BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047025
(85 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q97BG9|DNAJ_THEVO Chaperone protein DnaJ OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=dnaJ PE=3 SV=1
Length = 365
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
Query: 1 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
M DYYKILGVDRNAS +D+KKA+ ++A KW+PD +PDNK EAE K + EAYE++SD
Sbjct: 1 MAKDYYKILGVDRNASEEDIKKAFRELAKKWHPDLHPDNKAEAEEKFKEISEAYEVLSDP 60
Query: 61 VRCKL--QKGPRLNPYGGIQGLKWD 83
+ ++ Q G ++ GG WD
Sbjct: 61 EKRRIYDQTG-SVDFGGGGSNFNWD 84
>sp|Q9HJ83|DNAJ_THEAC Chaperone protein DnaJ OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=dnaJ PE=3 SV=1
Length = 365
Score = 82.4 bits (202), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
M DYYKILGVDRNA+ +++KKA+ ++A KW+PD +P+NK+EAE K + EAYE++SD
Sbjct: 1 MAKDYYKILGVDRNATDEEIKKAFRELAKKWHPDLHPENKQEAEEKFKEISEAYEVLSDP 60
Query: 61 VRCKLQKGPRLNPYG-GIQGLKWD 83
+ ++ +G G Q WD
Sbjct: 61 QKRRMYDQTGTVDFGAGGQNFNWD 84
>sp|Q5FWN8|DNJ6A_XENLA DnaJ homolog subfamily B member 6-A OS=Xenopus laevis GN=dnajb6-a
PE=2 SV=1
Length = 250
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 3 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
+YY++LGV RNAS DD+KKAY ++A KW+PDK PDNK EAE + V EAYE++SD
Sbjct: 2 VEYYEVLGVQRNASADDIKKAYRRLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDS 59
>sp|Q0III6|DNJB6_BOVIN DnaJ homolog subfamily B member 6 OS=Bos taurus GN=DNAJB6 PE=2
SV=1
Length = 242
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 47/57 (82%)
Query: 3 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV R+AS +D+KKAY K+A KW+PDK P+NK+EAE K +V EAYE++SD
Sbjct: 2 VDYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSD 58
>sp|Q4R7Y5|DNJB6_MACFA DnaJ homolog subfamily B member 6 OS=Macaca fascicularis
GN=DNAJB6 PE=2 SV=1
Length = 241
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 47/57 (82%)
Query: 3 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV R+AS +D+KKAY K+A KW+PDK P+NK+EAE K +V EAYE++SD
Sbjct: 2 VDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSD 58
>sp|Q5XGU5|DNJ6B_XENLA DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-b
PE=2 SV=1
Length = 245
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 3 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
+YY +LGV RN+S DD+KKAY ++A KW+PDK PDNK+EAE + V EAYE++SD
Sbjct: 2 VEYYDVLGVQRNSSPDDIKKAYRRLALKWHPDKNPDNKEEAERRFKEVAEAYEVLSDS 59
>sp|Q5F3Z5|DNJB6_CHICK DnaJ homolog subfamily B member 6 OS=Gallus gallus GN=DNAJB6 PE=2
SV=1
Length = 326
Score = 79.0 bits (193), Expect = 7e-15, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 47/56 (83%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV ++AS +D+KKAY K+A KW+PDK P+NK+EAE + +V EAYE++SD
Sbjct: 3 DYYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPENKEEAEQQFKQVAEAYEVLSD 58
>sp|Q6P642|DNJB6_XENTR DnaJ homolog subfamily B member 6 OS=Xenopus tropicalis GN=dnajb6
PE=2 SV=1
Length = 242
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
+YY +LGV RNAS +D+KKAY K+A KW+PDK PDNK EAE + V EAYE++SD
Sbjct: 2 VEYYDVLGVQRNASPEDIKKAYRKLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDS 59
>sp|Q5R8H0|DNJB6_PONAB DnaJ homolog subfamily B member 6 OS=Pongo abelii GN=DNAJB6 PE=2
SV=1
Length = 326
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 47/56 (83%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV R+AS +D+KKAY K+A KW+PDK P+NK+EAE K +V EAYE++SD
Sbjct: 3 DYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSD 58
>sp|O75190|DNJB6_HUMAN DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1
SV=2
Length = 326
