Query 047026
Match_columns 596
No_of_seqs 184 out of 295
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 11:45:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047026.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047026hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nkg_A Rhamnogalacturonase B; 100.0 1E-119 4E-124 989.7 44.1 458 1-589 40-508 (508)
2 2nsm_A Carboxypeptidase N cata 97.9 1.9E-05 6.5E-10 85.4 9.1 96 292-414 320-416 (439)
3 1h8l_A Carboxypeptidase GP180 97.8 4.3E-05 1.5E-09 81.1 9.5 80 292-394 300-379 (380)
4 3mn8_A LP15968P; catalytic dom 97.8 3.1E-05 1.1E-09 83.8 7.8 90 293-406 337-428 (435)
5 1uwy_A Carboxypeptidase M; met 97.7 3.1E-05 1.1E-09 83.5 6.5 92 292-407 295-390 (426)
6 4aw7_A GH86A beta-porphyranase 96.6 0.0028 9.4E-08 70.7 7.3 72 496-574 502-575 (591)
7 1xpn_A Hypothetical protein PA 96.5 0.01 3.6E-07 56.4 9.7 106 279-387 28-166 (170)
8 2w87_A Esterase D, XYL-CBM35; 96.5 0.016 5.6E-07 52.8 10.7 90 487-591 41-132 (139)
9 3qec_A Putative carbohydrate b 96.2 0.028 9.7E-07 52.4 10.6 96 289-387 20-146 (150)
10 2wz8_A Cellulosome protein doc 96.2 0.016 5.4E-07 54.1 8.7 86 487-588 49-147 (156)
11 2w3j_A Carbohydrate binding mo 96.1 0.029 9.9E-07 51.6 9.9 88 487-591 41-130 (145)
12 2w47_A Lipolytic enzyme, G-D-S 96.1 0.035 1.2E-06 50.6 10.4 89 487-591 42-132 (144)
13 2vzp_A Aocbm35, EXO-beta-D-glu 95.3 0.08 2.7E-06 47.0 9.6 85 487-587 41-127 (127)
14 2bgo_A Endo-B1,4-mannanase 5C; 94.7 0.13 4.5E-06 47.3 9.0 91 481-591 32-123 (140)
15 3kcp_A Cellulosomal-scaffoldin 93.1 0.13 4.5E-06 53.3 6.7 65 291-368 156-223 (321)
16 2cdp_A Beta-agarase 1; carbohy 91.2 0.58 2E-05 43.5 8.1 88 489-588 71-159 (160)
17 1uxz_A Cellulase B; carbohydra 91.0 1.3 4.3E-05 39.6 9.8 77 496-589 52-129 (131)
18 2xsu_A Catechol 1,2 dioxygenas 89.5 0.76 2.6E-05 47.6 7.9 63 291-359 135-202 (312)
19 2y8k_A Arabinoxylanase, carboh 89.0 2.2 7.5E-05 46.3 11.6 91 482-591 394-484 (491)
20 2bum_B Protocatechuate 3,4-dio 88.2 0.85 2.9E-05 45.6 7.0 65 290-360 76-150 (241)
21 2azq_A Catechol 1,2-dioxygenas 88.1 0.83 2.8E-05 47.3 7.0 65 290-360 130-199 (311)
22 2bum_A Protocatechuate 3,4-dio 87.7 0.53 1.8E-05 46.1 5.0 64 290-359 50-124 (209)
23 2boy_A 3-chlorocatechol 1,2-di 87.2 0.64 2.2E-05 46.8 5.4 65 290-360 100-169 (254)
24 1tmx_A Hydroxyquinol 1,2-dioxy 86.9 0.79 2.7E-05 47.1 6.0 65 290-360 131-199 (293)
25 3th1_A Chlorocatechol 1,2-diox 86.3 0.82 2.8E-05 46.2 5.7 64 291-360 98-166 (260)
26 3t63_M 3,4-PCD, protocatechuat 85.8 1.3 4.3E-05 44.3 6.7 67 288-360 73-149 (238)
27 1dmh_A 1,2-CTD, catechol 1,2-d 84.5 0.89 3.1E-05 47.0 5.0 63 292-360 133-202 (311)
28 3n9t_A PNPC; phospholipid bind 83.1 1.1 3.8E-05 45.9 5.0 65 290-360 127-196 (290)
29 3o5u_A Chlorocatechol 1,2-diox 82.7 1.3 4.4E-05 44.7 5.2 64 291-360 102-171 (257)
30 1ti6_B Pyrogallol hydroxytrans 82.5 1.4 4.8E-05 44.6 5.4 48 340-392 227-274 (274)
31 1w9s_A BH0236 protein, BHCBM6; 82.4 15 0.00052 32.8 11.9 94 482-589 45-140 (142)
32 3t63_A 3,4-PCD, protocatechuat 81.5 1.8 6.2E-05 42.0 5.6 64 291-360 47-116 (200)
33 3hhy_A 1,2-CTD, catechol 1,2-d 81.4 1.7 5.9E-05 44.3 5.6 63 292-360 131-198 (280)
34 2v4v_A GH59 galactosidase; hyd 81.3 11 0.00038 33.1 10.4 79 497-588 49-128 (129)
35 1uy4_A Endo-1,4-beta-xylanase 81.0 11 0.00038 34.2 10.4 89 482-589 54-143 (145)
36 1od3_A Putative xylanase; hydr 78.8 13 0.00043 34.8 10.3 89 482-589 76-165 (168)
37 3e8v_A Possible transglutamina 78.4 9.4 0.00032 32.0 8.2 51 308-369 10-64 (82)
38 2h4e_A Transthyretin; amyloid, 76.7 2.4 8.1E-05 38.4 4.4 64 291-364 8-75 (127)
39 1tg7_A Beta-galactosidase; TIM 75.0 3.3 0.00011 49.0 6.2 69 486-572 856-930 (971)
40 2g2n_A Transthyretin-like prot 74.2 3.3 0.00011 36.7 4.6 63 291-364 2-68 (114)
41 1uxx_X Xylanase U; carbohydrat 73.9 40 0.0014 29.8 11.9 77 497-590 51-129 (133)
42 3irp_X URO-adherence factor A; 71.4 5.8 0.0002 42.7 6.6 66 291-365 304-372 (429)
43 4hg6_B Cellulose synthase subu 67.8 8 0.00027 44.1 6.9 77 483-571 318-402 (707)
44 2vzs_A CSXA, EXO-beta-D-glucos 67.0 1.2 3.9E-05 53.2 0.0 86 486-587 945-1032(1032)
45 1f86_A Transthyretin Thr119Met 66.9 3.3 0.00011 36.8 2.9 51 309-364 12-66 (115)
46 4hg6_B Cellulose synthase subu 66.7 3.1 0.00011 47.3 3.4 74 483-572 61-139 (707)
47 1oo2_A Transthyretin; retinol- 66.3 4.8 0.00016 35.9 3.9 61 294-364 3-67 (119)
48 4ank_A Transthyretin; hormone 65.6 6.6 0.00023 36.3 4.8 63 292-364 29-95 (147)
49 3d3a_A Beta-galactosidase; pro 59.8 10 0.00036 42.6 6.0 65 485-573 511-575 (612)
50 3c7f_A Xylanase D, endo-1,4-be 59.0 51 0.0018 35.2 11.2 81 496-588 405-485 (487)
51 3qva_A Transthyretin-like prot 58.5 14 0.00047 32.9 5.3 59 291-364 8-69 (116)
52 3kpt_A Collagen adhesion prote 58.3 9.4 0.00032 39.8 5.0 48 309-364 18-65 (355)
53 3og2_A Beta-galactosidase; TIM 55.0 17 0.00056 43.2 6.8 68 487-571 889-961 (1003)
54 3fn9_A Putative beta-galactosi 54.1 12 0.00042 42.5 5.4 66 486-573 65-132 (692)
55 2ww8_A RRGA, cell WALL surface 52.8 26 0.00091 41.0 8.1 69 309-386 58-128 (893)
56 1yua_A Topoisomerase I; gene-r 49.3 6.7 0.00023 34.7 1.7 86 69-180 23-110 (122)
57 4e8d_A Glycosyl hydrolase, fam 48.4 8.8 0.0003 43.0 3.0 43 509-569 527-569 (595)
58 3iwv_A 5-hydroxyisourate hydro 48.3 9.7 0.00033 34.9 2.7 64 292-365 25-93 (138)
59 2pz4_A Protein GBS052; SPAB, G 47.7 18 0.00062 35.3 4.9 47 340-387 176-224 (239)
60 2x5p_A FBA2, fibronectin bindi 46.3 27 0.00092 31.0 5.3 45 309-364 38-82 (121)
61 3lpf_A Beta-glucuronidase; alp 44.4 23 0.00077 39.5 5.5 65 486-572 72-138 (605)
62 3cmg_A Putative beta-galactosi 43.3 20 0.0007 40.2 5.0 65 486-572 54-120 (667)
63 2h0e_A Transthyretin-like prot 42.6 17 0.00057 32.6 3.3 58 293-364 9-71 (121)
64 4fxt_A Uncharacterized protein 42.5 73 0.0025 30.8 8.1 64 292-366 7-70 (202)
65 3gm8_A Glycoside hydrolase fam 42.3 29 0.001 40.1 6.2 66 486-573 71-137 (801)
66 3uaf_A TTR-52; beta barrel/san 42.0 28 0.00096 30.8 4.7 51 291-351 3-55 (117)
67 2je8_A Beta-mannosidase; glyco 41.3 22 0.00077 41.2 5.1 63 487-571 70-134 (848)
68 3bga_A Beta-galactosidase; NYS 40.1 26 0.00087 41.7 5.3 64 487-572 132-196 (1010)
69 1yq2_A Beta-galactosidase; gly 39.9 27 0.00093 41.6 5.5 65 486-572 123-191 (1024)
70 2pz4_A Protein GBS052; SPAB, G 39.2 11 0.00038 36.9 1.8 26 339-364 71-96 (239)
71 3phz_A Ricin B-related lectin; 36.1 57 0.0019 33.2 6.4 105 311-442 77-192 (286)
72 3oba_A Beta-galactosidase; TIM 32.9 27 0.00091 41.7 3.9 65 486-572 117-183 (1032)
73 1r6v_A Subtilisin-like serine 32.3 80 0.0027 35.8 7.5 41 314-364 464-504 (671)
74 3v9f_A Two-component system se 30.8 47 0.0016 37.1 5.4 27 339-365 731-757 (781)
75 3bwu_D FIMD, outer membrane us 29.6 46 0.0016 29.1 4.0 26 352-380 27-52 (125)
76 4b0m_A F1 capsule-anchoring pr 28.1 30 0.001 31.1 2.6 29 348-379 22-50 (136)
77 1cwv_A Invasin; integrin-bindi 27.5 2.1E+02 0.007 31.0 9.6 80 289-383 22-103 (492)
78 4a2l_A BT_4663, two-component 27.2 43 0.0015 37.6 4.2 27 339-365 737-763 (795)
79 1b4r_A Protein (PKD1_human); P 26.2 59 0.002 26.7 3.8 28 353-380 52-79 (80)
80 3ott_A Two-component system se 25.2 52 0.0018 36.6 4.4 27 339-365 702-729 (758)
81 4eiu_A Uncharacterized hypothe 24.6 3.6E+02 0.012 26.8 9.8 66 292-363 9-76 (249)
82 3kpt_A Collagen adhesion prote 22.7 34 0.0012 35.4 2.2 65 295-363 249-313 (355)
83 3thd_A Beta-galactosidase; TIM 21.8 37 0.0013 38.5 2.3 41 510-568 553-595 (654)
84 3cih_A Putative alpha-rhamnosi 21.5 1.1E+02 0.0039 34.5 6.3 51 488-574 64-114 (739)
85 2xtl_A Cell WALL surface ancho 21.4 31 0.0011 37.2 1.6 44 340-384 378-423 (452)
86 2x9x_A RRGB, cell WALL surface 21.4 31 0.0011 37.1 1.6 44 340-384 372-417 (444)
87 3idu_A Uncharacterized protein 21.3 1.9E+02 0.0066 25.6 6.5 56 355-414 49-105 (127)
88 3isy_A Bsupi, intracellular pr 21.3 52 0.0018 29.2 2.7 15 352-366 89-103 (120)
89 4d8m_A Pesticidal crystal prot 20.9 4E+02 0.014 29.7 10.2 96 482-589 485-584 (587)
90 3hn3_A Beta-G1, beta-glucuroni 20.2 52 0.0018 36.4 3.1 65 486-572 82-154 (613)
No 1
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=100.00 E-value=1.2e-119 Score=989.66 Aligned_cols=458 Identities=19% Similarity=0.263 Sum_probs=400.3
Q ss_pred CCCccCCCCCCCCccEEEEEecCCCCccceeeccCceEEEEeccCCEEEEEEEeecCCCCCCCccccceeEEEEEecCcc
Q 047026 1 MDNLLDLKSSESSRGYWDINWNLPEGQDRYQLLNGGEYSVINMSNDSVEVSFRSSYDPSIQSTKLPLSVDIRYILRSGVS 80 (596)
Q Consensus 1 ~~~~l~~~~~~~~~gY~d~~w~~~~~~~~~~~~~gt~~~vi~~~~~~i~vs~~~~~~~~~~g~~~~l~l~~~~v~r~G~s 80 (596)
+|+|+ .++++++| +..|. .. ++++. .+++|+|||++. +||||||||+|++
T Consensus 40 ~e~~~--~~~~s~~g------sg~G~-~~--------~~~~~-~~~~i~vs~~~~------------~l~~~~v~~~g~s 89 (508)
T 1nkg_A 40 TELQY--SSQGSHIG------SGLGS-AT--------VTATQ-SGDYIKVTCVTD------------TLTQYMVVHNGDP 89 (508)
T ss_dssp EECBC--SSSCBEET------TCCSS-CE--------EEEEE-ETTEEEEEEECS------------SEEEEEEEETTCC
T ss_pred EEccc--cCCCcccc------cCCCc-ce--------EEEEe-cCCEEEEEEEeC------------CceEEEEEeCCCc
Confidence 35666 48888888 33322 23 33333 479999999983 8999999999999
Q ss_pred eeEEEEeecCCCCCCCCCCCceEEEEEcCCCCCccceecccccccCCCCCCCCCCCcceeeeeceEEeecCCCCCCCceE
Q 047026 81 GFHCYSIYERPPGCRAFDLAQTRLAFKLRRDKFHYMAITDAKQRIMPLPEDLLPGRGKQLIVPESVLLVNPINPDLKGEV 160 (596)
Q Consensus 81 giY~y~~~~~~~~~p~~~lge~R~v~Rl~~~~f~~~~~~d~r~~~~P~~~d~~~~~~~~l~~~eav~l~~~~~~~~~G~~ 160 (596)
|||||+++++ +++|+|+|+|||||+++|++. +++||+|+++ .|++ +++|+++.. +|++
T Consensus 90 g~Y~y~~~~~-----~~~lge~R~v~Rl~~~~f~~~------~r~~~~p~~~---~~~~-v~~~d~~~l-------~G~~ 147 (508)
T 1nkg_A 90 IIHMATYITA-----EPSIGELRFIARLNSDLLPNE------EPFGDVSTTA---DGTA-IEGSDVFLV-------GSET 147 (508)
T ss_dssp EEEEEEEESS-----CCTTSCEEEEEEECTTTCCEE------ETTGGGGCCT---TCEE-EETTTEEEE-------TTEE
T ss_pred eEEEEEeecc-----CCCCCceEEEEEcChhhCCCc------cccCCCCccc---cCcE-eeeccceee-------CCEE
Confidence 9999999975 679999999999999999762 6889999875 5766 467765444 7999
Q ss_pred eeceecccccccCceEEEEeeCCceEEEEEcCCCCcccCCcceecccccCCc---cEEEEEeecccccCceeeccccCcc
Q 047026 161 DDKYQYSMDNKDGGLHGWISSGPIIGFWIIFPSHEFRNGGPTKQNLTVHTGP---TCLAMFHGTHYIGNEILAHFQEGEA 237 (596)
Q Consensus 161 ~sKY~~s~~~~D~~vhG~~s~g~~vG~W~I~~s~E~~sGGPlkqdL~~h~g~---~~l~y~~s~Hy~g~~~~~~~~~Ge~ 237 (596)
+||||||+++||++||||++ ++||||||+||+||++||||||||++|+|+ ++||||+|+|++++++ +.
T Consensus 148 ~~KY~~s~~~~D~~vhG~~~--~~vG~w~I~~s~E~~sGGP~kqdL~~h~~~~~~~~~~y~~s~H~~t~~~----~~--- 218 (508)
T 1nkg_A 148 RSKFYSSERFIDDQRHCIAG--DAHRVCMILNQYESSSGGPFHRDINSNNGGSYNALYWYMNSGHVQTESY----RM--- 218 (508)
T ss_dssp EEGGGGCCBGGGCSEEEEEC--SSCEEEEECCCCTTCSSCTTCBCCCEEECSSCEEEEEEEECSTTCCSCC----CC---
T ss_pred ccceeccccceecceEEEEC--CCeEEEEEcCCcccccCCCcchhhhccCCcccceeeeeEeecccccccc----cc---
Confidence 99999999999999999964 999999999999999999999999999999 8999999999887764 44
Q ss_pred cceeeceEEEEEcCCCCCcccchhHHHHHHHHHhhhccCCCcCCCC---CCCCCCCCceeEEEEEEeeecccccCCCCcc
Q 047026 238 WRKVFGPIFVYLNSTSDASKAYNLWIDAKKQRLLQEAAWPYDFVSS---PYYLTANERGSATGRFFVQDKFVSSSLIPAK 314 (596)
Q Consensus 238 w~kv~GP~~~y~N~g~~~~~~~~l~~DA~~~~~~E~~~wpysf~~s---~~y~~~~~RGtVsG~v~~~D~~~~~~~~pa~ 314 (596)
|||||||||||+|++++ ++|||+|++| ++|||+++||+|+|+|+ + .|+.
T Consensus 219 --g~~GP~~~y~n~g~~~~-----------------~~wpysf~~s~~~~~y~~~~~RGtVsG~V~--G-------~~~~ 270 (508)
T 1nkg_A 219 --GLHGPYSMYFSRSGTPS-----------------TSIDTSFFADLDIKGYVAASGRGKVAGTAS--G-------ADSS 270 (508)
T ss_dssp --EEEEEEEEEEESSCCCC-----------------SCCCCGGGGGTTCTTCCCGGGCBEEEEEEE--S-------SCTT
T ss_pred --cccccEEEEECCCCCCC-----------------CCCCCccccccCccCCcCcccccEEEEEEc--C-------ccCC
Confidence 79999999999999873 3999999999 99999999999999987 2 3344
Q ss_pred eeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCeeEEEEEEcceeeeEeeeeEEEEeCCCeeeecceEEee
Q 047026 315 YAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGVYGLHGWVPGFIGDYLDKALVTISAGSQTELGNLTYVP 394 (596)
Q Consensus 315 ~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~~~~~VtV~aG~t~~l~~l~~~~ 394 (596)
...|++ | ++|+|||||+||++|+|+|++||||+|+|+||++|+ ...+..|+|+||++++++ |+|++
T Consensus 271 ~~avv~--------~--~~k~~qywt~td~~G~FtI~~V~pGtY~L~a~~~G~---~~~~~~VtV~aG~t~~l~-i~~~~ 336 (508)
T 1nkg_A 271 MDWVVH--------W--YNDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEY---AVATSSVTVSAGSTTTKN-ISGSV 336 (508)
T ss_dssp SCEEEE--------E--ECSSCEEEEECCTTCEEECCCBCSEEEEEEEEETTE---EEEEEEEEECTTCEEECC-EECCC
T ss_pred ceEEEE--------E--cCCCceeEEEECCCCcEEeCCcCCceEEEEEEECce---EEEEeEEEEcCCCeeEee-eEEec
Confidence 443444 1 478999999999999999999999999999999987 366678999999999996 99987
Q ss_pred CCCCCceEEEeccCCCCcceecCCCCcccccccccCCchhhhcccccccccccCCCCCeeEEeeccCCCCCeeEEEEeec
Q 047026 395 LRNGPTVWEIGFPDRTALGCYVPDVNPMYVNKLFLNSPEKYRQYGLWDRYTDVHPESDQFFTVGVNDPKKDWFFAHVDRR 474 (596)
Q Consensus 395 ~~~g~~LweIG~~Drta~~F~~~d~~~~~~n~~~~~hp~~~R~yglW~~y~~~~P~~dl~ytVG~S~~~~Dw~ya~~~~~ 474 (596)
+ ++++|||||+|||+|.||++||+.+ .|||+|+||| +|+ ||+||||+|++ +|||||||+.
