLLW 292
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 9 MATNDFR--IRIGVGATSFVYLA-ELGDGNFGAVKRVMEERG--GSRKIFLDEVSVLLRV 63
MAT+ + IGVGA VY A + G+F A+K V G G + EV++L R+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 64 S---HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-LSWSNRLSIALD 119
HPN+V L+ C + L + + + TY ++ L +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
R L++LH+ I+HRD+K NIL+ KLADFGL ++ + P +
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP-----VV 172
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELI 212
+ Y L +T D++S G + E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 29/207 (14%)
Query: 17 RIGVGATSFVYLAELGDGNFGAVKRVMEERGGSR-KIFLDEVSVLLRVSHPNLVGLLGFC 75
+G GA VY A+ + + A +V++ + + ++ E+ +L HPN+V LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
+ +L+E+ A ++ M L+ S + AL YLH D I
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLH---DNKI 156
Query: 136 IHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFV 195
IHRD+K+ NIL D KLADFG+ K I+ ++ T Y V
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA----------KNTRXIQRRDXFIGTPYWMAPEV 206
Query: 196 -----------STKSDVYSFGVLLLEL 211
K+DV+S G+ L+E+
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 31 LGDGNFGAVKRVMEERGG--------SRKIFLD---EVSVL-LRVSHPNLVGLLGFCLEK 78
LG+G+F ++ + ++ S+++ + E++ L L HPN+V L ++
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQ 78
Query: 79 GEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHR 138
L++E L LF+R+ S S+ I + A+ ++H D ++HR
Sbjct: 79 LHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVSAVSHMH---DVGVVHR 130
Query: 139 DIKSSNILLIDDN---HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFV 195
D+K N+L D+N K+ DFG +L P + N+P + + Y LN
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQPLKTPCF--TLHYAAPELLNQNGY 186
Query: 196 STKSDVYSFGVLLLELITGLKSIQG 220
D++S GV+L +++G Q
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ E + N SL + + Q +
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI-- 118
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL +D +HRD+ + NIL+ + K++DFGL ++ +DP
Sbjct: 119 --QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDP 172
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G++L E+++
Sbjct: 173 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 15/211 (7%)
Query: 13 DFRIRIGVGATSFVY-LAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGL 71
D +G GA V+ + E GN A K VM ++ E+ + + HP LV L
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 219
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+ E +++ E+++ LF+++ + + +S + + + L ++H
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVEYMRQVCKGLCHMHENN 275
Query: 132 DPPIIHRDIKSSNILLID--DNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
+H D+K NI+ N KL DFGL DP + + T+ G+ +
Sbjct: 276 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTA---HLDPKQSVKVTT--GTAEFAAPEV 327
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
V +D++S GVL L++GL G
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 358
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVL 108
R+ FL E + + HP++V L+G E +++ L L F ++ + L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKF------SL 108
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
++ + A ++ AL YL S+ +HRDI + N+L+ ++ KL DFGL + + +
Sbjct: 109 DLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR---YME 162
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLE-LITGLKSIQG 220
+ + + K ++ +N ++ SDV+ FGV + E L+ G+K QG
Sbjct: 163 DSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 48/220 (21%)
Query: 28 LAELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSVLLRVSHPN 67
L ELG G+FG AVK V E +I FL+E SV+ + +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN-------KSLFDRMHTYYGQSLGVLSWSNRLSIALDI 120
+V LLG + L+++E +A+ +SL G+ L + +A +I
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--EMIQMAAEI 139
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI-- 178
A + YL+++ +HRD+ + N ++ D K+ DFG+ R +T+
Sbjct: 140 ADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGM---------TRDIYETAYYR 187
Query: 179 KGSFGYVDTNY-----LNTGFVSTKSDVYSFGVLLLELIT 213
KG G + + L G +T SD++SFGV+L E+ +
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 100/247 (40%), Gaps = 39/247 (15%)
Query: 13 DFRIRIGVGATSFVYLAELGD-GNFGAVKRVMEE-RGGSRKIFLDEVSVLLRVSHPNLVG 70
+ + R+G G +V D G A+K+ +E +R+ + E+ ++ +++HPN+V
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 71 L------LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARAL 124
L LL +EY L ++ + G+ R ++ DI+ AL
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLS-DISSAL 134
Query: 125 EYLHSQADPPIIHRDIKSSNILL-----------IDDNHAKLADFG-LCKLGPFNDPNRP 172
YLH IIHRD+K NI+L ID +AK D G LC
Sbjct: 135 RYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC----------- 180
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECR 232
T G+ Y+ L + D +SFG L E ITG + + +W + R
Sbjct: 181 ---TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVR 237
Query: 233 RNKNVEV 239
N +
Sbjct: 238 EKSNEHI 244
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G KI LD E+S+L ++HPN
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 117
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTLWYRAP 172
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 173 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G KI LD E+S+L ++HPN
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E+L K D G L ++ S + + L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 116
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTLWYRAP 171
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 172 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 100/247 (40%), Gaps = 39/247 (15%)
Query: 13 DFRIRIGVGATSFVYLAELGD-GNFGAVKRVMEE-RGGSRKIFLDEVSVLLRVSHPNLVG 70
+ + R+G G +V D G A+K+ +E +R+ + E+ ++ +++HPN+V
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 71 L------LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARAL 124
L LL +EY L ++ + G+ R ++ DI+ AL
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLS-DISSAL 135
Query: 125 EYLHSQADPPIIHRDIKSSNILL-----------IDDNHAKLADFG-LCKLGPFNDPNRP 172
YLH IIHRD+K NI+L ID +AK D G LC
Sbjct: 136 RYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC----------- 181
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECR 232
T G+ Y+ L + D +SFG L E ITG + + +W + R
Sbjct: 182 ---TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVR 238
Query: 233 RNKNVEV 239
N +
Sbjct: 239 EKSNEHI 245
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 15/211 (7%)
Query: 13 DFRIRIGVGATSFVY-LAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGL 71
D +G GA V+ + E GN A K VM ++ E+ + + HP LV L
Sbjct: 54 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 113
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+ E +++ E+++ LF+++ + + +S + + + L ++H
Sbjct: 114 HDAFEDDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVEYMRQVCKGLCHMHENN 169
Query: 132 DPPIIHRDIKSSNILLID--DNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
+H D+K NI+ N KL DFGL DP + + T+ G+ +
Sbjct: 170 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTA---HLDPKQSVKVTT--GTAEFAAPEV 221
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
V +D++S GVL L++GL G
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 252
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 9 MATNDFR--IRIGVGATSFVYLA-ELGDGNFGAVKRVMEERG--GSRKIFLDEVSVLLRV 63
MAT+ + IGVGA VY A + G+F A+K V G G + EV++L R+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 64 S---HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-LSWSNRLSIALD 119
HPN+V L+ C + L + + + TY ++ L +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
R L++LH+ I+HRD+K NIL+ KLADFGL ++ + P +
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP-----VV 172
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELI 212
+ Y L +T D++S G + E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ E + N SL + + Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI-- 147
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL +D +HRD+ + NIL+ + K++DFGL ++ +DP
Sbjct: 148 --QLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDP 201
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G++L E+++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD------------EVSVLLRVSHPN 67
+F + ++G+G +G V + + G +KI LD E+S+L ++HPN
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 68 LVGLLGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
+V LL + + L+ E++ K D G L ++ S + + L
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQDLKKFMD-ASALTGIPLPLIK-----SYLFQLLQGLA 120
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
+ HS ++HRD+K N+L+ + KLADFGL + F P R + +
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYXHEVVTLWYRAP 175
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + ST D++S G + E++T
Sbjct: 176 EI-LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 8/164 (4%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
R+ FL E S++ + HPN++ L G + +++ E + N SL + + Q +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI-- 147
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
+ + IA ++YL +D +HRD+ + NIL+ + K++DFGL ++ +DP
Sbjct: 148 --QLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDP 201
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
K + + ++ SDV+S+G++L E+++
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 28 LAELGDGNFGAVK-------------RVMEE---RGGSRKIFLDEVSVLLRVSHPNLVGL 71
L +G GNF VK +++++ S + EV + ++HPN+V L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKL 78
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
+ L+ EY + +FD Y + G + I A++Y H +
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFD-----YLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN-YL 190
I+HRD+K+ N+LL D + K+ADFG F + + + G+ Y +
Sbjct: 134 ---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN-----KLDAFCGAPPYAAPELFQ 185
Query: 191 NTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNK 235
+ + DV+S GV+L L++G G L E E R K
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLRGK 229
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 35/242 (14%)
Query: 5 EELKMATNDFRIRIGVGATSFVYLAE---LGDGNFGAVKRVMEE------RGGSRKIFLD 55
E+ + N+ + +GA +F + E G G AV +V + ++ +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 56 EVSVLLRV-SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV------- 107
E+ ++ + H N+V LLG C G L++ EY L + + L
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN 158
Query: 108 ----LSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL 163
LS + L + +A+ + +L S+ IHRD+ + N+LL + + AK+ DFGL +
Sbjct: 159 PEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR- 214
Query: 164 GPFNDPNRPKRQTSIKGS----FGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSI 218
ND N +KG+ ++ + + +SDV+S+G+LL E+ + GL
Sbjct: 215 DIMNDSN-----YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
Query: 219 QG 220
G
Sbjct: 270 PG 271
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 28/202 (13%)
Query: 28 LAELGDGNFGAVKRVMEERGGS---RKI-----------FLDEVSVLLRVSHPNLVGLLG 73
+ ELGDG FG V + + G+ K+ ++ E+ +L HP +V LLG
Sbjct: 16 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
G+ +++E+ ++ D + + L + + + AL +LHS+
Sbjct: 76 AYYHDGKLWIMIEFCPGGAV-DAIMLELDRGL---TEPQIQVVCRQMLEALNFLHSKR-- 129
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
IIHRD+K+ N+L+ + +LADFG+ N KR + I + +
Sbjct: 130 -IIHRDLKAGNVLMTLEGDIRLADFGVSAK---NLKTLQKRDSFIGTPYWMAPEVVMCET 185
Query: 194 FVST----KSDVYSFGVLLLEL 211
T K+D++S G+ L+E+
Sbjct: 186 MKDTPYDYKADIWSLGITLIEM 207
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 19 GVGATSFVYLAELGDGNFGAVKRVMEERGG--------SRKIFLD---------EVSVLL 61
G ++ + LG+G+FG VK G ++K+ E+S L
Sbjct: 10 GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR 69
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HP+++ L K E ++++EY N+ LFD Y +S I
Sbjct: 70 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFD-----YIVQRDKMSEQEARRFFQQII 123
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
A+EY H I+HRD+K N+LL + + K+ADFGL + D N K GS
Sbjct: 124 SAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTSC---GS 175
Query: 182 FGYVDTNYLNTG-FVSTKSDVYSFGVLL 208
Y ++ + + DV+S GV+L
Sbjct: 176 PNYAAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ +++H N+V +G L+ + +LLE +A L F R L+
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 206
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 207 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 19 GVGATSFVYLAELGDGNFGAVKRVMEERGG--------SRKIFLD---------EVSVLL 61
G ++ + LG+G+FG VK G ++K+ E+S L
Sbjct: 9 GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR 68
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HP+++ L K E ++++EY N+ LFD Y +S I
Sbjct: 69 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFD-----YIVQRDKMSEQEARRFFQQII 122
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
A+EY H I+HRD+K N+LL + + K+ADFGL + D N K GS
Sbjct: 123 SAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTSC---GS 174
Query: 182 FGYVDTNYLNTG-FVSTKSDVYSFGVLL 208
Y ++ + + DV+S GV+L
Sbjct: 175 PNYAAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 15/209 (7%)
Query: 17 RIGVGATSFVYL--AELGDGNFGAVKRV-MEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
++G G + VY ++L D N A+K + +E G+ + EVS+L + H N+V L
Sbjct: 9 KLGEGTYATVYKGKSKLTD-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
+ L+ EYL + Y +++ N + R L Y H Q
Sbjct: 68 IIHTEKSLTLVFEYLDKD-----LKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK-- 120
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
++HRD+K N+L+ + KLADFGL + P + + + D +T
Sbjct: 121 -VLHRDLKPQNLLINERGELKLADFGLARAKSI--PTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 194 FVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+ ST+ D++ G + E+ TG GS
Sbjct: 178 Y-STQIDMWGVGCIFYEMATGRPLFPGST 205
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 18/201 (8%)
Query: 18 IGVGATSFVYLAELG-DGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
+G GA S V+L + G A+K + + +E++VL ++ H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
L+++ ++ LFDR+ GV + + + + A++YLH I+
Sbjct: 77 STTHYYLVMQLVSGGELFDRI-----LERGVYTEKDASLVIQQVLSAVKYLHENG---IV 128
Query: 137 HRDIKSSNILLI---DDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
HRD+K N+L + +++ + DFGL K+ + ++ G+ GYV L
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKM------EQNGIMSTACGTPGYVAPEVLAQK 182
Query: 194 FVSTKSDVYSFGVLLLELITG 214
S D +S GV+ L+ G
Sbjct: 183 PYSKAVDCWSIGVITYILLCG 203
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ +++H N+V +G L+ + +LLE +A L F R L+
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 141 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 192
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 193 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 28/202 (13%)
Query: 28 LAELGDGNFGAVKRVMEERGGS---RKI-----------FLDEVSVLLRVSHPNLVGLLG 73
+ ELGDG FG V + + G+ K+ ++ E+ +L HP +V LLG
Sbjct: 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
G+ +++E+ ++ D + + L + + + AL +LHS+
Sbjct: 84 AYYHDGKLWIMIEFCPGGAV-DAIMLELDRGL---TEPQIQVVCRQMLEALNFLHSKR-- 137
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
IIHRD+K+ N+L+ + +LADFG+ N KR + I + +
Sbjct: 138 -IIHRDLKAGNVLMTLEGDIRLADFGVSAK---NLKTLQKRDSFIGTPYWMAPEVVMCET 193
Query: 194 FVST----KSDVYSFGVLLLEL 211
T K+D++S G+ L+E+
Sbjct: 194 MKDTPYDYKADIWSLGITLIEM 215
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 19 GVGATSFVYLAELGDGNFGAVKRVMEERGG--------SRKIFLD---------EVSVLL 61
G ++ + LG+G+FG VK G ++K+ E+S L
Sbjct: 4 GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR 63
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HP+++ L K E ++++EY N+ LFD Y +S I
Sbjct: 64 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFD-----YIVQRDKMSEQEARRFFQQII 117
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
A+EY H I+HRD+K N+LL + + K+ADFGL + D N K GS
Sbjct: 118 SAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTSC---GS 169
Query: 182 FGYVDTNYLNTG-FVSTKSDVYSFGVLL 208
Y ++ + + DV+S GV+L
Sbjct: 170 PNYAAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 9 MATNDFR--IRIGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLD-----EVSVL 60
MAT+ + IGVGA VY A + G+F A+K V GG L EV++L
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 61 LRVS---HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV-LSWSNRLSI 116
R+ HPN+V L+ C + L + + + TY ++ L +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 125
Query: 117 ALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT 176
R L++LH+ I+HRD+K NIL+ KLADFGL ++ + T
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ-----MALT 177
Query: 177 SIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELI 212
+ + Y L +T D++S G + E+
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 34/245 (13%)
Query: 5 EELKMATNDFRIRIGVGATSFVYLAE---LGDGNFGAVKRVMEE------RGGSRKIFLD 55
E+ + N+ + +GA +F + E G G AV +V + ++ +
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 83
Query: 56 EVSVLLRV-SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFD----RMHTYYGQSLGV--- 107
E+ ++ + H N+V LLG C G L++ EY L + + G SL
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 108 -----------LSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLA 156
L + L + +A+ + +L S+ IHRD+ + N+LL + + AK+
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIG 200
Query: 157 DFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GL 215
DFGL + ND N + + + ++ + + +SDV+S+G+LL E+ + GL
Sbjct: 201 DFGLAR-DIMNDSNYIVKGNA-RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 258
Query: 216 KSIQG 220
G
Sbjct: 259 NPYPG 263
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 51/238 (21%)
Query: 28 LAELGDGNFGAVKRVMEERGGS----RKIF------------LDEVSVLLRVS-HPNLVG 70
+ +LG G +G V + ++ R G +KIF E+ +L +S H N+V
Sbjct: 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVN 73
Query: 71 LLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSL--GVLSWSNRLSIALDIARALEYLH 128
LL ++ + L +FD M T + +L ++ + + + ++YLH
Sbjct: 74 LLNVLRADNDRDVYL-------VFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 129 SQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI---KGSFGYV 185
S ++HRD+K SNILL + H K+ADFGL + F + R + + + +
Sbjct: 127 SGG---LLHRDMKPSNILLNAECHVKVADFGLSR--SFVNIRRVTNNIPLSINENTENFD 181
Query: 186 DTNYLNTGFVSTK-----------------SDVYSFGVLLLELITGLKSIQGSATLAE 226
D + T +V+T+ D++S G +L E++ G GS+T+ +
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ + +H N+V +G L+ + +LLE +A L F R L+
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 132 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 183
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 184 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 27/202 (13%)
Query: 31 LGDGNFGAV-KRVMEERGGSRKI------------------FLDEVSVLLRVSHPNLVGL 71
+G G FG V K +++ G +++ FL E ++ + SH N++ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
G + +++ EY+ N +L + + G S + + IA ++YL A
Sbjct: 112 EGVISKYKPMMIITEYMENGAL----DKFLREKDGEFSVLQLVGMLRGIAAGMKYL---A 164
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
+ +HRD+ + NIL+ + K++DFGL ++ +DP + K + ++
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE-DDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 192 TGFVSTKSDVYSFGVLLLELIT 213
++ SDV+SFG+++ E++T
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMT 245
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 34/211 (16%)
Query: 31 LGDGNFGAV-------------KRVMEERGGSRKI----FLDEVSVLLRVSHPNLVGLLG 73
LG G+FG V +V+ +R +K L EV +L ++ HPN++ L
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
F +KG L+ E LFD + S S + I + + Y+H
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMHKNK-- 152
Query: 134 PIIHRDIKSSNILL---IDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL 190
I+HRD+K N+LL D + ++ DFGL F + K + G+ Y+ L
Sbjct: 153 -IVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKMKDKI---GTAYYIAPEVL 206
Query: 191 NTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
+ G K DV+S GV+L L++G G+
Sbjct: 207 H-GTYDEKCDVWSTGVILYILLSGCPPFNGA 236
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 44/226 (19%)
Query: 20 VGATSFVYLAELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSV 59
V L ELG G+FG AVK V E +I FL+E SV
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLAN-------KSLFDRMHTYYGQSLGVLSWSN 112
+ + ++V LLG + L+++E +A+ +SL G+ L
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--E 131
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+ +A +IA + YL+++ +HR++ + N ++ D K+ DFG+ + D R
Sbjct: 132 MIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR- 187
Query: 173 KRQTSIKGSFGYVDTNY-----LNTGFVSTKSDVYSFGVLLLELIT 213
KG G + + L G +T SD++SFGV+L E+ +
Sbjct: 188 ------KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 29/212 (13%)
Query: 13 DFRIRIG-VGATSFVYLAELGDGNFGAVKRVMEERGGSR-KIFLDEVSVLLRVSHPNLVG 70
DF IG +G VY A+ + + A +V++ + + ++ E+ +L HPN+V
Sbjct: 12 DFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 71 LLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
LL + +L+E+ A ++ M L+ S + AL YLH
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLH-- 125
Query: 131 ADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL 190
D IIHRD+K+ NIL D KLADFG+ + +T I+ ++ T Y
Sbjct: 126 -DNKIIHRDLKAGNILFTLDGDIKLADFGV---------SAKNTRTXIQRRDSFIGTPYW 175
Query: 191 NTGFV-----------STKSDVYSFGVLLLEL 211
V K+DV+S G+ L+E+
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 44/226 (19%)
Query: 20 VGATSFVYLAELGDGNFG-------------------AVKRVMEERGGSRKI-FLDEVSV 59
V L ELG G+FG AVK V E +I FL+E SV
Sbjct: 15 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 74
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLAN-------KSLFDRMHTYYGQSLGVLSWSN 112
+ + ++V LLG + L+++E +A+ +SL G+ L
Sbjct: 75 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ--E 132
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRP 172
+ +A +IA + YL+++ +HR++ + N ++ D K+ DFG+ + D R
Sbjct: 133 MIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR- 188
Query: 173 KRQTSIKGSFGYVDTNY-----LNTGFVSTKSDVYSFGVLLLELIT 213
KG G + + L G +T SD++SFGV+L E+ +
Sbjct: 189 ------KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ + +H N+V +G L+ + +LLE +A L F R L+
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 140 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 191
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 192 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 32/196 (16%)
Query: 31 LGDGNFGAVKRVMEERGG--------SRKIFLD---------EVSVLLRVSHPNLVGLLG 73
LG+G+FG VK G ++K+ E+S L + HP+++ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
K E ++++EY N+ LFD Y +S I A+EY H
Sbjct: 72 VIKSKDEIIMVIEYAGNE-LFD-----YIVQRDKMSEQEARRFFQQIISAVEYCHRHK-- 123
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
I+HRD+K N+LL + + K+ADFGL + D N K GS Y ++
Sbjct: 124 -IVHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTSC---GSPNYAAPEVISGK 177
Query: 194 -FVSTKSDVYSFGVLL 208
+ + DV+S GV+L
Sbjct: 178 LYAGPEVDVWSCGVIL 193
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ + +H N+V +G L+ + +LLE +A L F R L+
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 141 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 192
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 193 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 21/130 (16%)
Query: 107 VLSWSNRLSIALDIARALEYLHSQA--------DPPIIHRDIKSSNILLIDDNHAKLADF 158
+++W+ +A ++R L YLH P I HRD KS N+LL D A LADF
Sbjct: 108 IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADF 167
Query: 159 GLC-KLGPFNDPNRPKRQTSIKGSFGYVDT-------NYLNTGFVSTKSDVYSFGVLLLE 210
GL + P P Q G+ Y+ N+ F+ + D+Y+ G++L E
Sbjct: 168 GLAVRFEPGKPPGDTHGQV---GTRRYMAPEVLEGAINFQRDAFL--RIDMYAMGLVLWE 222
Query: 211 LITGLKSIQG 220
L++ K+ G
Sbjct: 223 LVSRCKAADG 232
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ + +H N+V +G L+ + +LLE +A L F R L+
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 157 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 208
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 209 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 31/209 (14%)
Query: 31 LGDGNFGAVK--RVMEERGGSRKI-----------------FLDEVSVLLRVSHPNLVGL 71
LG G FG+V+ ++ +E G K+ FL E + + HP++ L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 72 LGFCLE---KGE---QLLLLEYLANKSLFD-RMHTYYGQSLGVLSWSNRLSIALDIARAL 124
+G L KG +++L ++ + L + + G++ L + +DIA +
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
EYL S+ IHRD+ + N +L +D +ADFGL + D R + + K +
Sbjct: 151 EYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR--QGCASKLPVKW 205
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ L + SDV++FGV + E++T
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ + +H N+V +G L+ + +LLE +A L F R L+
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 141 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ----- 192
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 193 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ + +H N+V +G L+ + +LLE +A L F R L+
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 146
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 147 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 198
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 199 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ + +H N+V +G L+ + +LLE +A L F R L+
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 206
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 207 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVL 108
R+ FL E + + HP++V L+G E +++ L L F ++ + L
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKF------SL 488
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
++ + A ++ AL YL S+ +HRDI + N+L+ ++ KL DFGL + + +
Sbjct: 489 DLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR---YME 542
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLE-LITGLKSIQG 220
+ + + K ++ +N ++ SDV+ FGV + E L+ G+K QG
Sbjct: 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ + +H N+V +G L+ + +L+E +A L F R L+
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 140 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 191
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 192 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ + +H N+V +G L+ + +LLE +A L F R L+
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 166