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 47/56 (83%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV R+AS +D+KKAY K+A KW+PDK P+NK+EAE K +V EAYE++SD
Sbjct: 3 DYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSD 58
>sp|Q9QYI7|DNJB8_MOUSE DnaJ homolog subfamily B member 8 OS=Mus musculus GN=Dnajb8 PE=2
SV=1
Length = 227
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 47/58 (81%)
Query: 3 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
A+YY++LGV +AS +D+KKAY K+A +W+PDK PDNK+EAE K +V EAYE++SD
Sbjct: 2 ANYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKQVSEAYEVLSDS 59
>sp|Q6AYU3|DNJB6_RAT DnaJ homolog subfamily B member 6 OS=Rattus norvegicus GN=Dnajb6
PE=1 SV=1
Length = 357
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV R+AS +D+KKAY K A KW+PDK P+NK+EAE K +V EAYE++SD
Sbjct: 3 DYYEVLGVQRHASPEDIKKAYRKQALKWHPDKNPENKEEAERKFKQVAEAYEVLSD 58
>sp|O54946|DNJB6_MOUSE DnaJ homolog subfamily B member 6 OS=Mus musculus GN=Dnajb6 PE=1
SV=4
Length = 365
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV R+AS +D+KKAY K A KW+PDK P+NK+EAE K +V EAYE++SD
Sbjct: 3 DYYEVLGVQRHASPEDIKKAYRKQALKWHPDKNPENKEEAERKFKQVAEAYEVLSD 58
>sp|Q8NHS0|DNJB8_HUMAN DnaJ homolog subfamily B member 8 OS=Homo sapiens GN=DNAJB8 PE=1
SV=1
Length = 232
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 3 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQVR 62
A+YY++LGV +AS +D+KKAY K+A +W+PDK PDNK+EAE K V EAYE++SD +
Sbjct: 2 ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKK 61
Query: 63 CKL 65
L
Sbjct: 62 RSL 64
>sp|Q9QYI5|DNJB2_MOUSE DnaJ homolog subfamily B member 2 OS=Mus musculus GN=Dnajb2 PE=2
SV=2
Length = 277
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
A YY+IL V R+AS DD+KKAY K A +W+PDK PDNK+ AE K V EAYE++SD+
Sbjct: 2 ASYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDK 59
>sp|P25686|DNJB2_HUMAN DnaJ homolog subfamily B member 2 OS=Homo sapiens GN=DNAJB2 PE=1
SV=3
Length = 324
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/58 (58%), Positives = 44/58 (75%)
Query: 3 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
A YY+IL V R+AS DD+KKAY + A +W+PDK PDNK+ AE K V EAYE++SD+
Sbjct: 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDK 59
>sp|Q7Z6W7|DNJB7_HUMAN DnaJ homolog subfamily B member 7 OS=Homo sapiens GN=DNAJB7 PE=2
SV=2
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LG+ R AS +D+KKAY K+A KW+PDK P+NK+EAE K V EAYE++S+
Sbjct: 3 DYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSN 58
>sp|Q9QYI8|DNJB7_MOUSE DnaJ homolog subfamily B member 7 OS=Mus musculus GN=Dnajb7 PE=2
SV=2
Length = 312
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV R AS +D+K+AY K+A KW+PDK P+NK+EAE K V EAYE++S+
Sbjct: 3 DYYEVLGVQRYASPEDIKRAYRKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSN 58
>sp|Q6L0S6|DNAJ_PICTO Chaperone protein DnaJ OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=dnaJ
PE=3 SV=1
Length = 357
Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 1 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
M DYY ILGVDRNAS DD+KKA+ ++A K++PD P N KEAE K + EAYE++SD
Sbjct: 1 MAKDYYAILGVDRNASQDDIKKAFRELAKKYHPDANPGN-KEAEEKFKEIAEAYEVLSDP 59
Query: 61 VRCKLQKGPRLNPYGGIQGLKW-DF 84
+ K + G W DF
Sbjct: 60 QKRKQYDETGTTDFNAGSGFNWQDF 84
>sp|B9KAB9|DNAJ_THENN Chaperone protein DnaJ OS=Thermotoga neapolitana (strain ATCC
49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1
Length = 370
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 47/56 (83%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY+ILGV RNA+ ++++KAY+++ +W+PD++P+N+KEAE + + EAYE++SD
Sbjct: 7 DYYEILGVPRNATQEEIRKAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSD 62