T Consensus 337 ~-~g~~iW~IG~pDrta~eF~~~d~~~-------~~hp~~~r~~-~W~---------~l~ytVG~S~~-~Dw~ya~~~~- 396 (508)
T 1nkg_A 337 K-TGTTIFKIGEWDGQPTGFRNAANQL-------RMHPSDSRMS-SWG---------PLTYTVGSSAL-TDFPMAVFKS- 396 (508)
T ss_dssp C-CCSEEEEEECSSSSCTTSBTHHHHT-------TSCTTCTTSC-CCC---------SCEEETTTSCG-GGSBSEEETT-
T ss_pred C-CCCeeEEeeCCCCCchhhcCCCccc-------ccCcchhccc-ccC---------CeEEEeCcCch-hcCCeEEECC-
Confidence 6 7999999999999999999998422 3599999998 895 49999999999 7999999965
Q ss_pred CCCCCCCCccEEEEEEeCCCccceEEEEEEEecc-CCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEE
Q 047026 475 GPDNKYLPTTWTIKFHLDSIIKGTYNLRLAIASA-TRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIH 553 (596)
Q Consensus 475 ~~~~~~~~~~w~I~F~L~~~~~~~~tLriala~a-~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ 553 (596)
.+++|+|+|+|+++|.+++||||+||+| +++++||+|||+... ++.++.+++||||+||++||+|++++|+
T Consensus 397 ------~~~~w~I~F~l~~~~~~~~tLri~la~a~a~~~~qV~VN~~~~~--~~~~~~~~~~~~i~R~~~~G~~~~~~~~ 468 (508)
T 1nkg_A 397 ------VNNPVTIKFTATSAQTGAATLRIGTTLSFAGGRPQATINSYTGS--APAAPTNLDSRGVTRGAYRGLGEVYDVS 468 (508)
T ss_dssp ------TTCCEEEEEEECGGGCSCEEEEEEEEEEETTCEEEEEETTEECC--CCCCCCCCCSCCGGGTCCCSCCCEEEEE
T ss_pred ------CCCcEEEEEEcCcccCCceEEEEEehhhccCCCeEEEECCcCCc--CccccccCCCCeEEecceeeeeEEEEEE
Confidence 3699999999999887899999999998 589999999998664 5578899999999999999999999999
Q ss_pred eecCceeeeccEEEEEEeecCC--CCc--eEEEEEEEEec
Q 047026 554 VSSLLLIKGDNSMFLVQSRSGD--PVC--GVLYDYLRLEA 589 (596)
Q Consensus 554 ipa~~L~~G~NtI~l~~~~g~s--~~~--~vmyD~IrLe~ 589 (596)
||+++|++|+|+|+|+++++++ +|+ +|||||||||.
T Consensus 469 ipa~~L~~G~NtI~lt~~~~s~~~~fls~~vmyD~I~L~~ 508 (508)
T 1nkg_A 469 IPSGTIVAGTNTITINVISGSSGDTYLSPNFIFDCVELFQ 508 (508)
T ss_dssp ECTTSSCSEEEEEEEEEECSCCCSGGGSSEEEEEEEEEEC
T ss_pred EcHHHeecCceEEEEEeccCCCCCccccccEEEEEEEecC
Confidence 9999999999999999999986 587 99999999984
No 2
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=97.92 E-value=1.9e-05 Score=85.43 Aligned_cols=96 Identities=20% Similarity=0.282 Sum_probs=62.4
Q ss_pred ceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCeeEEEEEEcceeeeE
Q 047026 292 RGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGVYGLHGWVPGFIGDY 371 (596)
Q Consensus 292 RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~ 371 (596)
.+.|+|+|+..+ +.|..+|.|.+.. ....+.||.+|.|.+ .++||+|+|++...|+.
T Consensus 320 ~~~i~G~V~D~~------g~pi~gA~V~v~~-------------~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--- 376 (439)
T 2nsm_A 320 HQGIKGMVLDQN------YNNLANAVISVSG-------------INHDVTSGDHGDYFR-LLLPGIYTVSATAPGYD--- 376 (439)
T ss_dssp SCSEEEEEECTT------SCBCTTCEEEETT-------------EEEEEECCTTSEEEE-CCCSEEEEEEEECTTEE---
T ss_pred ccceEEEEEcCC------CCCccceEEEEEc-------------ccceeEECCCCeEEE-ccCCeeEEEEEEecCce---
Confidence 589999998643 7899999999963 234688999999998 59999999999999875
Q ss_pred eeeeEEEE-eCCCeeeecceEEeeCCCCCceEEEeccCCCCcce
Q 047026 372 LDKALVTI-SAGSQTELGNLTYVPLRNGPTVWEIGFPDRTALGC 414 (596)
Q Consensus 372 ~~~~~VtV-~aG~t~~l~~l~~~~~~~g~~LweIG~~Drta~~F 414 (596)
.....|+| .++.++ + ++++.+ ...+|-||.+.+.+..+.
T Consensus 377 ~~~~~v~v~~~~~~~-~-~~~L~~--~~~~L~eVvV~~~~~~~~ 416 (439)
T 2nsm_A 377 PETVTVTVGPAEPTL-V-NFHLKR--SIPQVSPVRRAPSRRHGV 416 (439)
T ss_dssp CEEEEEEECSSSCEE-C-CEECEE--C-----------------
T ss_pred eEEEEEEEecCCcce-E-eEEEcc--CCCccccEEEecCCCCCc
Confidence 44456888 566654 3 688876 468999999988665433
No 3
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=97.82 E-value=4.3e-05 Score=81.08 Aligned_cols=80 Identities=16% Similarity=0.134 Sum_probs=64.2
Q ss_pred ceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCeeEEEEEEcceeeeE
Q 047026 292 RGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGVYGLHGWVPGFIGDY 371 (596)
Q Consensus 292 RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~ 371 (596)
.++|+|+|+..+ ++.|..+|.|.+.. ....+.||.+|.|.+ +++||+|+|.+...|+.
T Consensus 300 ~~~i~G~V~D~~-----~g~pi~~A~V~v~~-------------~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--- 357 (380)
T 1h8l_A 300 HRGIWGFVLDAT-----DGRGILNATISVAD-------------INHPVTTYKDGDYWR-LLVQGTYKVTASARGYD--- 357 (380)
T ss_dssp GCEEEEEEEETT-----TCSBCTTCEEEETT-------------EEEEEECCTTSEEEE-CCCSEEEEEEEECTTBC---
T ss_pred cccceEEEEeCC-----CCCccCceEEEEec-------------CcceeEECCCEEEEE-ecCCCcEEEEEEEcCcc---
Confidence 589999998751 37899999999963 234688999999999 59999999999999875
Q ss_pred eeeeEEEEeCCCeeeecceEEee
Q 047026 372 LDKALVTISAGSQTELGNLTYVP 394 (596)
Q Consensus 372 ~~~~~VtV~aG~t~~l~~l~~~~ 394 (596)
.....|+|.+|+++.+ ++.+++
T Consensus 358 ~~~~~v~v~~~~~~~~-~~~L~~ 379 (380)
T 1h8l_A 358 PVTKTVEVDSKGGVQV-NFTLSR 379 (380)
T ss_dssp CEEEEEEECSSCEEEC-CEEECB
T ss_pred ceEEEEEEcCCCeEEE-EEEecc
Confidence 4445799999987776 577643
No 4
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=97.78 E-value=3.1e-05 Score=83.83 Aligned_cols=90 Identities=16% Similarity=0.198 Sum_probs=62.8
Q ss_pred eeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCeeEEEEEEcceeeeEe
Q 047026 293 GSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGVYGLHGWVPGFIGDYL 372 (596)
Q Consensus 293 GtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~ 372 (596)
..|+|+|+..+ +.|..+|.|.+.... ...+.||++|.|.+. ++||+|+|++...|+.. .
T Consensus 337 ~gv~G~V~D~~------G~pi~gA~V~v~g~~------------~~~~~Td~~G~y~~~-l~pG~Y~l~vs~~Gy~~--~ 395 (435)
T 3mn8_A 337 IGIKGLVTDAS------GFPIADANVYVAGLE------------EKPMRTSKRGEYWRL-LTPGLYSVHASAFGYQT--S 395 (435)
T ss_dssp SSEEEEEECSS------SCBCTTCEEEETTCT------------TSCEECCTTCEEEEC-CCSEEEEEEEEBTTBCC--C
T ss_pred ceeEEEEECCC------CCccCceEEEEeccc------------ccceEeCCCCeEEEe-cCCCcEEEEEEEccccc--c
Confidence 45999998654 889999999997420 126789999999885 99999999999998721 4
Q ss_pred eeeEEEEeCCC--eeeecceEEeeCCCCCceEEEec
Q 047026 373 DKALVTISAGS--QTELGNLTYVPLRNGPTVWEIGF 406 (596)
Q Consensus 373 ~~~~VtV~aG~--t~~l~~l~~~~~~~g~~LweIG~ 406 (596)
..+.|+|.+++ .+.+ ++++++ ...+|-||.+
T Consensus 396 ~~~~v~v~~~~~~~~~~-~~~L~~--~~~~L~~v~~ 428 (435)
T 3mn8_A 396 APQQVRVTNDNQEALRL-DFKLAP--VETNFDGISS 428 (435)
T ss_dssp CCEEEEECCCSSSCEEC-CEECCB--C---------
T ss_pred eEEEEEEecCCcceeEE-EEEEee--cCCCCCeeEe
Confidence 45679999887 3356 588876 4778888865
No 5
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=97.72 E-value=3.1e-05 Score=83.50 Aligned_cols=92 Identities=17% Similarity=0.136 Sum_probs=63.6
Q ss_pred ceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCeeEEEEEEcceeeeE
Q 047026 292 RGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGVYGLHGWVPGFIGDY 371 (596)
Q Consensus 292 RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~ 371 (596)
.++|+|+|+..+ +.|..+|.|.+..... + .-+.||.+|.|.+ .+.||+|+|.+...|+.
T Consensus 295 ~~~I~G~V~D~~------g~pi~gA~V~v~g~~~---------~--~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--- 353 (426)
T 1uwy_A 295 HLGVKGQVFDQN------GNPLPNVIVEVQDRKH---------I--CPYRTNKYGEYYL-LLLPGSYIINVTVPGHD--- 353 (426)
T ss_dssp GCSEEEEEECTT------SCBCCSCEEEETTCCC---------S--SCCBCCTTCEEEE-CCCSEEEEEEEECSSSC---
T ss_pred cceeEEEEECCC------CCccCceEEEEEeccc---------c--ceeEeCCCCEEEe-ccCCeeEEEEEEEcCcc---
Confidence 578999997644 7899999999974432 1 1267999999999 59999999999999865
Q ss_pred eeeeEEEEeCCC----eeeecceEEeeCCCCCceEEEecc
Q 047026 372 LDKALVTISAGS----QTELGNLTYVPLRNGPTVWEIGFP 407 (596)
Q Consensus 372 ~~~~~VtV~aG~----t~~l~~l~~~~~~~g~~LweIG~~ 407 (596)
..+..|+|.+++ ++.+ ++++++ +..+|-||.+-
T Consensus 354 ~~~~~v~v~~~~~~~~~~~~-~~~L~~--~~~~l~evv~~ 390 (426)
T 1uwy_A 354 PHITKVIIPEKSQNFSALKK-DILLPF--QGQLDSIPVSN 390 (426)
T ss_dssp CEEEEEEECSSCSSSSCEEC-CEECSS--CC---------
T ss_pred cEEEEEEEeCCCccccceEE-EEEEec--CCccccceeec
Confidence 444568888876 5555 577765 47789988774
No 6
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius}
Probab=96.61 E-value=0.0028 Score=70.67 Aligned_cols=72 Identities=19% Similarity=0.263 Sum_probs=53.6
Q ss_pred cceEEEEEEEeccCC--CeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeeccEEEEEEeec
Q 047026 496 KGTYNLRLAIASATR--SDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDNSMFLVQSRS 573 (596)
Q Consensus 496 ~~~~tLriala~a~~--~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g 573 (596)
.+.++|||++....+ ..+.|.|||..+..|. -+ -+.|.+ -|+- +....+|+||+++|++++|+|.++.+.+
T Consensus 502 ~g~A~LRvg~gR~~g~s~~p~V~vNG~~v~vP~--~w-~g~dq~-~r~~---fFg~ieipVp~~lL~~~~NtI~VtFPD~ 574 (591)
T 4aw7_A 502 SGRASLRMSIGRPVSASKKPVVKINGTAVSVPD--NW-KGYGQS-NRNI---FFGMIEVPFDIQLLKNGDNNVDITFSDG 574 (591)
T ss_dssp SEEEEEEEEEEEETTSCSCCEEEETTEEECCCS--CC-SSCCCT-TSSE---EEEEEEEEECGGGCCSEEEEEEEECSSC
T ss_pred CceEEEEEEcCcCCCcCCCCEEEECCEEeccCc--cc-cccccc-Chhh---ceEEEEecCCHHHHhcCCCeEEEEecCC
Confidence 578999999999743 4699999999887553 11 122221 2443 4567899999999998999999999875
Q ss_pred C
Q 047026 574 G 574 (596)
Q Consensus 574 ~ 574 (596)
.
T Consensus 575 G 575 (591)
T 4aw7_A 575 G 575 (591)
T ss_dssp C
T ss_pred C
Confidence 3
No 7
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=96.51 E-value=0.01 Score=56.37 Aligned_cols=106 Identities=16% Similarity=0.243 Sum_probs=64.3
Q ss_pred cCCCCCCCC--CCCCceeEEEEEEeeecccccCCCCcceeEEEEcCCCC-------------CCC---------cccccc
Q 047026 279 DFVSSPYYL--TANERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSART-------------EGG---------WQTESK 334 (596)
Q Consensus 279 sf~~s~~y~--~~~~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~-------------~g~---------wq~~~~ 334 (596)
.+|+..+|- ...+.++|+|++.+.... ..-.+..+..|.|.+... .|- |.-+..
T Consensus 28 ~~Fd~~e~a~~~~~G~~tI~G~a~~~~~~--G~~~~~~G~~V~L~P~T~Ys~er~~~yG~~~~g~~p~~~~~~~~dp~~~ 105 (170)
T 1xpn_A 28 PDFPEHEYAATQQVGGGVINGDLYLTSAS--GAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRA 105 (170)
T ss_dssp CSSCCGGGGTCCCCCCCCEEEEECEECTT--SCEECCTTEEEEEEECCTHHHHHHHHSSSEEGGGCCSSSCCCCCCTTHH
T ss_pred CCCCHHHHHHHhCCCCceEEEEEEEEcCC--CCEEecCCCEEEEEeCCHHHHHHHHHhCccccccccccccccccCchhh
Confidence 455554433 334568999999887521 112445566677763211 011 111223
Q ss_pred cceeEEEECCccceEeCCccCCeeEEEEEE---cc------eeeeEeeeeEEEEeCCCeeee
Q 047026 335 DYQFWVQTDSKGNFTVKNVVPGVYGLHGWV---PG------FIGDYLDKALVTISAGSQTEL 387 (596)
Q Consensus 335 ~yqywt~td~~G~FtI~nVrpGtY~L~a~~---~G------~~G~~~~~~~VtV~aG~t~~l 387 (596)
.|.--|.+|++|+|++.+|+||+|=|.+.+ .. ..|.... +.|+|..|++.++
T Consensus 106 ~y~r~t~~D~~G~F~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~l~-k~Vtv~~Ge~~~v 166 (170)
T 1xpn_A 106 TYVREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVT-KLVTVSGSQPQKV 166 (170)
T ss_dssp HHCEEEEECSSCEEEECSCCSEEEEEEEEEEEEEEETTEEEEEEEEEE-EEEEECCSSCEEE
T ss_pred cceeEEEecCCCcEEecCCCCccEEEEEEEeccCccccccccccceEE-EEEEeCCCcEEEE
Confidence 456678999999999999999999999842 21 1122233 4589998887655
No 8
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=96.50 E-value=0.016 Score=52.78 Aligned_cols=90 Identities=19% Similarity=0.237 Sum_probs=55.4
Q ss_pred EEEEeCCCccceEEEEEEEeccC--CCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeecc
Q 047026 487 IKFHLDSIIKGTYNLRLAIASAT--RSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDN 564 (596)
Q Consensus 487 I~F~L~~~~~~~~tLriala~a~--~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~N 564 (596)
|.|++.....|.|+|+|-.|... ...+.|.|||..... .+..++... +. -.+...++.|+ |++|.|
T Consensus 41 v~~~V~v~~aG~Y~l~~ryang~~~~r~~~l~VNG~~~g~---~~v~~p~Tg-----~W-~~w~t~~~~v~---L~aG~n 108 (139)
T 2w87_A 41 VVWAIDATSSGRRTLTIRYANGGTANRNGSLVINGGSNGN---YTVSLPTTG-----AW-TTWQTATIDVD---LVQGNN 108 (139)
T ss_dssp EEEEEEESSCEEEEEEEEEECCSSSCCCEEEEETTTTTCE---EEECCCCCS-----ST-TCCEEEEEEEE---ECSEEE
T ss_pred EEEEEECCCCcEEEEEEEEECCCCCCceEEEEECCEEcce---eEEEecCCC-----CC-CccEEEEEEEE---ECCCce
Confidence 45555433378999999998753 467999999976510 011222110 00 01233345554 899999
Q ss_pred EEEEEEeecCCCCceEEEEEEEEecCC
Q 047026 565 SMFLVQSRSGDPVCGVLYDYLRLEAPT 591 (596)
Q Consensus 565 tI~l~~~~g~s~~~~vmyD~IrLe~p~ 591 (596)
+|.|+...+. + ++-.|+|+|+.+.
T Consensus 109 tI~l~~~~~~-g--~~niD~i~v~~~~ 132 (139)
T 2w87_A 109 IVQLSATTAE-G--LPNIDSLSVVGGT 132 (139)
T ss_dssp EEEEEESSTT-C--CCEEEEEEEESSS
T ss_pred EEEEEEcCCC-C--CEEEEEEEEecCC
Confidence 9999865332 2 4778999998653
No 9
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=96.21 E-value=0.028 Score=52.42 Aligned_cols=96 Identities=17% Similarity=0.262 Sum_probs=62.0
Q ss_pred CCCceeEEEEEEeeecccccCCCCcceeEEEEcCCC-------------CCCC---------cccccccceeEEEECCcc
Q 047026 289 ANERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSAR-------------TEGG---------WQTESKDYQFWVQTDSKG 346 (596)
Q Consensus 289 ~~~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~-------------~~g~---------wq~~~~~yqywt~td~~G 346 (596)
..+.++|.|++...... ..-....+..|.|.+.. +... -..+-..|.--|.+|++|
T Consensus 20 ~~G~~tI~G~a~~r~~~--G~~~~c~g~~V~L~P~T~Y~~e~~~~~g~~~~~~r~~~~~~~~~d~~~~~y~r~t~cD~~G 97 (150)
T 3qec_A 20 QVGEGVINGDLYLTSAS--GAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATYVREATTDQNG 97 (150)
T ss_dssp CCCCEEEEEEEEEECTT--SCEEECCSCEEEEEECCHHHHHHHHHHTTCBSTTCCTTCCCCCCCTTSGGGCEEEECCTTS
T ss_pred CCCcceEEEEEEEECCC--CCEecCCCCEEEEEeCCHHHHHHHHHhcCcccccccCCCCCCCCChhHhcceeEEEeCCCC
Confidence 44679999999887521 11124566677775311 0000 112345677789999999
Q ss_pred ceEeCCccCCeeEEEEEEcc---------eeeeEeeeeEEEEeCCCeeee
Q 047026 347 NFTVKNVVPGVYGLHGWVPG---------FIGDYLDKALVTISAGSQTEL 387 (596)
Q Consensus 347 ~FtI~nVrpGtY~L~a~~~G---------~~G~~~~~~~VtV~aG~t~~l 387 (596)
+|++.+|+||+|-|.+.+.= ..|.... +.|+|+.|++..+
T Consensus 98 ~F~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~lm-k~V~v~ggq~~~v 146 (150)
T 3qec_A 98 RFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVT-KLVTVSGSQPQKV 146 (150)
T ss_dssp EEEEEEECSEEEEEEEEEEEEEESSSSEEEEEEEEE-EEEEESSSCCCCE
T ss_pred cEEECCCCCccEEEEEEEEeccCCCCCcccccceEE-EEEEEcCCcEEEE
Confidence 99999999999999887421 1233334 3499999887654
No 10
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=96.17 E-value=0.016 Score=54.15 Aligned_cols=86 Identities=19% Similarity=0.162 Sum_probs=53.0
Q ss_pred EEEE-eCCCccceEEEEEEEeccC------------CCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEE
Q 047026 487 IKFH-LDSIIKGTYNLRLAIASAT------------RSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIH 553 (596)
Q Consensus 487 I~F~-L~~~~~~~~tLriala~a~------------~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ 553 (596)
|.|+ +.....|.|+|+|-.+... ...+.|.|||.... ...++.+.. .- .+....+.