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 167 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 218
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 219 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 34/211 (16%)
Query: 31 LGDGNFGAV-------------KRVMEERGGSRKI----FLDEVSVLLRVSHPNLVGLLG 73
LG G+FG V +V+ +R +K L EV +L ++ HPN++ L
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
F +KG L+ E LFD + S S + I + + Y+H
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMHKN--- 145
Query: 134 PIIHRDIKSSNILL---IDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL 190
I+HRD+K N+LL D + ++ DFGL F + K + G+ Y+ L
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKMKDKI---GTAYYIAPEVL 200
Query: 191 NTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
+ G K DV+S GV+L L++G G+
Sbjct: 201 H-GTYDEKCDVWSTGVILYILLSGCPPFNGA 230
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ + +H N+V +G L+ + +LLE +A L F R L+
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 158 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 209
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 210 --DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ + +H N+V +G L+ + +L+E +A L F R L+
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 155 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 206
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 207 --DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 12/167 (7%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+++ + +P++VG GF + ++LE +SL + + + V R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE----LHKRRKAVTEPEARYF 147
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQ 175
+ I + ++YLH+ +IHRD+K N+ L DD K+ DFGL F+ +R+
Sbjct: 148 MRQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG----ERK 199
Query: 176 TSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
++ G+ Y+ L S + D++S G +L L+ G + S
Sbjct: 200 KTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
I + ++Y+HS+ +IHRD+K SNI L+D K+ DFGL ND R T K
Sbjct: 145 ITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKR----TRSK 196
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELI 212
G+ Y+ +++ + D+Y+ G++L EL+
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 31 LGDGNFGAV------------------KRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLL 72
LG G+FG V KR ++++ ++ L EV +L ++ HPN++ L
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT-DKESLLREVQLLKQLDHPNIMKLY 115
Query: 73 GFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQAD 132
F +KG L+ E LFD + S S + I + + Y+H
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMHKN-- 168
Query: 133 PPIIHRDIKSSNILL---IDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I+HRD+K N+LL D + ++ DFGL F + K + G+ Y+
Sbjct: 169 -KIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKMKDKI---GTAYYIAPEV 222
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
L+ G K DV+S GV+L L++G G+
Sbjct: 223 LH-GTYDEKCDVWSTGVILYILLSGCPPFNGA 253
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVL 108
R+ FL E + + HP++V L+G E +++ L L F ++ + L
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKF------SL 108
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
++ + A ++ AL YL S+ +HRDI + N+L+ + KL DFGL + + +
Sbjct: 109 DLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSR---YME 162
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLE-LITGLKSIQG 220
+ + + K ++ +N ++ SDV+ FGV + E L+ G+K QG
Sbjct: 163 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 31 LGDGNFGAV------------------KRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLL 72
LG G+FG V KR ++++ ++ L EV +L ++ HPN++ L
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT-DKESLLREVQLLKQLDHPNIMKLY 116
Query: 73 GFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQAD 132
F +KG L+ E LFD + S S + I + + Y+H
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMHKN-- 169
Query: 133 PPIIHRDIKSSNILL---IDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I+HRD+K N+LL D + ++ DFGL F + K + G+ Y+
Sbjct: 170 -KIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKMKDKI---GTAYYIAPEV 223
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
L+ G K DV+S GV+L L++G G+
Sbjct: 224 LH-GTYDEKCDVWSTGVILYILLSGCPPFNGA 254
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 22 ATSFVYLAELGDGNFGAVKRVMEERGG----------------SRKIFLDEVSVLLRVSH 65
A + L +G G++G +++ + G +++ + EV++L + H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 66 PNLVGLLGFCLEKGEQLL--LLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
PN+V +++ L ++EY L + T + L L + + A
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 124 LEYLHSQAD--PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
L+ H ++D ++HRD+K +N+ L + KL DFGL ++ +D + K + G+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFAK---TFVGT 179
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLEL 211
Y+ +N + KSD++S G LL EL
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 20/171 (11%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL--FDRMHTYYGQSLGVLSW 110
FL E ++ + +H N+V +G L+ + +LLE +A L F R L+
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---AKLADFGLCKLGPFN 167
+ L +A DIA +YL IHRDI + N LL AK+ DFG+ +
Sbjct: 181 LDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 232
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELIT 213
+ + KG + ++ G ++K+D +SFGVLL E+ +
Sbjct: 233 --DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 13 DFRI--RIGVGATSFVYLAE-LGDGNFGAVKRVMEE---RGGSRKIFLDEVSVLLRVSHP 66
DF++ +G G+ + VY AE + G A+K + ++ + G + +EV + ++ HP
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
+++ L + + L+LE N M+ Y + S + I + Y
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHN----GEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
LHS I+HRD+ SN+LL + + K+ADFGL P+ ++ ++ G+ Y+
Sbjct: 128 LHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLAT--QLKMPH--EKHYTLCGTPNYIS 180
Query: 187 TNYLNTGFVSTKSDVYSFGVLLLELITG 214
+SDV+S G + L+ G
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIG 208
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFG----AVKRVMEERGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G A V + R +KI L E+ +LLR H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + L+ +L L+ + T + LS + I R L+
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH------LSNDHICYFLYQILRGLK 158
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ + YV
Sbjct: 159 YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA---DPDHDHTGFLTE----YV 208
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 256
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 22 ATSFVYLAELGDGNFGAVKRVMEERGG----------------SRKIFLDEVSVLLRVSH 65
A + L +G G++G +++ + G +++ + EV++L + H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 66 PNLVGLLGFCLEKGEQLL--LLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
PN+V +++ L ++EY L + T + L L + + A
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 124 LEYLHSQAD--PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
L+ H ++D ++HRD+K +N+ L + KL DFGL ++ +D + K G+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDEDFAK---EFVGT 179
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLEL 211
Y+ +N + KSD++S G LL EL
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 22 ATSFVYLAELGDGNFGAVKRVMEERGGS----------------RKIFLDEVSVLLRVSH 65
A + L +G G++G +++ + G +++ + EV++L + H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 66 PNLVGLLGFCLEKGEQLL--LLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
PN+V +++ L ++EY L + T + L L + + A
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 124 LEYLHSQAD--PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
L+ H ++D ++HRD+K +N+ L + KL DFGL ++ +D + K + G+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFAK---AFVGT 179
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLEL 211
Y+ +N + KSD++S G LL EL
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 23/180 (12%)
Query: 49 SRKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVL 108
S L+EV+VL + HPN++ L F +K L++E LFD + + +
Sbjct: 79 SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI-------IHRM 131
Query: 109 SWSNRLSIALDIARALE---YLHSQADPPIIHRDIKSSNILLID---DNHAKLADFGLCK 162
+ N + A+ I + L YLH I+HRD+K N+LL D K+ DFGL
Sbjct: 132 KF-NEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSA 187
Query: 163 LGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+ F + + K + G+ Y+ L + K DV+S GV+L L+ G G
Sbjct: 188 V--FENQKKMKERL---GTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAGYPPFGGQT 241
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 39/231 (16%)
Query: 20 VGATSFVYLAELGDGNFGAV------------------KRVMEERGGSRKIFLDEVSVLL 61
V F L +G G+FG V K+ ER R +F E+ ++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF-KELQIMQ 70
Query: 62 RVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIA 121
+ HP LV L ++ + ++++ L L R H Q++ + +L I ++
Sbjct: 71 GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDL--RYHL--QQNVHFKEETVKLFIC-ELV 125
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
AL+YL +Q IIHRD+K NILL + H + DF + + P R + T++ G+
Sbjct: 126 MALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLP-----RETQITTMAGT 177
Query: 182 FGYVDTNYLNT----GFVSTKSDVYSFGVLLLELITGLKS--IQGSATLAE 226
Y+ ++ G+ S D +S GV EL+ G + I+ S + E
Sbjct: 178 KPYMAPEMFSSRKGAGY-SFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE 227
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+++ + +P++VG GF + ++LE +SL + + + V R
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE----LHKRRKAVTEPEARYF 131
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQ 175
+ I + ++YLH+ +IHRD+K N+ L DD K+ DFGL F+ +R+
Sbjct: 132 MRQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG----ERK 183
Query: 176 TSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+ G+ Y+ L S + D++S G +L L+ G + S
Sbjct: 184 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 230
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 39/216 (18%)
Query: 31 LGDGNFGAVKRVMEERGGSRKIFL------------------DEVSVLLRVSHPNLVGLL 72
LG+G++G VK V++ R+ E+ +L R+ H N++ L+
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 73 G--FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ 130
+ EK + +++EY + + + + + V +D LEYLHSQ
Sbjct: 73 DVLYNEEKQKMYMVMEYCVC-GMQEMLDSVPEKRFPVCQAHGYFCQLID---GLEYLHSQ 128
Query: 131 ADPPIIHRDIKSSNILLIDDNHAKLADFGLCK-LGPF--NDPNRPKRQTSIKGSFGYVD- 186
I+H+DIK N+LL K++ G+ + L PF +D R + +GS +
Sbjct: 129 G---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR-----TSQGSPAFQPP 180
Query: 187 --TNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
N L+T F K D++S GV L + TGL +G
Sbjct: 181 EIANGLDT-FSGFKVDIWSAGVTLYNITTGLYPFEG 215
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 52 IFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLL--LLEYLANKSLFDRMHTYYGQSLGVLS 109
F +E ++ + P +V L FC + ++ L ++EY+ L + M Y
Sbjct: 121 FFWEERDIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE----K 174
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
W+ + ++ AL+ +HS +IHRD+K N+LL H KLADFG C ++
Sbjct: 175 WAKFYTA--EVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCM--KMDET 227
Query: 170 NRPKRQTSIKGSFGYVDTNYLNT----GFVSTKSDVYSFGVLLLELITG 214
T++ G+ Y+ L + G+ + D +S GV L E++ G
Sbjct: 228 GMVHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 32 GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVS-HPNLVGLLGFCLEKGEQLLLLEYLAN 90
G G+F A EE R+ L EV +L +VS HPN++ L L+ + +
Sbjct: 54 GGGSFSA-----EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK 108
Query: 91 KSLFDRMHTYYGQSLGVLSWSNR--LSIALDIARALEYLHSQADPPIIHRDIKSSNILLI 148
LFD Y + + + R + L++ AL L+ I+HRD+K NILL
Sbjct: 109 GELFD----YLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILLD 158
Query: 149 DDNHAKLADFGL-CKLGPFNDPNRPKRQTSIKGSFGYVDTNYL------NTGFVSTKSDV 201
DD + KL DFG C+L DP R S+ G+ Y+ + N + D+
Sbjct: 159 DDMNIKLTDFGFSCQL----DPGEKLR--SVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 202 YSFGVLLLELITG 214
+S GV++ L+ G
Sbjct: 213 WSTGVIMYTLLAG 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 88/215 (40%), Gaps = 52/215 (24%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGGS----RKI-------------FLDEVSVLLRVSHPN 67
F L E+G G+FGAV + R +K+ + EV L ++ HPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 68 LVGLLGFCLEKGEQLLLLEY-LANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
+ G L + L++EY L + S +H Q + + + + + L Y
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA------VTHGALQGLAY 169
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCK-LGPFNDPNRPKRQTSIKGSFGYV 185
LHS +IHRD+K+ NILL + KL DFG + P N +V
Sbjct: 170 LHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN---------------XFV 211
Query: 186 DTNY---------LNTGFVSTKSDVYSFGVLLLEL 211
T Y ++ G K DV+S G+ +EL
Sbjct: 212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+++ + +P++VG GF + ++LE +SL + + + V R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE----LHKRRKAVTEPEARYF 147
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQ 175
+ I + ++YLH+ +IHRD+K N+ L DD K+ DFGL F+ +R+
Sbjct: 148 MRQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG----ERK 199
Query: 176 TSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+ G+ Y+ L S + D++S G +L L+ G + S
Sbjct: 200 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+++ + +P++VG GF + ++LE +SL + + + V R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE----LHKRRKAVTEPEARYF 147
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQ 175
+ I + ++YLH+ +IHRD+K N+ L DD K+ DFGL F+ +R+
Sbjct: 148 MRQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG----ERK 199
Query: 176 TSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+ G+ Y+ L S + D++S G +L L+ G + S
Sbjct: 200 KXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 36/228 (15%)
Query: 4 LEELKMATNDFRIR--IGVGA-----------TSFVYLAELGDGNFGAVKRVMEERGGSR 50
+ +L+M D+ + IG GA T VY +L F +KR
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKR------SDS 118
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSW 110
F +E ++ + P +V L + +++EY+ L + M Y W
Sbjct: 119 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE----KW 174
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPN 170
+ R A ++ AL+ +HS IHRD+K N+LL H KLADFG C N
Sbjct: 175 A-RFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM--KMNKEG 227
Query: 171 RPKRQTSIKGSFGYVDTNYLNT----GFVSTKSDVYSFGVLLLELITG 214
+ T++ G+ Y+ L + G+ + D +S GV L E++ G
Sbjct: 228 MVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 26/183 (14%)
Query: 40 KRVMEERGGSRKIFLDEVSVLLRVS-HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMH 98
+++ E R +R+ E +L +V+ HP+++ L+ L+ + + LFD
Sbjct: 137 EQLEEVREATRR----ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFD--- 189
Query: 99 TYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADF 158
Y LS SI + A+ +LH+ I+HRD+K NILL D+ +L+DF
Sbjct: 190 --YLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDF 244
Query: 159 GL-CKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKS------DVYSFGVLLLEL 211
G C L P ++ + G+ GY+ L T D+++ GV+L L
Sbjct: 245 GFSCHLEP------GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL 298
Query: 212 ITG 214
+ G
Sbjct: 299 LAG 301
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 51/212 (24%)
Query: 30 ELGDGNFGAVKRVMEERGG----------SRKIFLDEVSVLLRV-SHPNLVGLLGFCLEK 78
++G G++ KR + + S++ +E+ +LLR HPN++ L +
Sbjct: 29 DIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDG 88
Query: 79 GEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL--DIARALEYLHSQADPPII 136
++ E + L D++ L +S R + A+ I + +EYLH+Q ++
Sbjct: 89 KYVYVVTELMKGGELLDKI-------LRQKFFSEREASAVLFTITKTVEYLHAQG---VV 138
Query: 137 HRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNT 192
HRD+K SNIL +D++ ++ DFG K ++ G + T
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAK--------------QLRAENGLLMTPCYTA 184
Query: 193 GFVSTK----------SDVYSFGVLLLELITG 214
FV+ + D++S GVLL ++TG
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 36/228 (15%)
Query: 4 LEELKMATNDFRIR--IGVGA-----------TSFVYLAELGDGNFGAVKRVMEERGGSR 50
+ +L+M D+ + IG GA T VY +L F +KR
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKR------SDS 113
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSW 110
F +E ++ + P +V L + +++EY+ L + M Y W
Sbjct: 114 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE----KW 169
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPN 170
+ R A ++ AL+ +HS IHRD+K N+LL H KLADFG C N
Sbjct: 170 A-RFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM--KMNKEG 222
Query: 171 RPKRQTSIKGSFGYVDTNYLNT----GFVSTKSDVYSFGVLLLELITG 214
+ T++ G+ Y+ L + G+ + D +S GV L E++ G
Sbjct: 223 MVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 36/228 (15%)
Query: 4 LEELKMATNDFRIR--IGVGA-----------TSFVYLAELGDGNFGAVKRVMEERGGSR 50
+ +L+M D+ + IG GA T VY +L F +KR
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKR------SDS 118
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSW 110
F +E ++ + P +V L + +++EY+ L + M Y W
Sbjct: 119 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE----KW 174
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPN 170
+ R A ++ AL+ +HS IHRD+K N+LL H KLADFG C N
Sbjct: 175 A-RFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM--KMNKEG 227
Query: 171 RPKRQTSIKGSFGYVDTNYLNT----GFVSTKSDVYSFGVLLLELITG 214
+ T++ G+ Y+ L + G+ + D +S GV L E++ G
Sbjct: 228 MVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVL 108
R+ FL E + + HP++V L+G E +++ L L F ++ + L
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKF------SL 488
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
++ + A ++ AL YL S+ +HRDI + N+L+ + KL DFGL + + +
Sbjct: 489 DLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSR---YME 542
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLE-LITGLKSIQG 220
+ + + K ++ +N ++ SDV+ FGV + E L+ G+K QG
Sbjct: 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 108 LSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFN 167
L+ + + + +A+ +E+L S+ IHRD+ + NILL + N K+ DFGL + +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR-DIYK 243
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEW 227
DP+ R+ + ++ + + +SDV+SFGVLL E+ + S + E
Sbjct: 244 DPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 301
Query: 228 TEECRRNKN 236
E CRR K
Sbjct: 302 -EFCRRLKE 309
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
Query: 39 VKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL-----------EKGEQLLLLEY 87
V + ME + I D + + +S N+V + F L KG+ L L++
Sbjct: 200 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 259
Query: 88 LANKSLFDRMHTYYGQ--SLGVLSWS 111
+A +++FDR++T S GVL W
Sbjct: 260 MAPETIFDRVYTIQSDVWSFGVLLWE 285
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 32/208 (15%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGG--------SRKIFLD---------EVSVLLRVSHPN 67
++ LG+G+FG VK + SR++ E+S L + HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
++ L + ++++EY A LFD Y ++ I A+EY
Sbjct: 71 IIKLYDVITTPTDIVMVIEY-AGGELFD-----YIVEKKRMTEDEGRRFFQQIICAIEYC 124
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
H I+HRD+K N+LL D+ + K+ADFGL + D N K GS Y
Sbjct: 125 HRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNI--MTDGNFLKTSC---GSPNYAAP 176
Query: 188 NYLNTG-FVSTKSDVYSFGVLLLELITG 214
+N + + DV+S G++L ++ G
Sbjct: 177 EVINGKLYAGPEVDVWSCGIVLYVMLVG 204
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 88/215 (40%), Gaps = 52/215 (24%)
Query: 25 FVYLAELGDGNFGAVKRVMEERGGS----RKI-------------FLDEVSVLLRVSHPN 67
F L E+G G+FGAV + R +K+ + EV L ++ HPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 68 LVGLLGFCLEKGEQLLLLEY-LANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
+ G L + L++EY L + S +H Q + + + + + L Y
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA------VTHGALQGLAY 130
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCK-LGPFNDPNRPKRQTSIKGSFGYV 185
LHS +IHRD+K+ NILL + KL DFG + P N +V
Sbjct: 131 LHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN---------------XFV 172
Query: 186 DTNY---------LNTGFVSTKSDVYSFGVLLLEL 211
T Y ++ G K DV+S G+ +EL
Sbjct: 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 87 YLANKSLFDRMHTYYGQSL--GVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSN 144
++ KSL D + L L+ + + + +A+ +E+L S+ IHRD+ + N
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARN 228
Query: 145 ILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSF 204
ILL + N K+ DFGL + + DP+ R+ + ++ + + +SDV+SF
Sbjct: 229 ILLSEKNVVKICDFGLAR-DIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 286
Query: 205 GVLLLELITGLKSIQGSATLAEWTEECRRNKN 236
GVLL E+ + S + E E CRR K
Sbjct: 287 GVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 316
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
Query: 39 VKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL-----------EKGEQLLLLEY 87
V + ME + I D + + +S N+V + F L KG+ L L++
Sbjct: 207 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 266
Query: 88 LANKSLFDRMHTYYGQ--SLGVLSWS 111
+A +++FDR++T S GVL W
Sbjct: 267 MAPETIFDRVYTIQSDVWSFGVLLWE 292
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 32 GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVS-HPNLVGLLGFCLEKGEQLLLLEYLAN 90
G G+F A EE R+ L EV +L +VS HPN++ L L+ + +
Sbjct: 54 GGGSFSA-----EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK 108
Query: 91 KSLFDRMHTYYGQSLGVLSWSNR--LSIALDIARALEYLHSQADPPIIHRDIKSSNILLI 148
LFD Y + + + R + L++ AL L+ I+HRD+K NILL
Sbjct: 109 GELFD----YLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILLD 158
Query: 149 DDNHAKLADFGL-CKLGPFNDPNRPKRQTSIKGSFGYVDTNYL------NTGFVSTKSDV 201
DD + KL DFG C+L DP R+ + G+ Y+ + N + D+
Sbjct: 159 DDMNIKLTDFGFSCQL----DPGEKLRE--VCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 202 YSFGVLLLELITG 214
+S GV++ L+ G
Sbjct: 213 WSTGVIMYTLLAG 225
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 108 LSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFN 167
L+ + + + +A+ +E+L S+ IHRD+ + NILL + N K+ DFGL + +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR-DIYK 245
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEW 227
DP+ R+ + ++ + + +SDV+SFGVLL E+ + S + E
Sbjct: 246 DPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 303
Query: 228 TEECRRNKN 236
E CRR K
Sbjct: 304 -EFCRRLKE 311
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQ--SLGVLSWS 111
+ KG+ L L+++A +++FDR++T S GVL W
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 287
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 108 LSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFN 167
L+ + + + +A+ +E+L S+ IHRD+ + NILL + N K+ DFGL + +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR-DIYK 252
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEW 227
DP+ R+ + ++ + + +SDV+SFGVLL E+ + S + E
Sbjct: 253 DPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 310
Query: 228 TEECRRNKN 236
E CRR K
Sbjct: 311 -EFCRRLKE 318
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
Query: 39 VKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL-----------EKGEQLLLLEY 87
V + ME + I D + + +S N+V + F L KG+ L L++
Sbjct: 209 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 268
Query: 88 LANKSLFDRMHTYYGQ--SLGVLSWS 111
+A +++FDR++T S GVL W
Sbjct: 269 MAPETIFDRVYTIQSDVWSFGVLLWE 294
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 32 GDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVS-HPNLVGLLGFCLEKGEQLLLLEYLAN 90
G G+F A EE R+ L EV +L +VS HPN++ L L+ + +
Sbjct: 41 GGGSFSA-----EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK 95
Query: 91 KSLFDRMHTYYGQSLGVLSWSNR--LSIALDIARALEYLHSQADPPIIHRDIKSSNILLI 148
LFD Y + + + R + L++ AL L+ I+HRD+K NILL
Sbjct: 96 GELFD----YLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILLD 145
Query: 149 DDNHAKLADFGL-CKLGPFNDPNRPKRQTSIKGSFGYVDTNYL------NTGFVSTKSDV 201
DD + KL DFG C+L DP R+ + G+ Y+ + N + D+
Sbjct: 146 DDMNIKLTDFGFSCQL----DPGEKLRE--VCGTPSYLAPEIIECSMNDNHPGYGKEVDM 199
Query: 202 YSFGVLLLELITG 214
+S GV++ L+ G
Sbjct: 200 WSTGVIMYTLLAG 212
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 112/268 (41%), Gaps = 71/268 (26%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
LA +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 37 LAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 96
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 97 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 150
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 151 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 194
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITG------------------LKSIQGS 221
T + LN + D++S G ++ EL+TG L G+
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 254
Query: 222 ATLAEWTEECRRNKNVEVWAQMLDPKLN 249
L + + E RN ++ AQM PK+N
Sbjct: 255 ELLKKISSESARNY-IQSLAQM--PKMN 279
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFGAVKRVMEE----RGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G V + R RKI L E+ +LLR H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 142
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 143 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDH--DHTGFLTE--YV 192
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 31 LGDGNFGAV------------------KRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLL 72
LG G+FG V KR ++++ ++ L EV +L ++ HPN+ L
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT-DKESLLREVQLLKQLDHPNIXKLY 92
Query: 73 GFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQAD 132
F +KG L+ E LFD + S S + I + + Y H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYXHKN-- 145
Query: 133 PPIIHRDIKSSNILL---IDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
I+HRD+K N+LL D + ++ DFGL F + K + G+ Y+
Sbjct: 146 -KIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKXKDKI---GTAYYIAPEV 199
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
L+ G K DV+S GV+L L++G G+
Sbjct: 200 LH-GTYDEKCDVWSTGVILYILLSGCPPFNGA 230
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 71/268 (26%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCAKLTDDHVQFLIYQILRGLKY 136
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 137 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 180
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITG------------------LKSIQGS 221
