Your job contains 1 sequence.
>047029
MPSTSSVLSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKFSDQLT
LIIEQSEGFSVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEG
MQLTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAI
KETKKVIKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAW
KRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLRRLLVSTGNRSILVIED
IDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALL
RPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEELIKEVEVTPAEEFMKSEDAD
VALNGLVDFLLRKKEQTMKCNEEENESLKNEEDCT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047029
(455 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2077997 - symbol:BCS1 "cytochrome BC1 synthesi... 1099 3.8e-114 2
TAIR|locus:2078007 - symbol:AT3G50940 species:3702 "Arabi... 1106 4.6e-112 1
TAIR|locus:1005716649 - symbol:AT2G18193 species:3702 "Ar... 1066 8.1e-108 1
TAIR|locus:2175986 - symbol:AT5G17760 species:3702 "Arabi... 1027 1.1e-103 1
TAIR|locus:2053109 - symbol:AT2G18190 species:3702 "Arabi... 1022 3.7e-103 1
TAIR|locus:2175956 - symbol:AT5G17740 species:3702 "Arabi... 985 3.1e-99 1
TAIR|locus:2175946 - symbol:AT5G17730 species:3702 "Arabi... 970 1.2e-97 1
TAIR|locus:2037186 - symbol:AT1G43910 species:3702 "Arabi... 837 1.5e-83 1
TAIR|locus:505006520 - symbol:AT4G25835 species:3702 "Ara... 535 7.4e-80 2
TAIR|locus:2175976 - symbol:AT5G17750 species:3702 "Arabi... 799 1.6e-79 1
TAIR|locus:2174502 - symbol:AT5G57480 species:3702 "Arabi... 512 8.5e-77 2
TAIR|locus:2098648 - symbol:AT3G28540 species:3702 "Arabi... 438 4.1e-75 2
TAIR|locus:2095512 - symbol:AT3G28580 species:3702 "Arabi... 448 5.2e-75 2
TAIR|locus:2095537 - symbol:AT3G28610 species:3702 "Arabi... 749 3.1e-74 1
TAIR|locus:2095502 - symbol:AT3G28570 species:3702 "Arabi... 740 2.8e-73 1
TAIR|locus:2098658 - symbol:AT3G28510 species:3702 "Arabi... 422 2.3e-72 2
TAIR|locus:2178067 - symbol:AATP1 "AAA-ATPase 1" species:... 433 2.9e-72 2
TAIR|locus:2128916 - symbol:AT4G30250 species:3702 "Arabi... 713 2.1e-70 1
TAIR|locus:2178057 - symbol:AT5G40000 species:3702 "Arabi... 710 4.3e-70 1
TAIR|locus:2098638 - symbol:AT3G28520 species:3702 "Arabi... 385 1.8e-68 2
TAIR|locus:2115954 - symbol:AT4G05380 species:3702 "Arabi... 631 1.0e-61 1
TAIR|locus:2095532 - symbol:AT3G28600 species:3702 "Arabi... 629 1.6e-61 1
TAIR|locus:2039981 - symbol:AT2G46620 species:3702 "Arabi... 507 1.4e-48 1
TAIR|locus:2086591 - symbol:AT3G29800 species:3702 "Arabi... 439 2.2e-41 1
DICTYBASE|DDB_G0286765 - symbol:DDB_G0286765 "BCS1-like p... 328 5.0e-29 1
POMBASE|SPAC644.07 - symbol:SPAC644.07 "mitochondrial Rie... 312 3.0e-27 1
WB|WBGene00010042 - symbol:bcs-1 species:6239 "Caenorhabd... 311 3.4e-27 1
SGD|S000002783 - symbol:BCS1 "Protein translocase and cha... 298 7.6e-25 1
ASPGD|ASPL0000041452 - symbol:AN3131 species:162425 "Emer... 299 9.6e-25 1
FB|FBgn0032195 - symbol:CG4908 species:7227 "Drosophila m... 294 1.5e-24 1
UNIPROTKB|G4MYI1 - symbol:MGG_10383 "Mitochondrial chaper... 297 1.8e-24 1
CGD|CAL0005742 - symbol:orf19.458 species:5476 "Candida a... 283 6.1e-23 1
ZFIN|ZDB-GENE-040426-938 - symbol:bcs1l "BCS1-like (yeast... 278 1.7e-22 1
DICTYBASE|DDB_G0291910 - symbol:bcs1lB "mitochondrial cha... 193 1.8e-21 2
ASPGD|ASPL0000063397 - symbol:AN7549 species:162425 "Emer... 177 2.9e-21 2
MGI|MGI:1914071 - symbol:Bcs1l "BCS1-like (yeast)" specie... 267 4.2e-21 1
UNIPROTKB|F1P1Q6 - symbol:BCS1L "Uncharacterized protein"... 267 4.3e-21 1
DICTYBASE|DDB_G0289135 - symbol:bcs1lA "mitochondrial cha... 267 4.5e-21 1
UNIPROTKB|E1BWG5 - symbol:BCS1L "Uncharacterized protein"... 266 5.8e-21 1
RGD|1359658 - symbol:Bcs1l "BC1 (ubiquinol-cytochrome c r... 259 4.0e-20 1
UNIPROTKB|E2RE50 - symbol:BCS1L "Uncharacterized protein"... 257 7.2e-20 1
UNIPROTKB|Q9Y276 - symbol:BCS1L "Mitochondrial chaperone ... 256 9.5e-20 1
TAIR|locus:2115914 - symbol:AT4G05340 species:3702 "Arabi... 239 1.1e-19 1
UNIPROTKB|I3LFK0 - symbol:BCS1L "Uncharacterized protein"... 252 2.9e-19 1
UNIPROTKB|Q5E9H5 - symbol:BCS1L "Mitochondrial chaperone ... 251 3.8e-19 1
GENEDB_PFALCIPARUM|PFF0155w - symbol:PFF0155w "bcs1-like ... 152 1.9e-17 2
UNIPROTKB|C6KSN2 - symbol:PFF0155w "Bcs1 protein, putativ... 152 1.9e-17 2
ASPGD|ASPL0000007908 - symbol:AN6397 species:162425 "Emer... 151 7.2e-17 2
UNIPROTKB|G4NGV5 - symbol:MGG_04018 "Mitochondrial chaper... 135 4.5e-15 2
UNIPROTKB|G4MXF6 - symbol:MGG_15496 "Uncharacterized prot... 214 2.5e-14 1
UNIPROTKB|G4MN83 - symbol:MGG_02058 "Mitochondrial chaper... 131 4.6e-13 2
TAIR|locus:2043619 - symbol:AT2G45500 species:3702 "Arabi... 190 6.5e-12 1
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 193 7.6e-12 1
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 190 9.8e-12 1
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 190 9.8e-12 1
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 189 1.3e-11 1
TAIR|locus:2115944 - symbol:AT4G05370 "AT4G05370" species... 165 1.5e-11 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 188 1.7e-11 1
TAIR|locus:2095467 - symbol:AT3G28560 "AT3G28560" species... 175 2.3e-11 1
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 182 3.1e-11 1
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 186 3.8e-11 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 181 4.1e-11 1
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 180 5.0e-11 1
UNIPROTKB|H7BZF6 - symbol:BCS1L "Mitochondrial chaperone ... 160 5.2e-11 1
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 180 5.5e-11 1
UNIPROTKB|G4MMM3 - symbol:MGG_16395 "ATP-dependent Zn pro... 179 1.0e-10 1
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 180 1.3e-10 1
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 180 1.3e-10 1
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 176 1.7e-10 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 176 1.7e-10 1
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 178 2.3e-10 1
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 178 2.3e-10 1
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 174 2.6e-10 1
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 174 2.6e-10 1
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 174 3.1e-10 1
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 185 3.3e-10 2