>sp|O35723|DNJB3_MOUSE DnaJ homolog subfamily B member 3 OS=Mus musculus GN=Dnajb3 PE=2
SV=1
Length = 242
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 45/57 (78%)
Query: 3 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV R AS + ++KAY K+A KW+PDK P++K+EAE + +V +AYE++SD
Sbjct: 2 VDYYEVLGVPRQASAEAIRKAYRKLALKWHPDKNPEHKEEAERRFKQVAQAYEVLSD 58
>sp|Q862Z4|DNJB3_MACFU DnaJ homolog subfamily B member 3 OS=Macaca fuscata fuscata
GN=DNAJB3 PE=2 SV=1
Length = 242
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 44/57 (77%)
Query: 3 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
A+YY++LGV +D+KKAY K+A KW+PDK PDNK+EAE + +V EAYE++SD
Sbjct: 2 ANYYEVLGVQVQRFPEDIKKAYRKLALKWHPDKNPDNKEEAERRFKQVAEAYEVLSD 58
>sp|Q8WWF6|DNJB3_HUMAN DnaJ homolog subfamily B member 3 OS=Homo sapiens GN=DNAJB3 PE=1
SV=1
Length = 145
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 44/57 (77%)
Query: 3 ADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++L V R AS + +KKAY K+A KW+PDK P+NK+EAE + +V EAYE++SD
Sbjct: 2 VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSD 58
>sp|Q9WZV3|DNAJ_THEMA Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589
/ MSB8 / DSM 3109 / JCM 10099) GN=dnaJ PE=3 SV=1
Length = 369
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 47/56 (83%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY+ILGV R+A+ +++K+AY+++ +W+PD++P+N+KEAE + + EAYE++SD
Sbjct: 7 DYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSD 62
>sp|A5IIT4|DNAJ_THEP1 Chaperone protein DnaJ OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1
Length = 369
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 47/56 (83%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY+ILGV R+A+ +++K+AY+++ +W+PD++P+N+KEAE + + EAYE++SD
Sbjct: 7 DYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSD 62
>sp|B1LCI2|DNAJ_THESQ Chaperone protein DnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ
PE=3 SV=1
Length = 369
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 47/56 (83%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY+ILGV R+A+ +++K+AY+++ +W+PD++P+N+KEAE + + EAYE++SD
Sbjct: 7 DYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSD 62
>sp|Q7NXI1|DNAJ_CHRVO Chaperone protein DnaJ OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131
/ NCTC 9757) GN=dnaJ PE=3 SV=1
Length = 375
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY +LGV+R+AS DD+KKAY K+A K++PD+ PD+ KEAE K V EAYEI+SD
Sbjct: 5 DYYDVLGVNRDASDDDIKKAYRKLAMKYHPDRNPDS-KEAEDKFKEVKEAYEILSD 59
>sp|Q8KCD8|DNAJ_CHLTE Chaperone protein DnaJ OS=Chlorobium tepidum (strain ATCC 49652 /
DSM 12025 / TLS) GN=dnaJ PE=3 SV=1
Length = 403
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 1 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
M DYY+ILGV R+A D++KKAY K+A K++PDK PDN KEAE K V EAYE++S+
Sbjct: 1 MKRDYYEILGVARSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEKFKEVNEAYEVLSN 58
>sp|Q1LJ82|DNAJ_RALME Chaperone protein DnaJ OS=Ralstonia metallidurans (strain CH34 /
ATCC 43123 / DSM 2839) GN=dnaJ PE=3 SV=1
Length = 379
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV +NAS D++KKAY K+A K +PD+ PDN KEAE K V EAYE++SD
Sbjct: 5 DYYEVLGVGKNASDDEIKKAYRKLAMKHHPDRNPDN-KEAEEKFKEVKEAYEMLSD 59
>sp|B7IFE0|DNAJ_THEAB Chaperone protein DnaJ OS=Thermosipho africanus (strain TCF52B)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 44/56 (78%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY+ILGV RNAS +++++AY+++ KW+PD+ N+KEAE K + EAYE++SD
Sbjct: 5 DYYEILGVSRNASQEEIRQAYKQLIKKWHPDRNHQNRKEAEEKFKEIQEAYEVLSD 60
>sp|B3QPW8|DNAJ_CHLP8 Chaperone protein DnaJ OS=Chlorobaculum parvum (strain NCIB 8327)
GN=dnaJ PE=3 SV=1
Length = 401