T + LN + D++S G ++ EL+TG L G+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 222 ATLAEWTEECRRNKNVEVWAQMLDPKLN 249
L + + E RN ++ AQM PK+N
Sbjct: 241 ELLKKISSESARNY-IQSLAQM--PKMN 265
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 19/198 (9%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSN 112
LDEV+VL ++ HPN++ L F +K L++E LFD + S +
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVD 122
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLID---DNHAKLADFGLCKLGPFNDP 169
I + YLH I+HRD+K N+LL D K+ DFGL F
Sbjct: 123 AAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVG 177
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA--TLAEW 227
+ K + G+ Y+ L + K DV+S GV+L L+ G G + +
Sbjct: 178 GKMKERL---GTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKR 233
Query: 228 TEECRRNKNVEVWAQMLD 245
E+ + + + W Q+ D
Sbjct: 234 VEKGKFSFDPPDWTQVSD 251
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 7 LKMATNDFRIR--IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRK---IFLDEVSVL 60
+ + NDF + IG G VY D G A+K + ++R ++ + L+E +L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 61 LRVSHPN--LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
VS + + + + ++L + L N +H + Q GV S ++ A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG---DLHYHLSQH-GVFSEADMRFYAA 299
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+I LE++H++ +++RD+K +NILL + H +++D GL D ++ K S+
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKPHASV 351
Query: 179 KGSFGYVDTNYLNTGFV-STKSDVYSFGVLLLELITGLKSIQGSAT 223
G+ GY+ L G + +D +S G +L +L+ G + T
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFG----AVKRVMEERGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G A V + R +KI L E+ +LLR H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 138
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 139 YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA---DPDH--DHTGFLTE--YV 188
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 93/235 (39%), Gaps = 52/235 (22%)
Query: 3 ALEELKMATNDFR--IRIGVGATSFV-YLAELGDGNFGAVKRVMEE-RGGSRKIFLDEVS 58
A E ++ +D +G GA V + G AVKR+ +K L ++
Sbjct: 25 AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLD 84
Query: 59 VLLR-VSHPNLVGLLGFCLEKGEQLLLLEYLAN------KSLFDRMHTYYGQSLGVLSWS 111
+ R V P V G +G+ + E K + D+ T LG
Sbjct: 85 ISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILG----- 139
Query: 112 NRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGL----------- 160
IA+ I +ALE+LHS+ +IHRD+K SN+L+ K DFG+
Sbjct: 140 ---KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKD 194
Query: 161 ----CKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLEL 211
CK P+ P R + + KG S KSD++S G+ +EL
Sbjct: 195 IDAGCK--PYXAPERINPELNQKG--------------YSVKSDIWSLGITXIEL 233
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 7 LKMATNDFRIR--IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRK---IFLDEVSVL 60
+ + NDF + IG G VY D G A+K + ++R ++ + L+E +L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 61 LRVSHPN--LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
VS + + + + ++L + L N +H + Q GV S ++ A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG---DLHYHLSQH-GVFSEADMRFYAA 299
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+I LE++H++ +++RD+K +NILL + H +++D GL D ++ K S+
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKPHASV 351
Query: 179 KGSFGYVDTNYLNTGFV-STKSDVYSFGVLLLELITGLKSIQGSAT 223
G+ GY+ L G + +D +S G +L +L+ G + T
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 7 LKMATNDFRIR--IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRK---IFLDEVSVL 60
+ + NDF + IG G VY D G A+K + ++R ++ + L+E +L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 61 LRVSHPN--LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
VS + + + + ++L + L N +H + Q GV S ++ A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG---DLHYHLSQH-GVFSEADMRFYAA 299
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+I LE++H++ +++RD+K +NILL + H +++D GL D ++ K S+
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKPHASV 351
Query: 179 KGSFGYVDTNYLNTGFV-STKSDVYSFGVLLLELITGLKSIQGSAT 223
G+ GY+ L G + +D +S G +L +L+ G + T
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 7 LKMATNDFRIR--IGVGATSFVYLAELGD-GNFGAVKRVMEERGGSRK---IFLDEVSVL 60
+ + NDF + IG G VY D G A+K + ++R ++ + L+E +L
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 61 LRVSHPN--LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL 118
VS + + + + ++L + L N +H + Q GV S ++ A
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG---DLHYHLSQH-GVFSEADMRFYAA 298
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
+I LE++H++ +++RD+K +NILL + H +++D GL D ++ K S+
Sbjct: 299 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKPHASV 350
Query: 179 KGSFGYVDTNYLNTGFV-STKSDVYSFGVLLLELITGLKSIQGSAT 223
G+ GY+ L G + +D +S G +L +L+ G + T
Sbjct: 351 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFG----AVKRVMEERGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G A V + R +KI L E+ +LLR H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 138
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 139 YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA---DPDH--DHTGFLTE--YV 188
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFG--------------AVKRVME-ERGGSRKIFLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G A+K++ E + L E+ +LLR H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 142
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 143 YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA---DPDH--DHTGFLTE--YV 192
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFG----AVKRVMEERGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G A V + R +KI L E+ +LLR H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 138
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 139 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDH--DHTGFLTE--YV 188
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFG----AVKRVMEERGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G A V + R +KI L E+ +LLR H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 158
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ + YV
Sbjct: 159 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTE----YV 208
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 256
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFG----AVKRVMEERGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G A V + R +KI L E+ +LLR H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 140
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 141 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDH--DHTGFLTE--YV 190
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 238
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+S+ ++H ++VG GF + ++LE +SL + +H + L+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH----KRRKALTEPEARY 121
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQ 175
I +YLH +IHRD+K N+ L +D K+ DFGL ++ +R+
Sbjct: 122 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG----ERK 174
Query: 176 TSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
++ G+ Y+ L+ S + DV+S G ++ L+ G + S
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFG----AVKRVMEERGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G A V + R +KI L E+ +LLR H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 70 GLLGF----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 138
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 139 YIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVA---DPDH--DHTGFLTE--YV 188
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+S+ ++H ++VG GF + ++LE +SL + +H + L+
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH----KRRKALTEPEARY 125
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQ 175
I +YLH +IHRD+K N+ L +D K+ DFGL ++ +R+
Sbjct: 126 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG----ERK 178
Query: 176 TSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
++ G+ Y+ L+ S + DV+S G ++ L+ G + S
Sbjct: 179 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 71/268 (26%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 136
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 137 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 180
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITG------------------LKSIQGS 221
T + LN + D++S G ++ EL+TG L G+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 222 ATLAEWTEECRRNKNVEVWAQMLDPKLN 249
L + + E RN ++ AQM PK+N
Sbjct: 241 ELLKKISSESARNY-IQSLAQM--PKMN 265
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFG----AVKRVMEERGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G A V + R +KI L E+ +LLR H N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 70 GLLGF----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 146
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ + YV
Sbjct: 147 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTE----YV 196
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 244
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFG----AVKRVMEERGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G A V + R +KI L E+ +LLR H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 70 GLLGF----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 138
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ + YV
Sbjct: 139 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLTE----YV 188
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHP-NLVGLLGFC 75
+G G VY + G A+K VM+ G + E+++L + SH N+ G
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIK-VMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 76 LEKG-----EQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
++K +QL L++E+ S+ D + G +L W I +I R L +LH
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE-EWI--AYICREILRGLSHLHQ 147
Query: 130 QADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV---- 185
+IHRDIK N+LL ++ KL DFG+ D +R T I +
Sbjct: 148 HK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQ---LDRTVGRRNTFIGTPYWMAPEVI 201
Query: 186 --DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
D N T KSD++S G+ +E+ G
Sbjct: 202 ACDENPDAT--YDFKSDLWSLGITAIEMAEG 230
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+S+ ++H ++VG GF + ++LE +SL + +H + L+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH----KRRKALTEPEARY 121
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQ 175
I +YLH +IHRD+K N+ L +D K+ DFGL ++ +R+
Sbjct: 122 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG----ERK 174
Query: 176 TSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
++ G+ Y+ L+ S + DV+S G ++ L+ G + S
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSN 112
LDEV+VL ++ HPN++ L F +K L++E LFD + S +
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVD 105
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLID---DNHAKLADFGLCKLGPFNDP 169
I + YLH I+HRD+K N+LL D K+ DFGL F
Sbjct: 106 AAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVG 160
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+ K + G+ Y+ L + K DV+S GV+L L+ G G
Sbjct: 161 GKMKERL---GTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPPFGGQT 209
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 71/268 (26%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 46 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 105
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 159
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 160 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 203
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITG------------------LKSIQGS 221
T + LN + D++S G ++ EL+TG L G+
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 263
Query: 222 ATLAEWTEECRRNKNVEVWAQMLDPKLN 249
L + + E RN ++ AQM PK+N
Sbjct: 264 ELLKKISSESARNY-IQSLAQM--PKMN 288
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 71/268 (26%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 160
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 161 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 204
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITG------------------LKSIQGS 221
T + LN + D++S G ++ EL+TG L G+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 222 ATLAEWTEECRRNKNVEVWAQMLDPKLN 249
L + + E RN ++ AQM PK+N
Sbjct: 265 ELLKKISSESARNY-IQSLAQM--PKMN 289
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 51/235 (21%)
Query: 7 LKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGG----------SRKIFLDE 56
+ + T + + V + +V +G G++ KR + + S++ +E
Sbjct: 11 VDLGTENLYFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEE 70
Query: 57 VSVLLRV-SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
+ +LLR HPN++ L + L+ E + L D++ L +S R +
Sbjct: 71 IEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI-------LRQKFFSEREA 123
Query: 116 --IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHA----KLADFGLCKLGPFNDP 169
+ I + +EYLHSQ ++HRD+K SNIL +D++ ++ DFG K
Sbjct: 124 SFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK------- 173
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTGFVSTK----------SDVYSFGVLLLELITG 214
++ G + T FV+ + D++S G+LL ++ G
Sbjct: 174 -------QLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 51/212 (24%)
Query: 30 ELGDGNFGAVKRVMEERGG----------SRKIFLDEVSVLLRV-SHPNLVGLLGFCLEK 78
++G G++ KR + + S++ +E+ +LLR HPN++ L +
Sbjct: 29 DIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDG 88
Query: 79 GEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL--DIARALEYLHSQADPPII 136
++ E L D++ L +S R + A+ I + +EYLH+Q ++
Sbjct: 89 KYVYVVTELXKGGELLDKI-------LRQKFFSEREASAVLFTITKTVEYLHAQG---VV 138
Query: 137 HRDIKSSNILLIDDN----HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNT 192
HRD+K SNIL +D++ ++ DFG K ++ G + T
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAK--------------QLRAENGLLXTPCYTA 184
Query: 193 GFVSTK----------SDVYSFGVLLLELITG 214
FV+ + D++S GVLL +TG
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 71/268 (26%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITG------------------LKSIQGS 221
T + LN + D++S G ++ EL+TG L G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 222 ATLAEWTEECRRNKNVEVWAQMLDPKLN 249
L + + E RN ++ AQM PK+N
Sbjct: 245 ELLKKISSESARNY-IQSLAQM--PKMN 269
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 71/268 (26%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 146
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 147 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 190
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITG------------------LKSIQGS 221
T + LN + D++S G ++ EL+TG L G+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 222 ATLAEWTEECRRNKNVEVWAQMLDPKLN 249
L + + E RN ++ AQM PK+N
Sbjct: 251 ELLKKISSESARNY-IQSLAQM--PKMN 275
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFGAVKRVMEE----RGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G V + R +KI L E+ +LLR H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 142
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 143 YIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA---DPDH--DHTGFLTE--YV 192
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 12 NDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSR---KIF-------LDEVSVLL 61
+D R++IG ++ LG G FG VK E G + KI LD V +
Sbjct: 9 HDGRVKIG----HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIR 64
Query: 62 R-------VSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRL 114
R HP+++ L + +++EY++ LFD Y G L
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFD-----YICKNGRLDEKESR 119
Query: 115 SIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL---GPFNDPNR 171
+ I ++Y H ++HRD+K N+LL +AK+ADFGL + G F
Sbjct: 120 RLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF----- 171
Query: 172 PKRQTSIKGSFGYVDTNYLNTG-FVSTKSDVYSFGVLLLELITG 214
R + GS Y ++ + + D++S GV+L L+ G
Sbjct: 172 -LRXSC--GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 44/237 (18%)
Query: 15 RIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIF--------------------- 53
R + G S+ + +LG G +G V E+ G S K
Sbjct: 28 RKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIE 87
Query: 54 ------LDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGV 107
+E+S+L + HPN++ L +K L+ E+ LF+++ +
Sbjct: 88 KFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK----- 142
Query: 108 LSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDN---HAKLADFGLCKLG 164
+ +I I + YLH I+HRDIK NILL + N + K+ DFGL
Sbjct: 143 FDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199
Query: 165 PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
+ R + T+ Y+ L + + K DV+S GV++ L+ G G
Sbjct: 200 SKDYKLRDRLGTAY-----YIAPEVLKKKY-NEKCDVWSCGVIMYILLCGYPPFGGQ 250
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 142
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D+ K+ DFGL R T + + GYV
Sbjct: 143 IHS-AD--IIHRDLKPSNLAVNEDSELKILDFGLA------------RHTDDEMT-GYVA 186
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFGAVKRVMEE----RGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G V + R +KI L E+ +LLR H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 143
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 144 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDH--DHTGFLTE--YV 193
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 241
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFGAVKRVMEE----RGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G V + R +KI L E+ +LLR H N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 144
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 145 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDH--DHTGFLTE--YV 194
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 242
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFGAVKRVMEE----RGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G V + R +KI L E+ +LLR H N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 135
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 136 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDH--DHTGFLTE--YV 185
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 233
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 12 NDFRIRIGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVG 70
N R+ +G G VY +L + A+K + E + +E+++ + H N+V
Sbjct: 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ 83
Query: 71 LLGFCLEKGEQLLLLEYLANKSLFDRMHTYYG------QSLGVLSWSNRLSIALDIARAL 124
LG E G + +E + SL + + +G Q++G + I L
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ--------ILEGL 135
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHA-KLADFGLCK-LGPFNDPNRPKRQTSIKGSF 182
+YLH D I+HRDIK N+L+ + K++DFG K L N P +T G+
Sbjct: 136 KYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN----PCTET-FTGTL 187
Query: 183 GYVDTNYLNTGF--VSTKSDVYSFGVLLLELITG 214
Y+ ++ G +D++S G ++E+ TG
Sbjct: 188 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFGAVKRVMEE----RGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G V + R +KI L E+ +LLR H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 142
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 143 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDH--DHTGFLTE--YV 192
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFGAVKRVMEE----RGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G V + R +KI L E+ +LLR H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 136
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 137 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDH--DHTGFLTE--YV 186
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 234
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 18 IGVGATSFVYLAELGD-GNFGAVKRVMEERGGS--RKIFLDEVSVLLRVSHPNLVGLLGF 74
+G G+ V D G A+K+ +E +KI + E+ +L ++ H NLV LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 75 CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPP 134
C +K L+ E++ + ++ D + + L + I + + HS
Sbjct: 93 CKKKKRWYLVFEFV-DHTILDDLELFPNG----LDYQVVQKYLFQIINGIGFCHSHN--- 144
Query: 135 IIHRDIKSSNILLIDDNHAKLADFGLCK 162
IIHRDIK NIL+ KL DFG +
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFAR 172
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 146
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D+ K+ DFGL R T + + GYV
Sbjct: 147 IHS-AD--IIHRDLKPSNLAVNEDSELKILDFGLA------------RHTDDEMT-GYVA 190
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFGAVKRVMEE----RGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G V + R +KI L E+ +LLR H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 136
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 137 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDH--DHTGFLTE--YV 186
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 234
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 41/226 (18%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSR---KIF-------LDEVSV 59
+ +D R++IG +V LG G FG VK + G + KI LD V
Sbjct: 2 SKHDGRVKIG----HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK 57
Query: 60 LLR-------VSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSN 112
+ R HP+++ L + +++EY++ LFD Y G +
Sbjct: 58 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD-----YICKHGRVEEME 112
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL---GPFNDP 169
+ I A++Y H ++HRD+K N+LL +AK+ADFGL + G F
Sbjct: 113 ARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--- 166
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTG-FVSTKSDVYSFGVLLLELITG 214
+TS GS Y ++ + + D++S GV+L L+ G
Sbjct: 167 ----LRTSC-GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 12 NDFRIRIGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVG 70
N R+ +G G VY +L + A+K + E + +E+++ + H N+V
Sbjct: 10 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ 69
Query: 71 LLGFCLEKGEQLLLLEYLANKSLFDRMHTYYG------QSLGVLSWSNRLSIALDIARAL 124
LG E G + +E + SL + + +G Q++G + I L
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ--------ILEGL 121
Query: 125 EYLHSQADPPIIHRDIKSSNILLIDDNHA-KLADFGLCK-LGPFNDPNRPKRQTSIKGSF 182
+YLH D I+HRDIK N+L+ + K++DFG K L N P +T G+
Sbjct: 122 KYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN----PCTET-FTGTL 173
Query: 183 GYVDTNYLNTGF--VSTKSDVYSFGVLLLELITG 214
Y+ ++ G +D++S G ++E+ TG
Sbjct: 174 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 207
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 147
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T+ + + GYV
Sbjct: 148 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTADEMT-GYVA 191
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 32 LSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 145
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 146 IHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLA------------RHTDDEMT-GYVA 189
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 147
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T+ + + GYV
Sbjct: 148 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTADEMT-GYVA 191
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+S+ ++H ++VG GF + ++LE +SL + +H + L+
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH----KRRKALTEPEARY 119
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQ 175
I +YLH +IHRD+K N+ L +D K+ DFGL ++ +R+
Sbjct: 120 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG----ERK 172
Query: 176 TSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+ G+ Y+ L+ S + DV+S G ++ L+ G + S
Sbjct: 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 219
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 147
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T+ + + GYV
Sbjct: 148 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTADEMT-GYVA 191
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 34/224 (15%)
Query: 25 FVYLAELGDGNFGAVKRVMEE----RGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G V + R +KI L E+ +LLR H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 142
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKR---QTSIKGSF 182
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ + +
Sbjct: 143 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLXEXVATRW 196
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
LN+ + D++S G +L E+++ G L +
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 34/224 (15%)
Query: 25 FVYLAELGDGNFGAVKRVMEE----RGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G V + R +KI L E+ +LLR H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 143
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKR---QTSIKGSF 182
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ + +
Sbjct: 144 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDHDHTGFLXEXVATRW 197
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
LN+ + D++S G +L E+++ G L +
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 241
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+S+ ++H ++VG GF + ++LE +SL + +H + L+
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH----KRRKALTEPEARY 145
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQ 175
I +YLH +IHRD+K N+ L +D K+ DFGL ++ +R+
Sbjct: 146 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG----ERK 198
Query: 176 TSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+ G+ Y+ L+ S + DV+S G ++ L+ G + S
Sbjct: 199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 245
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+S+ ++H ++VG GF + ++LE +SL + +H + L+
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LH----KRRKALTEPEARY 143
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQ 175
I +YLH +IHRD+K N+ L +D K+ DFGL ++ +R+
Sbjct: 144 YLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG----ERK 196
Query: 176 TSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+ G+ Y+ L+ S + DV+S G ++ L+ G + S
Sbjct: 197 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 243
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 54 LDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNR 113
L+E +L +V+ V L + E + L L+ L N + H Y+ G +
Sbjct: 232 LNEKQILEKVNS-RFVVSLAYAYETKDALCLVLTLMNGGDL-KFHIYHMGQAG-FPEARA 288
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK 173
+ A +I LE LH + I++RD+K NILL D H +++D GL + P+
Sbjct: 289 VFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAV-------HVPE 338