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 175 4.5e-10 1
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 175 4.5e-10 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 169 9.4e-10 1
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 172 1.0e-09 1
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 171 1.2e-09 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 173 1.3e-09 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 173 1.3e-09 1
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica... 168 1.4e-09 1
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 167 1.6e-09 1
CGD|CAL0001552 - symbol:PR26 species:5476 "Candida albica... 167 1.7e-09 1
UNIPROTKB|Q5A0L8 - symbol:PR26 "Likely 26S proteasome reg... 167 1.7e-09 1
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 166 1.9e-09 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 167 1.9e-09 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 165 2.1e-09 1
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 165 2.3e-09 1
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 166 2.4e-09 1
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 165 2.5e-09 1
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 165 2.5e-09 1
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 165 2.5e-09 1
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 165 2.5e-09 1
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 165 2.5e-09 1
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 165 2.5e-09 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 165 2.5e-09 1
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 165 2.5e-09 1
WARNING: Descriptions of 312 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2077997 [details] [associations]
symbol:BCS1 "cytochrome BC1 synthesis" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009612
"response to mechanical stimulus" evidence=RCA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2680378 EMBL:AY064981 EMBL:BT002611 IPI:IPI00548437
RefSeq:NP_190662.2 UniGene:At.23776 ProteinModelPortal:Q8VZG2
SMR:Q8VZG2 STRING:Q8VZG2 PRIDE:Q8VZG2 EnsemblPlants:AT3G50930.1
GeneID:824257 KEGG:ath:AT3G50930 TAIR:At3g50930 InParanoid:Q8VZG2
OMA:QLMRSDE PhylomeDB:Q8VZG2 Genevestigator:Q8VZG2 Uniprot:Q8VZG2
Length = 576
Score = 1099 (391.9 bits), Expect = 3.8e-114, Sum P(2) = 3.8e-114
Identities = 226/458 (49%), Positives = 315/458 (68%)
Query: 1 MPSTSSVLSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKFSDQLT 60
+ + +VL+T + AA+AML R+++ + ++P ++ +S +FG FS Q+T
Sbjct: 55 LATAKTVLTTAASVAATAMLARSLVQD-------YLPDEVHHYISYGFRSIFGYFSSQMT 107
Query: 61 LIIEQSEGFSVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEG 120
+IIE+ EGF+ NE+++AAE YL+T+I+PS ++++VS+ +E + +VT+ ++VVDT+ G
Sbjct: 108 IIIEEFEGFAHNEVFEAAEAYLATKISPSNKRIKVSKHEKENNYNVTVERDEEVVDTYNG 167
Query: 121 MQLTWEL----VTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAER 176
++ W L V +++ D +S L SE +SF L+F K FKD L YLP++ +R
Sbjct: 168 VKFQWILHCRHVESKHFHNPRDLNSTL-RSEV--RSFELNFHKKFKDVALESYLPFMVKR 224
Query: 177 SKAIKETKKVIKLYSLCA-------ADA---INLDHPSTFDTLAMDPVLKQALIDDLDRF 226
+ +K+ KK +K+++L +DA + LDHPSTF TLAMD +K ++++DLD+F
Sbjct: 225 ATLMKQEKKTLKIFTLSPENMYGNYSDAWTSVTLDHPSTFKTLAMDSDVKTSVMEDLDKF 284
Query: 227 VKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXX 286
VKRR+FY RVGKAWKRGYLLYGPPGTGKSSLIAAMAN+L FDIYD+E
Sbjct: 285 VKRRDFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLNFDIYDLELTAVNNNSELRRL 344
Query: 287 XVSTGNRSILVIEDIDCSIELENR-------QCGGGYDENNSQVTLSGLLNFVDGLWSSC 339
++T NRSIL++EDIDCS+EL++R + D +VTLSGLLNF+DGLWSSC
Sbjct: 345 LIATANRSILIVEDIDCSLELKDRTSDEPPRESDDIEDPRYKKVTLSGLLNFIDGLWSSC 404
Query: 340 GDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIE 399
GDERII+FTTNYKE+LD ALLRPGRMDMHIHMSY TP FK LA NYL+IK H +F +IE
Sbjct: 405 GDERIIIFTTNYKEKLDAALLRPGRMDMHIHMSYCTPSTFKALALNYLEIKEHRLFSKIE 464
Query: 400 ELIKEVEVTPAE---EFMKSEDADVALNGLVDFLLRKK 434
E I+ EVTPAE + M+++ D L GL++FL KK
Sbjct: 465 EGIEATEVTPAEVAEQLMRNDSVDKVLEGLIEFLKVKK 502
Score = 47 (21.6 bits), Expect = 3.8e-114, Sum P(2) = 3.8e-114
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 403 KEVEVTPAEEFMKSEDADVALNGLVDFLLRKK 434
KEV+ E+ ++++ D L GLV+ L KK
Sbjct: 533 KEVD----EQLVRNDRVDKVLEGLVELLKAKK 560
>TAIR|locus:2078007 [details] [associations]
symbol:AT3G50940 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363 EMBL:BT026134
IPI:IPI00532009 RefSeq:NP_190663.2 UniGene:At.35440
ProteinModelPortal:Q147F9 SMR:Q147F9 PaxDb:Q147F9 PRIDE:Q147F9
EnsemblPlants:AT3G50940.1 GeneID:824258 KEGG:ath:AT3G50940
TAIR:At3g50940 HOGENOM:HOG000237995 InParanoid:Q147F9 OMA:DCSIELK
PhylomeDB:Q147F9 ProtClustDB:CLSN2680378 Genevestigator:Q147F9
Uniprot:Q147F9
Length = 451
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 218/444 (49%), Positives = 312/444 (70%)
Query: 1 MPSTSSVLSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKFSDQLT 60
+ + + L+ + AA+A+L R+++ + ++P ++ + +S F FS Q+T
Sbjct: 9 LATAKTALTAVASVAAAAILARSVVQD-------YMPNEVHEYISHGFRRFFSYFSYQMT 61
Query: 61 LIIEQSEGFSVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEG 120
+IE+ GF N++++AAE YLST+I+ S ++++V++ ++ + SVT+ ++VVD F+G
Sbjct: 62 AVIEEFGGFEHNQVFEAAEAYLSTKISNSTRRIKVNKLEKQSNYSVTVERDEEVVDIFDG 121
Query: 121 MQLTWELVTTENQKTSLDYDSGLYAS-ETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKA 179
++L+W LV K L ++ ++ +S+ LSF K FK+ VL YLP+V E++ +
Sbjct: 122 VKLSWILVCRHVDKKDFRNPRDLNSTLKSEVRSYELSFRKKFKNMVLESYLPFVVEQAAS 181
Query: 180 IKETKKVIKLYSLCAAD----AINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSR 235
IK+ K +K++++ + ++ LDHPSTF TLA+DP +K+ L++DLDRFV+R+ FY R
Sbjct: 182 IKQKFKTLKIFTVDSYSVEWTSVTLDHPSTFRTLALDPEVKKNLVEDLDRFVQRKGFYGR 241
Query: 236 VGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSI 295
VGKAWKRGYLLYGPPGTGKSSLIAA+AN+L FDIYD++ +ST NRSI
Sbjct: 242 VGKAWKRGYLLYGPPGTGKSSLIAAIANHLNFDIYDLDLTSLNNNAELRRLLMSTANRSI 301
Query: 296 LVIEDIDCSIELENRQCGG-GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKER 354
LV+EDIDCSIEL++R D + VTLSGLLNFVDGLWSSCG+ERIIVFTTNY+E+
Sbjct: 302 LVVEDIDCSIELKDRSTDQENNDPLHKTVTLSGLLNFVDGLWSSCGNERIIVFTTNYREK 361
Query: 355 LDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEELIKEVEVTPAE--- 411