T Consensus 49 vtf~~V~~~~aG~Y~l~irYang~~~~~~~y~~~~~~r~~~v~VNG~~~~-----~v~fp~Tg~-----W~-~~~~~tv~ 117 (156)
T 2wz8_A 49 LQFNNVYVPQAGTYRMVVQFANAEVFGQHSYNNNVVDRYCSISVNGGPEK-----GHYFFNTRG-----WN-TYRTDIID 117 (156)
T ss_dssp EEEEEEEESSCEEEEEEEEEECCCBC-------CBCCEEEEEEETTCCCE-----EEEECCCSS-----TT-CCEEEEEE
T ss_pred EEEEEEecCCCcEEEEEEEEECCCcccccccCCccCcceEEEEECCceee-----EEEeCCCCC-----CC-cceEEEEE
Confidence 4454 4433378999999998753 35699999997532 112221110 10 23455566
Q ss_pred eecCceeeeccEEEEEEeecCCCCceEEEEEEEEe
Q 047026 554 VSSLLLIKGDNSMFLVQSRSGDPVCGVLYDYLRLE 588 (596)
Q Consensus 554 ipa~~L~~G~NtI~l~~~~g~s~~~~vmyD~IrLe 588 (596)
|+ |++|.|+|+|+-.. .+++ +.=.|+|.|.
T Consensus 118 V~---L~aG~NtI~~~~~~-~~~~-~pdiD~i~v~ 147 (156)
T 2wz8_A 118 VY---LNAGNNTIRFYNGT-SGSY-APNIDKIAIA 147 (156)
T ss_dssp EE---ECSEEEEEEEECCS-TTCB-CCEEEEEEEE
T ss_pred EE---ECCCceEEEEEecC-CCCC-CcEEEEEEEe
Confidence 66 99999999998431 1232 4567888875
No 11
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=96.06 E-value=0.029 Score=51.56 Aligned_cols=88 Identities=17% Similarity=0.255 Sum_probs=54.9
Q ss_pred EEEEeCCCccceEEEEEEEecc--CCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeecc
Q 047026 487 IKFHLDSIIKGTYNLRLAIASA--TRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDN 564 (596)
Q Consensus 487 I~F~L~~~~~~~~tLriala~a--~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~N 564 (596)
|.|++.....|.|+|.|-.|.. ....+.|.|||.... +..++.+. +.. .+...++.|+ |++|.|
T Consensus 41 v~~~V~v~~aG~Y~l~~ryang~~~~r~~~l~VNG~~~~-----~v~~p~Tg-----~W~-~w~t~~~~v~---L~aG~n 106 (145)
T 2w3j_A 41 IVWSLSAASAKTYTAQIRFGNGGTSARRATVVVNDSQIK-----TLDFPTNS-----NWT-QWQTVNVDIP---LKAGTN 106 (145)
T ss_dssp EEEEEEESSCEEEEEEEEEECCSSSCCCEEEEETTEEEE-----EECCCCCS-----CTT-SCEEEEEEEE---ECSEEE
T ss_pred EEEEEECCCCeEEEEEEEEECCCCCCeEEEEEECCeEee-----EEEecCCC-----CCC-eeEEEEEEEE---ECCCce
Confidence 4555544347899999999854 446799999997542 12222111 100 1233344444 899999
Q ss_pred EEEEEEeecCCCCceEEEEEEEEecCC
Q 047026 565 SMFLVQSRSGDPVCGVLYDYLRLEAPT 591 (596)
Q Consensus 565 tI~l~~~~g~s~~~~vmyD~IrLe~p~ 591 (596)
+|+|....+. + ++-.|+|+|+...
T Consensus 107 tI~l~~~~~~-g--~~niD~i~v~~~~ 130 (145)
T 2w3j_A 107 SIKLVAETAD-G--LANIDSIRVTGNG 130 (145)
T ss_dssp EEEEEECSTT-C--CCEEEEEEECSTT
T ss_pred EEEEEEecCc-C--CEEEEEEEEEcCC
Confidence 9999864332 3 5788999998543
No 12
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=96.06 E-value=0.035 Score=50.60 Aligned_cols=89 Identities=21% Similarity=0.263 Sum_probs=53.9
Q ss_pred EEEEeCCCccceEEEEEEEecc--CCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeecc
Q 047026 487 IKFHLDSIIKGTYNLRLAIASA--TRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDN 564 (596)
Q Consensus 487 I~F~L~~~~~~~~tLriala~a--~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~N 564 (596)
|.|++.....|.|+|+|-.+.. ....+.|.|||..... +..++.... .. .+....+.|+ |.+|.|
T Consensus 42 v~~~V~v~~aG~Y~l~~ryan~~~~~~~~~l~VNG~~~~~----~v~~p~Tg~-----w~-~w~~~~~~v~---L~aG~n 108 (144)
T 2w47_A 42 IEWNVNAPSSGSYALIFRYANGTTANRPMRITVNGNIVKP----SMDFVSTGA-----WT-TWNEAGIVAN---LNQGNN 108 (144)
T ss_dssp EEEEEEESSSEEEEEEEEEECCSSSCCCEEEEETTEEEEE----EECCCCCSS-----TT-CCEEEEEEEE---ECSEEE
T ss_pred EEEEEECCCCcEEEEEEEEECCCCCCeEEEEEECCeEeee----EEEecCCCC-----CC-eeEEEEEEEE---ECCCcc
Confidence 4555544347899999999875 3467999999975210 112221110 00 1122233343 899999
Q ss_pred EEEEEEeecCCCCceEEEEEEEEecCC
Q 047026 565 SMFLVQSRSGDPVCGVLYDYLRLEAPT 591 (596)
Q Consensus 565 tI~l~~~~g~s~~~~vmyD~IrLe~p~ 591 (596)
+|+|+...+ .+ ++-.|+|+|+...
T Consensus 109 tI~l~~~~~-~g--~~niD~i~v~~~~ 132 (144)
T 2w47_A 109 VIRATAIAS-DG--GPNVDYLKVFSAN 132 (144)
T ss_dssp EEEEEECST-TC--CCEEEEEEEEECT
T ss_pred EEEEEEeCC-CC--CEEEeEEEEEeCC
Confidence 999986432 23 5889999998543
No 13
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=95.34 E-value=0.08 Score=46.96 Aligned_cols=85 Identities=20% Similarity=0.255 Sum_probs=50.8
Q ss_pred EEEEeCCCccceEEEEEEEecc--CCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeecc
Q 047026 487 IKFHLDSIIKGTYNLRLAIASA--TRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDN 564 (596)
Q Consensus 487 I~F~L~~~~~~~~tLriala~a--~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~N 564 (596)
|.|++.....|.|+|+|-.|.. ....+.|.|||..... ...++.. ++.. .+....+.|. |++|.|
T Consensus 41 v~~~V~v~~aG~Y~l~~rya~~~~~~~~~~l~VnG~~~~~----~v~~p~t-----g~W~-~w~~~~~~v~---L~aG~n 107 (127)
T 2vzp_A 41 VEWTVTVPSAGTYDVVVRYANGTTTSRPLDFSVNGSISAS----GVAFGST-----GTWP-AWTTKTVRVT---LAAGVN 107 (127)
T ss_dssp EEEEEEESSSEEEEEEEEEECCSSSCCCEEEEETTEEEEE----EECCCCC-----SSTT-CCEEEEEEEE---ECSEEE
T ss_pred EEEEEEcCCCCEEEEEEEEEcCCCCCeEEEEEECCEEeee----EEEecCC-----CCCC-ceEEEEEEEE---ECCCce
Confidence 4555543347899999999885 3567999999975321 1122211 0110 1222233443 899999
Q ss_pred EEEEEEeecCCCCceEEEEEEEE
Q 047026 565 SMFLVQSRSGDPVCGVLYDYLRL 587 (596)
Q Consensus 565 tI~l~~~~g~s~~~~vmyD~IrL 587 (596)
+|+|....+. + ++-.|+|.+
T Consensus 108 tI~l~~~~~~-~--~~niD~i~v 127 (127)
T 2vzp_A 108 KIKAVATTAN-G--GPNVDKITL 127 (127)
T ss_dssp EEEEEECSTT-C--CCEEEEEEC
T ss_pred EEEEEEeCCC-C--CeEEEEEEC
Confidence 9999975332 2 467788864
No 14
>2bgo_A Endo-B1,4-mannanase 5C; carbohydrate binding protein, carbohydrate binding module; NMR {Cellvibrio japonicus} PDB: 2bgp_A
Probab=94.65 E-value=0.13 Score=47.31 Aligned_cols=91 Identities=13% Similarity=0.097 Sum_probs=58.8
Q ss_pred CCccEEEEEEeCCCccceEEEEEEEecc-CCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCce
Q 047026 481 LPTTWTIKFHLDSIIKGTYNLRLAIASA-TRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLL 559 (596)
Q Consensus 481 ~~~~w~I~F~L~~~~~~~~tLriala~a-~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L 559 (596)
.+..=.|.|+++..+.|.|.|.|..+.. ...+-.+.|||. ... -.++.... .+.+. .+ -.|
T Consensus 32 en~gdsVtf~VdVP~tG~YdLsI~Ya~~~G~k~n~L~VNG~-~~~-----V~fP~tt~---------~~~~~-~~--V~L 93 (140)
T 2bgo_A 32 QGAGSAVIWNVDVPVTGEYRINLTWSSPYSSKVNTLVMDGT-ALS-----YAFAEATV---------PVTYV-QT--KTL 93 (140)
T ss_dssp CSTTCEEEEEECCCSSEEEEEEEEECCCSSEEEEEEEETTE-EEE-----EEEESCCS---------CEEEE-EE--EEE
T ss_pred cCCCCEEEEEEecCCCcEEEEEEEeccCCCCceEEEEECCc-eeE-----EEECCcCC---------cEEEE-EE--EEe
Confidence 3455566777765558999999999765 335678999997 431 12221000 11111 11 678
Q ss_pred eeeccEEEEEEeecCCCCceEEEEEEEEecCC
Q 047026 560 IKGDNSMFLVQSRSGDPVCGVLYDYLRLEAPT 591 (596)
Q Consensus 560 ~~G~NtI~l~~~~g~s~~~~vmyD~IrLe~p~ 591 (596)
.+|.|+|.|.-.+| .|-++..|+|+|+-..
T Consensus 94 ~aG~NtI~i~~~~g--~WG~~~iD~I~l~~a~ 123 (140)
T 2bgo_A 94 SAGNHSFGVRVGSS--DWGYMNVHSLKLELLG 123 (140)
T ss_dssp CSSCEEEEEECCSS--SCCCCEEEEEEEEECC
T ss_pred cCCccEEEEEecCC--CceeEEEEEEEEEcCC
Confidence 99999999985433 3557899999999664
No 15
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=93.13 E-value=0.13 Score=53.25 Aligned_cols=65 Identities=15% Similarity=0.225 Sum_probs=46.4
Q ss_pred CceeEEEEEEeeecccc-cCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCe--eEEEEEEcce
Q 047026 291 ERGSATGRFFVQDKFVS-SSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGV--YGLHGWVPGF 367 (596)
Q Consensus 291 ~RGtVsG~v~~~D~~~~-~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGt--Y~L~a~~~G~ 367 (596)
.-++|+|-|...=-+-. .......++.|-+..++ .-+.+|++|+|+|.+|++|+ |+|.+.++|+
T Consensus 156 ~~~~vsGYi~~~~~~~~~~~~~~~~G~~V~i~gt~-------------~sa~tD~~G~f~I~~vp~~~~~ytl~i~~~g~ 222 (321)
T 3kcp_A 156 EGYKVSGYILPDFSFDATVAPLVKAGFKVEIVGTE-------------LYAVTDANGYFEITGVPANASGYTLKISRATY 222 (321)
T ss_dssp SSEEEEEEEEESSCCCTTTHHHHHSCCEEEETTSS-------------CEEECCTTSEEEEEEECCEEEEEEEEEECTEE
T ss_pred CCceEEEEEccccccccccchhccCCcEEEEEecc-------------ceeEECCCceEEEeccCCCCccEEEEEeecCc
Confidence 46899998876200000 00123345788886444 37889999999999999999 9999999976
Q ss_pred e
Q 047026 368 I 368 (596)
Q Consensus 368 ~ 368 (596)
+
T Consensus 223 l 223 (321)
T 3kcp_A 223 L 223 (321)
T ss_dssp C
T ss_pred e
Confidence 5
No 16
>2cdp_A Beta-agarase 1; carbohydrate-binding module, hydrolase; HET: GAL AAL; 1.59A {Saccharophagus degradans} PDB: 2cdo_A*
Probab=91.23 E-value=0.58 Score=43.51 Aligned_cols=88 Identities=18% Similarity=0.182 Sum_probs=49.6
Q ss_pred EEeCCCccceEEEEEEEecc-CCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeeccEEE
Q 047026 489 FHLDSIIKGTYNLRLAIASA-TRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDNSMF 567 (596)
Q Consensus 489 F~L~~~~~~~~tLriala~a-~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~ 567 (596)
|++.-.+.|.|+|.+-.|+. +++.++|+|||..... ....-.++. .+. -.+...+ ...=.|.+|.|+|+
T Consensus 71 y~V~v~~aG~Y~i~~rvas~~~g~~i~l~vdg~~~~~-~~g~~~vp~------tGW-~~w~t~t--~~~v~L~aG~htL~ 140 (160)
T 2cdp_A 71 YTIAVAQAGNYTISYQAGSGVTGGSIEFLVNENGSWA-SKTVTAVPN------QGW-DNFQPLN--GGSVYLSAGTHQVR 140 (160)
T ss_dssp EEEEESSCEEEEEEEEEEBSSSSCEEEEEEECSSSEE-EEEEEECCB------SCT-TCCEEEE--EEEEEECSEEEEEE
T ss_pred EEEEcCCCcEEEEEEEEEcCCCCceEEEEECCCCCce-eeeEEEcCC------CCC-ceeEEee--eeEEEeCCCeEEEE
Confidence 44332236889988888886 5678999999952100 001111111 111 0112222 21234679999999
Q ss_pred EEEeecCCCCceEEEEEEEEe
Q 047026 568 LVQSRSGDPVCGVLYDYLRLE 588 (596)
Q Consensus 568 l~~~~g~s~~~~vmyD~IrLe 588 (596)
|....++ .+ ++-.|.|+|.
T Consensus 141 l~~~g~~-~~-~~Nld~~~f~ 159 (160)
T 2cdp_A 141 LHGAGSN-NW-QWNLDKFTLS 159 (160)
T ss_dssp EEECSSS-SB-CCEEEEEEEE
T ss_pred EEEECCC-CC-cEEEEEEEEE
Confidence 9976433 22 4678998885
No 17
>1uxz_A Cellulase B; carbohydrate binding module, CBM6, mixted BETA1, 3-1, 4 linked glucan; 1.4A {Cellvibrio mixtus} SCOP: b.18.1.10 PDB: 1uy0_A* 1uyx_A* 1uyy_A* 1uyz_A* 1uz0_A*
Probab=90.98 E-value=1.3 Score=39.64 Aligned_cols=77 Identities=16% Similarity=0.228 Sum_probs=48.5
Q ss_pred cceEEEEEEEecc-CCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeeccEEEEEEeecC
Q 047026 496 KGTYNLRLAIASA-TRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDNSMFLVQSRSG 574 (596)
Q Consensus 496 ~~~~tLriala~a-~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~ 574 (596)
.+.++|.+-.|++ ++++++|++++ .. ++..+-.++... +. -.|...+.+|. |.+|.|+|+|....+
T Consensus 52 ~G~y~~~~rvas~~~gg~i~v~~~~-~g--~~~g~~~vp~Tg-----gw-~~w~t~~~~v~---l~~G~h~l~l~~~~g- 118 (131)
T 1uxz_A 52 SGSYLIEYRVASQNGGGSLTFEEAG-GA--PVHGTIAIPATG-----GW-QTWTTIQHTVN---LSAGSHQFGIKANAG- 118 (131)
T ss_dssp SEEEEEEEEEEESSCCEEEEEEETT-SC--SEEEEEEECCCS-----EE-EEEEEEEEEEE---ECSEEECEEEEEEEC-
T ss_pred CCceEEEEEEECCCCCcEEEEEECC-CC--CEeeEEEeCCCC-----CC-cccEEEEEEEE---eCCCeEEEEEEEcCC-
Confidence 5788888888775 46799999985 11 122223333221 11 12444444553 679999999998754
Q ss_pred CCCceEEEEEEEEec
Q 047026 575 DPVCGVLYDYLRLEA 589 (596)
Q Consensus 575 s~~~~vmyD~IrLe~ 589 (596)
++-.|.|+|+.
T Consensus 119 ----~~nld~~~f~~ 129 (131)
T 1uxz_A 119 ----GWNLNWIRINK 129 (131)
T ss_dssp ----CCEEEEEEEEE
T ss_pred ----CEEEEEEEEEE
Confidence 47889888863
No 18
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=89.48 E-value=0.76 Score=47.58 Aligned_cols=63 Identities=17% Similarity=0.210 Sum_probs=47.0
Q ss_pred CceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccc---ccccee--EEEECCccceEeCCccCCeeE
Q 047026 291 ERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTE---SKDYQF--WVQTDSKGNFTVKNVVPGVYG 359 (596)
Q Consensus 291 ~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~---~~~yqy--wt~td~~G~FtI~nVrpGtY~ 359 (596)
++-.|.|+|...+ +.|..+|.|=++.....|....+ ..+... ...||++|.|.|.-|+||.|.
T Consensus 135 ~~l~v~G~V~D~~------G~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~ 202 (312)
T 2xsu_A 135 DTLIIEGTVTDTE------GNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYG 202 (312)
T ss_dssp CEEEEEEEEEETT------SCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred eeEEEEEEEECCC------CCCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCccc
Confidence 4789999998765 89999999999766655533221 111222 367899999999999999997
No 19
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=89.02 E-value=2.2 Score=46.27 Aligned_cols=91 Identities=18% Similarity=0.267 Sum_probs=57.4
Q ss_pred CccEEEEEEeCCCccceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceee
Q 047026 482 PTTWTIKFHLDSIIKGTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIK 561 (596)
Q Consensus 482 ~~~w~I~F~L~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~ 561 (596)
++.| |.|++.....|.|+|.+-.|+.+++.++|+||+.... .+-.++.+ ++. -.|...+.+|. |.+
T Consensus 394 ~G~w-~~y~v~~~~~G~y~~~~rvas~~gg~i~v~~d~~~~~----g~~~vp~T-----ggw-~~w~t~~~~v~---l~~ 459 (491)
T 2y8k_A 394 EGEW-LEYTIRVRNPGYYNLSLRVAGISGSRVQVSFGNQDKT----GVWELPAT-----GGF-QTWTTATRQVF---LGA 459 (491)
T ss_dssp TTCE-EEEEEEESSCEEEEEEEEEEECTTCEEEEEETTEESS----CSEECCCC-----SEE-EEEEEEEEEEE---ECS
T ss_pred CCCe-EEEEEecCCCccEEEEEEEEcCCCceEEEEECCccce----eEEEeCCC-----CCC-cccEEEEEEEE---eCC
Confidence 3444 4566543336788888888877778999999997421 11122211 111 12444445553 789
Q ss_pred eccEEEEEEeecCCCCceEEEEEEEEecCC
Q 047026 562 GDNSMFLVQSRSGDPVCGVLYDYLRLEAPT 591 (596)
Q Consensus 562 G~NtI~l~~~~g~s~~~~vmyD~IrLe~p~ 591 (596)
|.|+|+|+...| ++-.|.|+|+..+
T Consensus 460 G~~~l~l~~~~g-----~~nld~~~f~~~~ 484 (491)
T 2y8k_A 460 GLQKLRINALSG-----GFNLNWIELSPIL 484 (491)
T ss_dssp EEEEEEEEESSS-----SEEEEEEEEEEC-
T ss_pred cEEEEEEEEecC-----CEEEEEEEEecCC
Confidence 999999997654 4889999998654
No 20
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=88.24 E-value=0.85 Score=45.59 Aligned_cols=65 Identities=26% Similarity=0.358 Sum_probs=48.9
Q ss_pred CCceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCccccc------cccee--E--EEECCccceEeCCccCCeeE
Q 047026 290 NERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTES------KDYQF--W--VQTDSKGNFTVKNVVPGVYG 359 (596)
Q Consensus 290 ~~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~------~~yqy--w--t~td~~G~FtI~nVrpGtY~ 359 (596)
.++=.|.|+|...+ ++|..+|.|=++.....|....+. .+..| + ..||++|.|+|.-|+||-|.