Query: 174 RQTSIK---GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQ 219
QT IK G+ GY+ + + D ++ G LL E+I G Q
Sbjct: 339 GQT-IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 38 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 97
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 151
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 152 IHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLA------------RHTDDEMT-GYVA 195
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 20 VGATSFVYLAELGDGNFG-------------------AVKRVMEERGGS-RKIFLDEVSV 59
+ ++ ++ ELG+ FG A+K + ++ G R+ F E +
Sbjct: 23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML 82
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRM-----HTYYGQS------LGVL 108
R+ HPN+V LLG + ++ Y ++ L + + H+ G + L
Sbjct: 83 RARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 142
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+ + + IA +EYL S ++H+D+ + N+L+ D + K++D GL + D
Sbjct: 143 EPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD 199
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ + + ++ + G S SD++S+GV+L E+ + GL+ G
Sbjct: 200 YYKLLGNSLL--PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 250
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 62/228 (27%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS------IALDI 120
L LE+ + L+ +L G L + +L+ + I
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLM------------GADLNNIVKXQKLTDDHVQFLIYQI 134
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKG 180
R L+Y+HS AD IIHRD+K SN+ + +D K+ DFGL R T +
Sbjct: 135 LRGLKYIHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLA------------RHTDDEM 179
Query: 181 SFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
+ GYV T + LN + D++S G ++ EL+TG G+
Sbjct: 180 T-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 51/222 (22%)
Query: 20 VGATSFVYLAELGDGNFGAVKRVMEERGG----------SRKIFLDEVSVLLRV-SHPNL 68
V + +V +G G++ KR + + S++ +E+ +LLR HPN+
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNI 83
Query: 69 VGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS--IALDIARALEY 126
+ L + L+ E + L D++ L +S R + + I + +EY
Sbjct: 84 ITLKDVYDDGKHVYLVTELMRGGELLDKI-------LRQKFFSEREASFVLHTIGKTVEY 136
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHA----KLADFGLCKLGPFNDPNRPKRQTSIKGSF 182
LHSQ ++HRD+K SNIL +D++ ++ DFG K ++
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK--------------QLRAEN 179
Query: 183 GYVDTNYLNTGFVSTK----------SDVYSFGVLLLELITG 214
G + T FV+ + D++S G+LL ++ G
Sbjct: 180 GLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 31 LGDGNFGAVKRVMEE----RGGSRKI----------FLDEVSVLLRVSHPNLVGLLGFCL 76
+G G++G VK +++ R ++KI F E+ ++ + HPN++ L
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 93
Query: 77 EKGEQLLLLEYLANKSLFDR-MHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
+ + L++E LF+R +H V S+ I D+ A+ Y H +
Sbjct: 94 DNTDIYLVMELCTGGELFERVVHK------RVFRESDAARIMKDVLSAVAYCHKLN---V 144
Query: 136 IHRDIKSSNILLI---DDNHAKLADFGLCKLGPFNDPNRPKRQTSIK-GSFGYVDTNYLN 191
HRD+K N L + D+ KL DFGL +P + K G+ YV L
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF------KPGKMMRTKVGTPYYVSPQVLE 198
Query: 192 TGFVSTKSDVYSFGVLLLELITG 214
G + D +S GV++ L+ G
Sbjct: 199 -GLYGPECDEWSAGVMMYVLLCG 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 31 LGDGNFGAVKRVMEE----RGGSRKI----------FLDEVSVLLRVSHPNLVGLLGFCL 76
+G G++G VK +++ R ++KI F E+ ++ + HPN++ L
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 77 EKGEQLLLLEYLANKSLFDR-MHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
+ + L++E LF+R +H V S+ I D+ A+ Y H +
Sbjct: 77 DNTDIYLVMELCTGGELFERVVHK------RVFRESDAARIMKDVLSAVAYCHKLN---V 127
Query: 136 IHRDIKSSNILLI---DDNHAKLADFGLCKLGPFNDPNRPKRQTSIK-GSFGYVDTNYLN 191
HRD+K N L + D+ KL DFGL +P + K G+ YV L
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF------KPGKMMRTKVGTPYYVSPQVLE 181
Query: 192 TGFVSTKSDVYSFGVLLLELITG 214
G + D +S GV++ L+ G
Sbjct: 182 -GLYGPECDEWSAGVMMYVLLCG 203
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 54 LDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNR 113
L+E +L +V+ V L + E + L L+ L N + H Y+ G +
Sbjct: 232 LNEKQILEKVNS-RFVVSLAYAYETKDALCLVLTLMNGGDL-KFHIYHMGQAG-FPEARA 288
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK 173
+ A +I LE LH + I++RD+K NILL D H +++D GL + P+
Sbjct: 289 VFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAV-------HVPE 338
Query: 174 RQTSIK---GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQ 219
QT IK G+ GY+ + + D ++ G LL E+I G Q
Sbjct: 339 GQT-IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 36/214 (16%)
Query: 18 IGVGATSFVYLAELG-DGNFGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
IG G V+ A+ DG +KRV + + EV L ++ H N+V G C
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVHYNG-CW 73
Query: 77 E----------------KGEQLLL-LEYLANKSLFDRMHTYYGQSLG-VLSWSNRLSIAL 118
+ K + L + +E+ +L + G+ L VL+ L +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA----LELFE 129
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSI 178
I + ++Y+HS+ +I+RD+K SNI L+D K+ DFGL + N KR S
Sbjct: 130 QITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVT----SLKNDGKRXRS- 181
Query: 179 KGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELI 212
KG+ Y+ +++ + D+Y+ G++L EL+
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 145
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 146 IHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLA------------RHTDDEMT-GYVA 189
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 83
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 137
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 138 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 181
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 49 SRKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVL 108
+++ F+ E ++ + HP++V L+G E+ +++ Y + + Y ++ L
Sbjct: 68 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYP-----YGELGHYLERNKNSL 122
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+ +L I +A+ YL S +HRDI NIL+ KL DFGL + D
Sbjct: 123 KVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY--IED 177
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ K + + ++ +N +T SDV+ F V + E+++
Sbjct: 178 EDYYKASVT-RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 49 SRKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVL 108
+++ F+ E ++ + HP++V L+G E+ +++ Y + + Y ++ L
Sbjct: 52 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYP-----YGELGHYLERNKNSL 106
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+ +L I +A+ YL S +HRDI NIL+ KL DFGL + D
Sbjct: 107 KVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY--IED 161
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ K + + ++ +N +T SDV+ F V + E+++
Sbjct: 162 EDYYKASVT-RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 20 VGATSFVYLAELGDGNFG-------------------AVKRVMEERGGS-RKIFLDEVSV 59
+ ++ ++ ELG+ FG A+K + ++ G R+ F E +
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML 65
Query: 60 LLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRM-----HTYYGQS------LGVL 108
R+ HPN+V LLG + ++ Y ++ L + + H+ G + L
Sbjct: 66 RARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 125
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+ + + IA +EYL S ++H+D+ + N+L+ D + K++D GL + D
Sbjct: 126 EPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD 182
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT-GLKSIQG 220
+ + + ++ + G S SD++S+GV+L E+ + GL+ G
Sbjct: 183 YYKLLGNSLL--PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 233
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 25 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 84
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 85 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 138
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 139 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 182
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 224
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 36/187 (19%)
Query: 56 EVSVLLRVSHPNLVGLLGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSW 110
E+ +L V+H N++ LL LE+ + + L+ L + +L +H
Sbjct: 73 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHE------ 126
Query: 111 SNRLSIAL-DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
R+S L + +++LHS IIHRD+K SNI++ D K+ DFGL + N
Sbjct: 127 --RMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM 181
Query: 170 NRPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
P YV T Y L G+ + D++S G ++ EL+ G QG+
Sbjct: 182 MTP-----------YVVTRYYRAPEVILGMGY-AANVDIWSVGCIMGELVKGCVIFQGTD 229
Query: 223 TLAEWTE 229
+ +W +
Sbjct: 230 HIDQWNK 236
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 49 SRKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVL 108
+++ F+ E ++ + HP++V L+G E+ +++ Y + + Y ++ L
Sbjct: 56 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYP-----YGELGHYLERNKNSL 110
Query: 109 SWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFND 168
+ +L I +A+ YL S +HRDI NIL+ KL DFGL + D
Sbjct: 111 KVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY--IED 165
Query: 169 PNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
+ K + + ++ +N +T SDV+ F V + E+++
Sbjct: 166 EDYYKASVT-RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 136
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 137 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 180
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 146
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 147 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 190
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 142
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 143 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 186
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 83
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 137
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 138 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 181
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 142
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 143 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 186
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 71/268 (26%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 136
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + G+V
Sbjct: 137 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMA-GFVA 180
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITG------------------LKSIQGS 221
T + LN + D++S G ++ EL+TG L G+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 222 ATLAEWTEECRRNKNVEVWAQMLDPKLN 249
L + + E RN ++ AQM PK+N
Sbjct: 241 ELLKKISSESARNY-IQSLAQM--PKMN 265
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 145
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 146 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 189
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 26 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 85
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 86 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 139
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 140 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 183
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 152
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 153 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 196
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 152
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 153 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 196
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 145
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 146 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 189
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 38 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 97
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 151
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 152 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 195
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 20/187 (10%)
Query: 34 GNFGAVKRVMEERGGSRKI--FLDEVSVLLRVSHPNLVGLLGFCLEKG--EQLLLLEYLA 89
GN VK + +RK F +E L SHPN++ +LG C L+ ++
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 90 NKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLID 149
SL++ +H G + V+ S + ALD+AR + +LH+ P+I R +S ++ID
Sbjct: 93 YGSLYNVLHE--GTNF-VVDQSQAVKFALDMARGMAFLHTLE--PLIPRHALNSRSVMID 147
Query: 150 DNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVST---KSDVYSFGV 206
++ K F P R + +V L T +D++SF V
Sbjct: 148 EDMTARISMADVKFS-FQSPGR-------MYAPAWVAPEALQKKPEDTNRRSADMWSFAV 199
Query: 207 LLLELIT 213
LL EL+T
Sbjct: 200 LLWELVT 206
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 147
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 148 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 191
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 46 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 105
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 159
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 160 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 203
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 152
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 153 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 196
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 160
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 161 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 204
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 142
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 143 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 186
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 50 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 109
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 163
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 164 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 207
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KXQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 146
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 147 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 190
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFG----AVKRVMEERGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G A V + R +KI L E+ +LL H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 140
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL + K+ DFGL ++ DP+ + YV
Sbjct: 141 YIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVA---DPDHDHTGFLTE----YV 190
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 238
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 36/206 (17%)
Query: 30 ELGDGNFGAVKRVMEERGG-------------SRKIFLD---EVSVLLRVSHPNLVGLLG 73
ELG G F V+R + + G S + F E + ++ HPN+V L
Sbjct: 12 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 71
Query: 74 FCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
E+ L+ + + LF+ + +Y ++ + I ++ Y HS
Sbjct: 72 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEA-------DASHCIQQILESIAYCHSNG 124
Query: 132 DPPIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN 188
I+HR++K N+LL KLADFGL + N + G+ GY+
Sbjct: 125 ---IVHRNLKPENLLLASKAKGAAVKLADFGLAI-----EVNDSEAWHGFAGTPGYLSPE 176
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITG 214
L S D+++ GV+L L+ G
Sbjct: 177 VLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 36/206 (17%)
Query: 30 ELGDGNFGAVKRVMEERGG-------------SRKIFLD---EVSVLLRVSHPNLVGLLG 73
ELG G F V+R + + G S + F E + ++ HPN+V L
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 74 FCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
E+ L+ + + LF+ + +Y ++ + I ++ Y HS
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEA-------DASHCIQQILESIAYCHSNG 125
Query: 132 DPPIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN 188
I+HR++K N+LL KLADFGL + N + G+ GY+
Sbjct: 126 ---IVHRNLKPENLLLASKAKGAAVKLADFGLAI-----EVNDSEAWHGFAGTPGYLSPE 177
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITG 214
L S D+++ GV+L L+ G
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 36/206 (17%)
Query: 30 ELGDGNFGAVKRVMEERGG-------------SRKIFLD---EVSVLLRVSHPNLVGLLG 73
ELG G F V+R + + G S + F E + ++ HPN+V L
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 74 FCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
E+ L+ + + LF+ + +Y ++ + I ++ Y HS
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEA-------DASHCIQQILESIAYCHSNG 125
Query: 132 DPPIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN 188
I+HR++K N+LL KLADFGL + N + G+ GY+
Sbjct: 126 ---IVHRNLKPENLLLASKAKGAAVKLADFGLAI-----EVNDSEAWHGFAGTPGYLSPE 177
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITG 214
L S D+++ GV+L L+ G
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 41/226 (18%)
Query: 10 ATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSR---KIF-------LDEVSV 59
+ +D R++IG +V LG G FG VK + G + KI LD V
Sbjct: 2 SKHDGRVKIG----HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK 57
Query: 60 LLR-------VSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSN 112
+ R HP+++ L + +++EY++ LFD Y G +
Sbjct: 58 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD-----YICKHGRVEEME 112
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL---GPFNDP 169
+ I A++Y H ++HRD+K N+LL +AK+ADFGL + G F
Sbjct: 113 ARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--- 166
Query: 170 NRPKRQTSIKGSFGYVDTNYLNTG-FVSTKSDVYSFGVLLLELITG 214
R + GS Y ++ + + D++S GV+L L+ G
Sbjct: 167 ---LRDSC--GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 71/268 (26%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + G+V
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMA-GFVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITG------------------LKSIQGS 221
T + LN + D++S G ++ EL+TG L G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 222 ATLAEWTEECRRNKNVEVWAQMLDPKLN 249
L + + E RN ++ AQM PK+N
Sbjct: 245 ELLKKISSESARNY-IQSLAQM--PKMN 269
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 36/206 (17%)
Query: 30 ELGDGNFGAVKRVMEERGG-------------SRKIFLD---EVSVLLRVSHPNLVGLLG 73
ELG G F V+R + + G S + F E + ++ HPN+V L
Sbjct: 36 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 95
Query: 74 FCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
E+ L+ + + LF+ + +Y ++ + I ++ Y HS
Sbjct: 96 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEA-------DASHCIQQILESIAYCHSNG 148
Query: 132 DPPIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN 188
I+HR++K N+LL KLADFGL + N + G+ GY+
Sbjct: 149 ---IVHRNLKPENLLLASKAKGAAVKLADFGLAI-----EVNDSEAWHGFAGTPGYLSPE 200
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITG 214
L S D+++ GV+L L+ G
Sbjct: 201 VLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 52/231 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L +G G +GAV ++ R G++ K E+ +L + H N++GL
Sbjct: 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGL 89
Query: 72 LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS------IALDIARALE 125
L E L + + F + + G LG L +L + + + L
Sbjct: 90 LDVFTPD-------ETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLR 142
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+H+ IIHRD+K N+ + +D K+ DFGL RQ + G V
Sbjct: 143 YIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA------------RQADSE-MXGXV 186
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
T + LN + D++S G ++ E+ITG +GS L + E
Sbjct: 187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE 237
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 32/165 (19%)
Query: 19 GVGATSFVYLAELGDGNFGAVKR--------------VMEERGGSRKIFLDEVSVLLRVS 64
G A + V +G G FG V R EER R+ + + +V+LR
Sbjct: 2 GTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQ-TVMLR-- 58
Query: 65 HPNLVGLLGFCLEKG---EQLLLL-EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDI 120
H N++G + + QL L+ +Y + SLFD ++ Y G++ +AL
Sbjct: 59 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALST 112
Query: 121 ARALEYLH-----SQADPPIIHRDIKSSNILLIDDNHAKLADFGL 160
A L +LH +Q P I HRD+KS NIL+ + +AD GL
Sbjct: 113 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 157
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + G+V
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMA-GFVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLXGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 22 ATSFVYLAELGDGNFGAVKR-VMEERGGSRKIF--LDEVS----------VLLRVSHPNL 68
A L +G G +G V R + + KIF DE S V+LR H N+
Sbjct: 7 AHQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLR--HENI 64
Query: 69 VGLLGFCL---EKGEQLLLL-EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARAL 124
+G + + QL L+ Y SL+D + L L + L I L IA L
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGL 118
Query: 125 EYLH-----SQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL-----GPFNDPNRPKR 174
+LH +Q P I HRD+KS NIL+ + +AD GL + + N P+
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
Query: 175 QTSIKGSFGYVDTNYLNTGFVSTKS-DVYSFGVLLLEL 211
T + +D F S K D+++FG++L E+
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 23/210 (10%)
Query: 14 FRIRIGVGATSFVYLAELGDGNFGAVKRVMEERG---GSRKIFLDEVSVLLRVSHPNLVG 70
F I IG G+ VY + +++R R+ F +E L + HPN+V
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 71 LLGF--CLEKGEQLLLL--EYLANKSLFDRMHTYYGQSLGVL-SWSNRLSIALDIARALE 125
KG++ ++L E + +L + + + VL SW + I + L+
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQ 143
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDN-HAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGY 184
+LH++ PPIIHRD+K NI + K+ D GL L R ++ G+ +
Sbjct: 144 FLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL------KRASFAKAVIGTPEF 196
Query: 185 VDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + DVY+FG LE T
Sbjct: 197 XAPEXYEEKYDES-VDVYAFGXCXLEXATS 225
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 41/216 (18%)
Query: 31 LGDGNFGAV-KRVMEERG--------GSRKIFLDEVSV--LLRVSHPNL----VGLLGFC 75
+G G +GAV K ++ER +R+ F++E ++ + + H N+ VG
Sbjct: 21 IGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVT 80
Query: 76 LE-KGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQ---- 130
+ + E LL++EY N SL + SL W + +A + R L YLH++
Sbjct: 81 ADGRMEYLLVMEYYPNGSLXKYL------SLHTSDWVSSCRLAHSVTRGLAYLHTELPRG 134
Query: 131 --ADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQ----TSIKGSFGY 184
P I HRD+ S N+L+ +D ++DFGL N RP + S G+ Y
Sbjct: 135 DHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRY 194
Query: 185 VDTNYLNTGFVSTKS--------DVYSFGVLLLELI 212
+ L G V+ + D+Y+ G++ E+
Sbjct: 195 MAPEVLE-GAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 107/267 (40%), Gaps = 72/267 (26%)
Query: 18 IGVGATSFVYLAE--LGDGNFGAVKRV-MEERGGSRKIFLDEVSVLLRVSHPNLVGLLGF 74
+G G V+ A+ + D N+ A+KR+ + R +R+ + EV L ++ HP +V
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNY-AIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA 72
Query: 75 CLEKGEQLLLLEY-------------LANKSLFD-------RMHTYYGQ-SLGVLS---- 109
LE + E L++ S D RM + + ++G L
Sbjct: 73 WLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSP 132
Query: 110 ------------------WSNR------------LSIALDIARALEYLHSQADPPIIHRD 139
W NR L I + IA A+E+LHS+ ++HRD
Sbjct: 133 KVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRD 189
Query: 140 IKSSNILLIDDNHAKLADFGLCKLGPFNDPNR------PKRQTSIKGSFG---YVDTNYL 190
+K SNI D+ K+ DFGL ++ + P T G G Y+ +
Sbjct: 190 LKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATH-XGQVGTKLYMSPEQI 248
Query: 191 NTGFVSTKSDVYSFGVLLLELITGLKS 217
+ S K D++S G++L EL+ +
Sbjct: 249 HGNNYSHKVDIFSLGLILFELLYSFST 275
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 33/221 (14%)
Query: 19 GVGATSFVYLAELGDGNFGAV----KRVMEERGGSRKI------------FLDEVSVLLR 62
G A + + LG G+FG V R+ ++ + I L EV +L +
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 63 VSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIAR 122
+ HPN++ L + ++ E LFD + S + I +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQVFS 132
Query: 123 ALEYLHSQADPPIIHRDIKSSNILLID---DNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
+ Y+H I+HRD+K NILL D K+ DFGL F + K +
Sbjct: 133 GITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI--- 184
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
G+ Y+ L G K DV+S GV+L L++G G
Sbjct: 185 GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 22 ATSFVYLAELGDGNFGAVKR-VMEERGGSRKIF--LDEVS----------VLLRVSHPNL 68
A L +G G +G V R + + KIF DE S V+LR H N+
Sbjct: 36 ARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLR--HENI 93
Query: 69 VGLLGFCL---EKGEQLLLL-EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARAL 124
+G + + QL L+ Y SL+D + L L + L I L IA L
Sbjct: 94 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGL 147
Query: 125 EYLH-----SQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL-----GPFNDPNRPKR 174
+LH +Q P I HRD+KS NIL+ + +AD GL + + N P+
Sbjct: 148 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 207
Query: 175 QTSIKGSFGYVDTNYLNTGFVSTKS-DVYSFGVLLLEL 211
T + +D F S K D+++FG++L E+
Sbjct: 208 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 22 ATSFVYLAELGDGNFGAVKR-VMEERGGSRKIF--LDEVS----------VLLRVSHPNL 68
A L +G G +G V R + + KIF DE S V+LR H N+
Sbjct: 7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLR--HENI 64
Query: 69 VGLLGFCL---EKGEQLLLL-EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARAL 124
+G + + QL L+ Y SL+D + L L + L I L IA L
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGL 118
Query: 125 EYLH-----SQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL-----GPFNDPNRPKR 174
+LH +Q P I HRD+KS NIL+ + +AD GL + + N P+
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
Query: 175 QTSIKGSFGYVDTNYLNTGFVSTKS-DVYSFGVLLLEL 211
T + +D F S K D+++FG++L E+
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFGAVKRVMEE----RGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G V + R +KI L E+ +LLR H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + + LS + I R L+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH------LSNDHICYFLYQILRGLK 142
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 143 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDH--DHTGFLTE--YV 192
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 33/221 (14%)