LDPALLRPGRMDMHIHMSY TP FK+LA NYL+I+ H +F++IEE I+E+EVTPAE
Sbjct: 362 LDPALLRPGRMDMHIHMSYCTPAAFKVLASNYLEIQDHILFEQIEEFIREIEVTPAEVAE 421
Query: 412 EFMKSEDADVALNGLVDFLLRKKE 435
+ M+S+ D L GLV+FL KK+
Sbjct: 422 QLMRSDSVDKVLQGLVEFLKAKKQ 445
>TAIR|locus:1005716649 [details] [associations]
symbol:AT2G18193 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 EMBL:BT026385 EMBL:AK118992
EMBL:AK175187 EMBL:AK175325 EMBL:AK176580 IPI:IPI00520678
RefSeq:NP_849972.1 UniGene:At.40029 ProteinModelPortal:Q8GW96
SMR:Q8GW96 PRIDE:Q8GW96 EnsemblPlants:AT2G18193.1 GeneID:816333
KEGG:ath:AT2G18193 TAIR:At2g18193 InParanoid:Q8GW96 OMA:IRSMANE
PhylomeDB:Q8GW96 ProtClustDB:CLSN2690765 Genevestigator:Q8GW96
Uniprot:Q8GW96
Length = 495
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 222/456 (48%), Positives = 304/456 (66%)
Query: 3 STSSVLSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKFSDQLTLI 62
S SS+ S Y + ML R++L++ F+P+KL+ SS L+ F S LT+I
Sbjct: 10 SPSSLFSAYASLTGFLMLFRSMLHD-------FVPEKLRSYFSSLLDRFFTPKSKYLTVI 62
Query: 63 IEQSEGFSVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQ 122
I+++ G + N+++ AAE+YL ++I P ++LRV + P++K +++I G++++DTFE +
Sbjct: 63 IDENFGLNRNQVFDAAEMYLRSKIGPETERLRVGKIPKQKHFTISIERGEEILDTFEESE 122
Query: 123 LTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAIKE 182
+ W V +EN+K + + + L+F K +DKVLN YL +V S+ IK
Sbjct: 123 VKWSYVQSENEK-----------GDKVKRYYELTFEKKLRDKVLNSYLTHVVAESEEIKR 171
Query: 183 TKKVIKLYS--LCAAD-----------AINLDHPSTFDTLAMDPVLKQALIDDLDRFVKR 229
+V+KLYS + A+D INL+HPSTFDTLAMDP K+ +IDDL+RF+KR
Sbjct: 172 NLRVVKLYSRDVYASDDDDGMAGGNWGCINLEHPSTFDTLAMDPNAKKKIIDDLERFLKR 231
Query: 230 REFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVS 289
+EFY RVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFD++D+E +S
Sbjct: 232 KEFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYDNGELKRVLLS 291
Query: 290 TGNRSILVIEDIDCSIELENRQCGGGYDEN-NSQVTLSGLLNFVDGLWSSCGDERIIVFT 348
T NRSILVIEDIDC+ E+ +R+ DE +VTLSG+LNF+DGLWSS GDERIIVFT
Sbjct: 292 TTNRSILVIEDIDCNAEVRDREAENQEDEQIKGKVTLSGILNFIDGLWSSFGDERIIVFT 351
Query: 349 TNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIK--SHSMFDEIEELIKEVE 406
TN+KERLDPALLRPGRMD+HI+MSY T GF+ L NYL + +H + +EIE L+ E
Sbjct: 352 TNHKERLDPALLRPGRMDVHINMSYCTGLGFRTLVSNYLGLDGLNHPLCEEIEALVDSTE 411
Query: 407 VTPAE---EFMKSEDADVALNGLVDFLLRKKEQTMK 439
VTPAE E M+ +D DV L G++ F+ ++K + K
Sbjct: 412 VTPAELAEELMQDDDTDVVLRGVISFVEKRKVERSK 447
>TAIR|locus:2175986 [details] [associations]
symbol:AT5G17760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 HSSP:Q01853 GO:GO:0017111
EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00548078 RefSeq:NP_850841.1 UniGene:At.23914
ProteinModelPortal:Q9FN75 SMR:Q9FN75 PRIDE:Q9FN75
EnsemblPlants:AT5G17760.1 GeneID:831644 KEGG:ath:AT5G17760
TAIR:At5g17760 InParanoid:Q9FN75 OMA:KQHDVQL PhylomeDB:Q9FN75
ProtClustDB:CLSN2686349 Genevestigator:Q9FN75 Uniprot:Q9FN75
Length = 505
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 224/463 (48%), Positives = 305/463 (65%)
Query: 1 MPSTSSVLSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKFSDQ-L 59
+PS +SV + Y + A M++R++ +E+ IP LQD + L LF + S L
Sbjct: 7 LPSPTSVFTAYASMAGYMMMIRSMAHEL-------IPAPLQDFIYRTLRSLFFRSSSSTL 59
Query: 60 TLIIEQSEGFSVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFE 119
TL I+ NEIY+AA+ YLST+I+P +LR+S+ ++K +++ +++G+ V D +E
Sbjct: 60 TLTIDDDNMGMNNEIYRAAQTYLSTKISPDAVRLRISKGHKDKHVNLYLSDGEIVNDVYE 119
Query: 120 GMQLTWELVTTENQKTSLDYDSGLYAS--------ETAHKS--FHLSFSKLFKDKVLNKY 169
+QL W VT K G + KS F LSF K KD +LN Y
Sbjct: 120 DVQLVWRFVTDGGDKKGGGGGVGGRGGGGGRRGGMDDDGKSEYFELSFDKKHKDLILNSY 179
Query: 170 LPYVAERSKAIKETKKVIKLYSLCAA--DAINLDHPSTFDTLAMDPVLKQALIDDLDRFV 227
+PY+ ++K I++ ++++ L+SL + +++ L+HPSTF+T+AM+ LK+ +I+DLDRF+
Sbjct: 180 VPYIESKAKEIRDERRILMLHSLNSLRWESVILEHPSTFETMAMEDDLKRDVIEDLDRFI 239
Query: 228 KRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXX 287
+R+EFY RVGKAWKRGYLLYGPPGTGKSSL+AAMANYLKFD+YD++
Sbjct: 240 RRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVYDLQLASVMRDSDLRRLL 299
Query: 288 VSTGNRSILVIEDIDCSIELENR--QCGGGYDENNSQ--VTLSGLLNFVDGLWSSCGDER 343
++T NRSILVIEDIDC+++L NR Q G + SQ +TLSGLLNF+DGLWSSCGDER
Sbjct: 300 LATRNRSILVIEDIDCAVDLPNRIEQPVEGKNRGESQGPLTLSGLLNFIDGLWSSCGDER 359
Query: 344 IIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKS----HSMFDEIE 399
II+FTTN+K+RLDPALLRPGRMDMHI+M + + GFK LA NYL + H +F EIE
Sbjct: 360 IIIFTTNHKDRLDPALLRPGRMDMHIYMGHCSFQGFKTLASNYLGLSDAAMPHRLFPEIE 419
Query: 400 ELIKEVEVTPA---EEFMKSEDADVALNGLVDFL----LRKKE 435
LI +TPA EE MKSEDADVAL GLV+ L L+ KE
Sbjct: 420 RLIDGEVMTPAQVAEELMKSEDADVALEGLVNVLEKMRLKSKE 462
>TAIR|locus:2053109 [details] [associations]
symbol:AT2G18190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI01020552 RefSeq:NP_179411.2 UniGene:At.66217
ProteinModelPortal:F4IQG2 SMR:F4IQG2 EnsemblPlants:AT2G18190.1
GeneID:816332 KEGG:ath:AT2G18190 OMA:TRINTDM ArrayExpress:F4IQG2
Uniprot:F4IQG2
Length = 494
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 222/461 (48%), Positives = 299/461 (64%)
Query: 2 PSTSSV-LSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKFSDQLT 60
PS S++ LS + F A A L ++ +++ N +P++L+ ++ L F S LT
Sbjct: 3 PSISNISLSPSSLFTAYASLTGFLML-FRSLFNDEVPERLRSYITDLLNRFFTPKSKNLT 61
Query: 61 LIIEQSEGFSVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEG 120
++I++ GF N+++ AAE+YL +I P +LRV + P++K ++ I +G++++DTFE
Sbjct: 62 MVIDEIIGFKRNQVFDAAEVYLRNKIGPETARLRVGKLPKQKHFTIYIEKGEEILDTFEN 121
Query: 121 MQLTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAI 180
+L W V +EN+ AS+ + + L+F K +DKV+N YL +V S+
Sbjct: 122 SELRWTYVESENE-----------ASQKEKRYYELTFEKKLRDKVMNSYLSHVVAESEET 170
Query: 181 KETKKVIKLYS-----------LCAAD--AINLDHPSTFDTLAMDPVLKQALIDDLDRFV 227
K + +KLYS + A INL+HPSTF+TLAMDP K+ +IDD++RF+
Sbjct: 171 KRDLRAVKLYSRDVRASKDDDGMAGAGWGCINLEHPSTFETLAMDPGAKKKIIDDMERFL 230
Query: 228 KRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXX 287
KRREFY RVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFD++D+E
Sbjct: 231 KRREFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYENAQLKSIL 290
Query: 288 VSTGNRSILVIEDIDCS-IELENRQCGG--GYDENN-SQVTLSGLLNFVDGLWSSCGDER 343
+ST NRSILVIEDIDCS E+ +R+ Y+E +VTLSGLLNFVDGLWSS GDER
Sbjct: 291 LSTTNRSILVIEDIDCSSAEVVDREADEYQEYEEGYYGRVTLSGLLNFVDGLWSSFGDER 350