T Consensus 76 G~~i~v~G~V~D~~------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp 149 (241)
T 2bum_B 76 GERVIVHGYVRDQF------GRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYP 149 (241)
T ss_dssp SCEEEEEEEEEETT------SCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEE
T ss_pred CcEEEEEEEEECCC------CCCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCccc
Confidence 45678999999765 899999999998777666443221 11223 2 56799999999999999997
Q ss_pred E
Q 047026 360 L 360 (596)
Q Consensus 360 L 360 (596)
.
T Consensus 150 ~ 150 (241)
T 2bum_B 150 W 150 (241)
T ss_dssp E
T ss_pred c
Confidence 5
No 21
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=88.07 E-value=0.83 Score=47.30 Aligned_cols=65 Identities=23% Similarity=0.378 Sum_probs=48.5
Q ss_pred CCceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccc---ccccee--EEEECCccceEeCCccCCeeEE
Q 047026 290 NERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTE---SKDYQF--WVQTDSKGNFTVKNVVPGVYGL 360 (596)
Q Consensus 290 ~~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~---~~~yqy--wt~td~~G~FtI~nVrpGtY~L 360 (596)
.++=.|.|+|...+ +.|..+|.|=++.....|....+ ..+... ...||++|.|.|.-|+||-|.+
T Consensus 130 G~~l~v~G~V~D~~------G~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~~ 199 (311)
T 2azq_A 130 GVVMFLQGQVFDAN------GKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYGC 199 (311)
T ss_dssp CCEEEEEEEEECSS------SCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEEC
T ss_pred CcEEEEEEEEEcCC------CCCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcCC
Confidence 46789999998765 89999999999876666644221 112222 3668999999999999999973
No 22
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=87.71 E-value=0.53 Score=46.09 Aligned_cols=64 Identities=22% Similarity=0.394 Sum_probs=47.3
Q ss_pred CCceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccc------ccee--E--EEE-CCccceEeCCccCCee
Q 047026 290 NERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESK------DYQF--W--VQT-DSKGNFTVKNVVPGVY 358 (596)
Q Consensus 290 ~~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~------~yqy--w--t~t-d~~G~FtI~nVrpGtY 358 (596)
.++=.|.|+|...+ ++|..+|.|=++.....|....+.. +..| + ..| |++|.|++.-|+||-|
T Consensus 50 G~~l~v~G~V~D~~------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~y 123 (209)
T 2bum_A 50 GQRIRLEGQVFDGL------GLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAV 123 (209)
T ss_dssp SCEEEEEECEECTT------SCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCC
T ss_pred CCEEEEEEEEECCC------CCCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCcc
Confidence 34678999998754 8999999999987776664332111 2233 2 557 9999999999999998
Q ss_pred E
Q 047026 359 G 359 (596)
Q Consensus 359 ~ 359 (596)
.
T Consensus 124 p 124 (209)
T 2bum_A 124 P 124 (209)
T ss_dssp B
T ss_pred c
Confidence 6
No 23
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=87.23 E-value=0.64 Score=46.81 Aligned_cols=65 Identities=25% Similarity=0.432 Sum_probs=48.0
Q ss_pred CCceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCccccc---cccee--EEEECCccceEeCCccCCeeEE
Q 047026 290 NERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTES---KDYQF--WVQTDSKGNFTVKNVVPGVYGL 360 (596)
Q Consensus 290 ~~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~---~~yqy--wt~td~~G~FtI~nVrpGtY~L 360 (596)
.++-.|.|+|...+ +.|..+|.|=++.....|....+. .+... ...||++|.|+|.-|+||.|.+
T Consensus 100 G~~l~l~G~V~D~~------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~Y~~ 169 (254)
T 2boy_A 100 GDTLIFRGEVVDQE------GAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYEI 169 (254)
T ss_dssp SCEEEEEEEEECTT------SCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCC------CCCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCccccC
Confidence 46789999998765 899999999997666555332211 11222 2668999999999999999974
No 24
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=86.87 E-value=0.79 Score=47.07 Aligned_cols=65 Identities=17% Similarity=0.193 Sum_probs=49.1
Q ss_pred CCceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccc--cceeE--EEECCccceEeCCccCCeeEE
Q 047026 290 NERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESK--DYQFW--VQTDSKGNFTVKNVVPGVYGL 360 (596)
Q Consensus 290 ~~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~--~yqyw--t~td~~G~FtI~nVrpGtY~L 360 (596)
.++=.|.|+|...+ ++|..+|.|=++.....|....+.. +..++ ..||++|.|.|.-|+||-|.+
T Consensus 131 G~~l~v~G~V~D~~------G~Pv~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 199 (293)
T 1tmx_A 131 GEPCWVEGTVTDTD------GNPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPI 199 (293)
T ss_dssp SCEEEEEEEEEETT------SCBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCC------CCCCCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEEEECCCcccC
Confidence 45778999998765 8999999999987766664332111 23344 567999999999999999974
No 25
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=86.33 E-value=0.82 Score=46.19 Aligned_cols=64 Identities=19% Similarity=0.200 Sum_probs=47.2
Q ss_pred CceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcc--cc-cccceeE--EEECCccceEeCCccCCeeEE
Q 047026 291 ERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQ--TE-SKDYQFW--VQTDSKGNFTVKNVVPGVYGL 360 (596)
Q Consensus 291 ~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq--~~-~~~yqyw--t~td~~G~FtI~nVrpGtY~L 360 (596)
++=.|+|+|...+ ++|..+|.|=++.....|-.. .+ .....++ ..||++|.|.|.-|+||-|-+
T Consensus 98 ~pl~v~G~V~D~~------G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~Ypi 166 (260)
T 3th1_A 98 KPLIIRGTVRSDT------GELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVPYQI 166 (260)
T ss_dssp CEEEEEEEEEETT------SCBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CEEEEEEEEECCC------CCCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCCCCC
Confidence 4568999998765 899999999998766666332 11 1122222 568999999999999999954
No 26
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=85.85 E-value=1.3 Score=44.27 Aligned_cols=67 Identities=21% Similarity=0.294 Sum_probs=49.9
Q ss_pred CCCCceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCccccc--------ccceeE--EEECCccceEeCCccCCe
Q 047026 288 TANERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTES--------KDYQFW--VQTDSKGNFTVKNVVPGV 357 (596)
Q Consensus 288 ~~~~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~--------~~yqyw--t~td~~G~FtI~nVrpGt 357 (596)
+..++=.|.|+|...+ ++|..+|.|=++.....|....+. .+...+ ..||++|.|+|.-|+||-
T Consensus 73 ~~G~~i~l~G~V~D~~------G~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~ 146 (238)
T 3t63_M 73 PIGERIIVAGRVVDQY------GKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGP 146 (238)
T ss_dssp CSSCEEEEEEEEEETT------SCBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCC
T ss_pred CCCcEEEEEEEEECCC------CCCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcC
Confidence 3456788999999765 899999999998776666443211 122233 578999999999999999
Q ss_pred eEE
Q 047026 358 YGL 360 (596)
Q Consensus 358 Y~L 360 (596)
|..
T Consensus 147 Yp~ 149 (238)
T 3t63_M 147 APW 149 (238)
T ss_dssp EEE
T ss_pred ccC
Confidence 976
No 27
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=84.53 E-value=0.89 Score=47.05 Aligned_cols=63 Identities=24% Similarity=0.392 Sum_probs=46.8
Q ss_pred ceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccc-----cccceeE--EEECCccceEeCCccCCeeEE
Q 047026 292 RGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTE-----SKDYQFW--VQTDSKGNFTVKNVVPGVYGL 360 (596)
Q Consensus 292 RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~-----~~~yqyw--t~td~~G~FtI~nVrpGtY~L 360 (596)
+=.|.|+|...+ +.|..+|.|=++.....|....+ ..+...+ ..||++|.|+|.-|+||-|.+
T Consensus 133 ~l~l~G~V~D~~------G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~ 202 (311)
T 1dmh_A 133 TLILHGTIFDAD------GKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGC 202 (311)
T ss_dssp EEEEEEEEECTT------SCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred eEEEEEEEEcCC------CCCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCcccC
Confidence 568999998765 89999999999876666644321 1122233 568999999999999999964
No 28
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=83.07 E-value=1.1 Score=45.93 Aligned_cols=65 Identities=17% Similarity=0.235 Sum_probs=49.0
Q ss_pred CCceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccc---cccceeE--EEECCccceEeCCccCCeeEE
Q 047026 290 NERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTE---SKDYQFW--VQTDSKGNFTVKNVVPGVYGL 360 (596)
Q Consensus 290 ~~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~---~~~yqyw--t~td~~G~FtI~nVrpGtY~L 360 (596)
.++=.|.|+|...+ ++|..+|.|=++.....|....+ ..+...+ ..||++|.|+|.-|+||-|..
T Consensus 127 G~~l~l~G~V~D~~------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~ 196 (290)
T 3n9t_A 127 GVPALVYGRVLDVQ------GRPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPI 196 (290)
T ss_dssp SCEEEEEEEEEETT------SCBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCeEEEEEEEECCC------CCCCCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEEEeCCCCcCC
Confidence 45788999999765 89999999999877666644321 1122333 568999999999999999975
No 29
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=82.66 E-value=1.3 Score=44.71 Aligned_cols=64 Identities=22% Similarity=0.285 Sum_probs=47.5
Q ss_pred CceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCccccc---cc-ceeE--EEECCccceEeCCccCCeeEE
Q 047026 291 ERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTES---KD-YQFW--VQTDSKGNFTVKNVVPGVYGL 360 (596)
Q Consensus 291 ~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~---~~-yqyw--t~td~~G~FtI~nVrpGtY~L 360 (596)
++=.|.|+|...+ ++|..+|.|=++.....|....+. .+ ...+ ..||++|.|+|.-|+||-|-+
T Consensus 102 ~~l~l~G~V~D~~------G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~ 171 (257)
T 3o5u_A 102 DRMRFTGSVRDTS------GTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEI 171 (257)
T ss_dssp CEEEEEEEEECTT------CCBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEEECCCCEEC
T ss_pred CEEEEEEEEECCC------CCCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEEECCCCcCC
Confidence 4678999998765 899999999998776666443211 11 2333 468999999999999999953
No 30
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=82.45 E-value=1.4 Score=44.57 Aligned_cols=48 Identities=21% Similarity=0.239 Sum_probs=39.4
Q ss_pred EEECCccceEeCCccCCeeEEEEEEcceeeeEeeeeEEEEeCCCeeeecceEE
Q 047026 340 VQTDSKGNFTVKNVVPGVYGLHGWVPGFIGDYLDKALVTISAGSQTELGNLTY 392 (596)
Q Consensus 340 t~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~~~~~VtV~aG~t~~l~~l~~ 392 (596)
+++|+-|.|-+..+.+|.|+|.+.+.|+ ....++.| .|+.+.||+|.+
T Consensus 227 ~~~d~~G~f~~~~l~~G~y~v~v~a~g~----p~~~~~~~-~~~~~~lg~v~l 274 (274)
T 1ti6_B 227 AETNFFGEFKFDALDNGEYTVEIDADGK----SYSDTVVI-DDKSVDLGFIKL 274 (274)
T ss_dssp EECCTTSEEEEEEECSEEEEEEEEETTE----EEEEEEEE-SSSCEEEEEEEC
T ss_pred EeecCcCcEEEeccCCcceEEEEecCCC----CccceeEE-ccCccccceeeC
Confidence 5679999999999999999999999864 33456888 788888987753
No 31
>1w9s_A BH0236 protein, BHCBM6; carbohydrate-binding module, lectin, beta-glucan, carbohydrate binding, glycoside hydrolase; 1.59A {Bacillus halodurans} SCOP: b.18.1.10 PDB: 1w9t_A* 1w9w_A*
Probab=82.43 E-value=15 Score=32.83 Aligned_cols=94 Identities=15% Similarity=0.244 Sum_probs=53.9
Q ss_pred CccEEEEEE-eCCCccceEEEEEEEecc-CCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCce
Q 047026 482 PTTWTIKFH-LDSIIKGTYNLRLAIASA-TRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLL 559 (596)
Q Consensus 482 ~~~w~I~F~-L~~~~~~~~tLriala~a-~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L 559 (596)
++.| |.|+ ++-. .+.++|.+-+|++ +++.++|++++.... +..+-.++... + --.|...+.+|+ +
T Consensus 45 ~G~w-l~y~~vd~~-~G~~~~~~rvas~~~gg~iev~~d~~~G~--~~gt~~v~~Tg-----g-w~~w~t~~~~v~---~ 111 (142)
T 1w9s_A 45 DGDW-VKYERVHFE-RDASSIEVRVASDTPGGRIEIRTGSPTGT--LLGDVQVPNTG-----G-WQQWQTVTGNVQ---I 111 (142)
T ss_dssp TTCE-EEEEEEEES-SCEEEEEEEEEESSSCEEEEEEESSTTSC--EEEEEEECCCS-----E-EEEEEEEEEEEE---E
T ss_pred CCCE-EEEEeEecC-CCcEEEEEEEEcCCCCeEEEEEECCCCCe--EEEEEEeCCCC-----C-CcccEEEEEEEc---c
Confidence 3455 3444 3322 4677777777775 357999999976532 22222333211 1 124555555554 4
Q ss_pred eeeccEEEEEEeecCCCCceEEEEEEEEec
Q 047026 560 IKGDNSMFLVQSRSGDPVCGVLYDYLRLEA 589 (596)
Q Consensus 560 ~~G~NtI~l~~~~g~s~~~~vmyD~IrLe~ 589 (596)
.+|.+.|+|....+.+.. -+-.|.++++.
T Consensus 112 ~~G~h~l~l~f~g~~~~~-~~nld~~~f~~ 140 (142)
T 1w9s_A 112 QPGTYDVYLVFKGSPEYD-LMNVNWFVFRA 140 (142)
T ss_dssp CSEEEEEEEEEESCTTSC-CCEEEEEEEEC
T ss_pred CCcEEEEEEEEECCCCcc-eEEEEEEEEEe
Confidence 689999999876432121 26678888874
No 32
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=81.47 E-value=1.8 Score=41.99 Aligned_cols=64 Identities=19% Similarity=0.305 Sum_probs=47.3
Q ss_pred CceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCccccc---ccceeE--EEECCc-cceEeCCccCCeeEE
Q 047026 291 ERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTES---KDYQFW--VQTDSK-GNFTVKNVVPGVYGL 360 (596)
Q Consensus 291 ~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~---~~yqyw--t~td~~-G~FtI~nVrpGtY~L 360 (596)
++=.|.|+|...+ ++|..+|.|=++.....|....+. .+...+ ..||++ |.|++.-|+||-|..
T Consensus 47 ~~l~v~G~V~D~~------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~ 116 (200)
T 3t63_A 47 EHILLLGQVYDGN------GHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNN 116 (200)
T ss_dssp CEEEEEECEECTT------SCBCSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEEECCCCEEC
T ss_pred CEEEEEEEEECCC------CCCCCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEEEECCcCcCC
Confidence 4678999998765 899999999997766656333211 123333 568998 999999999999974
No 33
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=81.36 E-value=1.7 Score=44.27 Aligned_cols=63 Identities=16% Similarity=0.242 Sum_probs=46.7
Q ss_pred ceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCccccc---ccceeE--EEECCccceEeCCccCCeeEE
Q 047026 292 RGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTES---KDYQFW--VQTDSKGNFTVKNVVPGVYGL 360 (596)
Q Consensus 292 RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~---~~yqyw--t~td~~G~FtI~nVrpGtY~L 360 (596)
+=.|.|+|...+ +.|..+|.|=++.....|....+. .+...+ ..||++|.|.|.-|+||-|-+
T Consensus 131 pl~l~G~V~D~~------G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~TI~Pg~Yp~ 198 (280)
T 3hhy_A 131 PLVFSGQVTDLD------GNGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQI 198 (280)
T ss_dssp EEEEEEEEECTT------SCBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEEECCC------CCCCCCcEEEEEecCCCCCCCCCCCCCCCCcceEEEEeCCCceEEEEEECCcCcCC
Confidence 458999998765 899999999998766666433211 112223 568999999999999999964
No 34
>2v4v_A GH59 galactosidase; hydrolase, family 6 carbohydrate binding module, CCCBM6; HET: XYP; 1.50A {Clostridium cellulolyticum}
Probab=81.29 E-value=11 Score=33.14 Aligned_cols=79 Identities=16% Similarity=0.193 Sum_probs=46.3
Q ss_pred ceEEEEEEEecc-CCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeeccEEEEEEeecCC
Q 047026 497 GTYNLRLAIASA-TRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDNSMFLVQSRSGD 575 (596)
Q Consensus 497 ~~~tLriala~a-~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~s 575 (596)
+.+++.+-+|++ +++.++|++++.... +..+-.++.. +--..|...+.+|+ +.+|...|+|....++
T Consensus 49 G~~~~~~rvas~~~gg~ievrlds~~G~--~~g~~~v~~T------ggw~~~~t~~~~v~---~~~G~h~l~l~f~g~~- 116 (129)
T 2v4v_A 49 GVGGFQARVASATSGGNIEIRLDSSTGT--LIGTCPVAGT------GDWQTYTDAKCTVS---GVTGKHDVYLVFKGDS- 116 (129)
T ss_dssp CCCEEEEEEEESSCCEEEEEEESSTTSC--EEEEEEECCC------SEEEEEEEEEEECC---CCEEEEEEEEEEECSS-
T ss_pred CeEEEEEEEEcCCCCcEEEEEECCCCCe--EEEEEEecCC------CCCceeEEEEEEEc---cCCceEEEEEEEECCC-
Confidence 455555555664 567999999976432 2222233321 11124555555553 5799999999976543
Q ss_pred CCceEEEEEEEEe
Q 047026 576 PVCGVLYDYLRLE 588 (596)
Q Consensus 576 ~~~~vmyD~IrLe 588 (596)
+. -+-.|.++++
T Consensus 117 ~~-~~nld~~~f~ 128 (129)
T 2v4v_A 117 GY-LFNLNWFTFS 128 (129)
T ss_dssp SC-CCEEEEEEEE
T ss_pred Cc-eEEEEEEEEE
Confidence 32 2667777775
No 35
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=80.96 E-value=11 Score=34.20 Aligned_cols=89 Identities=15% Similarity=0.204 Sum_probs=51.9
Q ss_pred CccEEEEEE-eCCCccceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCcee
Q 047026 482 PTTWTIKFH-LDSIIKGTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLI 560 (596)
Q Consensus 482 ~~~w~I~F~-L~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~ 560 (596)
++.| |.|+ ++-. .+.+++.+-+|++.++.++|++++.... +..+-.++..- + --.|...+.+|. +.
T Consensus 54 ~G~w-i~y~~vdf~-~G~~~~~~rvas~~gg~ievrlds~~G~--~lgt~~v~~Tg-----g-w~~w~tv~~~v~---~~ 120 (145)
T 1uy4_A 54 NGNT-VTYSNIDFG-SGATGFSATVATEVNTSIQIRSDSPTGT--LLGTLYVSSTG-----S-WNTYNTVSTNIS---KI 120 (145)
T ss_dssp TTCE-EEEEEEECT-TCEEEEEEEEECSSCEEEEEEESSTTSC--EEEEEEECCCS-----S-TTCCEEEEEEEE---EE
T ss_pred CCCE-EEEEEEEcC-CCCEEEEEEEEeCCCcEEEEEECCCCCc--EEEEEEecCCC-----C-CcccEEEEEEec---CC
Confidence 4555 4455 3221 2566666666666678999999976432 22222332211 1 113555555554 36
Q ss_pred eeccEEEEEEeecCCCCceEEEEEEEEec
Q 047026 561 KGDNSMFLVQSRSGDPVCGVLYDYLRLEA 589 (596)
Q Consensus 561 ~G~NtI~l~~~~g~s~~~~vmyD~IrLe~ 589 (596)
+|...|+|.. +| ++-.|.++++.