Query: 19 GVGATSFVYLAELGDGNFGAV----KRVMEERGGSRKI------------FLDEVSVLLR 62
G A + + LG G+FG V R+ ++ + I L EV +L +
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 63 VSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIAR 122
+ HPN++ L + ++ E LFD + S + I +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQVFS 132
Query: 123 ALEYLHSQADPPIIHRDIKSSNILLID---DNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
+ Y+H I+HRD+K NILL D K+ DFGL F + K +
Sbjct: 133 GITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI--- 184
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
G+ Y+ L G K DV+S GV+L L++G G
Sbjct: 185 GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 23/206 (11%)
Query: 18 IGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVS--HPNLVGLLGFC 75
+G GA + + D AVKR++ E F D LLR S HPN++ FC
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFS----FADREVQLLRESDEHPNVIRY--FC 85
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
EK Q +Y+A + + Y Q +++ L +LHS I
Sbjct: 86 TEKDRQF---QYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN---I 139
Query: 136 IHRDIKSSNILL-IDDNHAK----LADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYL 190
+HRD+K NIL+ + + H K ++DFGLCK + R++ + G+ G++ L
Sbjct: 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR-HSFSRRSGVPGTEGWIAPEML 198
Query: 191 NTGFVSTKS---DVYSFGVLLLELIT 213
+ + D++S G + +I+
Sbjct: 199 SEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 25 FVYLAELGDGNFGAVK----RVMEERGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L +G+G +G V V + R +KI L E+ +LLR H N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 70 G----LLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G L LE + +++ L L+ + + LS + I R L+
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS------QQLSNDHICYFLYQILRGLK 158
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKR---QTSIKGSF 182
Y+HS ++HRD+K SN+L+ K+ DFGL ++ DP + +
Sbjct: 159 YIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIA---DPEHDHTGFLTEXVATRW 212
Query: 183 GYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
LN+ + D++S G +L E+++ G L +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 256
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLAGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 25 FVYLAELGDGNFG----AVKRVMEERGGSRKI-----------FLDEVSVLLRVSHPNLV 69
+ L+ +G+G +G A V + R +KI L E+ +LL H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 70 GL----LGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
G+ +E+ + + +++ L L+ + T + LS + I R L+
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLK 140
Query: 126 YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYV 185
Y+HS ++HRD+K SN+LL K+ DFGL ++ DP+ T YV
Sbjct: 141 YIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA---DPDH--DHTGFLTE--YV 190
Query: 186 DTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
T + LN+ + D++S G +L E+++ G L +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 88
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 89 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 143
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK-RQTSIKGSFGYV 185
LHS +I+RD+K N+L+ + + ++ DFG K R K R + G+ Y+
Sbjct: 144 LHSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 192
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 50 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 109
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 163
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + GYV
Sbjct: 164 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMX-GYVA 207
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 36/187 (19%)
Query: 56 EVSVLLRVSHPNLVGLLGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSW 110
E+ +L V+H N++ LL LE+ + + L+ L + +L +H
Sbjct: 71 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH------- 123
Query: 111 SNRLSIAL-DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDP 169
R+S L + +++LHS IIHRD+K SNI++ D K+ DFGL + N
Sbjct: 124 -ERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFM 179
Query: 170 NRPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
P YV T Y L G+ D++S G ++ EL+ G QG+
Sbjct: 180 MTP-----------YVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGELVKGSVIFQGTD 227
Query: 223 TLAEWTE 229
+ +W +
Sbjct: 228 HIDQWNK 234
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 32/162 (19%)
Query: 22 ATSFVYLAELGDGNFGAVKR--------------VMEERGGSRKIFLDEVSVLLRVSHPN 67
A + V +G G FG V R EER R+ + + +V+LR H N
Sbjct: 3 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQ-TVMLR--HEN 59
Query: 68 LVGLLGFCLEKG---EQLLLL-EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
++G + + QL L+ +Y + SLFD ++ Y G++ +AL A
Sbjct: 60 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASG 113
Query: 124 LEYLH-----SQADPPIIHRDIKSSNILLIDDNHAKLADFGL 160
L +LH +Q P I HRD+KS NIL+ + +AD GL
Sbjct: 114 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 155
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ D+GL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDYGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 32/162 (19%)
Query: 22 ATSFVYLAELGDGNFGAVKR--------------VMEERGGSRKIFLDEVSVLLRVSHPN 67
A + V +G G FG V R EER R+ + + +V+LR H N
Sbjct: 2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQ-TVMLR--HEN 58
Query: 68 LVGLLGFCLEKG---EQLLLL-EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
++G + + QL L+ +Y + SLFD ++ Y G++ +AL A
Sbjct: 59 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASG 112
Query: 124 LEYLH-----SQADPPIIHRDIKSSNILLIDDNHAKLADFGL 160
L +LH +Q P I HRD+KS NIL+ + +AD GL
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 107 VLSWSNRLSIALDIARALEYLHSQ-------ADPPIIHRDIKSSNILLIDDNHAKLADFG 159
V+SW+ IA +AR L YLH P I HRDIKS N+LL ++ A +ADFG
Sbjct: 117 VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176
Query: 160 LC-------KLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELI 212
L G + +R + + G + N+ F+ + D+Y+ G++L EL
Sbjct: 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAI--NFQRDAFL--RIDMYAMGLVLWELA 232
Query: 213 TGLKSIQG 220
+ + G
Sbjct: 233 SRCTAADG 240
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 177
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K T ++ G+ Y+
Sbjct: 178 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGATWTLCGTPEYL 226
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 32/162 (19%)
Query: 22 ATSFVYLAELGDGNFGAVKR--------------VMEERGGSRKIFLDEVSVLLRVSHPN 67
A + V +G G FG V R EER R+ + + +V+LR H N
Sbjct: 8 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQ-TVMLR--HEN 64
Query: 68 LVGLLGFCLEKG---EQLLLL-EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
++G + + QL L+ +Y + SLFD ++ Y G++ +AL A
Sbjct: 65 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASG 118
Query: 124 LEYLH-----SQADPPIIHRDIKSSNILLIDDNHAKLADFGL 160
L +LH +Q P I HRD+KS NIL+ + +AD GL
Sbjct: 119 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 160
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 32/162 (19%)
Query: 22 ATSFVYLAELGDGNFGAVKR--------------VMEERGGSRKIFLDEVSVLLRVSHPN 67
A + V +G G FG V R EER R+ + + +V+LR H N
Sbjct: 28 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQ-TVMLR--HEN 84
Query: 68 LVGLLGFCLEKG---EQLLLL-EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
++G + + QL L+ +Y + SLFD ++ Y G++ +AL A
Sbjct: 85 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASG 138
Query: 124 LEYLH-----SQADPPIIHRDIKSSNILLIDDNHAKLADFGL 160
L +LH +Q P I HRD+KS NIL+ + +AD GL
Sbjct: 139 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 180
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 15 RIR-IGVGATSFVYLAE-LGDGNFGAVKRVMEERGGSRKIF---LDEVSVLLRVSHPNLV 69
RI+ IG G+ V L + + GN A+K + +++ K L+E +L V+ P LV
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L + +++EY+ +F + + +G S + A I EYLHS
Sbjct: 105 KLEFSFKDNSNLYMVMEYMPGGDMFSHL-----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 130 QADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYVDTN 188
+I+RD+K N+L+ + K+ADFG K R K +T + G+ Y+
Sbjct: 160 LD---LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 15 RIR-IGVGATSFVYLAE-LGDGNFGAVKRVMEERGGSRKIF---LDEVSVLLRVSHPNLV 69
RI+ IG G+ V L + + GN A+K + +++ K L+E +L V+ P LV
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L + +++EY+ +F + + +G S + A I EYLHS
Sbjct: 105 KLEFSFKDNSNLYMVMEYMPGGDMFSHL-----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 130 QADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYVDTN 188
+I+RD+K N+L+ + K+ADFG K R K +T + G+ Y+
Sbjct: 160 LD---LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 32/162 (19%)
Query: 22 ATSFVYLAELGDGNFGAVKR--------------VMEERGGSRKIFLDEVSVLLRVSHPN 67
A + V +G G FG V R EER R+ + + +V+LR H N
Sbjct: 41 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQ-TVMLR--HEN 97
Query: 68 LVGLLGFCLEKG---EQLLLL-EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
++G + + QL L+ +Y + SLFD ++ Y G++ +AL A
Sbjct: 98 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASG 151
Query: 124 LEYLH-----SQADPPIIHRDIKSSNILLIDDNHAKLADFGL 160
L +LH +Q P I HRD+KS NIL+ + +AD GL
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 193
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 62/228 (27%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G + K E+ +L + H N++GL
Sbjct: 56 LSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 115
Query: 72 L-----GFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS------IALDI 120
L LE+ + L+ +L G L + +L+ + I
Sbjct: 116 LDVFTPATSLEEFNDVYLVTHLM------------GADLNNIVKCQKLTDDHVQFLIYQI 163
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKG 180
R L+Y+HS AD IIHRD+K SN+ + +D K+ DFGL R T +
Sbjct: 164 LRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEM 208
Query: 181 SFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
+ GYV T + LN + D++S G ++ EL+TG G+
Sbjct: 209 T-GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGT 255
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 15 RIR-IGVGATSFVYLAE-LGDGNFGAVKRVMEERGGSRKIF---LDEVSVLLRVSHPNLV 69
RI+ IG G+ V L + + GN A+K + +++ K L+E +L V+ P LV
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 70 GLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
L + +++EY+ +F + + +G S + A I EYLHS
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 130 QADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYVDTN 188
+I+RD+K N+L+ + K+ADFG K R K +T + G+ Y+
Sbjct: 160 LD---LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 85/219 (38%), Gaps = 41/219 (18%)
Query: 24 SFVYLAELGDGNFG--------------AVKRVMEERGGS--RKIFLDEVSVLLRV-SHP 66
SF L+ LG G++G AVKR M G R L EV +V HP
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
V L E+G L L L SL + W D AL +
Sbjct: 118 CCV-RLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWG----YLRDTLLALAH 172
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFG-LCKLGPFNDPNRPKRQTSIKGSFGYV 185
LHSQ ++H D+K +NI L KL DFG L +LG T+ G
Sbjct: 173 LHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELG-----------TAGAGEVQEG 218
Query: 186 DTNYLNT----GFVSTKSDVYSFGVLLLELITGLKSIQG 220
D Y+ G T +DV+S G+ +LE+ ++ G
Sbjct: 219 DPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHG 257
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 35/219 (15%)
Query: 20 VGATSFVYLAELGDGNFGAV---------------------KRVMEERGGSRKIFLDEVS 58
VG +F L LG G +G V K + ++ + + E
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIA 117
VL + + L + + +L L+L+Y+ LF T+ Q ++ +
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELF----THLSQRERFTEHEVQIYVG 166
Query: 118 LDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTS 177
+I ALE+LH II+RDIK NILL + H L DFGL K F + +R
Sbjct: 167 -EIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK--EFV-ADETERAYD 219
Query: 178 IKGSFGYVDTNYLNTGFVSTKS--DVYSFGVLLLELITG 214
G+ Y+ + + G D +S GVL+ EL+TG
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 33/221 (14%)
Query: 19 GVGATSFVYLAELGDGNFGAV----KRVMEERGGSRKI------------FLDEVSVLLR 62
G A + + LG G+FG V R+ ++ + I L EV +L +
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 63 VSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIAR 122
+ HPN++ L + ++ E LFD + S + I +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII-----KRKRFSEHDAARIIKQVFS 132
Query: 123 ALEYLHSQADPPIIHRDIKSSNILLID---DNHAKLADFGLCKLGPFNDPNRPKRQTSIK 179
+ Y+H I+HRD+K NILL D K+ DFGL F + K +
Sbjct: 133 GITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI--- 184
Query: 180 GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
G+ Y+ L G K DV+S GV+L L++G G
Sbjct: 185 GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+++ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 62/228 (27%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS------IALDI 120
L LE+ + L+ +L G L + +L+ + I
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLM------------GADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKG 180
R L+Y+HS AD IIHRD+K SN+ + +D K+ DF L R T +
Sbjct: 135 LRGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFYLA------------RHTDDEM 179
Query: 181 SFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
+ GYV T + LN + D++S G ++ EL+TG G+
Sbjct: 180 T-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 71/268 (26%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 160
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + G V
Sbjct: 161 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMX-GXVA 204
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITG------------------LKSIQGS 221
T + LN + D++S G ++ EL+TG L G+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 222 ATLAEWTEECRRNKNVEVWAQMLDPKLN 249
L + + E RN ++ AQM PK+N
Sbjct: 265 ELLKKISSESARNY-IQSLAQM--PKMN 289
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 31/207 (14%)
Query: 28 LAELGDGNFGAVKRVMEERGG----------------SRKIFLDEVSVLLRVSHPNLVGL 71
L E+G G G V ++ + G +++I +D VL P +V
Sbjct: 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 72 LGFCLEKGEQLLLLEYLAN--KSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
G + + + +E + + L RM + + ++++A I +AL YL
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERI-----LGKMTVA--IVKALYYLKE 142
Query: 130 QADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG--YVDT 187
+ +IHRD+K SNILL + KL DFG+ G D R +D
Sbjct: 143 KHG--VIHRDVKPSNILLDERGQIKLCDFGIS--GRLVDDKAKDRSAGCAAYMAPERIDP 198
Query: 188 NYLNTGFVSTKSDVYSFGVLLLELITG 214
++DV+S G+ L+EL TG
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATG 225
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G + + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFAEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 21/216 (9%)
Query: 18 IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVS-HPNLVGLLGFC 75
+G GA + V A L +G AVK + ++ G SR EV L + + N++ L+ F
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 76 LEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPI 135
+ L+ E L S+ + Q + + D+A AL++LH++ I
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHI-----QKQKHFNEREASRVVRDVAAALDFLHTKG---I 132
Query: 136 IHRDIKSSNILLIDDNH---AKLADFGL---CKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
HRD+K NIL K+ DF L KL P T+ GS Y+
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 190 L-----NTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
+ F + D++S GV+L +++G G
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 33/226 (14%)
Query: 22 ATSFVYLAELGDGNFGAVKRVMEERGGSR----KIFLD------------EVSVLLRVSH 65
+ + LA++G G FG V + + G + K+ ++ E+ +L + H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARAL 124
N+V L+ C K Y K+ + + L L + + L +I R +
Sbjct: 77 ENVVNLIEICRTKAS-----PYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM 131
Query: 125 E-------YLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTS 177
+ Y+H I+HRD+K++N+L+ D KLADFGL + ++P R +
Sbjct: 132 QMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 178 IKGSFGYVDTN-YLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
+ Y L D++ G ++ E+ T +QG+
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ ++ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 22 ATSFVYLAELGDGNFGAVKRVMEERGGS----RKIFLD-----------EVSVLLRVSHP 66
++ F L +LG+G + V + + + G +++ LD E+S++ + H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 67 NLVGLLGFCLEKGEQLLLLEYLAN--KSLFDRM---HTYYGQSLGVLSWSNRLSIALDIA 121
N+V L + + L+ E++ N K D +T G L ++ + +
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKY-----FQWQLL 118
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGS 181
+ L + H I+HRD+K N+L+ KL DFGL + F P +
Sbjct: 119 QGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARA--FGIPVNTFSSEVVTLW 173
Query: 182 FGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
+ D + + ST D++S G +L E+ITG G+
Sbjct: 174 YRAPDV-LMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 88/221 (39%), Gaps = 23/221 (10%)
Query: 22 ATSFVYLAELGDGNFGAVKRVMEERGGSR----KIFLD------------EVSVLLRVSH 65
+ + LA++G G FG V + + G + K+ ++ E+ +L + H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 66 PNLVGLLGFCLEKGEQLLLLE---YLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIAR 122
N+V L+ C K + YL + L + S + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 123 ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSF 182
L Y+H I+HRD+K++N+L+ D KLADFGL + ++P R + +
Sbjct: 137 GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 183 GYVDTN-YLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
Y L D++ G ++ E+ T +QG+
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 88/221 (39%), Gaps = 23/221 (10%)
Query: 22 ATSFVYLAELGDGNFGAVKRVMEERGGSR----KIFLD------------EVSVLLRVSH 65
+ + LA++G G FG V + + G + K+ ++ E+ +L + H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 66 PNLVGLLGFCLEKGEQLLLLE---YLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIAR 122
N+V L+ C K + YL + L + S + +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 135
Query: 123 ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSF 182
L Y+H I+HRD+K++N+L+ D KLADFGL + ++P R + +
Sbjct: 136 GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 192
Query: 183 GYVDTN-YLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
Y L D++ G ++ E+ T +QG+
Sbjct: 193 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 233
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 44/191 (23%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + S +
Sbjct: 73 ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA- 176
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSI 218
TS + YV T Y L G+ D++S GV++ E+I G
Sbjct: 177 ---------GTSFMMT-PYVVTRYYRAPEVILGMGY-KENVDIWSVGVIMGEMIKGGVLF 225
Query: 219 QGSATLAEWTE 229
G+ + +W +
Sbjct: 226 PGTDHIDQWNK 236
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 33/204 (16%)
Query: 31 LGDGNFGAVKRVMEERGGSR---KIFLDEVSVLLRVSH-------PNLVGLLGFC--LEK 78
LG G G V R G + K+ D V H P++V +L +
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHH 77
Query: 79 GEQ--LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNR--LSIALDIARALEYLHSQADPP 134
G++ L+++E + LF R+ Q G +++ R I DI A+++LHS
Sbjct: 78 GKRCLLIIMECMEGGELFSRI-----QERGDQAFTEREAAEIMRDIGTAIQFLHSHN--- 129
Query: 135 IIHRDIKSSNILLID---DNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
I HRD+K N+L D KL DFG K + + QT + YV L
Sbjct: 130 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPY-YVAPEVLG 183
Query: 192 TGFVSTKSDVYSFGVLLLELITGL 215
D++S GV++ L+ G
Sbjct: 184 PEKYDKSCDMWSLGVIMYILLCGF 207
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 21/166 (12%)
Query: 56 EVSVLLRVS----HPNLVGLLG-FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSW 110
EV++L +V HP ++ LL F ++G L+L L + LFD Y G L
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFD-----YITEKGPLGE 138
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILL-IDDNHAKLADFGLCKLGPFNDP 169
+ A+++ HS+ ++HRDIK NIL+ + AKL DFG L +D
Sbjct: 139 GPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGAL--LHD- 192
Query: 170 NRPKRQTSIKGSFGYVDTNYLNT-GFVSTKSDVYSFGVLLLELITG 214
+ T G+ Y +++ + + + V+S G+LL +++ G
Sbjct: 193 ---EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 5 EELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSR--------KIF-LD 55
E+LK ++R + + LG G+FG V R+ +++ G + ++F ++
Sbjct: 58 EKLKPVDYEYREEV----HWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE 113
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ +S P +V L G E + +E L SL + + +G L L
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALY 168
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDD-NHAKLADFG--LCKLGPFNDPNRP 172
LEYLH++ I+H D+K+ N+LL D + A L DFG LC L P
Sbjct: 169 YLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALC-LQPDGLGKSL 224
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
I G+ ++ + K D++S ++L ++ G
Sbjct: 225 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ FGL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILGFGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 23/220 (10%)
Query: 23 TSFVYLAELGDGNFGAVKRVMEERGGSR----KIFLD------------EVSVLLRVSHP 66
+ + LA++G G FG V + + G + K+ ++ E+ +L + H
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 67 NLVGLLGFCLEKGEQLLLLE---YLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARA 123
N+V L+ C K + YL + L + S + +
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 124 LEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG 183
L Y+H I+HRD+K++N+L+ D KLADFGL + ++P R + +
Sbjct: 138 LYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 184 YVDTN-YLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSA 222
Y L D++ G ++ E+ T +QG+
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 44/191 (23%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + S +
Sbjct: 73 ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA- 176
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSI 218
TS + YV T Y L G+ D++S GV++ E+I G
Sbjct: 177 ---------GTSFMMT-PYVVTRYYRAPEVILGMGY-KENVDIWSVGVIMGEMIKGGVLF 225
Query: 219 QGSATLAEWTE 229
G+ + +W +
Sbjct: 226 PGTDHIDQWNK 236
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 33/204 (16%)
Query: 31 LGDGNFGAVKRVMEERGGSR---KIFLDEVSVLLRVSH-------PNLVGLLGFC--LEK 78
LG G G V R G + K+ D V H P++V +L +
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHH 96
Query: 79 GEQ--LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNR--LSIALDIARALEYLHSQADPP 134
G++ L+++E + LF R+ Q G +++ R I DI A+++LHS
Sbjct: 97 GKRCLLIIMECMEGGELFSRI-----QERGDQAFTEREAAEIMRDIGTAIQFLHSHN--- 148
Query: 135 IIHRDIKSSNILLID---DNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN 191
I HRD+K N+L D KL DFG K + + QT + YV L
Sbjct: 149 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPY-YVAPEVLG 202
Query: 192 TGFVSTKSDVYSFGVLLLELITGL 215
D++S GV++ L+ G
Sbjct: 203 PEKYDKSCDMWSLGVIMYILLCGF 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ DFGL R T + + G V
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLA------------RHTDDEMT-GXVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G + A I EY
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFXEPHARFYAAQIVLTFEY 177
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 178 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 226
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 56 EVSVLLRVSHPNLVGLL-----GFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSW 110
E+ +L + H N++GLL +E ++ L+ L L + + + LS
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS------QALSD 130
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPN 170
+ + + R L+Y+HS IIHRD+K SN+ + +D+ ++ DFGL
Sbjct: 131 EHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLA--------- 178
Query: 171 RPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
RQ + + GYV T + LN + D++S G ++ EL+ G GS
Sbjct: 179 ---RQADEEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E + V+ P
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFP 102
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + ++LEY +F + + +G S + A I EY
Sbjct: 103 FLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + K+ADFG K R K +T + G+ Y+
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 177
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 178 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 226
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ D GL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDAGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFXEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFXEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+++ + K+ DFGL K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFXEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 96
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G + A I EY
Sbjct: 97 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFXEPHARFYAAQIVLTFEY 151
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 152 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 200
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 201 APEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 149
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK-RQTSIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K R + G+ Y+
Sbjct: 150 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 198
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY +F + + +G S + A I EY
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+++ + K+ DFG K R K +T + G+ Y+
Sbjct: 158 LHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T ++ G+ Y+
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTLCGTPEYL 206
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ D GL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDRGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 87
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 88 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 142
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK-RQTSIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K R ++ G+ Y+
Sbjct: 143 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTLCGTPEYL 191
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 34/178 (19%)
Query: 56 EVSVLLRVSHPNLVGLL-----GFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSW 110
E+ +L + H N++GLL +E ++ L+ L L + + LS
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV------KCQALSD 130
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPN 170