Query: 344 IIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIK--SHSMFDEIEEL 401
IIVFTTN+KERLDPALLRPGRMDMHI+MSY T GF+ L NYL + +H + +EIE L
Sbjct: 351 IIVFTTNHKERLDPALLRPGRMDMHINMSYCTGLGFRTLVSNYLGLGGLNHPLCEEIEAL 410
Query: 402 IKEVEVTPAE---EFMKSEDADVALNGLVDFLLRKKEQTMK 439
I EVTPAE E M+ +D DV L G+V F+ +K + K
Sbjct: 411 IDSTEVTPAELAEELMQEDDTDVVLRGVVSFVENRKVEISK 451
>TAIR|locus:2175956 [details] [associations]
symbol:AT5G17740 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2686349 IPI:IPI00523930
RefSeq:NP_197276.1 UniGene:At.65521 ProteinModelPortal:Q9FN77
SMR:Q9FN77 EnsemblPlants:AT5G17740.1 GeneID:831642
KEGG:ath:AT5G17740 TAIR:At5g17740 InParanoid:Q9FN77 OMA:MINTIIP
PhylomeDB:Q9FN77 Genevestigator:Q9FN77 Uniprot:Q9FN77
Length = 533
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 206/460 (44%), Positives = 294/460 (63%)
Query: 1 MPSTSSVLSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKFSDQLT 60
+PS +S+ STY + M+++ ++N + IP+ +Q+ + S L+ G S LT
Sbjct: 7 IPSPASMFSTYASMMGYVMIIKPMINTI-------IPRPVQNFVFSYLKSFAGSRSSTLT 59
Query: 61 LIIEQSEGFSV-NEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFE 119
L I+Q + +E+Y AA+ YLST+I+P+ +L +++ P EK + + +++G+ V D +
Sbjct: 60 LTIDQMSSMYIPDELYAAAQAYLSTKISPNSVRLIMARDPAEKKVKLYLSDGEVVSDVYN 119
Query: 120 GMQLTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKA 179
G++L W + T ++ Y +S LSF K +D V+N Y+PYV ++K
Sbjct: 120 GIKLKWRFLARNKNNTMVEEYGQSYQGNIQRESLELSFDKKHRDLVVNSYIPYVESKAKE 179
Query: 180 IKETKKVIKL--YSLCAA--DAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSR 235
+ ++++K+ YS A ++N HPSTFDT+AM+ LK+++I+DLDRFV R++FY R
Sbjct: 180 VNNKRRILKMHCYSHMAQTWQSVNFKHPSTFDTMAMNDDLKRSMIEDLDRFVGRKDFYKR 239
Query: 236 VGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSI 295
VGKAWKRGYLLYGPPGTGKSSL+AAMANYLKFDIYD++ ++T N SI
Sbjct: 240 VGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFDIYDLQLASVQGDAHLRSLLLATNNSSI 299
Query: 296 LVIEDIDCSIELENR-----QCGG--GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFT 348
L+IEDIDCS++L R + G + + +TLSGLLN +DGLWSSCG+ERII+FT
Sbjct: 300 LLIEDIDCSVDLPTRLQPPTETSQPLGAVQVSKPLTLSGLLNCIDGLWSSCGNERIIIFT 359
Query: 349 TNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIK-----SHSMFDEIEELIK 403
TN KE+LDPALLRPGRMDMHI+M + + GFK LA NYL + +H + +I+ LI
Sbjct: 360 TNNKEKLDPALLRPGRMDMHIYMGHCSFQGFKTLASNYLGLSDENDDTHPLCPDIKHLID 419
Query: 404 EVEVTPA---EEFMKSEDADVALNGLVDFLLRKKEQTMKC 440
+TPA EE MK EDAD AL GLV L RK+ + KC
Sbjct: 420 GHVLTPAQVAEELMKDEDADAALEGLVKVLKRKRLEPKKC 459
>TAIR|locus:2175946 [details] [associations]
symbol:AT5G17730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AB006706 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2686349 IPI:IPI00546054 RefSeq:NP_197275.1
UniGene:At.54888 ProteinModelPortal:Q9FN78 SMR:Q9FN78 PRIDE:Q9FN78
EnsemblPlants:AT5G17730.1 GeneID:831641 KEGG:ath:AT5G17730
TAIR:At5g17730 InParanoid:Q9FN78 OMA:DINCTIE PhylomeDB:Q9FN78
Genevestigator:Q9FN78 Uniprot:Q9FN78
Length = 470
Score = 970 (346.5 bits), Expect = 1.2e-97, P = 1.2e-97
Identities = 199/452 (44%), Positives = 284/452 (62%)
Query: 1 MPSTSSVLSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKFSDQLT 60
+PS + +S Y + M+++ L +T IP LQ+ + S L LT
Sbjct: 7 LPSLAPFVSAYASLTGYVMMIKPFLE----MT---IPPPLQNYMISYLNSFLHSTPSTLT 59
Query: 61 LIIEQS-EGFSVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFE 119
LII+ + NE+Y AA++Y+ST++ + ++LR+S+ EK++++ + G+ V D ++
Sbjct: 60 LIIDDHIKNGMYNELYGAAQVYISTKVNHNAERLRISRDRSEKNVNIHFSVGEVVSDIYQ 119
Query: 120 GMQLTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKA 179
G+++ W N+ + Y + + LSF K + VLN Y+PYV ++K
Sbjct: 120 GIEVKWRFCVDSNKSNMVHYFGEHFKLNPDRECVELSFEKKHTELVLNSYIPYVESKAKV 179
Query: 180 IKETKKVIKLYSLCAA----DAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSR 235
I +K++K+YS C ++NL+HPSTFDT+AM+ LK++++ DLDRF++R++FY R
Sbjct: 180 INNERKILKMYSYCCMYLKWQSVNLEHPSTFDTMAMNEELKRSVMGDLDRFIRRKDFYKR 239
Query: 236 VGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSI 295
VGK WKRGYLLYGPPGTGK+SL+AA+ANYLKFDIYD++ + T N SI
Sbjct: 240 VGKPWKRGYLLYGPPGTGKTSLVAAIANYLKFDIYDLQLASVREDADLRRLLLGTTNSSI 299
Query: 296 LVIEDIDCSIELENRQCGGGYDEN--NSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKE 353
L++EDIDC+++L R D+ +S +TLSGLL +DGLWSSCGDERI++FTT +KE
Sbjct: 300 LLVEDIDCAVDLHTRLQPKTQDDTKGSSMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKE 359
Query: 354 RLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKS---HSMFDEIEELIKEVEVTPA 410
RLDPALLRPGRMDMHIHM + FK LA NYL + H ++ EIE LIK +TPA
Sbjct: 360 RLDPALLRPGRMDMHIHMGHCCFDVFKTLASNYLGLSHDDPHHLYPEIERLIKGEVLTPA 419
Query: 411 ---EEFMKSEDADVALNGLVDFLLRKKEQTMK 439
EE MK+ED DVAL GLV L RK+ + K
Sbjct: 420 QVAEELMKNEDPDVALEGLVKVLKRKRLELEK 451
>TAIR|locus:2037186 [details] [associations]
symbol:AT1G43910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005783 EMBL:CP002684 GO:GO:0009506
GO:GO:0005524 GO:GO:0009737 GO:GO:0005794 HSSP:Q01853 GO:GO:0017111
EMBL:AC022314 UniGene:At.28764 UniGene:At.48277 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00548009 PIR:C96503 RefSeq:NP_175058.1
ProteinModelPortal:Q9LP11 SMR:Q9LP11 STRING:Q9LP11 PRIDE:Q9LP11
EnsemblPlants:AT1G43910.1 GeneID:840990 KEGG:ath:AT1G43910
InParanoid:Q9LP11 OMA:MWESTVF ProtClustDB:CLSN2679597
Genevestigator:Q9LP11 Uniprot:Q9LP11
Length = 475
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 189/437 (43%), Positives = 266/437 (60%)
Query: 1 MPSTSSVLSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGK-FSDQL 59
+PS S+V S YT+F+A ML RTILNE+ +P+++++ ++ K F F
Sbjct: 8 VPSVSAVFSLYTSFSAITMLFRTILNEI-------VPKRIREYIAMKAVDFFSSYFQSDF 60
Query: 60 TLIIEQSEGFSVNEIYQAAELYLSTRITP-SIQQLRVSQA----PR-EKSLSVTINEGQK 113
T +IEQ F N+ ++AAE+YL T + S +L V + P E L + +N K
Sbjct: 61 TFVIEQRWEFVENQTFRAAEVYLPTCLAGLSTGKLLVGSSNLKNPAAEPKLGIPVNT--K 118
Query: 114 VVDTFEGMQLTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYV 173
++D FEG+ L W L + E +K Y E + FHL+ K F++K++ Y Y+
Sbjct: 119 IIDNFEGIHLEWTLHSVETKK---------YLPEKRY--FHLTCKKEFREKIMTDYFTYL 167
Query: 174 AERSKAIKETKKVIKLYSL----CAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKR 229
A+ ++ I ++ +K+Y+ ++ +H +TF+TLA++P LK+ LIDDLD F K
Sbjct: 168 AKSAEKIMSHRENLKIYTYNQDRSKWESAIFEHHTTFETLAVEPDLKKTLIDDLDAFSKG 227