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 1 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
M DYY+ILGV R+A D++KKAY K+A K++PDK PDN KEAE K EAYE++S+
Sbjct: 1 MKRDYYEILGVSRSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEKFKEANEAYEVLSN 58
>sp|Q5NSW9|DNAJ_BURM1 Chaperone protein DnaJ OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=dnaJ PE=3 SV=1
Length = 376
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 6/72 (8%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQVRC 63
DYY++LGV +NAS D++KKAY K+A K++PD+ PDN K+AE V EAYE++SD
Sbjct: 5 DYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDN-KDAEEHFKEVKEAYEMLSDS--- 60
Query: 64 KLQKGPRLNPYG 75
QK + YG
Sbjct: 61 --QKRAAYDQYG 70
>sp|B3EE31|DNAJ_CHLL2 Chaperone protein DnaJ OS=Chlorobium limicola (strain DSM 245 /
NBRC 103803) GN=dnaJ PE=3 SV=1
Length = 401
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 1 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
M DYY++LGV R+AS D++KKAY K+A +++PDK PDN K+AE V EAYE++S+
Sbjct: 1 MKKDYYEVLGVSRSASKDEIKKAYRKLALQYHPDKNPDN-KDAEEHFKEVNEAYEVLSN 58
>sp|Q8KRC9|DNAJ_MYXXA Chaperone protein DnaJ OS=Myxococcus xanthus GN=dnaJ PE=3 SV=1
Length = 391
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 1 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
M DYY+ LGVDR+AS +D+KKAY K+A K++PD P NK AE K +V A+E++SD
Sbjct: 1 MADDYYQTLGVDRSASAEDVKKAYRKLARKYHPDVNPGNKA-AEEKFKQVSAAFEVLSDT 59
Query: 61 VRCKL 65
+ KL
Sbjct: 60 RKRKL 64
>sp|B0VA24|DNAJ_ACIBY Chaperone protein DnaJ OS=Acinetobacter baumannii (strain AYE)
GN=dnaJ PE=3 SV=1
Length = 370
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV + AS D++KKAY K+A K++PD+ PDN EAE K EAYEI+SD
Sbjct: 5 DYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN-AEAEEKFKEASEAYEILSD 59
>sp|A3MA88|DNAJ_ACIBT Chaperone protein DnaJ OS=Acinetobacter baumannii (strain ATCC
17978 / NCDC KC 755) GN=dnaJ PE=3 SV=2
Length = 370
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV + AS D++KKAY K+A K++PD+ PDN EAE K EAYEI+SD
Sbjct: 5 DYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN-AEAEEKFKEASEAYEILSD 59
>sp|B0VQ00|DNAJ_ACIBS Chaperone protein DnaJ OS=Acinetobacter baumannii (strain SDF)
GN=dnaJ PE=3 SV=1
Length = 370
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV + AS D++KKAY K+A K++PD+ PDN EAE K EAYEI+SD
Sbjct: 5 DYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN-AEAEEKFKEASEAYEILSD 59
>sp|B2I2G6|DNAJ_ACIBC Chaperone protein DnaJ OS=Acinetobacter baumannii (strain ACICU)
GN=dnaJ PE=3 SV=1
Length = 370
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV + AS D++KKAY K+A K++PD+ PDN EAE K EAYEI+SD
Sbjct: 5 DYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN-AEAEEKFKEASEAYEILSD 59
>sp|B7I2B2|DNAJ_ACIB5 Chaperone protein DnaJ OS=Acinetobacter baumannii (strain AB0057)
GN=dnaJ PE=3 SV=1
Length = 370
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV + AS D++KKAY K+A K++PD+ PDN EAE K EAYEI+SD
Sbjct: 5 DYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN-AEAEEKFKEASEAYEILSD 59
>sp|B7GV08|DNAJ_ACIB3 Chaperone protein DnaJ OS=Acinetobacter baumannii (strain
AB307-0294) GN=dnaJ PE=3 SV=1
Length = 370
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV + AS D++KKAY K+A K++PD+ PDN EAE K EAYEI+SD
Sbjct: 5 DYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN-AEAEEKFKEASEAYEILSD 59
>sp|A6LJ63|DNAJ_THEM4 Chaperone protein DnaJ OS=Thermosipho melanesiensis (strain BI429
/ DSM 12029) GN=dnaJ PE=3 SV=1
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 44/56 (78%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY+ILGV RNA+ +++++AY+K+ KW+PD+ +NKK AE K + EAYE++SD