+ + + R L+Y+HS IIHRD+K SN+ + +D+ ++ DFGL
Sbjct: 131 EHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLA--------- 178
Query: 171 RPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
RQ + + GYV T + LN + D++S G ++ EL+ G GS
Sbjct: 179 ---RQADEEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 95/233 (40%), Gaps = 58/233 (24%)
Query: 5 EELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGG----SRKIFLD----- 55
EE+ AT+ R LG G+FG V R+ +++ G +K+ L+
Sbjct: 90 EEVHWATHQLR---------------LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE 134
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLF-----------DRMHTYYGQS 104
E+ ++ P +V L G E + +E L SL DR Y GQ+
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQA 194
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDD-NHAKLADFG--LC 161
L LEYLHS+ I+H D+K+ N+LL D +HA L DFG +C
Sbjct: 195 L----------------EGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVC 235
Query: 162 KLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
L P I G+ ++ + K DV+S ++L ++ G
Sbjct: 236 -LQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 50/222 (22%)
Query: 28 LAELGDGNFGAVKRVMEERGGSR----------------KIFLDEVSVLLRVSHPNLVGL 71
L+ +G G +G+V + + G R K E+ +L + H N++GL
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 72 LGF-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L LE+ + L+ +L L + + L+ + + I R L+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV------KCQKLTDDHVQFLIYQILRGLKY 140
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS AD IIHRD+K SN+ + +D K+ D GL R T + + GYV
Sbjct: 141 IHS-AD--IIHRDLKPSNLAVNEDCELKILDGGLA------------RHTDDEMT-GYVA 184
Query: 187 TNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
T + LN + D++S G ++ EL+TG G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 5 EELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSR--------KIF-LD 55
E+LK ++R + + +G G+FG V R+ +++ G + ++F ++
Sbjct: 44 EKLKPVDYEYREEV----HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE 99
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ +S P +V L G E + +E L SL + + +G L L
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALY 154
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDD-NHAKLADFG--LCKLGPFNDPNRP 172
LEYLH++ I+H D+K+ N+LL D + A L DFG LC L P
Sbjct: 155 YLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALC-LQPDGLGKSL 210
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
I G+ ++ + K D++S ++L ++ G
Sbjct: 211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 5 EELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGGSR--------KIF-LD 55
E+LK ++R + + +G G+FG V R+ +++ G + ++F ++
Sbjct: 60 EKLKPVDYEYREEV----HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE 115
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ +S P +V L G E + +E L SL + + +G L L
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALY 170
Query: 116 IALDIARALEYLHSQADPPIIHRDIKSSNILLIDD-NHAKLADFG--LCKLGPFNDPNRP 172
LEYLH++ I+H D+K+ N+LL D + A L DFG LC L P
Sbjct: 171 YLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALC-LQPDGLGKSL 226
Query: 173 KRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
I G+ ++ + K D++S ++L ++ G
Sbjct: 227 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 95/233 (40%), Gaps = 58/233 (24%)
Query: 5 EELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVMEERGG----SRKIFLD----- 55
EE+ AT+ R LG G+FG V R+ +++ G +K+ L+
Sbjct: 71 EEVHWATHQLR---------------LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE 115
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLF-----------DRMHTYYGQS 104
E+ ++ P +V L G E + +E L SL DR Y GQ+
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQA 175
Query: 105 LGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDD-NHAKLADFG--LC 161
L LEYLHS+ I+H D+K+ N+LL D +HA L DFG +C
Sbjct: 176 L----------------EGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVC 216
Query: 162 KLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
L P I G+ ++ + K DV+S ++L ++ G
Sbjct: 217 -LQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 35/206 (16%)
Query: 30 ELGDGNFGAVKRVMEERGG---------SRKIFLDEVSVLLR-------VSHPNLVGLLG 73
ELG G F V+R ++ G ++K+ + L R + HPN+V L
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 74 FCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
E+G L+ + + LF+ + YY + ++ I A+ + H
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSE-------ADASHCIQQILEAVLHCHQMG 141
Query: 132 DPPIIHRDIKSSNILL---IDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN 188
++HRD+K N+LL + KLADFGL + G+ GY+
Sbjct: 142 ---VVHRDLKPENLLLASKLKGAAVKLADFGLA----IEVEGEQQAWFGFAGTPGYLSPE 194
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITG 214
L D+++ GV+L L+ G
Sbjct: 195 VLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 25/156 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+A +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCK 162
LHS +I+RD+K N+L+ + ++ DFG K
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR------------KIFLD----EVSVLLRVSHPN 67
++V +G G +G+V +++R G + +IF E+ +L + H N
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS-IALDIARALEY 126
++GLL L + + M T + +G+ ++ + + + L+Y
Sbjct: 85 VIGLLDVFTPASS---LRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKY 141
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS ++HRD+K N+ + +D K+ DFGL R + + GYV
Sbjct: 142 IHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA------------RHADAEMT-GYVV 185
Query: 187 TNYLNTGFV-------STKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
T + V + D++S G ++ E++TG +G L + T+
Sbjct: 186 TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR------------KIFLD----EVSVLLRVSHPN 67
++V +G G +G+V +++R G + +IF E+ +L + H N
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 68 LVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS-IALDIARALEY 126
++GLL L + + M T + +G+ ++ + + + L+Y
Sbjct: 103 VIGLLDVFTPASS---LRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKY 159
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVD 186
+HS ++HRD+K N+ + +D K+ DFGL R + + GYV
Sbjct: 160 IHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA------------RHADAEMT-GYVV 203
Query: 187 TNYLNTGFV-------STKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
T + V + D++S G ++ E++TG +G L + T+
Sbjct: 204 TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ 253
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 44/191 (23%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + S +
Sbjct: 73 ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA- 176
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSI 218
TS + YV T Y L G+ D++S G ++ E+I G
Sbjct: 177 ---------GTSFMMT-PYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLF 225
Query: 219 QGSATLAEWTE 229
G+ + +W +
Sbjct: 226 PGTDHIDQWNK 236
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 50 RKIFLDEVSVLLRV-SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMH---------- 98
R+ + E+ VL + +H N+V LLG C G L++ EY L + +
Sbjct: 86 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 145
Query: 99 ---TYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKL 155
L + LS + +A+ + +L S+ IHRD+ + NILL K+
Sbjct: 146 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKI 202
Query: 156 ADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
DFGL + ND N + + + ++ + + +SDV+S+G+ L EL +
Sbjct: 203 CDFGLAR-DIKNDSNYVVKGNA-RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+++ + K+ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 44/191 (23%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + S +
Sbjct: 73 ELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA- 176
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSI 218
TS + YV T Y L G+ D++S G ++ E+I G
Sbjct: 177 ---------GTSFMMT-PYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLF 225
Query: 219 QGSATLAEWTE 229
G+ + +W +
Sbjct: 226 PGTDHIDQWNK 236
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 50 RKIFLDEVSVLLRV-SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMH---------- 98
R+ + E+ VL + +H N+V LLG C G L++ EY L + +
Sbjct: 70 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 129
Query: 99 ---TYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKL 155
L + LS + +A+ + +L S+ IHRD+ + NILL K+
Sbjct: 130 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKI 186
Query: 156 ADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
DFGL + ND N + + + ++ + + +SDV+S+G+ L EL +
Sbjct: 187 CDFGLAR-DIKNDSNYVVKGNA-RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+++ + ++ DFGL K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 34/178 (19%)
Query: 56 EVSVLLRVSHPNLVGLL-----GFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSW 110
E+ +L + H N++GLL +E ++ L+ L L + + LS
Sbjct: 69 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV------KCQALSD 122
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPN 170
+ + + R L+Y+HS IIHRD+K SN+ + +D ++ DFGL
Sbjct: 123 EHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLA--------- 170
Query: 171 RPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGS 221
RQ + + GYV T + LN + D++S G ++ EL+ G GS
Sbjct: 171 ---RQADEEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 224
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 35/206 (16%)
Query: 30 ELGDGNFGAVKRVMEERGG---------SRKIFLDEVSVLLR-------VSHPNLVGLLG 73
ELG G F V+R M+ G ++K+ + L R + HPN+V L
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 74 FCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
E+G L+ + + LF+ + YY + ++ I ++ + H
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSE-------ADASHCIQQILESVNHCHLNG 123
Query: 132 DPPIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN 188
I+HRD+K N+LL + KLADFGL + G+ GY+
Sbjct: 124 ---IVHRDLKPENLLLASKSKGAAVKLADFGLA----IEVQGDQQAWFGFAGTPGYLSPE 176
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITG 214
L D+++ GV+L L+ G
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 33/212 (15%)
Query: 30 ELGDGNFGAVKRVMEERGGS----------------RKIFLDEVSVL-LRVSHPNLVGLL 72
ELG G F V++ + + G R L E++VL L S P ++ L
Sbjct: 36 ELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95
Query: 73 GFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQAD 132
E +L+LEY A +F + ++S ++ + + I + YLH
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAE---MVSENDVIRLIKQILEGVYYLHQNN- 151
Query: 133 PPIIHRDIKSSNILLIDD---NHAKLADFGLC-KLGPFNDPNRPKRQTSIKGSFGYVDTN 188
I+H D+K NILL K+ DFG+ K+G I G+ Y+
Sbjct: 152 --IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG------HACELREIMGTPEYLAPE 203
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITGLKSIQG 220
LN ++T +D+++ G++ L+T G
Sbjct: 204 ILNYDPITTATDMWNIGIIAYMLLTHTSPFVG 235
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 50 RKIFLDEVSVLLRV-SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMH---------- 98
R+ + E+ VL + +H N+V LLG C G L++ EY L + +
Sbjct: 88 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 147
Query: 99 ---TYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKL 155
L + LS + +A+ + +L S+ IHRD+ + NILL K+
Sbjct: 148 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKI 204
Query: 156 ADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
DFGL + ND N + + + ++ + + +SDV+S+G+ L EL +
Sbjct: 205 CDFGLAR-DIKNDSNYVVKGNA-RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 50 RKIFLDEVSVLLRV-SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMH---------- 98
R+ + E+ VL + +H N+V LLG C G L++ EY L + +
Sbjct: 93 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 152
Query: 99 ---TYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKL 155
L + LS + +A+ + +L S+ IHRD+ + NILL K+
Sbjct: 153 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKI 209
Query: 156 ADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
DFGL + ND N + + + ++ + + +SDV+S+G+ L EL +
Sbjct: 210 CDFGLARHIK-NDSNYVVKGNA-RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 43/209 (20%)
Query: 30 ELGDGNFGAVKRVMEE-------------RGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
+LG G FG V R +E +G + + E+S+L H N++ L
Sbjct: 12 DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFE 71
Query: 77 EKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPII 136
E +++ E+++ +F+R++T S L+ +S + AL++LHS I
Sbjct: 72 SMEELVMIFEFISGLDIFERINT----SAFELNEREIVSYVHQVCEALQFLHSH---NIG 124
Query: 137 HRDIKSSNILLIDDNHA--KLADFGLCK-LGP-------FNDPNRPKRQTSIKGSFGYVD 186
H DI+ NI+ + K+ +FG + L P F P Y
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE-------------YYA 171
Query: 187 TNYLNTGFVSTKSDVYSFGVLLLELITGL 215
VST +D++S G L+ L++G+
Sbjct: 172 PEVHQHDVVSTATDMWSLGTLVYVLLSGI 200
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 50 RKIFLDEVSVLLRV-SHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMH---------- 98
R+ + E+ VL + +H N+V LLG C G L++ EY L + +
Sbjct: 93 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 152
Query: 99 ---TYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKL 155
L + LS + +A+ + +L S+ IHRD+ + NILL K+
Sbjct: 153 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKI 209
Query: 156 ADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELIT 213
DFGL + ND N + + + ++ + + +SDV+S+G+ L EL +
Sbjct: 210 CDFGLAR-DIKNDSNYVVKGNA-RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 44/191 (23%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + S +
Sbjct: 73 ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA- 176
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSI 218
TS + YV T Y L G+ D++S G ++ E+I G
Sbjct: 177 ---------GTSFMMT-PYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLF 225
Query: 219 QGSATLAEWTE 229
G+ + +W +
Sbjct: 226 PGTDHIDQWNK 236
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 35/206 (16%)
Query: 30 ELGDGNFGAVKRVMEERGG---------SRKIFLDEVSVLLR-------VSHPNLVGLLG 73
ELG G F V+R M+ G ++K+ + L R + HPN+V L
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 74 FCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
E+G L+ + + LF+ + YY + ++ I ++ + H
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSE-------ADASHCIQQILESVNHCHLNG 123
Query: 132 DPPIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN 188
I+HRD+K N+LL + KLADFGL + G+ GY+
Sbjct: 124 ---IVHRDLKPENLLLASKSKGAAVKLADFGLA----IEVQGDQQAWFGFAGTPGYLSPE 176
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITG 214
L D+++ GV+L L+ G
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 20/187 (10%)
Query: 34 GNFGAVKRVMEERGGSRKI--FLDEVSVLLRVSHPNLVGLLGFCLEK--GEQLLLLEYLA 89
GN VK + +RK F +E L SHPN++ +LG C L+ +
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 90 NKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLID 149
SL++ +H G + V+ S + ALD AR +LH+ P+I R +S + ID
Sbjct: 93 YGSLYNVLHE--GTNF-VVDQSQAVKFALDXARGXAFLHTLE--PLIPRHALNSRSVXID 147
Query: 150 DNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVST---KSDVYSFGV 206
++ K F P R + +V L T +D +SF V
Sbjct: 148 EDXTARISXADVKFS-FQSPGR-------XYAPAWVAPEALQKKPEDTNRRSADXWSFAV 199
Query: 207 LLLELIT 213
LL EL+T
Sbjct: 200 LLWELVT 206
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V + G+ KI L+E +L V+ P
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G + A I EY
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFXEPHARFYAAQIVLTFEY 149
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPK-RQTSIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K R + G+ Y+
Sbjct: 150 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 198
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 44/191 (23%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + S +
Sbjct: 73 ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQ 120
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA- 176
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSI 218
TS + YV T Y L G+ D++S G ++ E+I G
Sbjct: 177 ---------GTSFMMT-PYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLF 225
Query: 219 QGSATLAEWTE 229
G+ + +W +
Sbjct: 226 PGTDHIDQWNK 236
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSN 112
F + S++ ++SH +LV G C+ E +L+ E++ F + TY ++ ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVK----FGSLDTYLKKNKNCINILW 114
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPN-- 170
+L +A +A A+ +L +IH ++ + NILLI + K + KL +DP
Sbjct: 115 KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL---SDPGIS 168
Query: 171 ---RPKRQTSIKGSFGYVDTNYL-NTGFVSTKSDVYSFGVLLLELITG 214
PK ++ +V + N ++ +D +SFG L E+ +G
Sbjct: 169 ITVLPK--DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 109/264 (41%), Gaps = 44/264 (16%)
Query: 4 LEELKMATNDFRI--RIGVGATSFVYLAELGDGNFGAVKRVMEE---------RGGSRKI 52
++E ND+RI + G + + L E D F A+K+ + + + KI
Sbjct: 23 VKEKDKYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKI 81
Query: 53 --------FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQS 104
F +E+ ++ + + + G E ++ EY+ N S+ + +
Sbjct: 82 SIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILK-----FDEY 136
Query: 105 LGVLSWSNRLSIALDIAR--------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLA 156
VL + I + + + + Y+H++ + I HRD+K SNIL+ + KL+
Sbjct: 137 FFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLS 194
Query: 157 DFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLN--TGFVSTKSDVYSFGVLLLELITG 214
DFG + K+ +G++ ++ + + + + K D++S G+ L +
Sbjct: 195 DFGESEYMV------DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYN 248
Query: 215 LKSIQGSATLAEWTEECRRNKNVE 238
+ +L E R KN+E
Sbjct: 249 VVPFSLKISLVELFNNI-RTKNIE 271
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 35/206 (16%)
Query: 30 ELGDGNFGAVKRVMEERG---------GSRKIFLDEVSVLLR-------VSHPNLVGLLG 73
ELG G F V+R +++ ++K+ + L R + HPN+V L
Sbjct: 38 ELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 97
Query: 74 FCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
E+G L+ + + LF+ + YY ++ + I ++ ++H Q
Sbjct: 98 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEA-------DASHCIHQILESVNHIH-QH 149
Query: 132 DPPIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN 188
D I+HRD+K N+LL KLADFGL + G+ GY+
Sbjct: 150 D--IVHRDLKPENLLLASKCKGAAVKLADFGLA----IEVQGEQQAWFGFAGTPGYLSPE 203
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITG 214
L D+++ GV+L L+ G
Sbjct: 204 VLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 51 KIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSW 110
K F EV + H N+V +G C+ ++ ++L+ + + VL
Sbjct: 74 KAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLY----SVVRDAKIVLDV 129
Query: 111 SNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPN 170
+ IA +I + + YLH++ I+H+D+KS N+ D+ + DFGL +
Sbjct: 130 NKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAG 185
Query: 171 RPKRQTSIKGSFGYV-------------DTNYLNTGFVSTKSDVYSFGVLLLEL 211
R R+ ++ G++ DT F S SDV++ G + EL
Sbjct: 186 R--REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPF-SKHSDVFALGTIWYEL 236
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 34/217 (15%)
Query: 22 ATSFVYLAELGDGNFGAV--KRVMEERGGSRKIFLDEVSVLLR---------VSHPNLVG 70
A + ++G G +G V + E+ + F E + R + H N++G
Sbjct: 36 AKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILG 95
Query: 71 LLGFCLE---KGEQLLLL-EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
+ ++ QL L+ +Y N SL+D + + L + L +A L +
Sbjct: 96 FIAADIKGTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCH 149
Query: 127 LHS-----QADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIK-G 180
LH+ Q P I HRD+KS NIL+ + +AD GL + +D N + + G
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISDTNEVDIPPNTRVG 208
Query: 181 SFGYVDTNYLNTGFVSTK------SDVYSFGVLLLEL 211
+ Y+ L+ +D+YSFG++L E+
Sbjct: 209 TKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 53 FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSN 112
F + S++ ++SH +LV G C E +L+ E++ F + TY ++ ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVK----FGSLDTYLKKNKNCINILW 114
Query: 113 RLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPN-- 170
+L +A +A A+ +L +IH ++ + NILLI + K + KL +DP
Sbjct: 115 KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL---SDPGIS 168
Query: 171 ---RPKRQTSIKGSFGYVDTNYL-NTGFVSTKSDVYSFGVLLLELITG 214
PK ++ +V + N ++ +D +SFG L E+ +G
Sbjct: 169 ITVLPK--DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY +F + + +G S + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+++ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 83/206 (40%), Gaps = 35/206 (16%)
Query: 30 ELGDGNFGAVKRVMEERGG---------SRKIFLDEVSVLLR-------VSHPNLVGLLG 73
ELG G F V+R ++ G ++K+ + L R + HPN+V L
Sbjct: 18 ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 74 FCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
E+G L+ + + LF+ + YY + ++ I A+ + H
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVAREYYSE-------ADASHCIQQILEAVLHCHQMG 130
Query: 132 DPPIIHRDIKSSNILL---IDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTN 188
++HR++K N+LL + KLADFGL + G+ GY+
Sbjct: 131 ---VVHRNLKPENLLLASKLKGAAVKLADFGLA----IEVEGEQQAWFGFAGTPGYLSPE 183
Query: 189 YLNTGFVSTKSDVYSFGVLLLELITG 214
L D+++ GV+L L+ G
Sbjct: 184 VLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L L + +++EY +F + + +G S + A I EY
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+++ + K+ DFG K R K +T + G+ Y+
Sbjct: 158 LHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L L + +++EY +F + + +G S + A I EY
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+++ + K+ DFG K R K +T + G+ Y+
Sbjct: 158 LHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFXEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFXEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY+ +F + + +G + A I EY
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFXEPHARFYAAQIVLTFEY 157
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+L+ + ++ DFG K R K +T + G+ Y+
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
LV L + +++EY +F + + +G + A I EY
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFXEPHARFYAAQIVLTFEY 156
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+++ + K+ DFG K R K +T + G+ Y+
Sbjct: 157 LHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 44/191 (23%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + +
Sbjct: 74 ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQ 121
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 122 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA- 177
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSI 218
TS + YV T Y L G+ D++S G ++ E+I G
Sbjct: 178 ---------GTSFMMT-PYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLF 226
Query: 219 QGSATLAEWTE 229
G+ + +W +
Sbjct: 227 PGTDHIDQWNK 237
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 44/191 (23%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA- 176
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSI 218
TS + YV T Y L G+ D++S G ++ E+I G
Sbjct: 177 ---------GTSFMMT-PYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLF 225
Query: 219 QGSATLAEWTE 229
G+ + +W +
Sbjct: 226 PGTDHIDQWNK 236
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 17 RIGVGATSFVYLAELGDGN-FGAVKRVM--EERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
+IG G V+ A+ + + A+KRV ++ G L E+ +L + H N+V L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L ++L L+ ++ L Y+ G L S + + L + HS+
Sbjct: 69 V-LHSDKKLTLVFEFCDQDL----KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN-- 121
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
++HRD+K N+L+ + KLADFGL + F P R + + D +
Sbjct: 122 -VLHRDLKPQNLLINRNGELKLADFGLARA--FGIPVRCYSAEVVTLWYRPPDVLF-GAK 177
Query: 194 FVSTKSDVYSFGVLLLELITGLKSI 218
ST D++S G + EL + +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 36/209 (17%)
Query: 31 LGDGNFGAVKR-VMEERGGSRKIF--LDEVS----------VLLRVSHPNLVGLLGFCL- 76
+G G +G V R + + KIF DE S VLLR H N++G + +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLR--HDNILGFIASDMT 73
Query: 77 --EKGEQLLLL-EYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLH----- 128
QL L+ Y + SL+D + L L +A+ A L +LH
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFLQR------QTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 129 SQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP-----FNDPNRPKRQTSIKGSFG 183
+Q P I HRD KS N+L+ + +AD GL + + N P+ T +
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 184 YVDTNYLNTGFVSTK-SDVYSFGVLLLEL 211
+D F S K +D+++FG++L E+
Sbjct: 188 VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 33/229 (14%)
Query: 28 LAELGDGNFGAVKRVMEERGGSRKIFLD--------------EVSVLLRVSHPNLVGLLG 73
+ ++G GNFG V R+M ++ + + + E+ + HPN+V
Sbjct: 24 VKDIGAGNFG-VARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L +++EY + LF+R+ + G S + + Y H+
Sbjct: 83 VILTPTHLAIVMEYASGGELFERI-----CNAGRFSEDEARFFFQQLISGVSYAHAMQ-- 135
Query: 134 PIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY- 189
+ HRD+K N LL D + A K+ADFG K + ++PK S G+ Y+
Sbjct: 136 -VAHRDLKLENTLL-DGSPAPRLKIADFGYSKASVLH--SQPK---SAVGTPAYIAPEVL 188
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
L + +DV+S GV L ++ G + + + R NV+
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ 237
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 44/191 (23%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA- 176
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSI 218
TS + YV T Y L G+ D++S G ++ E+I G
Sbjct: 177 ---------GTSFMMT-PYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLF 225
Query: 219 QGSATLAEWTE 229
G+ + +W +
Sbjct: 226 PGTDHIDQWNK 236
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 44/191 (23%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + +
Sbjct: 75 ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQ 122
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLG- 164
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 123 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 179
Query: 165 ------PFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSI 218
PF R R + GY + D++S G ++ E+I G
Sbjct: 180 TSFMMVPFVV-TRYYRAPEVILGMGYKEN-----------VDIWSVGCIMGEMIKGGVLF 227
Query: 219 QGSATLAEWTE 229
G+ + +W +
Sbjct: 228 PGTDHIDQWNK 238
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 27/205 (13%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNR 113
E+ +L +++HP ++ + F + + ++LE + LFD++ + ++ L +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLI---DDNHAKLADFGLCKLGPFNDPN 170
L A++YLH IIHRD+K N+LL +D K+ DFG K+