Query: 230 REFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVS 289
++F+ VG+AWKRGYLLYGPPGTGKSS++AA+AN++K+ IYD++ S
Sbjct: 228 KDFFKSVGRAWKRGYLLYGPPGTGKSSMVAAIANHMKYHIYDLQIQSVRDDGELREILTS 287
Query: 290 TGNRSILVIEDIDCSIELENRQCG------GGYDENNSQ---------VTLSGLLNFVDG 334
T NRSIL+IEDIDC + R+ GG D+ Q ++LSGLLNFVDG
Sbjct: 288 TKNRSILLIEDIDCGADASRRRQSKKKEEDGGEDDGEPQKRKKKFEVGISLSGLLNFVDG 347
Query: 335 LWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
LWSSCG+E+II+FTTN+KE+LDPALLRPGRMD+HI M TP FK L YLK H +
Sbjct: 348 LWSSCGEEKIIIFTTNHKEKLDPALLRPGRMDVHILMDNCTPFVFKKLVALYLKTDEHVL 407
Query: 395 FDEIEELIKEVEVTPAE 411
FD IE+LI EV TPAE
Sbjct: 408 FDPIEKLILEVSSTPAE 424
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 73/115 (63%), Positives = 88/115 (76%)
Query: 323 VTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKIL 382
++LSGLLNFVDGLWSSCG+E+II+FTTN+KE+LDPALLRPGRMD+HI M TP FK L
Sbjct: 336 ISLSGLLNFVDGLWSSCGEEKIIIFTTNHKEKLDPALLRPGRMDVHILMDNCTPFVFKKL 395
Query: 383 AFNYLKIKSHSMFDEIEELIKEVEVTPAE---EFMKSEDADVALNGLVDFLLRKK 434
YLK H +FD IE+LI EV TPAE + M S++AD+AL GL +FL KK
Sbjct: 396 VALYLKTDEHVLFDPIEKLILEVSSTPAEVTQQLMASKNADIALKGLAEFLENKK 450
>TAIR|locus:505006520 [details] [associations]
symbol:AT4G25835 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 EMBL:AY075607 IPI:IPI00532146
RefSeq:NP_567730.1 UniGene:At.32228 ProteinModelPortal:Q8RY66
SMR:Q8RY66 PRIDE:Q8RY66 EnsemblPlants:AT4G25835.1 GeneID:828689
KEGG:ath:AT4G25835 TAIR:At4g25835 InParanoid:Q8RY66 OMA:IMEKANE
PhylomeDB:Q8RY66 ProtClustDB:CLSN2687417 Genevestigator:Q8RY66
Uniprot:Q8RY66
Length = 506
Score = 535 (193.4 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 124/334 (37%), Positives = 185/334 (55%)
Query: 8 LSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKFSDQLTLIIEQSE 67
+ Y T AS + +L Q++ N P +L+ +S F FS I + +
Sbjct: 1 MKEYWTSLASLL---GVLAFCQSLMNSVFPPELRFAISKLFNKFFKLFSTFCYFDITEID 57
Query: 68 GFSVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQLTWEL 127
G + NE+Y A +LYLS+ ++ + +L +++A S++ ++ +VDTF + + WE
Sbjct: 58 GVNTNELYNAVQLYLSSSVSIAGNRLSLTRAVNSSSVTFGLSNNDSIVDTFNSVTVVWEH 117
Query: 128 VTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAIKETKKVI 187
+ T+ Q + + + F L K K+ +L+ YL Y+ E++ I+ +
Sbjct: 118 IVTQRQTQTFAWRP----MPEEKRGFTLRIKKKDKNLILDSYLDYIMEKANEIRRLNQDR 173
Query: 188 KLY------SLCAA----DAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVG 237
LY SL + +++ HPSTFDTLAMDPV KQ +++DL F + + FY R G
Sbjct: 174 LLYTNSRGGSLDSRGLPWESVPFKHPSTFDTLAMDPVKKQQIMEDLKDFAECQSFYERTG 233
Query: 238 KAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSILV 297
+AWKRGYLLYGPPGTGKSS+IAAMANYL++DIYD+E + T ++SI+V
Sbjct: 234 RAWKRGYLLYGPPGTGKSSMIAAMANYLRYDIYDLELTEVKSNSELRKLLMKTSSKSIIV 293
Query: 298 IEDIDCSIELENR---QCGGGYDENNSQVTLSGL 328
IEDIDCSI L NR Q G Y+E +T SGL
Sbjct: 294 IEDIDCSINLTNRNKKQSTGSYNEPE-MLTGSGL 326
Score = 286 (105.7 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 66/135 (48%), Positives = 84/135 (62%)
Query: 313 GGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
G + N+ +TLSGLLNF DGLWS CG ERI VFTTN+ E+LDPALLR GRMDMHIHMS
Sbjct: 327 GDDLGDGNT-ITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIHMS 385
Query: 373 YLTPGGFKILAFNYLKIKSHSMFD----EIEELIKEVEVTPA---EEFMKSE-DADVALN 424
Y T KIL NYL + + D E+ E++ E+TPA E +K+ D + A+
Sbjct: 386 YCTFSSVKILLRNYLGFEEGDLNDVVLKELAEVVDRAEITPADVSEALIKNRRDKERAVR 445
Query: 425 GLVDFLLRKKEQTMK 439
L+ L + E+ K
Sbjct: 446 ELLVDLRSRVERNEK 460
>TAIR|locus:2175976 [details] [associations]
symbol:AT5G17750 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00522104 RefSeq:NP_197277.1 UniGene:At.54890
ProteinModelPortal:F4KID5 SMR:F4KID5 EnsemblPlants:AT5G17750.1
GeneID:831643 KEGG:ath:AT5G17750 OMA:YIAYVER Uniprot:F4KID5
Length = 392
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 158/348 (45%), Positives = 233/348 (66%)
Query: 69 FS-VNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQLTWEL 127
FS + + + YLS++I+P +LR+++ P K++++ +++G+ V D ++G++L W
Sbjct: 44 FSYIKSFVGSPQAYLSSKISPDASKLRMTRDPNNKNVNLHLSQGEVVSDVYKGIELKWRY 103
Query: 128 VTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAIKETKKVI 187
+ N+KT++ + A + F LSF K KD V+ Y+ YV ++K IKE +++I
Sbjct: 104 LEGRNKKTTVVGEETEEAIVN-WQCFELSFDKKHKDLVVKSYIAYVERKAKVIKEERRII 162
Query: 188 KLYSLCAA----DAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
K++S + ++ +HPSTF T+AM P LK ++++DLDRF+KR+++Y RVGKAWKR
Sbjct: 163 KMHSYSSYTLRWQSVKFEHPSTFHTMAMTPKLKSSVMEDLDRFIKRKDYYKRVGKAWKRS 222
Query: 244 YLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDC 303
Y LYGPPGTGKSSL+AAMANYLKFDIYD++ ++T N SIL++EDIDC
Sbjct: 223 YFLYGPPGTGKSSLVAAMANYLKFDIYDLQLANVQGDAQLRSLLLATNNSSILLVEDIDC 282
Query: 304 SIELENRQCGG----GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPAL 359
S++L R G + ++ +TLSGLLN +DGLWSSCGDERI++FTTN KE LDPAL
Sbjct: 283 SVDLPTRLQPATTTLGAPKGSTPLTLSGLLNCIDGLWSSCGDERIVIFTTNNKEVLDPAL 342
Query: 360 LRPGRMDMHIHMSYLTPGGFKILAFNYLKIKS-----HSMFDEIEELI 402
LRPG MDMHI++ + + GFKILA NYL + H ++ +I+ LI
Sbjct: 343 LRPGCMDMHIYLGHCSFEGFKILASNYLGMPHDSDDPHRLYPDIKRLI 390
>TAIR|locus:2174502 [details] [associations]
symbol:AT5G57480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0465 GO:GO:0017111
EMBL:AB011482 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2687417 IPI:IPI00541799 RefSeq:NP_200556.1
UniGene:At.49428 ProteinModelPortal:Q9FKM3 SMR:Q9FKM3
EnsemblPlants:AT5G57480.1 GeneID:835852 KEGG:ath:AT5G57480
TAIR:At5g57480 InParanoid:Q9FKM3 OMA:HNNSELR PhylomeDB:Q9FKM3
Genevestigator:Q9FKM3 Uniprot:Q9FKM3
Length = 520
Score = 512 (185.3 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 117/314 (37%), Positives = 173/314 (55%)
Query: 8 LSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKFSDQLTLIIEQSE 67
+ Y T AS + +L Q++ P +L+ +F FS I + +
Sbjct: 1 MKEYWTSLASLL---GVLAFCQSLMQSIFPPELRFAFLKFFNRIFHVFSSYCYFDITEID 57
Query: 68 GFSVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQLTWEL 127
G + NE+Y A +LYLS+ ++ + +L +++A S++ ++ +VDTF G+ + WE
Sbjct: 58 GVNTNELYNAVQLYLSSSVSIAGNRLSLTRAVNSSSITFGLSNNDSIVDTFNGVTVLWEH 117
Query: 128 VTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAIKETKKVI 187
V T+ Q + + E + F L K K +LN YL Y+ ER+ I+ +
Sbjct: 118 VVTQRQTQTFAWRP--LPEEK--RGFTLRIKKKDKTLILNSYLDYIMERANEIRRKNQDR 173