T Consensus 121 ~G~h~lyl~f-~g-----~~nl~~~~F~~ 143 (145)
T 1uy4_A 121 TGVHDIVLVF-SG-----PVNVDNFIFSR 143 (145)
T ss_dssp CSEEEEEEEE-SS-----CCEEEEEEEEE
T ss_pred CceEEEEEEE-eC-----CeEEEEEEEEe
Confidence 8999999986 44 26778888764
No 36
>1od3_A Putative xylanase; hydrolase, carbohydrate binding module, beta-sandwich, laminaribiose; HET: BGC; 1.0A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1nae_A* 1o8s_A* 1o8p_A
Probab=78.82 E-value=13 Score=34.78 Aligned_cols=89 Identities=15% Similarity=0.204 Sum_probs=53.7
Q ss_pred CccEEEEEE-eCCCccceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCcee
Q 047026 482 PTTWTIKFH-LDSIIKGTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLI 560 (596)
Q Consensus 482 ~~~w~I~F~-L~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~ 560 (596)
++.| |.|+ ++-. .+.+++.+-+|++.++.++|++++.+.. +..+-.++...+ --.|...+.+|+ +.
T Consensus 76 ~G~w-l~y~~vdfg-~G~~~~~~rvas~~~G~ievrlds~~G~--~lgt~~vp~Tgg------w~~w~tvt~~v~---~~ 142 (168)
T 1od3_A 76 NGYS-TTYKNIDFG-DGATSVTARVATQNATTIQVRLGSPSGT--LLGTIYVGSTGS------FDTYRDVSATIS---NT 142 (168)
T ss_dssp TTCE-EEEEEEECT-TCEEEEEEEEECSSCEEEEEEESSTTSC--EEEEEEECCCSS------TTCCEEEEEEEE---EE
T ss_pred CCCE-EEEEeEEeC-CCcEEEEEEEEcCCCcEEEEEECCCCCc--EEEEEEeCCCCC------CcccEEEEEEEc---CC
Confidence 4455 5555 4322 3677777777776678999999976532 222222322110 113556666664 46
Q ss_pred eeccEEEEEEeecCCCCceEEEEEEEEec
Q 047026 561 KGDNSMFLVQSRSGDPVCGVLYDYLRLEA 589 (596)
Q Consensus 561 ~G~NtI~l~~~~g~s~~~~vmyD~IrLe~ 589 (596)
+|...|+|... | ++-.|.++++.
T Consensus 143 ~G~hdLylvf~-G-----~~nldw~~F~~ 165 (168)
T 1od3_A 143 AGVKDIVLVFS-G-----PVNVDWFVFSK 165 (168)
T ss_dssp CSEEEEEEEES-S-----CCEEEEEEEEC
T ss_pred CcEEEEEEEEE-C-----CcEEEEEEEEe
Confidence 89999999764 4 36778888874
No 37
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=78.44 E-value=9.4 Score=31.95 Aligned_cols=51 Identities=18% Similarity=0.173 Sum_probs=35.9
Q ss_pred cCCCCcceeEEEEcCCCCCCCcccccccceeE----EEECCccceEeCCccCCeeEEEEEEcceee
Q 047026 308 SSLIPAKYAYIGLSSARTEGGWQTESKDYQFW----VQTDSKGNFTVKNVVPGVYGLHGWVPGFIG 369 (596)
Q Consensus 308 ~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqyw----t~td~~G~FtI~nVrpGtY~L~a~~~G~~G 369 (596)
.+++|+.+|.|-.. +... +.|. ..||++|.|++. +=-|+-.+.|...|..|
T Consensus 10 ~~GkPV~gA~Vefe-------~yNy---ae~~~~~~~~TD~~G~~s~~-~G~Gd~~v~A~k~G~~g 64 (82)
T 3e8v_A 10 AEGQPVADATVEFK-------VYNY---AEFYTVATKHTDRSGHASLT-AGKGDMLVWASKDGRFG 64 (82)
T ss_dssp TTSCBCTTCEEEEE-------EEET---TEEEEEEEEECCTTSEEEEE-CCSEEEEEEEEETTEEE
T ss_pred CCCCCCCCCEEEEE-------EEEc---hheeEEEEEEECCCceEEEE-EcCCceEEEeccCCEEE
Confidence 34899999998875 3221 3333 357999999995 55677777778887655
No 38
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=76.75 E-value=2.4 Score=38.37 Aligned_cols=64 Identities=13% Similarity=0.124 Sum_probs=43.8
Q ss_pred CceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceE----eCCccCCeeEEEEEE
Q 047026 291 ERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFT----VKNVVPGVYGLHGWV 364 (596)
Q Consensus 291 ~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~Ft----I~nVrpGtY~L~a~~ 364 (596)
.++.++=.|+..- .|+||.++.|-|......++|+ .-.-+.||++|+.. -..+.+|.|+|..-.
T Consensus 8 ~~~~LStHVLDt~-----~G~PAagv~V~L~~~~~~~~w~-----~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~t 75 (127)
T 2h4e_A 8 SKXPLMVKVLDAV-----RGSPAINVAVHVFRKAADDTWE-----PFASGKTSESGELHGLTTEEEFVEGIYKVEIDT 75 (127)
T ss_dssp --CCEEEEEEETT-----TTEECTTCEEEEEEECTTSCEE-----EEEEEECCTTSEECCSCCTTTCCSEEEEEEECH
T ss_pred CcCCEEEEEecCC-----CcCCCCCCEEEEEEeCCCCCeE-----EEEEeecCCCccccCcCCCCCccceEEEEEEEh
Confidence 4677888877653 4899999999996432122353 23346789999872 345889999999865
No 39
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=74.96 E-value=3.3 Score=49.04 Aligned_cols=69 Identities=23% Similarity=0.256 Sum_probs=43.8
Q ss_pred EEEEEeCCCccceEEEEEEEeccC--C--CeeEEEEcCccCCccccccc-ccCCCCeeeeeeEEEeeEEEEEEeecCce-
Q 047026 486 TIKFHLDSIIKGTYNLRLAIASAT--R--SDLEIFVNYIDQGHLVYQEM-NLGMDNTVCRHGIHGLYQLFSIHVSSLLL- 559 (596)
Q Consensus 486 ~I~F~L~~~~~~~~tLriala~a~--~--~~~~V~vN~~~~~~p~~~~~-~~~~d~~i~R~~~~G~~~~~~~~ipa~~L- 559 (596)
+=.|+|+........|.|-+..-. . .+-+|.|||+.++. .+ .++ ..-.|.||+++|
T Consensus 856 r~~f~L~~p~g~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGr----y~~~~~--------------pqr~y~VP~giLn 917 (971)
T 1tg7_A 856 STSFDLDLPSGYDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGK----YVNNIG--------------PQTSFPVPEGILN 917 (971)
T ss_dssp EEEEECCCCTTEECCEEEEECCCCSSCCCEEEEEEETTEEEEE----EETTTC--------------SCCEEEECBTTBC
T ss_pred EEEEeccCCCCCCceEEEEcCCCCCCCccceEEEEECCEEEee----ecCCCC--------------CCEEEECCHHHhC
Confidence 457887654322223433332211 1 48999999998762 11 111 234689999999
Q ss_pred eeeccEEEEEEee
Q 047026 560 IKGDNSMFLVQSR 572 (596)
Q Consensus 560 ~~G~NtI~l~~~~ 572 (596)
++|.|+|.|++..
T Consensus 918 ~~G~N~i~vrv~~ 930 (971)
T 1tg7_A 918 YHGTNWLALSLWA 930 (971)
T ss_dssp TTSEEEEEEEEEE
T ss_pred cCCccEEEEEEec
Confidence 9999999998865
No 40
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=74.20 E-value=3.3 Score=36.74 Aligned_cols=63 Identities=17% Similarity=0.204 Sum_probs=42.4
Q ss_pred CceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceE----eCCccCCeeEEEEEE
Q 047026 291 ERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFT----VKNVVPGVYGLHGWV 364 (596)
Q Consensus 291 ~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~Ft----I~nVrpGtY~L~a~~ 364 (596)
+|+.++=.|+..- .|+||.++.|-|..... ++|+ .---+.||++|+.. -..+.+|.|+|..-.
T Consensus 2 ~~~~lstHVLDt~-----~G~PAagv~V~L~~~~~-~~~~-----~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~t 68 (114)
T 2g2n_A 2 QQNILSVHILNQQ-----TGKPAADVTVTLEKKAD-NGWL-----QLNTAKTDKDGRIKALWPEQTATTGDYRVVFKT 68 (114)
T ss_dssp --CCEEEEEEETT-----TTEECCSCEEEEEEECS-SSEE-----EEEEEECCTTSEESCCSCSSCCCSEEEEEEECH
T ss_pred CCCCeEEEEecCC-----CcCCCCCCEEEEEEeCC-CCcE-----EEEEEecCCCCccccccCCCCCCceEEEEEEEh
Confidence 5677888877653 48999999999964221 1242 22345689999862 235788999999854
No 41
>1uxx_X Xylanase U; carbohydrate binding module, CBM6, xylopentaose binding, xylan degradation; HET: XYP; 1.6A {Clostridium thermocellum} SCOP: b.18.1.10 PDB: 1gmm_A*
Probab=73.91 E-value=40 Score=29.78 Aligned_cols=77 Identities=17% Similarity=0.311 Sum_probs=47.0
Q ss_pred ceEEEEEEEecc--CCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeeccEEEEEEeecC
Q 047026 497 GTYNLRLAIASA--TRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDNSMFLVQSRSG 574 (596)
Q Consensus 497 ~~~tLriala~a--~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~ 574 (596)
+.+++.+-+|++ .++.++|++++.... +..+-.++.. ++ --.|...+.+|+ +.+|...|+|.. +|
T Consensus 51 G~~~~~~rvas~~~~gg~ievr~ds~~G~--~~gt~~v~~T-----gg-w~~~~~~~~~v~---~~~G~h~l~l~f-~G- 117 (133)
T 1uxx_X 51 GANSFKARVASGADTPTNIQLRLGSPTGT--LIGTLTVAST-----GG-WNNYEEKSCSIT---NTTGQHDLYLVF-SG- 117 (133)
T ss_dssp CEEEEEEEEEECCSSCEEEEEEESSTTSE--EEEEEEECCC-----SE-EEEEEEEEEEEE---EECSEEEEEEEE-SS-
T ss_pred CcEEEEEEEEeCCCCCcEEEEEECCCCCc--EEEEEEeCCC-----CC-CceEEEEEEEEc---cCCcEEEEEEEE-EC-
Confidence 566666666664 356999999986432 2222333322 11 124555555554 468999999976 44
Q ss_pred CCCceEEEEEEEEecC
Q 047026 575 DPVCGVLYDYLRLEAP 590 (596)
Q Consensus 575 s~~~~vmyD~IrLe~p 590 (596)
.+-.|.++++.+
T Consensus 118 ----~~nl~~~~f~~~ 129 (133)
T 1uxx_X 118 ----PVNIDYFIFDSN 129 (133)
T ss_dssp ----CCEEEEEEEECC
T ss_pred ----CcEEEEEEEEcC
Confidence 367888888765
No 42
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=71.37 E-value=5.8 Score=42.73 Aligned_cols=66 Identities=21% Similarity=0.210 Sum_probs=45.0
Q ss_pred CceeEEEEEEee---ecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCeeEEEEEEc
Q 047026 291 ERGSATGRFFVQ---DKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGVYGLHGWVP 365 (596)
Q Consensus 291 ~RGtVsG~v~~~---D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGtY~L~a~~~ 365 (596)
+-++|.|.|-.- +........|..++.|-|..+. |. .---+.||++|.|.|.++.||+|++.+-.+
T Consensus 304 G~~~igg~Vw~D~n~nG~~D~~e~gl~gv~v~L~d~~--G~-------~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 304 GFGGFGGYVWFDKNNDGVQNDSNAAAAGITVNLLDPT--GI-------RLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp CEEEEEEEEEECTTSSSSSCCSSCBCTTCEEEEECTT--SC-------EEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred ceEEEccEEEEeCCCCCCcCcCCCCcCCeEEEEEcCC--CC-------EEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 446777876541 1111222357788999986432 22 123678999999999999999999988665
No 43
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=67.75 E-value=8 Score=44.06 Aligned_cols=77 Identities=18% Similarity=0.118 Sum_probs=53.6
Q ss_pred ccEEEEEEeCCCc-c---ceEEEEEEEecc----CCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEe
Q 047026 483 TTWTIKFHLDSII-K---GTYNLRLAIASA----TRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHV 554 (596)
Q Consensus 483 ~~w~I~F~L~~~~-~---~~~tLriala~a----~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~i 554 (596)
..-.|.|.+.... . ...+|.+..+-+ ..+++.|.|||+-+.. ..+.+.. .|....+++.|
T Consensus 318 ~~i~V~FrLPPDLfvw~~tga~L~L~YRYSp~l~~~S~L~VsLNgqfV~S-----lPL~~~~-------~g~~~~~~IpL 385 (707)
T 4hg6_B 318 FNRDIDFQLPDDWLLLASQKAQIGIDYGFAGGLPEGALLLVKVNGTTVRM-----LPLDRDA-------APVKPRLDIRF 385 (707)
T ss_dssp EEEEEEEECCSSCCCCSSCEEEEEECEEECSSCCTTCEEEEEETTEEEEE-----EESSSCC-------BSSCCCEEEEE
T ss_pred CCceeEEeCCCCeecccCCCceEEEEEecCCCCCCCCeEEEEECCEEEEE-----EEcCccc-------CCccceeEeec
Confidence 4568888888766 2 456666665553 4579999999986642 2222211 13456689999
Q ss_pred ecCceeeeccEEEEEEe
Q 047026 555 SSLLLIKGDNSMFLVQS 571 (596)
Q Consensus 555 pa~~L~~G~NtI~l~~~ 571 (596)
|+.+|+.|.|.|.|...
T Consensus 386 Pp~ll~~g~NqL~FeF~ 402 (707)
T 4hg6_B 386 PARLLHPGPNRLSFESV 402 (707)
T ss_dssp EGGGCCSSEEEEEEEEE
T ss_pred CHHHcCCCCceEEEEEE
Confidence 99999889999999864
No 44
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=67.04 E-value=1.2 Score=53.17 Aligned_cols=86 Identities=20% Similarity=0.254 Sum_probs=0.0
Q ss_pred EEEEEeCCCccceEEEEEEEeccC--CCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeec
Q 047026 486 TIKFHLDSIIKGTYNLRLAIASAT--RSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGD 563 (596)
Q Consensus 486 ~I~F~L~~~~~~~~tLriala~a~--~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 563 (596)
.|.|++....+|.|+|.|-.|... ...+.|.|||..... +..++.+ ++.. .+...++.| .|++|.
T Consensus 945 ~v~~~V~v~~aG~Y~l~iryan~~~~~r~~~l~VNG~~~~~----~v~~~~T-----g~W~-~w~~~~~~v---~L~aG~ 1011 (1032)
T 2vzs_A 945 SVEWTVTVPSAGTYDVVVRYANGTTTSRPLDFSVNGSISAS----GVAFGST-----GTWP-AWTTKTVRV---TLAAGV 1011 (1032)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEECCCCeEEEEEEEEEcCCCCCeeEEEEECCeEeee----EEEecCC-----CCCC-ccEEEEEEE---EECCCc
Confidence 466776544478999999988753 357999999976310 1111111 0110 133333433 389999
Q ss_pred cEEEEEEeecCCCCceEEEEEEEE
Q 047026 564 NSMFLVQSRSGDPVCGVLYDYLRL 587 (596)
Q Consensus 564 NtI~l~~~~g~s~~~~vmyD~IrL 587 (596)
|+|+|....+ ++ ++=.|+|.|
T Consensus 1012 NtI~~~~~~~-~g--~~niD~i~v 1032 (1032)
T 2vzs_A 1012 NKIKAVATTA-NG--GPNVDKITL 1032 (1032)
T ss_dssp ------------------------
T ss_pred eEEEEEEcCC-cC--ceEEEEEEC
Confidence 9999986422 22 466777754
No 45
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=66.87 E-value=3.3 Score=36.83 Aligned_cols=51 Identities=16% Similarity=0.180 Sum_probs=35.8
Q ss_pred CCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceE----eCCccCCeeEEEEEE
Q 047026 309 SLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFT----VKNVVPGVYGLHGWV 364 (596)
Q Consensus 309 ~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~Ft----I~nVrpGtY~L~a~~ 364 (596)
.|+||.++.|-|......++|+ .---+.||++|+.. -..+.+|.|+|..-.
T Consensus 12 ~G~PAagv~V~L~~~~~~~~~~-----~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~t 66 (115)
T 1f86_A 12 RGSPAINVAVHVFRKAADDTWE-----PFASGKTSESGELHGLTTEEEFVEGIYKVEIDT 66 (115)
T ss_dssp TTEECTTCEEEEEEECTTSCEE-----EEEEEECCTTSEECCSCCTTTCCSEEEEEEECH
T ss_pred CCCcCCCCEEEEEEcCCCCCcE-----EEEEeecCCCccccCcCCCCCCcceEEEEEEEh
Confidence 4899999999996432112353 23346789999872 345789999999854
No 46
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=66.67 E-value=3.1 Score=47.33 Aligned_cols=74 Identities=15% Similarity=0.130 Sum_probs=51.2
Q ss_pred ccEEEEEEeCCCccceEEEEEEEecc-----CCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecC
Q 047026 483 TTWTIKFHLDSIIKGTYNLRLAIASA-----TRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSL 557 (596)
Q Consensus 483 ~~w~I~F~L~~~~~~~~tLriala~a-----~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~ 557 (596)
..-.+.|.++. ....++|+|..+.+ ..+.++|.|||+.++. -.+..... -...+|+||+
T Consensus 61 ~~~~~~f~l~~-vVt~A~L~L~Yt~SPsLlPe~S~LkV~LNge~VGt-----lpl~~~~~---------~~~~~i~Ipp- 124 (707)
T 4hg6_B 61 ARAAFRLFLPT-EAVGGTLTLAQRSSIDILPESSQIIVRMNDQEIGR-----FTPRQFGA---------LGAVTMPLGE- 124 (707)
T ss_dssp SEEEEEEECSS-CCTTCCBBCEEECSSCCCBTTBEEEEEETTEEEEE-----ECCCCCSS---------CCCBCCCCCS-
T ss_pred CceeEEEEccc-hheeEEEEEEEeeCccccCccceEEEEECCEEEEE-----EecCCCCC---------ceeEEEecCh-
Confidence 34667788877 34556677777665 4578999999997752 11222111 2345899998
Q ss_pred ceeeeccEEEEEEee
Q 047026 558 LLIKGDNSMFLVQSR 572 (596)
Q Consensus 558 ~L~~G~NtI~l~~~~ 572 (596)
+|..|.|.|.|....
T Consensus 125 ~l~~gfN~L~fe~ig 139 (707)
T 4hg6_B 125 AVRAGDNLVTIEAQH 139 (707)
T ss_dssp SSCSSEEEEEEEEEC
T ss_pred HHcCCcceEEEEEcC
Confidence 899999999999764
No 47
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=66.28 E-value=4.8 Score=35.95 Aligned_cols=61 Identities=21% Similarity=0.251 Sum_probs=40.2
Q ss_pred eEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccce----EeCCccCCeeEEEEEE
Q 047026 294 SATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNF----TVKNVVPGVYGLHGWV 364 (596)
Q Consensus 294 tVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~F----tI~nVrpGtY~L~a~~ 364 (596)
.++=.|+.. ..|+||.++.|-|......++|+ .---+.||++|+. .-..+.+|.|+|..-.
T Consensus 3 ~lstHVLDt-----~~G~PAagv~V~L~~~~~~~~~~-----~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~t 67 (119)
T 1oo2_A 3 PLMVKILDA-----VKGTPAGSVALKVSQKTADGGWT-----QIATGVTDATGEIHNLITEQQFPAGVYRVEFDT 67 (119)
T ss_dssp SEEEEEEET-----TTTEECTTCEEEEEEECTTSCEE-----EEEEEECCTTSCCTTCSCGGGCCSEEEEEEECH
T ss_pred ceeEEEecC-----CCcCCCCCCEEEEEEeCCCCCcE-----EEEEEecCCCCcccCcCCCCCCCceEEEEEEEh
Confidence 345555544 34899999999996432112353 2334678999986 2335789999999865
No 48
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=65.63 E-value=6.6 Score=36.31 Aligned_cols=63 Identities=13% Similarity=0.129 Sum_probs=44.5
Q ss_pred ceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceE----eCCccCCeeEEEEEE
Q 047026 292 RGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFT----VKNVVPGVYGLHGWV 364 (596)
Q Consensus 292 RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~Ft----I~nVrpGtY~L~a~~ 364 (596)
|.-++=.|+.. ..|+||.++.|-|.....+++|+ .-.-.+||++|+.. -....+|+|+|....