Sbjct: 124 L-------LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 171 RPKRQTSIKGSFGYVDTNYL---NTGFVSTKSDVYSFGVLLLELITGLKSI---QGSATL 224
R ++ G+ Y+ L T + D +S GV+L ++G + +L
Sbjct: 174 R-----TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
Query: 225 AEWTEECRRNKNVEVWAQMLDPKLN 249
+ + N EVWA++ + L+
Sbjct: 229 KDQITSGKYNFIPEVWAEVSEKALD 253
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 27/205 (13%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNR 113
E+ +L +++HP ++ + F + + ++LE + LFD++ + ++ L +
Sbjct: 71 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLI---DDNHAKLADFGLCKLGPFNDPN 170
L A++YLH IIHRD+K N+LL +D K+ DFG K+
Sbjct: 130 L-------LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 179
Query: 171 RPKRQTSIKGSFGYVDTNYL---NTGFVSTKSDVYSFGVLLLELITGLKSI---QGSATL 224
R ++ G+ Y+ L T + D +S GV+L ++G + +L
Sbjct: 180 R-----TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 234
Query: 225 AEWTEECRRNKNVEVWAQMLDPKLN 249
+ + N EVWA++ + L+
Sbjct: 235 KDQITSGKYNFIPEVWAEVSEKALD 259
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 27/205 (13%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNR 113
E+ +L +++HP ++ + F + + ++LE + LFD++ + ++ L +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLI---DDNHAKLADFGLCKLGPFNDPN 170
L A++YLH IIHRD+K N+LL +D K+ DFG K+
Sbjct: 124 L-------LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 171 RPKRQTSIKGSFGYVDTNYL---NTGFVSTKSDVYSFGVLLLELITGLKSI---QGSATL 224
R ++ G+ Y+ L T + D +S GV+L ++G + +L
Sbjct: 174 R-----TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
Query: 225 AEWTEECRRNKNVEVWAQMLDPKLN 249
+ + N EVWA++ + L+
Sbjct: 229 KDQITSGKYNFIPEVWAEVSEKALD 253
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 27/205 (13%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNR 113
E+ +L +++HP ++ + F + + ++LE + LFD++ + ++ L +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLI---DDNHAKLADFGLCKLGPFNDPN 170
L A++YLH IIHRD+K N+LL +D K+ DFG K+
Sbjct: 124 L-------LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 171 RPKRQTSIKGSFGYVDTNYL---NTGFVSTKSDVYSFGVLLLELITGLKSI---QGSATL 224
R ++ G+ Y+ L T + D +S GV+L ++G + +L
Sbjct: 174 R-----TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
Query: 225 AEWTEECRRNKNVEVWAQMLDPKLN 249
+ + N EVWA++ + L+
Sbjct: 229 KDQITSGKYNFIPEVWAEVSEKALD 253
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 27/205 (13%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNR 113
E+ +L +++HP ++ + F + + ++LE + LFD++ + ++ L +
Sbjct: 64 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLI---DDNHAKLADFGLCKLGPFNDPN 170
L A++YLH IIHRD+K N+LL +D K+ DFG K+
Sbjct: 123 L-------LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 172
Query: 171 RPKRQTSIKGSFGYVDTNYL---NTGFVSTKSDVYSFGVLLLELITGLKSI---QGSATL 224
R ++ G+ Y+ L T + D +S GV+L ++G + +L
Sbjct: 173 R-----TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 227
Query: 225 AEWTEECRRNKNVEVWAQMLDPKLN 249
+ + N EVWA++ + L+
Sbjct: 228 KDQITSGKYNFIPEVWAEVSEKALD 252
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 25/162 (15%)
Query: 14 FRIRIGVGATSFVYLAELGDG---NFGAVK---RVMEERGGSRKIFLDEVSVLLRVSHPN 67
+ IR +G S+ ++ E D A+K RV E+ ++I L E+++L R++H +
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRI-LREIAILNRLNHDH 113
Query: 68 LVGLLGFCL----EKGEQLLLLEYLAN---KSLFDRMHTYYGQSLGVLSWSNRLSIALDI 120
+V +L + EK ++L ++ +A+ K LF R Y L+ + ++ ++
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLF-RTPVY-------LTELHIKTLLYNL 165
Query: 121 ARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCK 162
++Y+HS I+HRD+K +N L+ D K+ DFGL +
Sbjct: 166 LVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLA 225
+ P+ T + + L G+ D++S G ++ E+I G G+ +
Sbjct: 178 TSFMMTPEVVTRYYRAPEVI----LGMGY-KENVDIWSVGCIMGEMIKGGVLFPGTDHID 232
Query: 226 EWTE 229
+W +
Sbjct: 233 QWNK 236
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 27/141 (19%)
Query: 79 GEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHR 138
G+ L LL +K D Y G+ + +A+D L Y +HR
Sbjct: 159 GDLLTLLSKFEDKLPEDMARFYIGE----------MVLAIDSIHQLHY---------VHR 199
Query: 139 DIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNT-----G 193
DIK N+LL + H +LADFG C ND + ++ G+ Y+ L G
Sbjct: 200 DIKPDNVLLDVNGHIRLADFGSCL--KMNDDGTVQSSVAV-GTPDYISPEILQAMEDGMG 256
Query: 194 FVSTKSDVYSFGVLLLELITG 214
+ D +S GV + E++ G
Sbjct: 257 KYGPECDWWSLGVCMYEMLYG 277
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 27/205 (13%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNR 113
E+ +L +++HP ++ + F + + ++LE + LFD++ + ++ L +
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 114 LSIALDIARALEYLHSQADPPIIHRDIKSSNILLI---DDNHAKLADFGLCKLGPFNDPN 170
L A++YLH IIHRD+K N+LL +D K+ DFG K+
Sbjct: 263 L-------LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 312
Query: 171 RPKRQTSIKGSFGYVDTNYL---NTGFVSTKSDVYSFGVLLLELITGLKSI---QGSATL 224
R ++ G+ Y+ L T + D +S GV+L ++G + +L
Sbjct: 313 R-----TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 367
Query: 225 AEWTEECRRNKNVEVWAQMLDPKLN 249
+ + N EVWA++ + L+
Sbjct: 368 KDQITSGKYNFIPEVWAEVSEKALD 392
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 33/229 (14%)
Query: 28 LAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVS--------------HPNLVGLLG 73
+ ++G GNFG V R+M ++ + + + + +++ HPN+V
Sbjct: 24 VKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKE 82
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L +++EY + LF+R+ + G S + + Y H+
Sbjct: 83 VILTPTHLAIVMEYASGGELFERI-----CNAGRFSEDEARFFFQQLISGVSYCHAMQ-- 135
Query: 134 PIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY- 189
+ HRD+K N LL D + A K+ DFG K + ++PK S G+ Y+
Sbjct: 136 -VCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLH--SQPK---STVGTPAYIAPEVL 188
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
L + +DV+S GV L ++ G + + + R NV+
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ 237
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 27/141 (19%)
Query: 79 GEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHR 138
G+ L LL +K D Y G+ + +A+D L Y +HR
Sbjct: 175 GDLLTLLSKFEDKLPEDMARFYIGE----------MVLAIDSIHQLHY---------VHR 215
Query: 139 DIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNT-----G 193
DIK N+LL + H +LADFG C ND + ++ G+ Y+ L G
Sbjct: 216 DIKPDNVLLDVNGHIRLADFGSCL--KMNDDGTVQSSVAV-GTPDYISPEILQAMEDGMG 272
Query: 194 FVSTKSDVYSFGVLLLELITG 214
+ D +S GV + E++ G
Sbjct: 273 KYGPECDWWSLGVCMYEMLYG 293
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 35/209 (16%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ +L +++HP ++ + F + + ++LE + LFD++ +G + RL
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKV-------VG----NKRLK 237
Query: 116 IA------LDIARALEYLHSQADPPIIHRDIKSSNILLI---DDNHAKLADFGLCKLGPF 166
A + A++YLH IIHRD+K N+LL +D K+ DFG K+
Sbjct: 238 EATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 294
Query: 167 NDPNRPKRQTSIKGSFGYVDTNYL---NTGFVSTKSDVYSFGVLLLELITGLKSI---QG 220
R ++ G+ Y+ L T + D +S GV+L ++G +
Sbjct: 295 TSLMR-----TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349
Query: 221 SATLAEWTEECRRNKNVEVWAQMLDPKLN 249
+L + + N EVWA++ + L+
Sbjct: 350 QVSLKDQITSGKYNFIPEVWAEVSEKALD 378
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 51/234 (21%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLG--------- 106
EV ++ ++ HPN+ L ++ L++E L D+++ + S G
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 107 ----------------------VLSWSNRLSIALDIAR----ALEYLHSQADPPIIHRDI 140
L + R + +I R AL YLH+Q I HRDI
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDI 194
Query: 141 KSSNILLIDDN--HAKLADFGLCKLGPFNDPNRPKR--QTSIKGSFGYVDTNYLNTGFVS 196
K N L + KL DFGL K F N + T+ G+ +V LNT S
Sbjct: 195 KPENFLFSTNKSFEIKLVDFGLSK--EFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES 252
Query: 197 --TKSDVYSFGVLLLELITG---LKSIQGSATLAEWTEE--CRRNKNVEVWAQM 243
K D +S GVLL L+ G + + T+++ + C N N V + +
Sbjct: 253 YGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPL 306
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQ--LLLLEYLANKSLFD--RMHTYYGQSLGVLSWS 111
E+++L + HPN++ L L ++ LL +Y A L+ + H + +
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDY-AEHDLWHIIKFHRASKANKKPVQLP 126
Query: 112 NRL--SIALDIARALEYLHSQADPPIIHRDIKSSNILLI----DDNHAKLADFGLCKLGP 165
+ S+ I + YLH+ ++HRD+K +NIL++ + K+AD G +L
Sbjct: 127 RGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARL-- 181
Query: 166 FNDPNRPKRQ-TSIKGSFGYVDTNYLNTGFVSTKS-DVYSFGVLLLELITG 214
FN P +P + +F Y L TK+ D+++ G + EL+T
Sbjct: 182 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 11 TNDFRIR--IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIF----LDEVSVLLRV 63
++DF+++ +G GA V A G A+K++ + +F L E+ +L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI---EPFDKPLFALRTLREIKILKHF 66
Query: 64 SHPNLVGLLGF----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALD 119
H N++ + E ++ +++ L L + T +LS +
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST------QMLSDDHIQYFIYQ 120
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL--GPFNDPNRPKRQTS 177
RA++ LH +IHRD+K SN+L+ + K+ DFGL ++ D + P Q S
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 178 IKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLEL 211
G YV T + L + S DV+S G +L EL
Sbjct: 178 --GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 18 IGVGATSFVYLAELGDGNFG-AVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCL 76
+G G V+ A D + A+K+++ S K L E+ ++ R+ H N+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 77 EKGEQLL-----LLEYLANKSLFDRMHTYYGQSL--GVLSWSNRLSIALDIARALEYLHS 129
G QL L E + + + M T L G L + + R L+Y+HS
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS 138
Query: 130 QADPPIIHRDIKSSNILL-IDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKG--SFGYVD 186
++HRD+K +N+ + +D K+ DFGL ++ DP+ S KG S G V
Sbjct: 139 AN---VLHRDLKPANLFINTEDLVLKIGDFGLARI---MDPH-----YSHKGHLSEGLVT 187
Query: 187 TNY------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAE 226
Y L+ + D+++ G + E++TG G+ L +
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ 233
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 33/248 (13%)
Query: 4 LEELKMATNDFRIRIGVGATSFVYLAELGDGNFGAVKRVME-------------ERGGS- 49
++ + T + I + + ++ ++G GNFG V R+M ERG +
Sbjct: 1 MDRAPVTTGPLDMPIMHDSDRYDFVKDIGSGNFG-VARLMRDKLTKELVAVKYIERGAAI 59
Query: 50 RKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLS 109
+ E+ + HPN+V L +++EY + L++R+ + G S
Sbjct: 60 DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI-----CNAGRFS 114
Query: 110 WSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPF 166
+ + Y HS I HRD+K N LL D + A K+ DFG K
Sbjct: 115 EDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVL 170
Query: 167 NDPNRPKRQTSIKGSFGYVDTNY-LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLA 225
+ ++PK S G+ Y+ L + +DV+S GV L ++ G +
Sbjct: 171 H--SQPK---STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR 225
Query: 226 EWTEECRR 233
++ + +R
Sbjct: 226 DYRKTIQR 233
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 34/160 (21%)
Query: 18 IGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLD---------EVSVLLRVSHPNL 68
+G GA FV+ A + N V + +++ +++ E+++L RV H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 69 VGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS---------IALD 119
+ +L + N+ F + +G L + ++ +R I
Sbjct: 92 IKVL-------------DIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFG 159
+ A+ YL + IIHRDIK NI++ +D KL DFG
Sbjct: 139 LVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFG 175
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 34/209 (16%)
Query: 24 SFVYLAELGDGNFGAVKRVMEERGGSR---KIF--------------LDEVSVLLRVSHP 66
F + LG G+FG V V G+ KI L+E +L V+ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 67 NLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEY 126
L L + +++EY +F + + +G + A I EY
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFXEPHARFYAAQIVLTFEY 157
Query: 127 LHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQT-SIKGSFGYV 185
LHS +I+RD+K N+++ + K+ DFG K R K +T + G+ Y+
Sbjct: 158 LHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 186 DTNYLNTGFVSTKSDVYSFGVLLLELITG 214
+ + + D ++ GVL+ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 20/195 (10%)
Query: 38 AVKRVMEERGGSRKIFLDEVSVLLRVS-HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDR 96
AVK + ++ G R EV +L + H N++ L+ F E+ L+ E + S+
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 97 MHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---A 153
+H + L S + D+A AL++LH++ I HRD+K NIL N
Sbjct: 102 IHKR--RHFNELEAS---VVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPV 153
Query: 154 KLADFGL---CKLGPFNDPNRPKRQTSIKGSFGYVDTNYL-----NTGFVSTKSDVYSFG 205
K+ DFGL KL P + GS Y+ + + D++S G
Sbjct: 154 KICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLG 213
Query: 206 VLLLELITGLKSIQG 220
V+L L++G G
Sbjct: 214 VILYILLSGYPPFVG 228
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 93/229 (40%), Gaps = 33/229 (14%)
Query: 28 LAELGDGNFGAVKRVMEERGGSRKIFLD--------------EVSVLLRVSHPNLVGLLG 73
+ ++G GNFG V R+M ++ + + + E+ + HPN+V
Sbjct: 23 VKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKE 81
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L +++EY + LF+R+ + G S + + Y H+
Sbjct: 82 VILTPTHLAIVMEYASGGELFERI-----CNAGRFSEDEARFFFQQLISGVSYCHAMQ-- 134
Query: 134 PIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY- 189
+ HRD+K N LL D + A K+ DFG K + ++PK S G+ Y+
Sbjct: 135 -VCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLH--SQPK---STVGTPAYIAPEVL 187
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
L + +DV+S GV L ++ G + + + R NV+
Sbjct: 188 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ 236
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 11 TNDFRIR--IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIF----LDEVSVLLRV 63
++DF+++ +G GA V A G A+K++ + +F L E+ +L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI---EPFDKPLFALRTLREIKILKHF 66
Query: 64 SHPNLVGLLGF----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALD 119
H N++ + E ++ +++ L L + T +LS +
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST------QMLSDDHIQYFIYQ 120
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL--GPFNDPNRPKRQTS 177
RA++ LH +IHRD+K SN+L+ + K+ DFGL ++ D + P Q S
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 178 IKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLEL 211
G +V T + L + S DV+S G +L EL
Sbjct: 178 --GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 4 LEELKMATNDFRI--RIGVGATSFVYLAELGDGNFGAVKRVMEE----RGGSRKIFLDEV 57
L+E+++ +DF I IG GA S V + ++ ++M + + G F +E
Sbjct: 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREER 112
Query: 58 SVLLRVSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSI 116
VL+ + L F + L L++EY L + + +G+ + + R +
Sbjct: 113 DVLVNGDR-RWITQLHFAFQDENYLYLVMEYYVGGDLLTLL-SKFGER--IPAEMARFYL 168
Query: 117 ALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLC 161
A +I A++ +H +HRDIK NILL H +LADFG C
Sbjct: 169 A-EIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSC 209
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 1 TYALEELKMATNDFRI--RIGVGATSFVYLAELGDGNFGAVKRVMEE----RGGSRKIFL 54
T ++++++ DF I IG GA V + +L + + +++ + + F
Sbjct: 63 TSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFR 122
Query: 55 DEVSVLLRVSHPNLVGLLGFCLEKGEQL-LLLEYLANKSLFDRMHTYYGQSLGVLS--WS 111
+E VL+ + L + + L L+++Y L + + + ++ +
Sbjct: 123 EERDVLVN-GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYL 181
Query: 112 NRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNR 171
+ IA+D L Y +HRDIK NIL+ + H +LADFG C L D
Sbjct: 182 AEMVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSC-LKLMEDGT- 230
Query: 172 PKRQTSIK-GSFGYVDTNYLNT-----GFVSTKSDVYSFGVLLLELITG 214
Q+S+ G+ Y+ L G + D +S GV + E++ G
Sbjct: 231 --VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 17 RIGVGATSFVYLAELGDGN-FGAVKRVM--EERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
+IG G V+ A+ + + A+KRV ++ G L E+ +L + H N+V L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L ++L L+ ++ L Y+ G L S + + L + HS+
Sbjct: 69 V-LHSDKKLTLVFEFCDQDL----KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN-- 121
Query: 134 PIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTG 193
++HRD+K N+L+ + KLA+FGL + F P R + + D +
Sbjct: 122 -VLHRDLKPQNLLINRNGELKLANFGLARA--FGIPVRCYSAEVVTLWYRPPDVLF-GAK 177
Query: 194 FVSTKSDVYSFGVLLLEL 211
ST D++S G + EL
Sbjct: 178 LYSTSIDMWSAGCIFAEL 195
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 17/153 (11%)
Query: 18 IGVGATSFVYLAELGDGN----FGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG G+ +VYLA + N V R+ E+ ++I L E+++L R+ ++ L
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRI-LREITILNRLKSDYIIRLHD 94
Query: 74 FCLE----KGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHS 129
+ K ++L ++ +A+ L T L+ + +I ++ +++H
Sbjct: 95 LIIPEDLLKFDELYIVLEIADSDLKKLFKTPI-----FLTEQHVKTILYNLLLGEKFIHE 149
Query: 130 QADPPIIHRDIKSSNILLIDDNHAKLADFGLCK 162
IIHRD+K +N LL D K+ DFGL +
Sbjct: 150 SG---IIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 42/229 (18%)
Query: 32 GDGNFGAVKRVMEERGGS----RKIFLD------EVSVLLRVS---HPNLVGLLGFCLEK 78
G G FG V+ E+ G +K+ D E+ ++ ++ HPN+V L +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTL 91
Query: 79 GEQ-------LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQA 131
GE+ +++EY+ + +L YY + + ++ + + R++ LH +
Sbjct: 92 GERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFL-FQLIRSIGCLHLPS 149
Query: 132 DPPIIHRDIKSSNILLID-DNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY- 189
+ HRDIK N+L+ + D KL DFG K ++PN Y+ + Y
Sbjct: 150 VN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN-----------VAYICSRYY 197
Query: 190 ------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECR 232
+T D++S G + E++ G +G + + E R
Sbjct: 198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 30/184 (16%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLA 225
+ P+ T + + L G+ D++S G ++ E++ G +
Sbjct: 178 TSFMMEPEVVTRYYRAPEVI----LGMGY-KENVDIWSVGCIMGEMVCHKILFPGRDYID 232
Query: 226 EWTE 229
+W +
Sbjct: 233 QWNK 236
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLN 90
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQAD 132
Q L E+ + + M Q + + R+S L + +++LHS
Sbjct: 91 VF---TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG- 146
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY--- 189
IIHRD+K SNI++ D K+ DFGL + TS + YV T Y
Sbjct: 147 --IIHRDLKPSNIVVKSDXTLKILDFGLARTA----------GTSFMMT-PYVVTRYYRA 193
Query: 190 ----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
L G+ D++S G ++ E++ G + +W +
Sbjct: 194 PEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 22/205 (10%)
Query: 18 IGVGATSFVY-LAELGDGNFGAVKRVMEERGGSR--KIFLDEVSVLLRVSHPNLVGLLGF 74
IG GA S V +L G+ A K + ++ +R + E + + H N+V L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 75 CLEKGEQLLLLEYLANKSLFDRM--HTYYGQSLGVLSWSNRLSIALDIARALEYLHSQAD 132
E+G L+ + + LF+ + YY ++ + I A+ + H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEA-------DASHCIQQILEAVLHCHQMG- 123
Query: 133 PPIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY 189
++HRD+K N+LL KLADFGL + G+ GY+
Sbjct: 124 --VVHRDLKPENLLLASKCKGAAVKLADFGL----AIEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 190 LNTGFVSTKSDVYSFGVLLLELITG 214
L D+++ GV+L L+ G
Sbjct: 178 LRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 137 HRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFG---YVDTNYLNTG 193
HRD+K NIL+ D+ A L DFG+ ++ T + + G Y +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASA------TTDEKLTQLGNTVGTLYYXAPERFSES 210
Query: 194 FVSTKSDVYSFGVLLLELITGLKSIQG 220
+ ++D+Y+ +L E +TG QG
Sbjct: 211 HATYRADIYALTCVLYECLTGSPPYQG 237
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 19/101 (18%)
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLC---KLGPFNDPNRPKRQT 176
I LE+LH + II+RD+K N+LL DD + +++D GL K G QT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG----------QT 344
Query: 177 SIK---GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
K G+ G++ L D ++ GV L E+I
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 14/136 (10%)
Query: 38 AVKRVMEERGGSRKI-----------FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLE 86
A+KRV R + L E+ +L HPN++GL + E +
Sbjct: 50 AIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKL 109
Query: 87 YLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNIL 146
YL + + + V+S + I L LH ++HRD+ NIL
Sbjct: 110 YLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNIL 166
Query: 147 LIDDNHAKLADFGLCK 162
L D+N + DF L +
Sbjct: 167 LADNNDITICDFNLAR 182
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 20/195 (10%)
Query: 38 AVKRVMEERGGSRKIFLDEVSVLLRVS-HPNLVGLLGFCLEKGEQLLLLEYLANKSLFDR 96
AVK + ++ G R EV +L + H N++ L+ F E+ L+ E + S+
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 97 MHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNH---A 153
+H + L S + D+A AL++LH++ I HRD+K NIL N
Sbjct: 102 IHKR--RHFNELEAS---VVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPV 153
Query: 154 KLADFGL---CKLGPFNDPNRPKRQTSIKGSFGYVDTNYL-----NTGFVSTKSDVYSFG 205
K+ DF L KL P + GS Y+ + + D++S G
Sbjct: 154 KICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLG 213
Query: 206 VLLLELITGLKSIQG 220
V+L L++G G
Sbjct: 214 VILYILLSGYPPFVG 228
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 19/101 (18%)
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLC---KLGPFNDPNRPKRQT 176
I LE+LH + II+RD+K N+LL DD + +++D GL K G QT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG----------QT 344
Query: 177 SIK---GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
K G+ G++ L D ++ GV L E+I
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 14/136 (10%)
Query: 38 AVKRVMEERGGSRKI-----------FLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLE 86
A+KRV R + L E+ +L HPN++GL + E +
Sbjct: 50 AIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKL 109
Query: 87 YLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNIL 146
YL + + + V+S + I L LH ++HRD+ NIL
Sbjct: 110 YLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNIL 166
Query: 147 LIDDNHAKLADFGLCK 162
L D+N + DF L +
Sbjct: 167 LADNNDITICDFNLAR 182
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 19/101 (18%)
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLC---KLGPFNDPNRPKRQT 176
I LE+LH + II+RD+K N+LL DD + +++D GL K G QT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG----------QT 344
Query: 177 SIK---GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
K G+ G++ L D ++ GV L E+I
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 19/101 (18%)
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLC---KLGPFNDPNRPKRQT 176
I LE+LH + II+RD+K N+LL DD + +++D GL K G QT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG----------QT 344
Query: 177 SIK---GSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITG 214
K G+ G++ L D ++ GV L E+I
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 11 TNDFRIR--IGVGATSFVYLA-ELGDGNFGAVKRVMEERGGSRKIF----LDEVSVLLRV 63
++DF+++ +G GA V A G A+K++ + +F L E+ +L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI---EPFDKPLFALRTLREIKILKHF 66
Query: 64 SHPNLVGLLGF----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALD 119
H N++ + E ++ +++ L L + T +LS +
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST------QMLSDDHIQYFIYQ 120
Query: 120 IARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKL--GPFNDPNRPKRQTS 177
RA++ LH +IHRD+K SN+L+ + K+ DFGL ++ D + P Q S
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 178 IKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLEL 211
G V T + L + S DV+S G +L EL
Sbjct: 178 --GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 44/191 (23%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + +
Sbjct: 78 ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQ 125
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 126 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA- 181
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSI 218
TS + YV T Y L G+ D++S G ++ E++
Sbjct: 182 ---------GTSFMMT-PYVVTRYYRAPEVILGMGY-KENVDLWSVGCIMGEMVCHKILF 230
Query: 219 QGSATLAEWTE 229
G + +W +
Sbjct: 231 PGRDYIDQWNK 241
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 44/191 (23%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + +
Sbjct: 67 ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQ 114
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 115 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA- 170
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNY-------LNTGFVSTKSDVYSFGVLLLELITGLKSI 218
TS + YV T Y L G+ D++S G ++ E++
Sbjct: 171 ---------GTSFMMT-PYVVTRYYRAPEVILGMGY-KENVDLWSVGCIMGEMVCHKILF 219
Query: 219 QGSATLAEWTE 229
G + +W +
Sbjct: 220 PGRDYIDQWNK 230
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 33/229 (14%)
Query: 28 LAELGDGNFGAVKRVMEERGGSRKIFLD--------------EVSVLLRVSHPNLVGLLG 73
+ ++G GNFG V R+M ++ + + + E+ + HPN+V
Sbjct: 24 VKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L +++EY + LF+R+ + G S + + Y H+
Sbjct: 83 VILTPTHLAIVMEYASGGELFERI-----CNAGRFSEDEARFFFQQLISGVSYCHAMQ-- 135
Query: 134 PIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY- 189
+ HRD+K N LL D + A K+ FG K + ++PK S G+ Y+
Sbjct: 136 -VCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLH--SQPK---STVGTPAYIAPEVL 188
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
L + +DV+S GV L ++ G + + + R NV+
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ 237
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 30/184 (16%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS 115
E+ ++ V+H N++GLL + KSL + Y L + +
Sbjct: 73 ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 116 IALDIAR----------ALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGP 165
+ LD R +++LHS IIHRD+K SNI++ D K+ DFGL +
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLA 225
+ P+ T + + L G+ D++S G ++ E++ G +
Sbjct: 178 TSFMMEPEVVTRYYRAPEVI----LGMGY-KENVDLWSVGCIMGEMVCHKILFPGRDYID 232
Query: 226 EWTE 229
+W +
Sbjct: 233 QWNK 236
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 41/229 (17%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 83
Query: 74 F-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYL 127
LE+ + + L+ L + +L Q + + R+S L + +++L
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMDANL--------XQVIQMELDHERMSYLLYQMLXGIKHL 135