Query: 188 KLY------SLCAA----DAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVG 237
LY SL + +++ HPSTF+TLAMDP KQ ++DDL F + + FY + G
Sbjct: 174 LLYTNSRGGSLDSRGHPWESVPFKHPSTFETLAMDPRKKQQIMDDLKDFAEGQVFYQKTG 233
Query: 238 KAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSILV 297
+AWKRGYLLYGPPGTGKSS+IAAMANYL +DIYD+E + T ++SI+V
Sbjct: 234 RAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHSNSELRKLLMKTSSKSIIV 293
Query: 298 IEDIDCSIELENRQ 311
IEDIDCSI L NR+
Sbjct: 294 IEDIDCSINLTNRK 307
Score = 280 (103.6 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 64/137 (46%), Positives = 88/137 (64%)
Query: 313 GGGYDE--NNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIH 370
GG +E N + +TLSGLLNF DGLWS CG ERI VFTTN+ E+LDPALLR GRMDMHI+
Sbjct: 333 GGSGEEGGNGNTITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIY 392
Query: 371 MSYLTPGGFKILAFNYLKIK----SHSMFDEIEELIKEVEVTPA---EEFMKSE-DADVA 422
MS+ KIL NYL + + E+E ++++ E+TPA E +K+ D + A
Sbjct: 393 MSFCNFPSLKILLKNYLGYGVEDINGDVLKEMEMVVEKAEMTPADVSEALIKNRRDKEKA 452
Query: 423 LNGLVDFLLRKKEQTMK 439
+ L++ L + E+ +K
Sbjct: 453 IRELLEDLKSRGERNVK 469
>TAIR|locus:2098648 [details] [associations]
symbol:AT3G28540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0017111
EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00530975 RefSeq:NP_189495.1 UniGene:At.42777
ProteinModelPortal:Q9LH82 SMR:Q9LH82 PRIDE:Q9LH82
EnsemblPlants:AT3G28540.1 GeneID:822484 KEGG:ath:AT3G28540
TAIR:At3g28540 InParanoid:Q9LH82 OMA:IITEAYL PhylomeDB:Q9LH82
ProtClustDB:CLSN2685225 ArrayExpress:Q9LH82 Genevestigator:Q9LH82
Uniprot:Q9LH82
Length = 510
Score = 438 (159.2 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 98/296 (33%), Positives = 167/296 (56%)
Query: 30 TITNQFIPQKLQDILSSKLEGLFGKFSDQLTL-IIEQSE--GFSVNEIYQAAELYLSTRI 86
++ QF+P +++D L +FG S+ + + E +E G ++ Y YLS++
Sbjct: 23 SVYRQFVPYQIRDYLEKCFYKMFGLVSNSVHIKFTEYTEDKGLKKSQAYDLIRNYLSSKS 82
Query: 87 TPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQLTWELVTTENQKTSLDYDSGLYAS 146
T Q+L+ +++ KSL ++++ + V D F+G+++ W L ++ + DS S
Sbjct: 83 TARAQRLKANESKNSKSLVLSLDNHEAVEDVFQGVKVVWSLSVWKSNDQA---DS----S 135
Query: 147 ETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAIKETKKVIKLYSLCAADA--------- 197
E + + LSF +++ + YL +V K I + KLY+ ++
Sbjct: 136 EKRYLT--LSFHNRYREMITTTYLDHVLREGKEIGLKNRERKLYTNNSSQDYSAWREGRW 193
Query: 198 --INLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKS 255
+ DHP+TF+TLAMD K+ + DL +F K +++Y +VGK WKRGYLL+GPPGTGKS
Sbjct: 194 SNVPFDHPATFETLAMDLEKKEGMKKDLIKFTKGKDYYRKVGKPWKRGYLLFGPPGTGKS 253
Query: 256 SLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQ 311
++I+AMAN+L++D+YD+E + T +SI+VIEDIDCS++L ++
Sbjct: 254 TMISAMANFLEYDVYDLELTTVKDNSELKKLMLDTKGKSIVVIEDIDCSLDLTGQR 309
Score = 338 (124.0 bits), Expect = 4.1e-75, Sum P(2) = 4.1e-75
Identities = 71/128 (55%), Positives = 92/128 (71%)
Query: 318 ENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPG 377
E S+VTLSGLLN +DGLWS+C E+IIVFTTNY ++LDPAL+R GRMD HI MSY
Sbjct: 338 ERESKVTLSGLLNAIDGLWSACSGEKIIVFTTNYLDKLDPALIRRGRMDNHIEMSYCRFE 397
Query: 378 GFKILAFNYLKIKSHSMFDEIEELIKEVEVTPA---EEFM-KSE--DADVALNGLVDFLL 431
FK+LA NYL+I+SH +F EI+ L++E +++PA E M KS+ DAD+ L LV L
Sbjct: 398 AFKVLAKNYLEIESHDLFGEIKRLVEETDMSPADVAENLMPKSDEDDADICLTRLVKSLE 457
Query: 432 RKKEQTMK 439
+KE+ K
Sbjct: 458 EEKEKAKK 465
>TAIR|locus:2095512 [details] [associations]
symbol:AT3G28580 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005524 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP000420 HSSP:Q9LCZ4 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 ProtClustDB:CLSN2685235
EMBL:AY072076 IPI:IPI00523143 RefSeq:NP_189499.1 UniGene:At.42770
ProteinModelPortal:Q9LJJ7 SMR:Q9LJJ7 STRING:Q9LJJ7
EnsemblPlants:AT3G28580.1 GeneID:822488 KEGG:ath:AT3G28580
TAIR:At3g28580 InParanoid:Q9LJJ7 OMA:PRSKTKD PhylomeDB:Q9LJJ7
ArrayExpress:Q9LJJ7 Genevestigator:Q9LJJ7 Uniprot:Q9LJJ7
Length = 500
Score = 448 (162.8 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 98/296 (33%), Positives = 164/296 (55%)
Query: 28 VQTITNQFIPQKLQDILSSKLEGLFGKFSDQLTLIIEQSEG--FSVNEIYQAAELYLSTR 85
V TI QF P L L LFG+F + + + G F +E Y + YLS
Sbjct: 21 VYTIFKQFFPL-FGPQLEPFLYRLFGRFYPYIQITFHEYSGEHFKRSEAYLGIQSYLSKD 79
Query: 86 ITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQLTWELVTTENQKTSLDYDSGLYA 145
+ ++L+ + KS+ +++++ +++ D FEG+++ W+ ++K S +
Sbjct: 80 SSARAKKLKANTTKGSKSIVLSMDDKEEITDDFEGIRVWWQ-----SKKEGATRQSFSFY 134
Query: 146 SETAHKSFH-LSFSKLFKDKVLNKYLPYVAERSKAIKETKKVIKLYSLCAADA------- 197
E K ++ L F + ++ ++ +YL +V K I++ + KLYS +
Sbjct: 135 PEANEKRYYMLRFHRRDREVIIERYLEHVMREGKTIEQKNRERKLYSNTPGQSHGNNSKW 194
Query: 198 --INLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKS 255
+ +HP+TFDTLAM+ K+ + DL +F K +++Y ++GKAWKRGYLL+GPPGTGKS
Sbjct: 195 SHVTFEHPATFDTLAMEENKKEEIKSDLIKFSKSKDYYKKIGKAWKRGYLLFGPPGTGKS 254
Query: 256 SLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQ 311
++IAAMAN+L++D+YD+E + T +SI+VIEDIDCS+ L ++
Sbjct: 255 TMIAAMANFLEYDVYDLELTTVKDNTHLRRLLIETSAKSIIVIEDIDCSLNLTGQR 310
Score = 327 (120.2 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 73/150 (48%), Positives = 98/150 (65%)
Query: 299 EDIDCSIELENRQCGGGYDENN-SQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDP 357
ED D +E + EN S+VTLSGLLNF+DGLWS+CG ERIIVFTTN+ ++LDP
Sbjct: 318 EDGDDKNTIEKKMMMKNEGENKESKVTLSGLLNFIDGLWSACGGERIIVFTTNFVDKLDP 377
Query: 358 ALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEEL--IKEVEVTPA---EE 412
AL+R GRMD HI MSY FK+LA NYL ++ MF+EI+ L ++E+++TPA E
Sbjct: 378 ALIRKGRMDKHIEMSYCCFEAFKVLAKNYLDVEESEMFEEIKRLLEVEEIKMTPADVGEN 437
Query: 413 FM-KSED--ADVALNGLVDFLLRKKEQTMK 439
+ KSE + L L++ L +KE+ K
Sbjct: 438 LLPKSEKEGGETCLKRLIEALKEEKEEAKK 467
>TAIR|locus:2095537 [details] [associations]
symbol:AT3G28610 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AP000420 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00535388
RefSeq:NP_189502.2 UniGene:At.50994 ProteinModelPortal:Q9LJJ5
SMR:Q9LJJ5 DNASU:822491 EnsemblPlants:AT3G28610.1 GeneID:822491
KEGG:ath:AT3G28610 TAIR:At3g28610 InParanoid:Q9LJJ5 OMA:KETNIAP
PhylomeDB:Q9LJJ5 ProtClustDB:CLSN2685234 Genevestigator:Q9LJJ5
Uniprot:Q9LJJ5
Length = 474
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 176/459 (38%), Positives = 255/459 (55%)