Sbjct: 5 DYYEILGVSRNATQEEIRQAYKKLIKKWHPDRNYENKKLAEEKFKEIQEAYEVLSD 60
>sp|B4S9D0|DNAJ_PROA2 Chaperone protein DnaJ OS=Prosthecochloris aestuarii (strain DSM
271 / SK 413) GN=dnaJ PE=3 SV=1
Length = 395
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 1 MGADYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
M DYY++LGV R+A+ D++KKAY K+A K++PDK PDN EAE K EAYE++S+
Sbjct: 1 MKRDYYEVLGVGRSATKDEIKKAYRKLAMKYHPDKNPDN-SEAEEKFKEANEAYEVLSN 58
>sp|Q6F6R1|DNAJ_ACIAD Chaperone protein DnaJ OS=Acinetobacter sp. (strain ADP1) GN=dnaJ
PE=3 SV=1
Length = 368
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV + AS D++KKAY K+A K++PD+ PDN EAE K EAYE++SD
Sbjct: 5 DYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDN-AEAEDKFKEASEAYEVLSD 59
>sp|Q7VVY3|DNAJ_BORPE Chaperone protein DnaJ OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=dnaJ PE=3 SV=1
Length = 385
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
DYY++LGV +NAS +DLKKAY K+A K++PD+ PD+ KEAE K EAYE++ D+
Sbjct: 5 DYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDS-KEAEEKFKEAKEAYEVLGDE 60
>sp|Q7W520|DNAJ_BORPA Chaperone protein DnaJ OS=Bordetella parapertussis (strain 12822
/ ATCC BAA-587 / NCTC 13253) GN=dnaJ PE=3 SV=1
Length = 377
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
DYY++LGV +NAS +DLKKAY K+A K++PD+ PD+ KEAE K EAYE++ D+
Sbjct: 5 DYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDS-KEAEEKFKEAKEAYEVLGDE 60
>sp|Q7WGI5|DNAJ_BORBR Chaperone protein DnaJ OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=dnaJ PE=3 SV=1
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
DYY++LGV +NAS +DLKKAY K+A K++PD+ PD+ KEAE K EAYE++ D+
Sbjct: 5 DYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDS-KEAEEKFKEAKEAYEVLGDE 60
>sp|Q46XI8|DNAJ_CUPPJ Chaperone protein DnaJ OS=Cupriavidus pinatubonensis (strain
JMP134 / LMG 1197) GN=dnaJ PE=3 SV=1
Length = 379
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV +NAS D++KKAY K+A K++PD+ PD+ KE+E K V EAYE++SD
Sbjct: 5 DYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPDS-KESEEKFKEVKEAYEMLSD 59
>sp|C1DD87|DNAJ_LARHH Chaperone protein DnaJ OS=Laribacter hongkongensis (strain HLHK9)
GN=dnaJ PE=3 SV=1
Length = 380
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
D+Y +LGV+R+AS DD+KKAY K+A K++PD+ PD+ K+AE K EAYEI+SD
Sbjct: 5 DFYDVLGVNRDASDDDIKKAYRKLAMKYHPDRNPDS-KDAEEKFKEAKEAYEILSD 59
>sp|A6Q486|DNAJ_NITSB Chaperone protein DnaJ OS=Nitratiruptor sp. (strain SB155-2)
GN=dnaJ PE=3 SV=1
Length = 373
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSDQ 60
DYY++L VDRNAS +++KKAY K+A K++PD+ PDN EAE K + EAY+++SD+
Sbjct: 5 DYYELLEVDRNASFEEIKKAYRKLALKYHPDRNPDN-PEAEEKFKLINEAYQVLSDE 60
>sp|Q8XW41|DNAJ_RALSO Chaperone protein DnaJ OS=Ralstonia solanacearum (strain GMI1000)
GN=dnaJ PE=3 SV=1
Length = 380
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 4 DYYKILGVDRNASCDDLKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEIVSD 59
DYY++LGV +NAS D++KKAY K+A K++PD+ PD+ KEAE K EAYE++SD
Sbjct: 5 DYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPDS-KEAEEKFKEAKEAYEMLSD 59
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.136 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,337,223
Number of Sequences: 539616
Number of extensions: 1280678
Number of successful extensions: 5000
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 3481
Number of HSP's gapped (non-prelim): 983
length of query: 85
length of database: 191,569,459
effective HSP length: 56
effective length of query: 29
effective length of database: 161,350,963
effective search space: 4679177927
effective search space used: 4679177927
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 55 (25.8 bits)