T Consensus 29 k~PLTtHVLDt-----~~G~PA~gv~V~L~~~~~~~~~~-----~l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~t 95 (147)
T 4ank_A 29 KCPLMVKVLDA-----VRGSPAINVAVHVFRKAADDTWE-----PFASGKTSESGELHGLTTEEEFVEGIYKVEIDT 95 (147)
T ss_dssp -CCEEEEEEET-----TTTEECCSCEEEEEEECTTSCEE-----EEEEEECCTTSEECCSCCTTTCCSEEEEEEECH
T ss_pred CCCeEEEEEeC-----CCCcCCCCCEEEEEEECCCCCeE-----EEEEEEeCCCCCCCCCCCccccCCceEEEEEEH
Confidence 56688887765 34899999999997544444563 33446799999864 235678999998765
No 49
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=59.81 E-value=10 Score=42.56 Aligned_cols=65 Identities=22% Similarity=0.354 Sum_probs=42.4
Q ss_pred EEEEEEeCCCccceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeecc
Q 047026 485 WTIKFHLDSIIKGTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDN 564 (596)
Q Consensus 485 w~I~F~L~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~N 564 (596)
.+-.|++++. +. .+|-...-+.=+|.|||.++++ -+.++- ..++| ||+++|++|.|
T Consensus 511 yk~~f~~~~~--~D----t~Ld~~g~gKG~vwVNG~nlGR----YW~~GP-----------qqtlY---vP~~~Lk~g~N 566 (612)
T 3d3a_A 511 YRSTFNLNEL--GD----TFLNMMNWSKGMVWVNGHAIGR----YWEIGP-----------QQTLY---VPGCWLKKGEN 566 (612)
T ss_dssp EEEEEEESSC--CB----EEEECTTCCEEEEEETTEEEEE----EETTCS-----------CCEEE---ECGGGCCSEEE
T ss_pred EEEEEECCCC--Cc----EEEecCCCCcEEEEECCEeEEe----EEecCC-----------EEEEE---ecHHHcCCCCc
Confidence 4566777642 22 3344455677899999999874 233221 22444 99999999999
Q ss_pred EEEEEEeec
Q 047026 565 SMFLVQSRS 573 (596)
Q Consensus 565 tI~l~~~~g 573 (596)
+|.|==..+
T Consensus 567 ~ivvfE~~~ 575 (612)
T 3d3a_A 567 EIIILDMAG 575 (612)
T ss_dssp EEEEEESSC
T ss_pred EEEEEEEcC
Confidence 987754444
No 50
>3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A*
Probab=59.01 E-value=51 Score=35.25 Aligned_cols=81 Identities=17% Similarity=0.281 Sum_probs=47.7
Q ss_pred cceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeeccEEEEEEeecCC
Q 047026 496 KGTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDNSMFLVQSRSGD 575 (596)
Q Consensus 496 ~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~s 575 (596)
.+.++|.+.+|+.+++.++|++++.... +..+-.++.+. + -..+...+.+| . +.+|.+.|+|....+.+
T Consensus 405 ~g~~~~~~~vas~~~g~ievr~~s~~G~--~~g~~~v~~tg-----g-~~~w~~~~~~v--~-~~~G~h~ly~~f~g~~~ 473 (487)
T 3c7f_A 405 GGARSFKANVASTLGGKIEVRLDSADGK--LVGTLNVPSTG-----G-AQTWREIETAV--S-GATGVHKVFFVFTGTGT 473 (487)
T ss_dssp TCEEEEEEEEEESSCEEEEEEESSTTSC--EEEEEEECCCS-----E-EEEEEEEEEEC--C-SCCSEEEEEEEEECSCS
T ss_pred CCccEEEEEEEeCCCcEEEEEECCCCCc--EEEEEEeCCCC-----C-CcccEEEEEEE--c-CCCceEEEEEEEECCCC
Confidence 3566666666667778999999876542 22233333211 1 12345555555 3 35899999998754321
Q ss_pred CCceEEEEEEEEe
Q 047026 576 PVCGVLYDYLRLE 588 (596)
Q Consensus 576 ~~~~vmyD~IrLe 588 (596)
. .-+-+|.++++
T Consensus 474 ~-~l~~~~~~~f~ 485 (487)
T 3c7f_A 474 G-NLFNFDYWQFT 485 (487)
T ss_dssp S-CCCEEEEEEEE
T ss_pred c-ceEEEEEEEEE
Confidence 1 13667888776
No 51
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=58.46 E-value=14 Score=32.89 Aligned_cols=59 Identities=15% Similarity=0.161 Sum_probs=41.5
Q ss_pred CceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEe---CCccCCeeEEEEEE
Q 047026 291 ERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTV---KNVVPGVYGLHGWV 364 (596)
Q Consensus 291 ~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI---~nVrpGtY~L~a~~ 364 (596)
+-+.++=.|+..- .|+||.++.|-|.... ..-.-+.||+||+... ..+.+|+|+|..-.
T Consensus 8 ~M~~lstHVLDt~-----~G~PAagv~V~L~~~~----------~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~t 69 (116)
T 3qva_A 8 HMSTLSTHILDIS-----TGTPAEGVTVSLSREG----------ETLANLVTNAQGRIATFSAAPLPAGRYCLTAET 69 (116)
T ss_dssp -CBCEEEEEEETT-----TTEECTTCEEEEEETT----------EEEEEEECCTTSEECCSCSSCBCSSEEEEEECH
T ss_pred ccCCeeeEEeecC-----CCcCCCCCEEEEEEcc----------EeEEEeccCCCCCccccccccCCCceEEEEEeH
Confidence 3466887777653 4899999999995221 1233467899998642 45789999999865
No 52
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=58.31 E-value=9.4 Score=39.76 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=34.4
Q ss_pred CCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCeeEEEEEE
Q 047026 309 SLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGVYGLHGWV 364 (596)
Q Consensus 309 ~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGtY~L~a~~ 364 (596)
++.+..+|...|.... +...+--..||++|.++|.++++|+|.|.=..
T Consensus 18 ~~~~L~GA~F~l~~~~--------g~~~~~~~tTd~~G~~~~~~L~~G~Y~~~Et~ 65 (355)
T 3kpt_A 18 NEKAMAGAVFSLFKKD--------GTEVKKELATDANGHIRVQGLEYGEYYFQETK 65 (355)
T ss_dssp GGCBCCSCEEEEEETT--------SCEEEEEEECCTTSEEEEEEEESEEEEEEEEE
T ss_pred CCCCcCCcEEEEEECC--------CCEEEEEEEECCCCeEEECCcCCceEEEEEEe
Confidence 4678888888886322 11111234689999999999999999987654
No 53
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=55.02 E-value=17 Score=43.17 Aligned_cols=68 Identities=24% Similarity=0.204 Sum_probs=42.5
Q ss_pred EEEEeCCC-ccceEEEEEEEeccC---CCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCcee-e
Q 047026 487 IKFHLDSI-IKGTYNLRLAIASAT---RSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLI-K 561 (596)
Q Consensus 487 I~F~L~~~-~~~~~tLriala~a~---~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~-~ 561 (596)
=.|+|+-. ..-...|.+-+.... .-|.|+.|||+..+.=+ +.+| -..+|.||.+.|. .
T Consensus 889 t~f~LdlP~~g~Dvpl~~~f~~~~~~~~yRa~lfVNG~q~Gkyv---~~iG--------------PQt~FpvP~GILn~~ 951 (1003)
T 3og2_A 889 AKLPLHLPAQEYDIPLSFVFDNATAAAPYRALLYVNGFQYGKYV---SNIG--------------PQTEFPVPEGILDYN 951 (1003)
T ss_dssp EEEEEECCTTTEECCEEEEECCCSSCCCEEEEEEETTEEEEEEE---TTTC--------------CCCEEEECBTTBCTE
T ss_pred EEeecCCCcccCceeEEEEECCCCCCcceEEEEEEeceeeeeec---CCCC--------------CcceecCCcccccCC
Confidence 35666432 111233444443332 35999999998765211 1222 2457999999998 8
Q ss_pred eccEEEEEEe
Q 047026 562 GDNSMFLVQS 571 (596)
Q Consensus 562 G~NtI~l~~~ 571 (596)
|+|+|-|++=
T Consensus 952 G~NtialalW 961 (1003)
T 3og2_A 952 GDNWIGVALW 961 (1003)
T ss_dssp EEEEEEEEEE
T ss_pred CcceEEEEEE
Confidence 9999999983
No 54
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=54.09 E-value=12 Score=42.46 Aligned_cols=66 Identities=18% Similarity=0.216 Sum_probs=45.5
Q ss_pred EEEEEeCCCcc-ceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeee-c
Q 047026 486 TIKFHLDSIIK-GTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKG-D 563 (596)
Q Consensus 486 ~I~F~L~~~~~-~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G-~ 563 (596)
+=.|.+++... ....|++..+. ....|.|||..++. -.|-+..++|+|+ ..|+.| +
T Consensus 65 r~~f~~p~~~~~~~~~L~f~gv~---~~a~V~vNG~~vg~------------------~~~g~~~f~~dIt-~~l~~G~~ 122 (692)
T 3fn9_A 65 RKTQFFPHDLEGKRVFLRFEGVG---ACAEVYVNGKLAGT------------------HKGGYSAFACEIG-TALKLGAE 122 (692)
T ss_dssp EEEEEECGGGTTCEEEEEESCCB---SEEEEEETTEEEEE------------------EECTTSCEEEECG-GGCCTTEE
T ss_pred EEEEEECchhCCCeEEEEECCcc---EeeEEEECCEEeee------------------EcCCcceEEEECh-HhcCCCCc
Confidence 44688876543 34555554433 45789999986531 1234567889998 788999 8
Q ss_pred cEEEEEEeec
Q 047026 564 NSMFLVQSRS 573 (596)
Q Consensus 564 NtI~l~~~~g 573 (596)
|+|.+.+.+.
T Consensus 123 N~l~V~v~~~ 132 (692)
T 3fn9_A 123 NEIIVKADNK 132 (692)
T ss_dssp EEEEEEEECC
T ss_pred eEEEEEEECC
Confidence 9999999764
No 55
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=52.83 E-value=26 Score=41.03 Aligned_cols=69 Identities=16% Similarity=0.117 Sum_probs=44.5
Q ss_pred CCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCeeEEEEEE--cceeeeEeeeeEEEEeCCCeee
Q 047026 309 SLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGVYGLHGWV--PGFIGDYLDKALVTISAGSQTE 386 (596)
Q Consensus 309 ~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGtY~L~a~~--~G~~G~~~~~~~VtV~aG~t~~ 386 (596)
++.+.++|..-|..... .....-..||++|.++|.+++||+|+|.=-. .|+.-+ ...-.|+|++...+.
T Consensus 58 ~~~~L~GA~F~l~~~~~--------~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~l~-~~~~~v~v~~~g~~~ 128 (893)
T 2ww8_A 58 GGALLGDAVFELKNNTD--------GTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPS-TKQWTVEVEKNGRTT 128 (893)
T ss_dssp TTCBCCCCEEEEEETTT--------CCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCCC-CCEEEEEECTTCCEE
T ss_pred CCCccCCCEEEEEECCC--------CeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCceecC-CccEEEEECCCceEE
Confidence 47888999888764331 0112224579999999999999999998775 443211 123347776554433
No 56
>1yua_A Topoisomerase I; gene-regulating protein, DNA binding protein; NMR {Escherichia coli} SCOP: g.41.3.3 g.41.3.3
Probab=49.31 E-value=6.7 Score=34.66 Aligned_cols=86 Identities=27% Similarity=0.393 Sum_probs=46.4
Q ss_pred eeEEEEEecCcceeEEEEee-cCCCCCCCCCCCceEEE-EEcCCCCCccceecccccccCCCCCCCCCCCcceeeeeceE
Q 047026 69 VDIRYILRSGVSGFHCYSIY-ERPPGCRAFDLAQTRLA-FKLRRDKFHYMAITDAKQRIMPLPEDLLPGRGKQLIVPESV 146 (596)
Q Consensus 69 l~~~~v~r~G~sgiY~y~~~-~~~~~~p~~~lge~R~v-~Rl~~~~f~~~~~~d~r~~~~P~~~d~~~~~~~~l~~~eav 146 (596)
.|-|||||+|-+|+++.+.. -...+..+.-+.||+-. -|| ..+|.+++. .|.. | ..|.+. .|
T Consensus 23 ~d~~fVLRDGAsGlFlAAs~FPK~RETRaP~V~EL~~~~d~l-~~K~~yL~~-------AP~~-D---~~Gn~t----iv 86 (122)
T 1yua_A 23 SDAYFVLRDGAAGVFLAANTFPKSRETRAPLVEELYRFRDRL-PEKLRYLAD-------APQQ-D---PEGNKT----MV 86 (122)
T ss_dssp SSCEEEEECCSSSCEEEETTTTSCCCCCSCBHHHHHHTTTTC-CSTTHHHHH-------SCSS-C---TTCCCE----EE
T ss_pred cCCEEEeeCCchhhhhhhccCCccccccchHHHHHHHHHHhc-CHHHHHhhc-------CCcc-C---CCCCee----eE
Confidence 38899999999999998752 11111234445555421 222 345666532 2322 2 234322 23
Q ss_pred EeecCCCCCCCceEeeceecccccccCceEEEEe
Q 047026 147 LLVNPINPDLKGEVDDKYQYSMDNKDGGLHGWIS 180 (596)
Q Consensus 147 ~l~~~~~~~~~G~~~sKY~~s~~~~D~~vhG~~s 180 (596)
.+.. .+|=||-..-+|-+.-||.+
T Consensus 87 rfSR----------KtKeqYV~sE~~GKaTgW~a 110 (122)
T 1yua_A 87 RFSR----------KTKQQYVSSEKDGKATGWSA 110 (122)
T ss_dssp EEET----------TTTEEEEEECCTTSCCCCCE
T ss_pred Eeec----------cchhheeeeccCCcccceEE
Confidence 3331 25666666667888888843
No 57
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=48.43 E-value=8.8 Score=43.01 Aligned_cols=43 Identities=23% Similarity=0.343 Sum_probs=29.3
Q ss_pred CCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeeccEEEEE
Q 047026 509 TRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDNSMFLV 569 (596)
Q Consensus 509 ~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~ 569 (596)
.-+.=.|.|||.++++ . +.+|- ..++| ||+.+|++|.|+|.+=
T Consensus 527 gwgKG~v~VNG~nLGR-Y---W~~GP-----------Q~tLY---vP~~~Lk~G~NeIvvf 569 (595)
T 4e8d_A 527 EFGKGVAFVNGQNLGR-F---WNVGP-----------TLSLY---IPHSYLKEGANRIIIF 569 (595)
T ss_dssp TCCEEEEEETTEEEEE-E---ETTCS-----------BCEEE---ECGGGSCSEEEEEEEE
T ss_pred CCceEEEEECCeeeec-c---cCCCC-----------eEEEE---ecHHHhCcCCceEEEE
Confidence 3456689999998874 2 22221 12444 9999999999987653
No 58
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=48.34 E-value=9.7 Score=34.85 Aligned_cols=64 Identities=16% Similarity=0.194 Sum_probs=43.2
Q ss_pred ceeEEEEEEeeecccccCCCCcceeEEEEcCCCC-CCCcccccccceeEEEECCccceE--e--CCccCCeeEEEEEEc
Q 047026 292 RGSATGRFFVQDKFVSSSLIPAKYAYIGLSSART-EGGWQTESKDYQFWVQTDSKGNFT--V--KNVVPGVYGLHGWVP 365 (596)
Q Consensus 292 RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~-~g~wq~~~~~yqywt~td~~G~Ft--I--~nVrpGtY~L~a~~~ 365 (596)
++.++=.|+..- .|+||.++.|-|..... .+.|+ .-.-+.||++|+.. + ..+.+|+|+|..-..
T Consensus 25 ~~~LTtHVLDt~-----~G~PAagv~V~L~~~~~~~~~w~-----~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg 93 (138)
T 3iwv_A 25 LSPLSTHVLNIA-----QGVPGANMTIVLHRLDPVSSAWN-----ILTTGITNDDGRCPGLITKENFIAGVYKMRFETG 93 (138)
T ss_dssp -CCEECCEEETT-----TTEECTTCEEEEEEECSSSCCEE-----EEEEEECCTTSCCTTSSCTTTCCSEEEEEEECHH
T ss_pred CCCceEEEeecC-----CccCCCCCEEEEEEECCCCCCcE-----EEEEEecCCCCCcCCccCcccCCCceEEEEEehH
Confidence 577887777553 48999999999964321 12342 22335799999864 2 357899999998653
No 59
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=47.69 E-value=18 Score=35.32 Aligned_cols=47 Identities=23% Similarity=0.353 Sum_probs=33.0
Q ss_pred EEECCccceEeCCccCCeeEEEEEE--cceeeeEeeeeEEEEeCCCeeee
Q 047026 340 VQTDSKGNFTVKNVVPGVYGLHGWV--PGFIGDYLDKALVTISAGSQTEL 387 (596)
Q Consensus 340 t~td~~G~FtI~nVrpGtY~L~a~~--~G~~G~~~~~~~VtV~aG~t~~l 387 (596)
..||++|.|+|.++++|+|.|.=-. .|+.= -...-.++|++++++.+
T Consensus 176 ~~Td~~G~~~~~~L~~G~Y~l~EtkAP~GY~l-~~~~~~f~i~~~~~~~~ 224 (239)
T 2pz4_A 176 LETDSSGHIRISGLIHGDYVLKEIETQSGYQI-GQAETAVTIEKSKTVTV 224 (239)
T ss_dssp EECCTTSEEEEEEEESEEEEEEEEECCTTBCC-CCSEEEEEECTTSEEEE
T ss_pred EEECCCCeEEECCCCCceEEEEEEECCCCcCc-CCccEEEEEeCCCeEEE
Confidence 3589999999999999999987653 33320 01234588888886554
No 60
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=46.31 E-value=27 Score=30.99 Aligned_cols=45 Identities=22% Similarity=0.303 Sum_probs=30.9
Q ss_pred CCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCeeEEEEEE
Q 047026 309 SLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGVYGLHGWV 364 (596)
Q Consensus 309 ~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGtY~L~a~~ 364 (596)
++.+..+|..-|.... | +-.+=|+ ++|.++|.+++||+|+|.=-.
T Consensus 38 ~g~~L~GA~F~l~~~~--g------~~v~~~~---sdG~~~~~~L~~G~Y~l~Etk 82 (121)
T 2x5p_A 38 DGKELAGATMELRDSS--G------KTISTWI---SDGQVKDFYLMPGKYTFVETA 82 (121)
T ss_dssp TCCBCCCCEEEEECTT--S------CEEEEEE---CCSSCEEEEECSEEEEEEEEE
T ss_pred CCCCcCCCEEEEEECC--C------CEEEEEE---eCCEEEEcccCCcEEEEEEEe
Confidence 3677888888776322 1 1112244 479999999999999997653
No 61
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=44.39 E-value=23 Score=39.47 Aligned_cols=65 Identities=15% Similarity=0.181 Sum_probs=43.0
Q ss_pred EEEEEeCCCcc-ceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeecc
Q 047026 486 TIKFHLDSIIK-GTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDN 564 (596)
Q Consensus 486 ~I~F~L~~~~~-~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~N 564 (596)
+=.|.+++... ....|++..+. ..-.|.|||+.++. -.|-+.-++++|+ ..|+.|+|
T Consensus 72 ~~~f~~p~~~~~~~~~L~f~gv~---~~a~V~vNG~~vg~------------------~~~~~~p~~~dit-~~l~~G~n 129 (605)
T 3lpf_A 72 QREVFIPKGWAGQRIVLRFDAVT---HYGKVWVNNQEVME------------------HQGGYTPFEADVT-PYVIAGKS 129 (605)
T ss_dssp EEEEECCTTCSSCEEEEEESCCB---SEEEEEESSCEEEE------------------ECCSSSCEEEECG-GGCCTTSE
T ss_pred EEEEECCcccCCCEEEEEECCcc---eEEEEEECCEEEEE------------------EcCCCCcceeech-hhccCCCe
Confidence 34688876543 34455554333 45789999986531 1134567889998 78889986
Q ss_pred -EEEEEEee
Q 047026 565 -SMFLVQSR 572 (596)
Q Consensus 565 -tI~l~~~~ 572 (596)
+|++.+.+
T Consensus 130 n~l~V~v~n 138 (605)
T 3lpf_A 130 VRITVCVNN 138 (605)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 89998843
No 62
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=43.33 E-value=20 Score=40.21 Aligned_cols=65 Identities=22% Similarity=0.290 Sum_probs=44.2
Q ss_pred EEEEEeCCCcc-ceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeee-c
Q 047026 486 TIKFHLDSIIK-GTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKG-D 563 (596)
Q Consensus 486 ~I~F~L~~~~~-~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G-~ 563 (596)
+=.|++++... ....|++.-+ .....|.|||+.++. -.|-+..++|+|.. .|+.| +
T Consensus 54 r~~f~~p~~~~~~~~~L~f~gv---~~~a~V~vNG~~vg~------------------~~~~~~~~~~dit~-~l~~G~~ 111 (667)
T 3cmg_A 54 EKALYIRPEWKGKRLFLRFDGV---NSIADVFINRKHIGE------------------HRGGYGAFIFEITD-LVKYGEK 111 (667)
T ss_dssp EEEEECCGGGTTSEEEEEESCC---BSEEEEEETTEEEEE------------------EECSSSCEEEECTT-TSCTTSE
T ss_pred EEEEECCcccCCCEEEEEECCc---cceeEEEECCEEEee------------------ecCCcccEEEECCH-HHCCCCC
Confidence 44688876433 3455655433 345789999986531 12345678899986 68888 8
Q ss_pred cEEEEEEee
Q 047026 564 NSMFLVQSR 572 (596)
Q Consensus 564 NtI~l~~~~ 572 (596)
|+|.+.+.+
T Consensus 112 N~l~V~v~~ 120 (667)
T 3cmg_A 112 NSVLVRANN 120 (667)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEec
Confidence 999999865
No 63
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=42.63 E-value=17 Score=32.56 Aligned_cols=58 Identities=21% Similarity=0.180 Sum_probs=40.9
Q ss_pred eeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccce-----EeCCccCCeeEEEEEE
Q 047026 293 GSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNF-----TVKNVVPGVYGLHGWV 364 (596)
Q Consensus 293 GtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~F-----tI~nVrpGtY~L~a~~ 364 (596)
+.++=.|+.. ..|+||.++.|-|.... | ...--+.||+||+. .-..+++|.|+|..-.