Query: 9 STYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKL--EGLFGKFSDQLTLIIEQS 66
S + F A + + N ++ +F +Q I +K + FS + + +
Sbjct: 9 SLASLFFLWATIQQIFPNHLKIAIKEFFLSTIQQISFAKRFSDKFINFFSPYVQINFSEY 68
Query: 67 EGFSVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQLTWE 126
E + VN + E YL + T + LR SQ K L + +E KV D +EG+++ WE
Sbjct: 69 EDYRVNHAFDPIETYLGAKATDKAKHLRASQVRESKGLVLKRDE-TKVRDEYEGIRVWWE 127
Query: 127 LVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAIKETKKV 186
+ T DS Y K+ L+F + +D V N Y+ YV E K+I K
Sbjct: 128 MET----------DSAGY------KTLKLTFHRRSRDIVTNSYIKYVVEEGKSIDAKNKK 171
Query: 187 IKLYSLCAADA-----------INLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSR 235
+KL++ + I+ +HP+TF+TLAMDP K+ +++DL F +++Y +
Sbjct: 172 MKLFTNNPSSHWGSSKTSFWRYIDFEHPATFETLAMDPKKKEQILNDLAAFNNGKDYYKK 231
Query: 236 VGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSI 295
+GKAWKRGYLLYGPPGTGKS++IAAMAN L + IYD+E +T N+SI
Sbjct: 232 IGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYSIYDLELTAIQNNSELRKILTATSNKSI 291
Query: 296 LVIEDIDCSIELENRQC-----------GGGYD--ENNSQVTLSGLLNFVDGLWSSCGDE 342
+VIEDIDCS++L ++ G D EN S VTLSGLLNF+DG+WS+CG E
Sbjct: 292 IVIEDIDCSLDLTGKRKKKESNLMIWRKDGDQDNEENKSFVTLSGLLNFIDGIWSACGQE 351
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEELI 402
RIIVFTTN+ +LDPAL+R GRMDMHI +SY T FK LA NYL + SH +F +IE L+
Sbjct: 352 RIIVFTTNHLAKLDPALIRRGRMDMHIELSYCTFEAFKTLAKNYLDLDSHPLFSKIESLM 411
Query: 403 KEVEVTPAE--EFMKSEDADVALNGLVDFLLRKKEQTMK 439
KE + PA+ E + ++ + +G ++ L+ E+ K
Sbjct: 412 KETNIAPADVAENLMKKNRETDADGSLNDLIESLERKKK 450
>TAIR|locus:2095502 [details] [associations]
symbol:AT3G28570 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00542062 RefSeq:NP_189498.1 UniGene:At.53543
ProteinModelPortal:F4J0B7 SMR:F4J0B7 EnsemblPlants:AT3G28570.1
GeneID:822487 KEGG:ath:AT3G28570 OMA:IHAMELE Uniprot:F4J0B7
Length = 451
Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 174/441 (39%), Positives = 254/441 (57%)
Query: 28 VQTITNQFIPQKLQDILSSKLEGL--FGKFSDQLT--------LIIEQSEGFSVNEIYQA 77
V + ++ P+++Q +L + ++ + F + SD++ + + EG+ N + A
Sbjct: 19 VWSTLKRYFPRQIQQLLFNAIQRIPIFKRLSDKILEFFSPYAYIRFREIEGYRYNYAFAA 78
Query: 78 AELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQLTWELVTTENQKTSL 137
+ YL ++ ++ L+ +Q SL + + K+ + +EG+++ WE+ K
Sbjct: 79 VKTYLGAKVNSEVKNLKGNQVKENMSLDLK-RDDVKIEEEYEGVKMWWEIFRCVKGK--- 134
Query: 138 DYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAIKETKKVIKLY----SLC 193
K L+F + D V YL YV E K+IK KK + + SL
Sbjct: 135 -------------KICRLTFHRSNWDVVTGSYLRYVVEEGKSIKARKKKVMVLMNNPSLN 181
Query: 194 AADAIN-------LDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLL 246
++ +HP+TFDTLAMD K + DL F +E+Y R+GKAWKRGYLL
Sbjct: 182 WKTSMKGLWTCTEFEHPATFDTLAMDIDKKDEIFRDLVAFRDGKEYYDRIGKAWKRGYLL 241
Query: 247 YGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIE 306
YGPPGTGKS++IAAMAN +K++IYD+E ++T N+SI+VIEDIDCS++
Sbjct: 242 YGPPGTGKSTMIAAMANLMKYNIYDLELTSIGNNWELKKLLIATTNKSIIVIEDIDCSLD 301
Query: 307 L----ENRQCGGGYDENNSQ-VTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLR 361
L E + G + S VTLSGLLNF+DG+WS+CG ERI+VFTTN+ +LD AL+R
Sbjct: 302 LTGEREVKDLKGDKEGKKSNAVTLSGLLNFIDGIWSACGQERILVFTTNHVGKLDQALIR 361
Query: 362 PGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEELIKEVEVTPAE--EFMKSEDA 419
GRMDMHI +SY T G FKILA NYL I SH +F EIE L+KE ++TPA+ E M +++
Sbjct: 362 RGRMDMHIELSYCTFGAFKILAKNYLNIDSHHLFGEIESLLKETKITPADVAEHMMAKEV 421
Query: 420 DVALNGLVDFLLRKK-EQTMK 439
D +L GL+ L R K Q +K
Sbjct: 422 DGSLKGLIRALERIKWSQNVK 442
>TAIR|locus:2098658 [details] [associations]
symbol:AT3G28510 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005783 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2685225 EMBL:AY099692
IPI:IPI00532130 RefSeq:NP_189492.1 UniGene:At.42784
ProteinModelPortal:Q9LH84 SMR:Q9LH84 PaxDb:Q9LH84
EnsemblPlants:AT3G28510.1 GeneID:822481 KEGG:ath:AT3G28510
TAIR:At3g28510 InParanoid:Q9LH84 OMA:YLEIETH PhylomeDB:Q9LH84
ArrayExpress:Q9LH84 Genevestigator:Q9LH84 Uniprot:Q9LH84
Length = 530
Score = 422 (153.6 bits), Expect = 2.3e-72, Sum P(2) = 2.3e-72
Identities = 95/294 (32%), Positives = 162/294 (55%)
Query: 31 ITNQFIPQKLQDILSSKLEGLFGKFSDQLTLIIEQ--SEGFSVNEIYQAAELYLSTRITP 88
I Q++P + + + G S + + + EG ++ Y + YL+++ T
Sbjct: 24 IYKQYVPAHFRAYVERYFHKMIGWISYYVDIKFTEYTDEGLKRSQAYDSIRNYLASKSTA 83
Query: 89 SIQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQLTWELVTTENQKTSLDYDSGLYASET 148
++L+ ++ KSL ++++ +++ D FEG+++ W Q S +Y G +SE
Sbjct: 84 LAKRLKANETKNSKSLVFSMDDHEEIEDEFEGVKVKWYSNVKVIQPQS-NY--GQRSSEE 140
Query: 149 AHKSFHLSFSKLFKDKVLNKYLPYVAERSKAIKETKKVIKLYSLCAADA----------- 197
+ F LSF + + ++ YL +V KAI + KLY+ ++
Sbjct: 141 -RRHFTLSFHRRHRGMIIETYLDHVLREGKAIGLMNRERKLYTNNSSQEWYPWRSGKWSN 199
Query: 198 INLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL 257
+ HP+TF+TLAMDP K+ + DL +F K +++Y +VGK WKRGYLL+GPPGTGKS++
Sbjct: 200 VPFHHPATFETLAMDPEKKEGIKKDLIKFSKGKDYYKKVGKPWKRGYLLFGPPGTGKSTM 259
Query: 258 IAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQ 311
IAA+AN+L +D+YD+E + T ++SI+VIEDIDCS++L ++
Sbjct: 260 IAAIANFLDYDVYDLELTTVKDNSELKKLLLDTTSKSIIVIEDIDCSLDLTGQR 313
Score = 328 (120.5 bits), Expect = 2.3e-72, Sum P(2) = 2.3e-72
Identities = 68/129 (52%), Positives = 92/129 (71%)
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTP 376
D+ S+VTLSGLLN +DGLWS+C E+IIVFTTN+ ++LDPAL+R GRMD HI MSY
Sbjct: 338 DDKQSKVTLSGLLNSIDGLWSACSGEKIIVFTTNFVDKLDPALIRRGRMDNHIEMSYCKF 397
Query: 377 GGFKILAFNYLKIKSHSMFDEIEELIKEVEVTPA---EEFM-KS--EDADVALNGLVDFL 430
FK+LA NYL+I++H ++ EIE ++E +++PA E M KS EDAD+ + LV L
Sbjct: 398 EAFKVLAKNYLEIETHDLYGEIERKLEETDMSPADVAETLMPKSDEEDADICIKRLVKTL 457
Query: 431 LRKKEQTMK 439
+KE+ K
Sbjct: 458 EEEKEKARK 466
>TAIR|locus:2178067 [details] [associations]
symbol:AATP1 "AAA-ATPase 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010154
"fruit development" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0010431 EMBL:AB010077 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00538441
RefSeq:NP_198817.1 UniGene:At.65609 ProteinModelPortal:Q9FLD5
SMR:Q9FLD5 PRIDE:Q9FLD5 EnsemblPlants:AT5G40010.1 GeneID:833998
KEGG:ath:AT5G40010 TAIR:At5g40010 InParanoid:Q9FLD5 OMA:HEEITDE
PhylomeDB:Q9FLD5 ProtClustDB:CLSN2685235 Genevestigator:Q9FLD5