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
HS IIHRD+K SNI++ D K+ DFGL + TS + YV T
Sbjct: 136 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA----------GTSFMMT-PYVVT 181
Query: 188 NY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
Y L G+ D++S G ++ E++ G + +W +
Sbjct: 182 RYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 90
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQAD 132
Q L E+ + + M Q + + R+S L + +++LHS
Sbjct: 91 VF---TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG- 146
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY--- 189
IIHRD+K SNI++ D K+ DFGL + TS + YV T Y
Sbjct: 147 --IIHRDLKPSNIVVKSDXTLKILDFGLARTA----------GTSFMMT-PYVVTRYYRA 193
Query: 190 ----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
L G+ D++S G ++ E++ G + +W +
Sbjct: 194 PEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 41/229 (17%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLN 90
Query: 74 F-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYL 127
LE+ + + L+ L + +L Q + + R+S L + +++L
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANL--------XQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
HS IIHRD+K SNI++ D K+ DFGL + TS + YV T
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA----------GTSFMMT-PYVVT 188
Query: 188 NY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
Y L G+ D++S G ++ E++ G + +W +
Sbjct: 189 RYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 82 LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS--IALDIARALEYLHSQADPPIIHRD 139
L+++E L LF R+ Q G +++ R + I I A++YLHS I HRD
Sbjct: 105 LIVMECLDGGELFSRI-----QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRD 156
Query: 140 IKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
+K N+L KL DFG K + T+ + YV L
Sbjct: 157 VKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKYD 211
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLA 225
D++S GV++ L+ G + LA
Sbjct: 212 KSCDMWSLGVIMYILLCGYPPFYSNHGLA 240
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 81/203 (39%), Gaps = 34/203 (16%)
Query: 56 EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSL----FDRMHTYYGQSLGVLSWS 111
E S+ + HP++V LL G ++ E++ L R + S V S
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 112 NRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHA---KLADFGLC-KLGPFN 167
R I AL Y H D IIHRD+K N+LL ++ KL DFG+ +LG
Sbjct: 136 MR-----QILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--- 184
Query: 168 DPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKS------DVYSFGVLLLELITGLKSIQGS 221
+ G G V T + V + DV+ GV+L L++G G+
Sbjct: 185 ------ESGLVAG--GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236
Query: 222 AT-LAEWTEECRRNKNVEVWAQM 243
L E + + N W+ +
Sbjct: 237 KERLFEGIIKGKYKMNPRQWSHI 259
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 82 LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS--IALDIARALEYLHSQADPPIIHRD 139
L+++E L LF R+ Q G +++ R + I I A++YLHS I HRD
Sbjct: 95 LIVMECLDGGELFSRI-----QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRD 146
Query: 140 IKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
+K N+L KL DFG K + T+ + YV L
Sbjct: 147 VKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKYD 201
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLA 225
D++S GV++ L+ G + LA
Sbjct: 202 KSCDMWSLGVIMYILLCGYPPFYSNHGLA 230
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 82 LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS--IALDIARALEYLHSQADPPIIHRD 139
L+++E L LF R+ Q G +++ R + I I A++YLHS I HRD
Sbjct: 96 LIVMECLDGGELFSRI-----QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRD 147
Query: 140 IKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
+K N+L KL DFG K + T+ + YV L
Sbjct: 148 VKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKYD 202
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLA 225
D++S GV++ L+ G + LA
Sbjct: 203 KSCDMWSLGVIMYILLCGYPPFYSNHGLA 231
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 82 LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS--IALDIARALEYLHSQADPPIIHRD 139
L+++E L LF R+ Q G +++ R + I I A++YLHS I HRD
Sbjct: 97 LIVMECLDGGELFSRI-----QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRD 148
Query: 140 IKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
+K N+L KL DFG K + T+ + YV L
Sbjct: 149 VKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKYD 203
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLA 225
D++S GV++ L+ G + LA
Sbjct: 204 KSCDMWSLGVIMYILLCGYPPFYSNHGLA 232
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 82 LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS--IALDIARALEYLHSQADPPIIHRD 139
L+++E L LF R+ Q G +++ R + I I A++YLHS I HRD
Sbjct: 91 LIVMECLDGGELFSRI-----QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRD 142
Query: 140 IKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
+K N+L KL DFG K + T+ + YV L
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKYD 197
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLA 225
D++S GV++ L+ G + LA
Sbjct: 198 KSCDMWSLGVIMYILLCGYPPFYSNHGLA 226
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 82 LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS--IALDIARALEYLHSQADPPIIHRD 139
L+++E L LF R+ Q G +++ R + I I A++YLHS I HRD
Sbjct: 90 LIVMECLDGGELFSRI-----QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRD 141
Query: 140 IKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
+K N+L KL DFG K + T+ + YV L
Sbjct: 142 VKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKYD 196
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLA 225
D++S GV++ L+ G + LA
Sbjct: 197 KSCDMWSLGVIMYILLCGYPPFYSNHGLA 225
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 82 LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS--IALDIARALEYLHSQADPPIIHRD 139
L+++E L LF R+ Q G +++ R + I I A++YLHS I HRD
Sbjct: 89 LIVMECLDGGELFSRI-----QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRD 140
Query: 140 IKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
+K N+L KL DFG K + T+ + YV L
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKYD 195
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLA 225
D++S GV++ L+ G + LA
Sbjct: 196 KSCDMWSLGVIMYILLCGYPPFYSNHGLA 224
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 41/229 (17%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLN 90
Query: 74 F-----CLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYL 127
LE+ + + L+ L + +L Q + + R+S L + +++L
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANL--------CQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDT 187
HS IIHRD+K SNI++ D K+ DFGL + TS + YV T
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA----------GTSFMMT-PYVVT 188
Query: 188 NY-------LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
Y L G+ D++S G ++ E++ G + +W +
Sbjct: 189 RYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 18 IGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVS-HPNLVGLLGFCL 76
+G G++ V G AVKR++ + I L E+ +L HPN++ +C
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNVIRY--YCS 77
Query: 77 EKGEQLLLLEY-LANKSLFDRMHT--YYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
E ++ L + L N +L D + + ++L + N +S+ IA + +LHS
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-- 135
Query: 134 PIIHRDIKSSNILLIDDNHAK-------------LADFGLCK 162
IIHRD+K NIL+ + ++DFGLCK
Sbjct: 136 -IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 5 EELKMATNDFRI--RIGVGATSFVYLA----ELGDGNFGAVKRVMEERGGSRKIFLDEVS 58
E + +N F+I +IG G S VYLA ++G A+K ++ R E+
Sbjct: 14 EAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIR--IAAELQ 71
Query: 59 VLLRVSHPNLVGLLGFCLEKGEQLLL-LEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIA 117
L + V + +C K + +++ + YL ++S D +++ LS+
Sbjct: 72 CLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS--------LSFQEVREYM 123
Query: 118 LDIARALEYLHSQADPPIIHRDIKSSNILLIDD-NHAKLADFGLCK 162
L++ +AL+ +H I+HRD+K SN L L DFGL +
Sbjct: 124 LNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 18 IGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVS-HPNLVGLLGFCL 76
+G G++ V G AVKR++ + I L E+ +L HPN++ +C
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNVIRY--YCS 95
Query: 77 EKGEQLLLLEY-LANKSLFDRMHT--YYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
E ++ L + L N +L D + + ++L + N +S+ IA + +LHS
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-- 153
Query: 134 PIIHRDIKSSNILLIDDNHAK-------------LADFGLCK 162
IIHRD+K NIL+ + ++DFGLCK
Sbjct: 154 -IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 18 IGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVS-HPNLVGLLGFCL 76
+G G++ V G AVKR++ + I L E+ +L HPN++ +C
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNVIRY--YCS 95
Query: 77 EKGEQLLLLEY-LANKSLFDRMHT--YYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
E ++ L + L N +L D + + ++L + N +S+ IA + +LHS
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-- 153
Query: 134 PIIHRDIKSSNILLIDDNHAK-------------LADFGLCK 162
IIHRD+K NIL+ + ++DFGLCK
Sbjct: 154 -IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 82 LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS--IALDIARALEYLHSQADPPIIHRD 139
L+++E L LF R+ Q G +++ R + I I A++YLHS I HRD
Sbjct: 91 LIVMECLDGGELFSRI-----QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRD 142
Query: 140 IKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
+K N+L KL DFG K + T+ + YV L
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKYD 197
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLA 225
D++S GV++ L+ G + LA
Sbjct: 198 KSCDMWSLGVIMYILLCGYPPFYSNHGLA 226
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 18 IGVGATSFVYLAELGDGNFGAVKRVMEERGGSRKIFLDEVSVLLRVS-HPNLVGLLGFCL 76
+G G++ V G AVKR++ + I L E+ +L HPN++ +C
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNVIRY--YCS 77
Query: 77 EKGEQLLLLEY-LANKSLFDRMHT--YYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
E ++ L + L N +L D + + ++L + N +S+ IA + +LHS
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-- 135
Query: 134 PIIHRDIKSSNILLIDDNHAK-------------LADFGLCK 162
IIHRD+K NIL+ + ++DFGLCK
Sbjct: 136 -IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 21/142 (14%)
Query: 23 TSFVYLAELGDGNFGAVKRVMEERGG-------SRKIF---LDEVSVLLRV-------SH 65
T F L ++G G FG+V + ++ G S+K +DE + L V H
Sbjct: 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH 70
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
++V E L+ EY SL D + Y + + + + L + R L
Sbjct: 71 SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY-RIMSYFKEAELKDLLLQVGRGLR 129
Query: 126 YLHSQADPPIIHRDIKSSNILL 147
Y+HS + ++H DIK SNI +
Sbjct: 130 YIHSMS---LVHMDIKPSNIFI 148
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 21/142 (14%)
Query: 23 TSFVYLAELGDGNFGAVKRVMEERGG-------SRKIF---LDEVSVLLRV-------SH 65
T F L ++G G FG+V + ++ G S+K +DE + L V H
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH 68
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
++V E L+ EY SL D + Y + + + + L + R L
Sbjct: 69 SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY-RIMSYFKEAELKDLLLQVGRGLR 127
Query: 126 YLHSQADPPIIHRDIKSSNILL 147
Y+HS + ++H DIK SNI +
Sbjct: 128 YIHSMS---LVHMDIKPSNIFI 146
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 21/142 (14%)
Query: 23 TSFVYLAELGDGNFGAVKRVMEERGG-------SRKIF---LDEVSVLLRV-------SH 65
T F L ++G G FG+V + ++ G S+K +DE + L V H
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH 68
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
++V E L+ EY SL D + Y + + + + L + R L
Sbjct: 69 SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY-RIMSYFKEAELKDLLLQVGRGLR 127
Query: 126 YLHSQADPPIIHRDIKSSNILL 147
Y+HS + ++H DIK SNI +
Sbjct: 128 YIHSMS---LVHMDIKPSNIFI 146
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 82 LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS--IALDIARALEYLHSQADPPIIHRD 139
L+++E L LF R+ Q G +++ R + I I A++YLHS I HRD
Sbjct: 141 LIVMECLDGGELFSRI-----QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRD 192
Query: 140 IKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
+K N+L KL DFG K + T+ + YV L
Sbjct: 193 VKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKYD 247
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLA 225
D++S GV++ L+ G + LA
Sbjct: 248 KSCDMWSLGVIMYILLCGYPPFYSNHGLA 276
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 21/142 (14%)
Query: 23 TSFVYLAELGDGNFGAVKRVMEERGG-------SRKIF---LDEVSVLLRV-------SH 65
T F L ++G G FG+V + ++ G S+K +DE + L V H
Sbjct: 7 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH 66
Query: 66 PNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALE 125
++V E L+ EY SL D + Y + + + + L + R L
Sbjct: 67 SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY-RIMSYFKEAELKDLLLQVGRGLR 125
Query: 126 YLHSQADPPIIHRDIKSSNILL 147
Y+HS + ++H DIK SNI +
Sbjct: 126 YIHSMS---LVHMDIKPSNIFI 144
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 18/149 (12%)
Query: 82 LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS--IALDIARALEYLHSQADPPIIHRD 139
L+++E L LF R+ Q G +++ R + I I A++YLHS I HRD
Sbjct: 135 LIVMECLDGGELFSRI-----QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRD 186
Query: 140 IKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
+K N+L KL DFG K + T+ + YV L
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKYD 241
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLA 225
D++S GV++ L+ G + LA
Sbjct: 242 KSCDMWSLGVIMYILLCGYPPFYSNHGLA 270
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 18/149 (12%)
Query: 82 LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS--IALDIARALEYLHSQADPPIIHRD 139
L+++E L LF R+ Q G +++ R + I I A++YLHS I HRD
Sbjct: 89 LIVMECLDGGELFSRI-----QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRD 140
Query: 140 IKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVS 196
+K N+L KL DFG K + T + YV L
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTEPCYTPYYVAPEVLGPEKYD 195
Query: 197 TKSDVYSFGVLLLELITGLKSIQGSATLA 225
D++S GV++ L+ G + LA
Sbjct: 196 KSCDMWSLGVIMYILLCGYPPFYSNHGLA 224
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 84
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQAD 132
Q L E+ + + M Q + + R+S L + +++LHS
Sbjct: 85 VF---TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 140
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY--- 189
IIHRD+K SNI++ D K+ DFGL + TS + YV T Y
Sbjct: 141 --IIHRDLKPSNIVVKSDCTLKILDFGLARTA----------GTSFMMT-PYVVTRYYRA 187
Query: 190 ----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
L G+ D++S G ++ E++ G + +W +
Sbjct: 188 PEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 83
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQAD 132
Q L E+ + + M Q + + R+S L + +++LHS
Sbjct: 84 VF---TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 139
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY--- 189
IIHRD+K SNI++ D K+ DFGL + TS + YV T Y
Sbjct: 140 --IIHRDLKPSNIVVKSDCTLKILDFGLARTA----------GTSFMMT-PYVVTRYYRA 186
Query: 190 ----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
L G+ D++S G ++ E++ G + +W +
Sbjct: 187 PEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 84
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQAD 132
Q L E+ + + M Q + + R+S L + +++LHS
Sbjct: 85 VF---TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 140
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY--- 189
IIHRD+K SNI++ D K+ DFGL + TS + YV T Y
Sbjct: 141 --IIHRDLKPSNIVVKSDCTLKILDFGLARTA----------GTSFMMT-PYVVTRYYRA 187
Query: 190 ----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
L G+ D++S G ++ E++ G + +W +
Sbjct: 188 PEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 89
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQAD 132
Q L E+ + + M Q + + R+S L + +++LHS
Sbjct: 90 VF---TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 145
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY--- 189
IIHRD+K SNI++ D K+ DFGL + TS + YV T Y
Sbjct: 146 --IIHRDLKPSNIVVKSDCTLKILDFGLARTA----------GTSFMMT-PYVVTRYYRA 192
Query: 190 ----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
L G+ D++S G ++ E++ G + +W +
Sbjct: 193 PEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 235
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 90
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQAD 132
Q L E+ + + M Q + + R+S L + +++LHS
Sbjct: 91 VF---TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY--- 189
IIHRD+K SNI++ D K+ DFGL + TS + YV T Y
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLARTA----------GTSFMMT-PYVVTRYYRA 193
Query: 190 ----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
L G+ D++S G ++ E++ G + +W +
Sbjct: 194 PEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 90
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQAD 132
Q L E+ + + M Q + + R+S L + +++LHS
Sbjct: 91 VF---TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY--- 189
IIHRD+K SNI++ D K+ DFGL + TS + YV T Y
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLARTA----------GTSFMMT-PYVVTRYYRA 193
Query: 190 ----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
L G+ D++S G ++ E++ G + +W +
Sbjct: 194 PEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCK 162
R L+Y+HS +IHRD+K SN+L+ ++ K+ DFG+ +
Sbjct: 170 RGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 91
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQAD 132
Q L E+ + + M Q + + R+S L + +++LHS
Sbjct: 92 VF---TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 147
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY--- 189
IIHRD+K SNI++ D K+ DFGL + TS + YV T Y
Sbjct: 148 --IIHRDLKPSNIVVKSDCTLKILDFGLARTA----------GTSFMMT-PYVVTRYYRA 194
Query: 190 ----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
L G+ D++S G ++ E++ G + +W +
Sbjct: 195 PEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 91
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQAD 132
Q L E+ + + M Q + + R+S L + +++LHS
Sbjct: 92 VF---TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 147
Query: 133 PPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY--- 189
IIHRD+K SNI++ D K+ DFGL + TS + YV T Y
Sbjct: 148 --IIHRDLKPSNIVVKSDCTLKILDFGLARTA----------GTSFMMT-PYVVTRYYRA 194
Query: 190 ----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
L G+ D++S G ++ E++ G + +W +
Sbjct: 195 PEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 91/229 (39%), Gaps = 33/229 (14%)
Query: 28 LAELGDGNFGAVKRVMEERGGSRKIFLD--------------EVSVLLRVSHPNLVGLLG 73
+ ++G GNFG V R+M ++ + + + E+ + HPN+V
Sbjct: 24 VKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 74 FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYLHSQADP 133
L +++EY + LF+R+ + G S + + Y H+
Sbjct: 83 VILTPTHLAIVMEYASGGELFERI-----CNAGRFSEDEARFFFQQLISGVSYCHAMQ-- 135
Query: 134 PIIHRDIKSSNILLIDDNHA---KLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY- 189
+ HRD+K N LL D + A K+ FG K + ++PK G+ Y+
Sbjct: 136 -VCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLH--SQPKDTV---GTPAYIAPEVL 188
Query: 190 LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTEECRRNKNVE 238
L + +DV+S GV L ++ G + + + R NV+
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ 237
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 122 RALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCK 162
R L+Y+HS +IHRD+K SN+L+ ++ K+ DFG+ +
Sbjct: 169 RGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 128
Query: 74 -FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQA 131
F +K + YL + + M Q + + R+S L + +++LHS
Sbjct: 129 VFTPQKTLEEFQDVYL----VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG 184
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY-- 189
IIHRD+K SNI++ D K+ DFGL + TS + YV T Y
Sbjct: 185 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----------GTSFMMT-PYVVTRYYR 230
Query: 190 -----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
L G+ D++S G ++ E++ G + +W +
Sbjct: 231 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 18 IGVGATSFVYLAELGDGN------FGAVKRVMEERGGSRKIFLDEVSVLLRVSHPNLVGL 71
IG G+ +VYLA D N V R+ E+ ++I L E+++L R+ ++ L
Sbjct: 34 IGRGSYGYVYLA--YDKNTEKNVAIKKVNRMFEDLIDCKRI-LREITILNRLKSDYIIRL 90
Query: 72 LGFCLE----KGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIALDIARALEYL 127
+ K ++L ++ +A+ L T L+ + +I ++ ++
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI-----FLTEEHIKTILYNLLLGENFI 145
Query: 128 HSQADPPIIHRDIKSSNILLIDDNHAKLADFGLCK 162
H IIHRD+K +N LL D K+ DFGL +
Sbjct: 146 HESG---IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 18 IGVGATSFVYLA--ELGDGNFGAVK--RVMEERGGSRKIFLDEVSVLLRVSHPNLVGLLG 73
IG GA V A + D N K R + + +++ + E+ ++ V+H N++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 128
Query: 74 -FCLEKGEQLLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLSIAL-DIARALEYLHSQA 131
F +K + YL + + M Q + + R+S L + +++LHS
Sbjct: 129 VFTPQKTLEEFQDVYL----VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG 184
Query: 132 DPPIIHRDIKSSNILLIDDNHAKLADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNY-- 189
IIHRD+K SNI++ D K+ DFGL + TS + YV T Y
Sbjct: 185 ---IIHRDLKPSNIVVKSDCTLKILDFGLARTA----------GTSFMMT-PYVVTRYYR 230
Query: 190 -----LNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLAEWTE 229
L G+ D++S G ++ E++ G + +W +
Sbjct: 231 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 106 GVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILL--IDDNHAKLADFGLCKL 163
G S L + + + LEY+H +H DIK++N+LL + + LAD+GL
Sbjct: 146 GTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVYLADYGLSYR 202
Query: 164 GPFNDPNRPKRQTSIKGSFGYVDTNYLNTG---FVSTKSDVYSFGVLLLELITG 214
N ++ ++ KG G ++ L+ +S +SDV G +L + G
Sbjct: 203 YCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCG 256
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 21/192 (10%)
Query: 34 GNFGAVKRV-MEERGGSRKIFLD-EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANK 91
G + V+R+ +E FL E+ V +HPN+V + E ++ ++A
Sbjct: 36 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 95
Query: 92 SLFDRMHTYYGQSLGVLSWSNRLSIAL---DIARALEYLHSQADPPIIHRDIKSSNILLI 148
S D + T++ + N L+IA + +AL+Y+H +HR +K+S+IL+
Sbjct: 96 SAKDLICTHFMDGM------NELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILIS 146
Query: 149 DDNHAKL----ADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGF--VSTKSDVY 202
D L ++ + G + S+K ++ L KSD+Y
Sbjct: 147 VDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVK-VLPWLSPEVLQQNLQGYDAKSDIY 205
Query: 203 SFGVLLLELITG 214
S G+ EL G
Sbjct: 206 SVGITACELANG 217
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 21/192 (10%)
Query: 34 GNFGAVKRV-MEERGGSRKIFLD-EVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANK 91
G + V+R+ +E FL E+ V +HPN+V + E ++ ++A
Sbjct: 52 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 111
Query: 92 SLFDRMHTYYGQSLGVLSWSNRLSIAL---DIARALEYLHSQADPPIIHRDIKSSNILLI 148
S D + T++ + N L+IA + +AL+Y+H +HR +K+S+IL+
Sbjct: 112 SAKDLICTHFMDGM------NELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILIS 162
Query: 149 DDNHAKL----ADFGLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGF--VSTKSDVY 202
D L ++ + G + S+K ++ L KSD+Y
Sbjct: 163 VDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVK-VLPWLSPEVLQQNLQGYDAKSDIY 221
Query: 203 SFGVLLLELITG 214
S G+ EL G
Sbjct: 222 SVGITACELANG 233
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 103/281 (36%), Gaps = 70/281 (24%)
Query: 3 ALEELKMATNDFRIRIGVGATS---FVYLAELGDGNFG--------------AVKRVM-- 43
LE + ATS + + +LG+G +G A+KR+
Sbjct: 11 TLEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE 70
Query: 44 EERGGSRKIFLDEVSVLLRVSHPNLVGLLGFCLEKGEQLLLLEYLANKSLFDRMHTYYGQ 103
E G + EVS+L + H N++ L L+ EY N L M
Sbjct: 71 HEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDV 129
Query: 104 SLGVLSWSNRLSIALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHA-----KLADF 158
S+ V+ S + + + HS+ +HRD+K N+LL + + K+ DF
Sbjct: 130 SMRVIK-----SFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDF 181
Query: 159 GLCKLGPFNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSI 218
GL + +FG + + ++ + E++ G +
Sbjct: 182 GLAR------------------AFGIPIRQFTH--------EIITLWYRPPEILLGSRHY 215
Query: 219 QGSATLAEWTEECRRNKNVEVWAQML--DPKLNGDANMEQL 257
S + W+ C +WA+ML P GD+ ++QL
Sbjct: 216 STSVDI--WSIAC-------IWAEMLMKTPLFPGDSEIDQL 247
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 74/180 (41%), Gaps = 23/180 (12%)
Query: 56 EVSVLLRVSH-PNLVGLLGFC--LEKGEQLLLL--EYLANKSLFDRMHTYYGQSLGVLSW 110
EV + R S P++V ++ L G + LL+ E L LF R+ Q G ++
Sbjct: 104 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRI-----QDRGDQAF 158
Query: 111 SNRLS--IALDIARALEYLHSQADPPIIHRDIKSSNILLIDDNHA---KLADFGLCKLGP 165
+ R + I I A++YLHS I HRD+K N+L KL DFG K
Sbjct: 159 TEREASEIXKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 166 FNDPNRPKRQTSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELITGLKSIQGSATLA 225
++ T+ + YV L D +S GV+ L+ G + LA
Sbjct: 216 SHN-----SLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLA 270
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 119 DIARALEYLHSQADPPIIHRDIKSSNILLIDDNHAKLA--DFGLCKL-GPFNDPNRPKRQ 175
+I +AL+Y HS I+HRD+K N+ LID H KL D+GL + P + N
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNV-LIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 194
Query: 176 TSIKGSFGYVDTNYLNTGFVSTKSDVYSFGVLLLELI 212
KG VD + D++S G +L +I
Sbjct: 195 RYFKGPELLVDYQMYDYSL-----DMWSLGCMLASMI 226
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 82 LLLLEYLANKSLFDRMHTYYGQSLGVLSWSNRLS--IALDIARALEYLHSQADPPIIHRD 139
L+++E L LF R+ Q G +++ R + I I A++YLHS I HRD
Sbjct: 91 LIVMECLDGGELFSRI-----QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRD 142
Query: 140 IKSSNILLIDDNHA---KLADFGLCK 162
+K N+L KL DFG K
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAK 168
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,944,198
Number of Sequences: 62578
Number of extensions: 325572
Number of successful extensions: 3137
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 822
Number of HSP's gapped (non-prelim): 1118
length of query: 266
length of database: 14,973,337
effective HSP length: 97
effective length of query: 169
effective length of database: 8,903,271
effective search space: 1504652799
effective search space used: 1504652799
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)