T Consensus 9 ~~lstHVLDt-----~~G~PAagv~V~L~~~~----~-----~~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~t 71 (121)
T 2h0e_A 9 GKLTTHILDL-----TCGKPAANVKIGLKRLG----E-----SIMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFHA 71 (121)
T ss_dssp CEEECCEEET-----TTTEECTTCEEEEEETT----S-----CCCEEEECCTTSSCSSCSEEGGGCCSEEEEEEECH
T ss_pred CCeeEEEecC-----CCcCCCCCCEEEEEECC----c-----eEEEEEecCCCCCccCCcCCCCCcCceEEEEEEEh
Confidence 4566666554 34899999999996332 4 23445789999986 3346889999999754
No 64
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=42.54 E-value=73 Score=30.80 Aligned_cols=64 Identities=14% Similarity=0.166 Sum_probs=40.7
Q ss_pred ceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCeeEEEEEEcc
Q 047026 292 RGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGVYGLHGWVPG 366 (596)
Q Consensus 292 RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGtY~L~a~~~G 366 (596)
-++++|+|.-...-+. ....++-+-|.+.+ |. ..+.|.+. ...+|.|+ ..+=.|+|.|..-.+|
T Consensus 7 ~a~l~G~iv~tgE~i~---~~~~gv~i~l~e~g----~~--~~~~~~~~-v~qDGtf~-~~lF~G~Yki~~~~nG 70 (202)
T 4fxt_A 7 KATLTGKAIYDGEAVG---VRSGSSEFALFQDG----YA--LKGSIPVY-IAQDGSYS-VSLFNGDYKLVRMGNA 70 (202)
T ss_dssp EEEEEEEEEETTEECB---CCTTTEEEEEECCC----------CCEEEE-BCTTSEEE-EEEESEEEEEEEEETC
T ss_pred CceEEEEEEECCCEee---ecCCceEEEEEEcc----cC--CCCCeeEE-EcCCCcEE-EEEEcceeEEEECCCC
Confidence 4789999883321121 22446777776554 42 22445443 67899999 8999999999965556
No 65
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=42.28 E-value=29 Score=40.12 Aligned_cols=66 Identities=18% Similarity=0.177 Sum_probs=44.5
Q ss_pred EEEEEeCCCcc-ceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeecc
Q 047026 486 TIKFHLDSIIK-GTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDN 564 (596)
Q Consensus 486 ~I~F~L~~~~~-~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~N 564 (596)
+=.|++++... ....|++..+. ....|.|||+.++. -.|-+..++|+|+. .|+.|+|
T Consensus 71 rk~f~vp~~~~~~~v~L~f~gv~---~~a~V~vNG~~vG~------------------~~~g~~pf~~DIT~-~Lk~G~N 128 (801)
T 3gm8_A 71 RKTFTIPSKWKNKKVQILFEGVY---LNSEVWINGHWLGK------------------RPNGYISFVYDLTP-YLQEGKN 128 (801)
T ss_dssp EEEEECCSGGGSCEEEEEESCCB---SCEEEEETTEEEEE------------------ECCSSCCEEEECGG-GCCSSEE
T ss_pred EEEEEcCcccCCCEEEEEECccc---eEEEEEECCEEeec------------------ccCCcccEEEECcH-hccCCCc
Confidence 44688876543 34555554333 45789999986541 01345678899976 5789999
Q ss_pred EEEEEEeec
Q 047026 565 SMFLVQSRS 573 (596)
Q Consensus 565 tI~l~~~~g 573 (596)
+|.+.+.+.
T Consensus 129 ~L~V~V~n~ 137 (801)
T 3gm8_A 129 QIAVKVDHS 137 (801)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEECC
Confidence 999999754
No 66
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=41.98 E-value=28 Score=30.76 Aligned_cols=51 Identities=29% Similarity=0.227 Sum_probs=30.7
Q ss_pred CceeEEEEEEeeecccccCCCCcc--eeEEEEcCCCCCCCcccccccceeEEEECCccceEeC
Q 047026 291 ERGSATGRFFVQDKFVSSSLIPAK--YAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVK 351 (596)
Q Consensus 291 ~RGtVsG~v~~~D~~~~~~~~pa~--~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~ 351 (596)
|--.|+|+|.=. ++||+ ++-|.|...... -.+....-=-+.||++|+|+|.
T Consensus 3 qsV~V~G~L~C~-------~~Pa~~~~V~V~L~d~~~~---~~d~Ddll~~~~Td~~G~F~l~ 55 (117)
T 3uaf_A 3 SCLMATGVLKCP-------TDPEAVKKVHIDLWDAAAA---AAESDDLMGRTWSDRNGNFQVT 55 (117)
T ss_dssp EEEEEEEEEECT-------TCGGGGSSCEEEEEEHHHH---HTTSCCEEEEEECCTTSEEEEE
T ss_pred EEEEEEEEEEeC-------CccCCCCCEEEEEEecccc---cCCchHhheeeEECCCCEEEEE
Confidence 445799999875 47876 678888531000 0011112123678999999986
No 67
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=41.32 E-value=22 Score=41.20 Aligned_cols=63 Identities=14% Similarity=0.231 Sum_probs=43.2
Q ss_pred EEEEeCCCc--cceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeecc
Q 047026 487 IKFHLDSII--KGTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDN 564 (596)
Q Consensus 487 I~F~L~~~~--~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~N 564 (596)
=.|++++.. .....|++..+. ..-.|.|||+.++. -.|-+..++|+|+. .|+.|+|
T Consensus 70 ~~f~~p~~~~~~~~~~L~f~gv~---~~a~V~vNG~~vg~------------------~~~~~~~~~~dIt~-~l~~G~N 127 (848)
T 2je8_A 70 TSFIVSEEQLNRDGIQLIFEGLD---TYADVYLNGSLLLK------------------ADNMFVGYTLPVKS-VLRKGEN 127 (848)
T ss_dssp EEEEECHHHHTSSEEEEEESCCB---SEEEEEETTEEEEE------------------ECBTTCCEEEECGG-GCCSEEE
T ss_pred EEEEcChhhcCCCeEEEEECCCC---ceeEEEECCEEecc------------------ccCCCCCEEEcChH-hhcCCCc
Confidence 358877542 234556655433 45789999986541 11446778999987 7889999
Q ss_pred EEEEEEe
Q 047026 565 SMFLVQS 571 (596)
Q Consensus 565 tI~l~~~ 571 (596)
+|.+.+.
T Consensus 128 ~L~V~v~ 134 (848)
T 2je8_A 128 HLYIYFH 134 (848)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999984
No 68
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=40.10 E-value=26 Score=41.71 Aligned_cols=64 Identities=20% Similarity=0.093 Sum_probs=43.9
Q ss_pred EEEEeCCCcc-ceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeeccE
Q 047026 487 IKFHLDSIIK-GTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDNS 565 (596)
Q Consensus 487 I~F~L~~~~~-~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~Nt 565 (596)
=.|++++... ....|++..+. ....|.|||+.++. -.|-+..++|+|.. .|+.|+|+
T Consensus 132 r~F~vp~~~~g~~v~L~F~gv~---~~a~V~vNG~~vG~------------------~~gg~~p~~~DIT~-~L~~G~N~ 189 (1010)
T 3bga_A 132 RTFKVPADWKGRRVVLCCEGVI---SFYYVWVNGKLLGY------------------NQGSKTAAEWDITD-VLSEGENV 189 (1010)
T ss_dssp EEEECCGGGTTSEEEEEESCEE---SEEEEEETTEEEEE------------------EECSSSCEEEECGG-GCCSSEEE
T ss_pred EEeEeCcccCCCEEEEEECCCC---ceeEEEECCEEEee------------------EeCCCCcceeehhh-hccCCCcE
Confidence 3688876543 34556655433 45789999986531 12445678899984 78999999
Q ss_pred EEEEEee
Q 047026 566 MFLVQSR 572 (596)
Q Consensus 566 I~l~~~~ 572 (596)
|.+.+.+
T Consensus 190 L~V~V~~ 196 (1010)
T 3bga_A 190 VALEVYR 196 (1010)
T ss_dssp EEEEEES
T ss_pred EEEEEEe
Confidence 9999964
No 69
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=39.87 E-value=27 Score=41.55 Aligned_cols=65 Identities=20% Similarity=0.186 Sum_probs=43.7
Q ss_pred EEEEEeCCCc--cc--eEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceee
Q 047026 486 TIKFHLDSII--KG--TYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIK 561 (596)
Q Consensus 486 ~I~F~L~~~~--~~--~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~ 561 (596)
+=.|++++.. .+ ...|++.-+. ....|.|||+.++. -.|-+.-++|+|. ..|+.
T Consensus 123 rr~F~vp~~~~~~g~~rv~L~F~gv~---~~a~V~vNG~~VG~------------------~~gg~~p~~~DIT-~~Lk~ 180 (1024)
T 1yq2_A 123 RRRFDVPAQWFESTTAALTLRFDGVE---SRYKVWVNGQEIGV------------------GSGSRLAQEFDVS-DALRA 180 (1024)
T ss_dssp EEEEEECGGGGSTTEEEEEEEESCEE---SCEEEEETTEEEEE------------------ECCTTSCEEEECT-TTCCS
T ss_pred EEEeEECchHhcCCCceEEEEECCCC---ceEEEEECCEEEEE------------------EeCCccceEEecH-HhccC
Confidence 3468887653 32 3445554332 34789999986531 0234567889998 67899
Q ss_pred eccEEEEEEee
Q 047026 562 GDNSMFLVQSR 572 (596)
Q Consensus 562 G~NtI~l~~~~ 572 (596)
|+|+|.+.+.+
T Consensus 181 G~N~L~V~V~~ 191 (1024)
T 1yq2_A 181 GSNLLVVRVHQ 191 (1024)
T ss_dssp EEEEEEEEEES
T ss_pred CCcEEEEEEEe
Confidence 99999999964
No 70
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=39.24 E-value=11 Score=36.89 Aligned_cols=26 Identities=19% Similarity=0.183 Sum_probs=22.1
Q ss_pred EEEECCccceEeCCccCCeeEEEEEE
Q 047026 339 WVQTDSKGNFTVKNVVPGVYGLHGWV 364 (596)
Q Consensus 339 wt~td~~G~FtI~nVrpGtY~L~a~~ 364 (596)
-..||++|.++|.++++|+|.|.=..
T Consensus 71 ~~tTd~~G~~~~~~L~~G~Y~v~Et~ 96 (239)
T 2pz4_A 71 EATTNQQGKATFNQLPDGIYYGLAVK 96 (239)
T ss_dssp EEECCTTSEEEEEEEESEEEEEEEEE
T ss_pred EEEECCCCeEEECCCCCeeEEEEEEE
Confidence 34689999999999999999987543
No 71
>3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus}
Probab=36.15 E-value=57 Score=33.25 Aligned_cols=105 Identities=16% Similarity=0.320 Sum_probs=60.4
Q ss_pred CCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCeeEEEEEEcceeeeEeeeeEEEEeCCCeeeecc-
Q 047026 311 IPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGVYGLHGWVPGFIGDYLDKALVTISAGSQTELGN- 389 (596)
Q Consensus 311 ~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~~~~~VtV~aG~t~~l~~- 389 (596)
..+.++.|.+ |...+...|-|+..+.+|.|+|.|+..|.+ +.|..|.++.-|.
T Consensus 77 sTadGa~V~q--------W~~nGg~NQqW~l~~~~G~y~I~n~~SGkc------------------LDV~~gsttanGaV 130 (286)
T 3phz_A 77 AATDGTAIIG--------YRPTGGDNQKWIISQINDVWKIKSKETGTF------------------VTLLNGDGGGTGTV 130 (286)
T ss_dssp CCSTTEEEEE--------ECCCCCGGGCEEEEESSSCEEEEETTTCCE------------------EEEETC---CCCEE
T ss_pred cCCCCCeEEE--------eCCCCChhcEEEEEcCCCeEEEEECCCCcE------------------EEeCCCCcCCCceE
Confidence 4567788888 554555788898877789999999888753 1222222201111
Q ss_pred eEEeeC-CCCCceEEEeccCCCCcce-----ecCCCCccc----ccccccCCchhhhcccccc
Q 047026 390 LTYVPL-RNGPTVWEIGFPDRTALGC-----YVPDVNPMY----VNKLFLNSPEKYRQYGLWD 442 (596)
Q Consensus 390 l~~~~~-~~g~~LweIG~~Drta~~F-----~~~d~~~~~----~n~~~~~hp~~~R~yglW~ 442 (596)
..|+.. ....+.|++.--..++.++ ++|+..|.+ |+++|.--|.+.-- .||.
T Consensus 131 ~qWt~~tgg~NQqW~~~~vs~tg~~i~~~l~~~p~~~~~~~~y~~d~~y~~~~~~~~~-~iw~ 192 (286)
T 3phz_A 131 VGWQNITNNTSQNWTFQKLSQTGANVHATLLACPALRQDFKSYLSDGLYLVLTRDQIS-SIWQ 192 (286)
T ss_dssp EEESCCCSSCTTCEEEEECEEEHHHHHHHHHHCTTTCSCCBCSSSSCEEECCCHHHHH-HHHH
T ss_pred EEccCCCCCccCcEEEEEccCCcccceehhccCCccCCCEEEEcCCceEEeccHHHHH-Hhhh
Confidence 235421 2567899987666666554 346655554 44555554444333 3775
No 72
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=32.86 E-value=27 Score=41.67 Aligned_cols=65 Identities=20% Similarity=0.197 Sum_probs=43.7
Q ss_pred EEEEEeCCCc-c-ceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeec
Q 047026 486 TIKFHLDSII-K-GTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGD 563 (596)
Q Consensus 486 ~I~F~L~~~~-~-~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 563 (596)
+=.|++++.. . ....|++..+. ....|.|||+.++. -.|-+..++|+|+. .|+.|+
T Consensus 117 rr~f~vp~~~~~~~~v~L~F~gv~---~~a~V~vNG~~vG~------------------~~gg~~p~~~DIT~-~lk~G~ 174 (1032)
T 3oba_A 117 ARTFELDSKSIESFEHRLRFEGVD---NCYELYVNGQYVGF------------------NKGSRNGAEFDIQK-YVSEGE 174 (1032)
T ss_dssp EEEEEECHHHHHHEEEEEEESCEE---SEEEEEETTEEEEE------------------EECTTSCEEEECTT-TCCSEE
T ss_pred EEEEEECchhcCCCEEEEEECCcc---eeEEEEECCEEEEE------------------EeCCcccEEEEChh-hccCCc
Confidence 4468887643 2 23445554333 45789999986531 12345678999987 678999
Q ss_pred cEEEEEEee
Q 047026 564 NSMFLVQSR 572 (596)
Q Consensus 564 NtI~l~~~~ 572 (596)
|+|.+.+.+
T Consensus 175 N~L~V~V~~ 183 (1032)
T 3oba_A 175 NLVVVKVFK 183 (1032)
T ss_dssp EEEEEEEES
T ss_pred EEEEEEEEC
Confidence 999999965
No 73
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=32.27 E-value=80 Score=35.79 Aligned_cols=41 Identities=10% Similarity=0.219 Sum_probs=32.5
Q ss_pred ceeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCeeEEEEEE
Q 047026 314 KYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGVYGLHGWV 364 (596)
Q Consensus 314 ~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGtY~L~a~~ 364 (596)
..+.|.|..+. +..|+++++.+|...|..+.||+|+|++..
T Consensus 464 ~~~~v~l~~~~----------~~~~~~~t~~dg~~~~~~~~~G~Y~~~v~g 504 (671)
T 1r6v_A 464 PTVFVSMMRDN----------GSCYYAKTGPDGIARFPHIDSGTYDIFVGG 504 (671)
T ss_dssp TTEEEEEECSS----------SCCEEEECCTTSEEEEEEEECEEEEEEEEE
T ss_pred ceeEEEEecCC----------CceEecccCCCCceeeeccCceEEEEEEec
Confidence 34556665443 566899999999999999999999999854
No 74
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=30.80 E-value=47 Score=37.12 Aligned_cols=27 Identities=22% Similarity=0.497 Sum_probs=23.8
Q ss_pred EEEECCccceEeCCccCCeeEEEEEEc
Q 047026 339 WVQTDSKGNFTVKNVVPGVYGLHGWVP 365 (596)
Q Consensus 339 wt~td~~G~FtI~nVrpGtY~L~a~~~ 365 (596)
|..+.....-+..|++||+|+|.|-+.
T Consensus 731 W~~~~~~~~~~ytnL~pG~Y~f~V~a~ 757 (781)
T 3v9f_A 731 WYTINEQNSVTFRNIPPGKYEFLVKAR 757 (781)
T ss_dssp EEEESSCSEEEECSCCSEEEEEEEEEE
T ss_pred ccCcCCcceEEEcCCCCceEEEEEEEE
Confidence 778887788999999999999999763
No 75
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=29.61 E-value=46 Score=29.06 Aligned_cols=26 Identities=23% Similarity=0.429 Sum_probs=18.0
Q ss_pred CccCCeeEEEEEEcceeeeEeeeeEEEEe
Q 047026 352 NVVPGVYGLHGWVPGFIGDYLDKALVTIS 380 (596)
Q Consensus 352 nVrpGtY~L~a~~~G~~G~~~~~~~VtV~ 380 (596)
.+.||+|.|.+|++|- ......|+..
T Consensus 27 ~~~PG~Y~vdI~vN~~---~~~~~~i~f~ 52 (125)
T 3bwu_D 27 ELPPGTYRVDIYLNNG---YMATRDVTFN 52 (125)
T ss_dssp SSCSEEEEEEEEETTE---EEEEEEEEEE
T ss_pred CcCCcEEEEEEEECCe---EccceEEEEE
Confidence 4789999999999962 2333345553
No 76
>4b0m_A F1 capsule-anchoring protein; protein transport, chaperone-usher pathway, PILI assembly; 1.80A {Yersinia pestis} PDB: 4b0e_A
Probab=28.11 E-value=30 Score=31.11 Aligned_cols=29 Identities=24% Similarity=0.403 Sum_probs=19.3
Q ss_pred eEeCCccCCeeEEEEEEcceeeeEeeeeEEEE
Q 047026 348 FTVKNVVPGVYGLHGWVPGFIGDYLDKALVTI 379 (596)
Q Consensus 348 FtI~nVrpGtY~L~a~~~G~~G~~~~~~~VtV 379 (596)
|+-.++.||+|.+-+|++| .+.....|+.
T Consensus 22 F~~g~~~PG~Y~vdI~vN~---~~~~~~~i~F 50 (136)
T 4b0m_A 22 FNQGLQLPGNYFVNVFVNG---RKVDSGNIDF 50 (136)
T ss_dssp HHTTCCCCEEEEEEEEETT---EEEEEEEEEE
T ss_pred hcCCCCCCcEEEEEEEECC---ccccceEEEE
Confidence 4334577999999999996 3343344544
No 77
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=27.54 E-value=2.1e+02 Score=30.99 Aligned_cols=80 Identities=20% Similarity=0.162 Sum_probs=49.5
Q ss_pred CCCceeEEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEeC--CccCCeeEEEEEEcc
Q 047026 289 ANERGSATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVK--NVVPGVYGLHGWVPG 366 (596)
Q Consensus 289 ~~~RGtVsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~--nVrpGtY~L~a~~~G 366 (596)
+.+.-...=++++.|. .+.|..+..|.+..++. .- -..--..||++|.+++. .-++|+|+++|...|
T Consensus 22 AdG~~~~~ltatV~D~----~Gnpv~g~~Vtf~~~~g--~~-----~~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~g 90 (492)
T 1cwv_A 22 ANGKTAITVEFTVADF----EGKPLAGQEVVITTNNG--AL-----PNKITEKTDANGVARIALTNTTDGVTVVTAEVEG 90 (492)
T ss_dssp SSSSSCEEEEEEEECT----TSCBCCSCEEEEECCTT--CB-----SCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETT
T ss_pred eCCCceEEEEEEEEcC----CCCCCCCCEEEEEECCC--cc-----ccccceeeCCCceEEEEEEcCcceEEEEEEEECC
Confidence 3333333344444452 27888888888865431 11 11234578999987754 568999999999986
Q ss_pred eeeeEeeeeEEEEeCCC
Q 047026 367 FIGDYLDKALVTISAGS 383 (596)
Q Consensus 367 ~~G~~~~~~~VtV~aG~ 383 (596)
. .+...|++.+|.
T Consensus 91 ~----s~s~~v~f~a~~ 103 (492)
T 1cwv_A 91 Q----RQSVDTHFVKGT 103 (492)
T ss_dssp E----EEEEEEEEECCC
T ss_pred c----cceeEEEEeecc
Confidence 3 233456676664
No 78
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=27.18 E-value=43 Score=37.56 Aligned_cols=27 Identities=15% Similarity=0.267 Sum_probs=23.2
Q ss_pred EEEECCccceEeCCccCCeeEEEEEEc
Q 047026 339 WVQTDSKGNFTVKNVVPGVYGLHGWVP 365 (596)
Q Consensus 339 wt~td~~G~FtI~nVrpGtY~L~a~~~ 365 (596)
|..+.....-+..|++||+|+|.|.+.
T Consensus 737 W~~~~~~~~~~ytnL~pG~Y~f~V~a~ 763 (795)
T 4a2l_A 737 WYYLTDSRTVSYSNLPQGTYQFLVKAA 763 (795)
T ss_dssp CEEESSCCEEEEECCCSEEEEEEEEEE
T ss_pred ccCCCCcCeEEecccCCCeEEEEEEEE
Confidence 777777778999999999999999764
No 79
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=26.21 E-value=59 Score=26.71 Aligned_cols=28 Identities=25% Similarity=0.264 Sum_probs=15.5
Q ss_pred ccCCeeEEEEEEcceeeeEeeeeEEEEe
Q 047026 353 VVPGVYGLHGWVPGFIGDYLDKALVTIS 380 (596)
Q Consensus 353 VrpGtY~L~a~~~G~~G~~~~~~~VtV~ 380 (596)
-+||+|++.+-+..-.+.-.....|+|+
T Consensus 52 ~~~G~YtV~Ltv~~g~~~~~a~~~V~V~ 79 (80)
T 1b4r_A 52 VLPGRYHVTAVLALGAGSALLGTDVQVE 79 (80)
T ss_dssp CSSEEEEEEEEEECSSCEEEEEEEEEEB
T ss_pred CCCcEEEEEEEEEeCCceEEEEEEEEEE
Confidence 3789998877654211222344556665
No 80
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=25.25 E-value=52 Score=36.65 Aligned_cols=27 Identities=22% Similarity=0.166 Sum_probs=21.5
Q ss_pred EEEEC-CccceEeCCccCCeeEEEEEEc
Q 047026 339 WVQTD-SKGNFTVKNVVPGVYGLHGWVP 365 (596)
Q Consensus 339 wt~td-~~G~FtI~nVrpGtY~L~a~~~ 365 (596)
|..++ ....-+..|++||+|+|.|.+.
T Consensus 702 W~~~~~~~~~~~ytnL~pG~Y~f~V~a~ 729 (758)
T 3ott_A 702 WNFLKSNINRITYSNLSYGNYQLIISKL 729 (758)
T ss_dssp CEECCTTCCEEEECSCCSEEEEEEEEEB
T ss_pred ccCCCCCcceEEecCCCCccEEEEEEEe
Confidence 66665 3456899999999999999864
No 81
>4eiu_A Uncharacterized hypothetical protein; PF12866 family protein, DUF3823, structural genomics, joint for structural genomics, JCSG; HET: PGE; 1.90A {Bacteroides uniformis}
Probab=24.62 E-value=3.6e+02 Score=26.78 Aligned_cols=66 Identities=11% Similarity=0.077 Sum_probs=41.1
Q ss_pred ceeEEEEEEeeecccc-cCCCCcceeEEEEcCCCCCCCcccccccce-eEEEECCccceEeCCccCCeeEEEEE
Q 047026 292 RGSATGRFFVQDKFVS-SSLIPAKYAYIGLSSARTEGGWQTESKDYQ-FWVQTDSKGNFTVKNVVPGVYGLHGW 363 (596)
Q Consensus 292 RGtVsG~v~~~D~~~~-~~~~pa~~a~V~L~~~~~~g~wq~~~~~yq-ywt~td~~G~FtI~nVrpGtY~L~a~ 363 (596)
-++++|+|.-..--.+ .......++-+-|.+.+ |.. +.+.| .+ ....+|.|+=..+=.|+|+|..-
T Consensus 9 ~s~l~G~ivd~~tGE~i~~~~g~~gv~i~l~E~g----~~~-~~~~~~~~-~v~~DGtf~Nt~lF~G~Yki~~~ 76 (249)
T 4eiu_A 9 SETIWGEVVDEATGKRVLTDQGSEGIRVRLTELS----WGD-NVQHNPDF-YCMMDGTFQNTKIFKGEYNVRID 76 (249)
T ss_dssp CEEEEEEEEETTTCCBCCCCSSTTSCEEEEEECC----SSC-CBCCSCCE-ECCTTSEEEEEEECSEEEEEEEE
T ss_pred cceeEEEEEECCCCCEeeeccCCCceEEEEEecc----ccc-CCCccCCE-EECCCCceeeeeEEcceeEEEeC
Confidence 4799999987311000 00122235777776554 533 22444 44 47789999966799999999985
No 82
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=22.67 E-value=34 Score=35.45 Aligned_cols=65 Identities=18% Similarity=0.074 Sum_probs=39.9
Q ss_pred EEEEEEeeecccccCCCCcceeEEEEcCCCCCCCcccccccceeEEEECCccceEeCCccCCeeEEEEE
Q 047026 295 ATGRFFVQDKFVSSSLIPAKYAYIGLSSARTEGGWQTESKDYQFWVQTDSKGNFTVKNVVPGVYGLHGW 363 (596)
Q Consensus 295 VsG~v~~~D~~~~~~~~pa~~a~V~L~~~~~~g~wq~~~~~yqywt~td~~G~FtI~nVrpGtY~L~a~ 363 (596)
..|.|.+...- ..++.+..+|...|... +|.....+ +...-..+|++|.|.|.++++|+|.|.=-
T Consensus 249 ~tg~i~i~K~d-~~~~~~L~GA~F~l~~~--~g~~~~~~-~~~~~~~td~~G~~~~~~L~~G~Y~l~E~ 313 (355)
T 3kpt_A 249 TTGIIELTKID-SANKNKMKGAEFVLKDN--NGKIVVVA-GKEVTGVSDENGVIKWSNIPYGDYQIFET 313 (355)
T ss_dssp CEEEEEEEEEE-TTTCCBCSCCEEEEEET--TSCBCBSS-SSBCEEECCTTSEEEEEEEESSEEEEEEE
T ss_pred cccceEEEEEe-CCCCcccCCCEEEEEeC--CCCEEEec-cceEEEEECCCCeEEECcCCCceEEEEEE
Confidence 35665544311 12356888888777632 12222111 11223458999999999999999999866
No 83
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=21.83 E-value=37 Score=38.49 Aligned_cols=41 Identities=17% Similarity=0.350 Sum_probs=26.9
Q ss_pred CCeeEEEEcCccCCccccc-ccccCCCCeeeeeeEEEeeEEEEEEeecCceeee-ccEEEE
Q 047026 510 RSDLEIFVNYIDQGHLVYQ-EMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKG-DNSMFL 568 (596)
Q Consensus 510 ~~~~~V~vN~~~~~~p~~~-~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G-~NtI~l 568 (596)
-+.=.|.|||.++++ .+. .+.+ ..+| ||+.+|++| .|+|.+
T Consensus 553 WgKGvV~VNG~NLGR-YW~~~GPQ--------------~TLY---vP~p~Lk~G~~NeIiV 595 (654)
T 3thd_A 553 WTKGQVWINGFNLGR-YWPARGPQ--------------LTLF---VPQHILMTSAPNTITV 595 (654)
T ss_dssp CCSEEEEETTEEEEE-ECTTTCSC--------------CCEE---ECGGGCCSSSCEEEEE
T ss_pred CCeEEEEECCccccc-ccCCCCCe--------------EEEE---ecHHHhCCCCCceEEE
Confidence 345689999988764 221 1221 1333 999999998 897654
No 84
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.47 E-value=1.1e+02 Score=34.51 Aligned_cols=51 Identities=16% Similarity=0.079 Sum_probs=35.8
Q ss_pred EEEeCCCccceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceeeeccEEE
Q 047026 488 KFHLDSIIKGTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIKGDNSMF 567 (596)
Q Consensus 488 ~F~L~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~ 567 (596)
.|+|++. ++|.|. +-+..++.|||+.+.. ++.- + +|++|+|+|-
T Consensus 64 ~f~~~~~----a~l~i~----a~G~ye~~iNG~~vg~--------------y~~r------~--------~L~~G~N~i~ 107 (739)
T 3cih_A 64 VLNLSEP----EEVFIA----AEGTYNVKLDGKLQFG--------------MPET------L--------LLPAGKHSLN 107 (739)
T ss_dssp EEEESSC----EEEEEE----EESEEEEEETTEECSS--------------CCSE------E--------EECSEEEEEE
T ss_pred EEEcCCC----cEEEEE----EcCcEEEEECCEEccC--------------CCCc------e--------EecCCceEEE
Confidence 5888652 566665 5589999999997751 1110 1 4889999999
Q ss_pred EEEeecC
Q 047026 568 LVQSRSG 574 (596)
Q Consensus 568 l~~~~g~ 574 (596)
+.+-.|.
T Consensus 108 v~lg~g~ 114 (739)
T 3cih_A 108 IKVWNQA 114 (739)
T ss_dssp EEEECSS
T ss_pred EEEEeCC
Confidence 9987764
No 85
>2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae}
Probab=21.43 E-value=31 Score=37.22 Aligned_cols=44 Identities=20% Similarity=0.388 Sum_probs=30.1
Q ss_pred EEECCccceEeCCccCCeeEEEEEE--cceeeeEeeeeEEEEeCCCe
Q 047026 340 VQTDSKGNFTVKNVVPGVYGLHGWV--PGFIGDYLDKALVTISAGSQ 384 (596)
Q Consensus 340 t~td~~G~FtI~nVrpGtY~L~a~~--~G~~G~~~~~~~VtV~aG~t 384 (596)
-.+|++|.|.|.++.+|+|.|.=-. .|+.= ......++|.+++.
T Consensus 378 ~ttd~~G~~~~~~L~~G~Y~l~EtkAP~GY~l-~~~~~~f~i~~~~~ 423 (452)
T 2xtl_A 378 LISNDKGQFEITGLTEGQYSLEETQAPTGYAK-LSGDVSFNVNATSY 423 (452)
T ss_dssp EECCTTSEEEEEEECSEEEEEEEEECCTTBCC-CSSCEEEEECTTTT
T ss_pred EEeCCCCeEEECCCCCceEEEEEeeCCCCccc-CCCCEEEEEeCCcc
Confidence 3589999999999999999998663 23220 01223467776654
No 86
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=21.41 E-value=31 Score=37.05 Aligned_cols=44 Identities=20% Similarity=0.395 Sum_probs=29.7
Q ss_pred EEECCccceEeCCccCCeeEEEEEE--cceeeeEeeeeEEEEeCCCe
Q 047026 340 VQTDSKGNFTVKNVVPGVYGLHGWV--PGFIGDYLDKALVTISAGSQ 384 (596)
Q Consensus 340 t~td~~G~FtI~nVrpGtY~L~a~~--~G~~G~~~~~~~VtV~aG~t 384 (596)
..+|++|.|.|.++++|+|.|.=-. .|+.- ....-.++|++++.
T Consensus 372 ~~td~~G~~~~~~L~~G~Y~l~EtkAP~GY~l-~~~~~~f~i~~~~~ 417 (444)
T 2x9x_A 372 LVSDAQGRFEITGLLAGTYYLEETKQPAGYAL-LTSRQKFEVTATSY 417 (444)
T ss_dssp EECCTTCEEEEEEECSEEEEEEEEECCTTSCC-CCSCEEEEECTTTT
T ss_pred EEECCCCeEEECCCCCceEEEEEeeCCCCccc-CCCcEEEEEeCCcc
Confidence 4589999999999999999998663 23220 01223466766654
No 87
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=21.32 E-value=1.9e+02 Score=25.55 Aligned_cols=56 Identities=11% Similarity=0.151 Sum_probs=37.8
Q ss_pred CCeeEEEEEEcceeeeEeeeeEEEEeCCCeeeecceEEeeCCCC-CceEEEeccCCCCcce
Q 047026 355 PGVYGLHGWVPGFIGDYLDKALVTISAGSQTELGNLTYVPLRNG-PTVWEIGFPDRTALGC 414 (596)
Q Consensus 355 pGtY~L~a~~~G~~G~~~~~~~VtV~aG~t~~l~~l~~~~~~~g-~~LweIG~~Drta~~F 414 (596)
.+.|++.+|.+|- ......|.+.+|++.++ .+.|.+...| -+|.-+..++.+-.|.
T Consensus 49 a~~~~V~lyvng~---~v~t~~v~La~G~s~tv-~f~~~~~~~G~~~v~AvVD~~n~I~E~ 105 (127)
T 3idu_A 49 VPSTKVRVYINGT---LYKNWTVSLGPKEEKVL-TFNWTPTQEGMYRINATVDEENTVVEL 105 (127)
T ss_dssp EEEEEEEEEETTE---EEEEEEEEECTTCEEEE-EEEECCSSCEEEEEEEEESTTCCSCCS
T ss_pred cCCcEEEEEECCE---EEeeEEeccCCCCeEEE-EEEEEcCCCcEEEEEEEEcCCCcEeec
Confidence 4568899999863 34445688999999887 5888753333 3466667776655444
No 88
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=21.27 E-value=52 Score=29.22 Aligned_cols=15 Identities=27% Similarity=0.379 Sum_probs=13.7
Q ss_pred CccCCeeEEEEEEcc
Q 047026 352 NVVPGVYGLHGWVPG 366 (596)
Q Consensus 352 nVrpGtY~L~a~~~G 366 (596)
.++||+|+|.|+..|
T Consensus 89 ~~~pG~Ytl~a~l~~ 103 (120)
T 3isy_A 89 VPEPGTYEVKVTFKG 103 (120)
T ss_dssp CCCSEEEEEEEEECC
T ss_pred CCCCccEEEEEEEEe
Confidence 689999999999886
No 89
>4d8m_A Pesticidal crystal protein CRY5BA; glycolipid binding, lipid binding protein; 2.30A {Bacillus thuringiensis}
Probab=20.94 E-value=4e+02 Score=29.71 Aligned_cols=96 Identities=17% Similarity=0.288 Sum_probs=49.1
Q ss_pred CccEEEEEEeCCCccceEEEEEEEeccCCCeeEEE--EcCccCCcccccccccCCC--CeeeeeeEEEeeEEEEEEeecC
Q 047026 482 PTTWTIKFHLDSIIKGTYNLRLAIASATRSDLEIF--VNYIDQGHLVYQEMNLGMD--NTVCRHGIHGLYQLFSIHVSSL 557 (596)
Q Consensus 482 ~~~w~I~F~L~~~~~~~~tLriala~a~~~~~~V~--vN~~~~~~p~~~~~~~~~d--~~i~R~~~~G~~~~~~~~ipa~ 557 (596)
+.++++.|.-.. .+.|++||-.|+.....+-+. ++|..+ .....++.+ +...--|-.|+|.+.. .+.-
T Consensus 485 ~q~l~~~i~n~~--~~~Y~VR~RYAS~~d~~~~~~~~~~~~~i----~n~~~fp~T~~~~~~v~G~nG~y~~~~--~~~~ 556 (587)
T 4d8m_A 485 SQSVGIQITNQT--KQKYEIRCRYASKGDNNVYFNVDLSENPF----RNSISFGSTESSVVGVQGENGKYILKS--ITTV 556 (587)
T ss_dssp TCEEEEEEEECS--CEEEEEEEEEEESSCEEEEEEECCSSSCE----EEEEEECCCTTCSSSEECSSSEEEEEE--EEEE
T ss_pred CCEEEEEEEccc--cceEEEEEEEecCCCceEEEEEcCCCcee----eccCCCCccccccccccccCCceEeec--CCce
Confidence 345666665433 578999999999766553333 333322 111223321 2222222235554433 3333
Q ss_pred ceeeeccEEEEEEeecCCCCceEEEEEEEEec
Q 047026 558 LLIKGDNSMFLVQSRSGDPVCGVLYDYLRLEA 589 (596)
Q Consensus 558 ~L~~G~NtI~l~~~~g~s~~~~vmyD~IrLe~ 589 (596)
.|-.|. +++.+...+++ .+.-|-|++.-
T Consensus 557 ~~p~g~--~t~~i~nn~~~--~~~iDRIEFiP 584 (587)
T 4d8m_A 557 EIPAGS--FYVHITNQGSS--DLFLDRIEFVP 584 (587)
T ss_dssp EECSEE--EEEEEEECSSS--CEEEEEEEEEE
T ss_pred EecCCc--EEEEEEecCCC--CEEEEEEEeee
Confidence 444565 44444432222 68899999873
No 90
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=20.17 E-value=52 Score=36.42 Aligned_cols=65 Identities=22% Similarity=0.193 Sum_probs=41.8
Q ss_pred EEEEEeCCCc----cceEEEEEEEeccCCCeeEEEEcCccCCcccccccccCCCCeeeeeeEEEeeEEEEEEeecCceee
Q 047026 486 TIKFHLDSII----KGTYNLRLAIASATRSDLEIFVNYIDQGHLVYQEMNLGMDNTVCRHGIHGLYQLFSIHVSSLLLIK 561 (596)
Q Consensus 486 ~I~F~L~~~~----~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~d~~i~R~~~~G~~~~~~~~ipa~~L~~ 561 (596)
+-.|.+++.- .....|++.-+ .....|.|||+.++. -.|-+.-++++|+ ..|+.
T Consensus 82 r~~f~~p~~~~~~~~~~~~L~f~gv---~~~a~V~vNG~~vg~------------------~~~g~~~~~~dit-~~l~~ 139 (613)
T 3hn3_A 82 EREVILPERWTQDLRTRVVLRIGSA---HSYAIVWVNGVDTLE------------------HEGGYLPFEADIS-NLVQV 139 (613)
T ss_dssp EEEECCCHHHHHCTTEEEEEEESCC---CSEEEEEETTEEEEE------------------EESSSSCEEEECH-HHHCC
T ss_pred EEEEEeCchhhhcCCCEEEEEECCc---ceEEEEEECCEEEeE------------------EcCCcceEEEECh-hhhcC
Confidence 4468886541 22344555433 355789999986531 1234567889997 68888
Q ss_pred ec----cEEEEEEee
Q 047026 562 GD----NSMFLVQSR 572 (596)
Q Consensus 562 G~----NtI~l~~~~ 572 (596)
|. |+|.+.+.+
T Consensus 140 g~~~~~n~l~V~v~n 154 (613)
T 3hn3_A 140 GPLPSRLRITIAINN 154 (613)
T ss_dssp C---CCEEEEEEEEC
T ss_pred CCCCcceEEEEEEeC
Confidence 86 999999853
Done!