Uniprot:Q9FLD5
Length = 514
Score = 433 (157.5 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 89/297 (29%), Positives = 163/297 (54%)
Query: 28 VQTITNQFIPQKLQDILSSKLEGLFGKFSDQLTLIIEQSEG--FSVNEIYQAAELYLSTR 85
+ TI +F P +L++ + L G + + + G F +++Y A + YLS
Sbjct: 21 IYTIFERFFPYRLREHFEPLAQSLIGFIYPYIQITFHEYSGERFKRSDVYDAIQSYLSKD 80
Query: 86 ITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQLTWELVTTENQKTSLDYDSGLYA 145
+ ++L + KS+ +++++ +++ D F+G+++ W+ +++ ++ + Y
Sbjct: 81 SSSRAKKLTANTIKGNKSIILSMDDHEEITDEFQGVKVWWQSKKHQSESRAISF----YP 136
Query: 146 SETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAIKETKKVIKLYSLCAADA-------- 197
+ + L F + ++ + KYL +V K I+ + KLYS +
Sbjct: 137 KADESRFYMLKFHRRDREVITKKYLNHVISEGKTIEVKNRERKLYSNNPSQNWSGYKQTK 196
Query: 198 ---INLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGK 254
+ +HP+TFDTLAM+ K+ + +DL +F +++Y ++GKAWKRGYLL+GPPGTGK
Sbjct: 197 WSHVTFEHPATFDTLAMEYKKKEEIKNDLIKFSNSKDYYKKIGKAWKRGYLLFGPPGTGK 256
Query: 255 SSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQ 311
S++IAAMAN L++D+YD+E + T +SI+VIEDIDCS++L ++
Sbjct: 257 STMIAAMANLLEYDVYDLELTTVKDNTELRRLLIETSGKSIIVIEDIDCSLDLTGQR 313
Score = 316 (116.3 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 71/152 (46%), Positives = 99/152 (65%)
Query: 299 EDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPA 358
ED IE + ++ G + S+VTLSGLLNF+DGLWS+CG ERIIVFTTN+ ++LDPA
Sbjct: 323 EDETSPIEKQMKKDQG--ENKGSKVTLSGLLNFIDGLWSACGGERIIVFTTNFIDKLDPA 380
Query: 359 LLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKS---HSMFDEIEEL--IKEVEVTPA--- 410
L+R GRMD HI MSY FK+LA NYL K + +FDEI+ L ++E+++TPA
Sbjct: 381 LIRKGRMDKHIEMSYCGFEAFKVLANNYLDAKEEDDNELFDEIKRLLEVEEIKMTPADVG 440
Query: 411 EEFMKS---EDADVALNGLVDFLLRKKEQTMK 439
E +K E ++ L L++ L +KE+ +
Sbjct: 441 ENLLKKSEVETKEICLKRLIEALKEEKEEAKR 472
Score = 45 (20.9 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 396 DEIEELIKEVEVTPAEEFMKSEDAD-----VALNGLVDFL 430
DE E+ E E +P E+ MK + + V L+GL++F+
Sbjct: 318 DEEED---EDETSPIEKQMKKDQGENKGSKVTLSGLLNFI 354
>TAIR|locus:2128916 [details] [associations]
symbol:AT4G30250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00517260 RefSeq:NP_194754.2 UniGene:At.65015
ProteinModelPortal:F4JPK8 SMR:F4JPK8 EnsemblPlants:AT4G30250.1
GeneID:829148 KEGG:ath:AT4G30250 Uniprot:F4JPK8
Length = 519
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 174/456 (38%), Positives = 249/456 (54%)
Query: 8 LSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKFSDQLTLIIEQSE 67
+S Y T AS + +L QTI P +L+ L + FS + I + +
Sbjct: 1 MSDYWTTMASLL---GMLAFCQTIVQLVFPPELRLAFLHFLTRIRHVFSSHIYFDITEID 57
Query: 68 GFSVNEIYQAAELYLSTRIT--PSIQ------QLRVSQAPREKSLSVTINEGQKVVDTFE 119
G + NE+Y A +LYLS+ +T ++ +L +++ P S++ ++ ++ D F
Sbjct: 58 GVNTNELYNAVQLYLSSSVTVNDAVSSSNNNTRLSLTRVPNSSSVTFGLSNNDRITDVFN 117
Query: 120 GMQLTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKA 179
G+ + WE V + Q S + + F L +K K VL+ YL Y+ +S+
Sbjct: 118 GVTILWEHVVVQRQVQSFSWRP----MPEEKRGFTLQINKRDKALVLDSYLDYIVGKSEE 173
Query: 180 IKETKKVIKLY------SLCAA----DAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKR 229
I+ + LY SL A D++ HPSTFDTLAMDP K+ +++DL F
Sbjct: 174 IRRRNEERLLYTNSRGVSLDARSHPWDSVRFKHPSTFDTLAMDPEKKKRIMEDLREFANG 233
Query: 230 REFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVS 289
+ FY + G+AWKRGYLLYGPPGTGKSSLIAAMANYL +DIYD+E +
Sbjct: 234 QGFYQKTGRAWKRGYLLYGPPGTGKSSLIAAMANYLGYDIYDLELTEVQNNSELRKLLMK 293
Query: 290 TGNRSILVIEDIDCSIEL----ENRQCGGGYD------------ENNSQVTLSGLLNFVD 333
T ++SI+VIEDIDCSI L +N++ G Y+ E S VTLSGLLNF D
Sbjct: 294 TSSKSIIVIEDIDCSISLTKRGKNKKKNGSYEYDPGLTNGSGLEEPGSSVTLSGLLNFTD 353
Query: 334 GLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHS 393
GLWS CG E+I VFTTN+ E+LD AL+R GRMDMH+HM + KIL NYL+++
Sbjct: 354 GLWSCCGSEKIFVFTTNHIEKLDSALMRSGRMDMHVHMGFCKFPALKILLKNYLRLEEED 413
Query: 394 MFDEIEELIKEVEVTPAE-EFMKSEDADVALNGLVD 428
M D + ++KE+E E E ++ ++V + D
Sbjct: 414 M-DSV--VLKEMEECVEEAEITPADVSEVLIRNRSD 446
>TAIR|locus:2178057 [details] [associations]
symbol:AT5G40000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00516295 RefSeq:NP_198816.1 UniGene:At.51146
ProteinModelPortal:F4KFX5 SMR:F4KFX5 EnsemblPlants:AT5G40000.1
GeneID:833997 KEGG:ath:AT5G40000 OMA:ISAMANY Uniprot:F4KFX5
Length = 470
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 167/459 (36%), Positives = 260/459 (56%)
Query: 5 SSVLSTYTTFAASAMLVRTILNEVQTIT-NQFIPQKLQDI-LSSKLEGLFGK-FSDQLTL 61
SS+ S + +A ++ I + IT +F+ Q + + ++ F FS + +
Sbjct: 13 SSMASLFFLWAT----IQQIFPDHLKITIKEFLLSSFQQLCFAQRVSDHFTNLFSPYVEI 68
Query: 62 IIEQSEGFSVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEGM 121
+S+ +S N+ + A + YL ++ T + LR SQ K L + NE KV D ++G
Sbjct: 69 HFPESDEYSFNQAFSAIDTYLDSKATDKTKHLRGSQVKESKGLVLKRNEA-KVRDEYKGA 127
Query: 122 QLTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAIK 181
+ WE V +D D Y + L+F + + N Y+ YV E K+I
Sbjct: 128 NVWWERV--------VDNDGNRY--------YKLTFHNRARTLITNSYIKYVVEEGKSII 171
Query: 182 ETKKVIKLYSLCAAD----------AINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRRE 231
K +L++ + +I +HP++F TLAMDP K+ +++DL F +E
Sbjct: 172 VKNKQTRLFTNNLSTQWVFGQNMWRSIEFEHPASFQTLAMDPKKKEEIVNDLIAFSNGKE 231
Query: 232 FYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTG 291
+Y ++GKAWKRGYLLYGPPGTGKS++I+AMAN L ++IYD+E +T
Sbjct: 232 YYKKIGKAWKRGYLLYGPPGTGKSTMISAMANLLNYNIYDLELTAVKNNSELKKLLTATS 291
Query: 292 NRSILVIEDIDCSI---------ELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
++SI+VIEDIDCS E +R+ G D++ + VTLSGLLNF+DG+WS+CG E
Sbjct: 292 SKSIIVIEDIDCSADFTSNRIKKESNSRERYGKEDKDENSVTLSGLLNFIDGIWSACGQE 351
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIK---SHSMFDEIE 399
RI+VFTTN+ E+LDPAL+R GRMDMHI +SY T FKILA NYL + +H +F EI+
Sbjct: 352 RIVVFTTNHLEKLDPALIRRGRMDMHIELSYCTYEAFKILAKNYLDLDGDDAHPLFSEIK 411
Query: 400 ELIKEVEVTPAE--EFMKSEDADVALNGLVDFLLRKKEQ 436
L++E +++PA+ E + + + + ++ ++ L+ E+
Sbjct: 412 ALLEETKISPADVAENLMARNQQIDVDKSLNLLISALEE 450
>TAIR|locus:2098638 [details] [associations]
symbol:AT3G28520 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00524283 RefSeq:NP_189493.1 UniGene:At.53541
ProteinModelPortal:F4J0B1 SMR:F4J0B1 PRIDE:F4J0B1
EnsemblPlants:AT3G28520.1 GeneID:822482 KEGG:ath:AT3G28520
OMA:YLENESH ArrayExpress:F4J0B1 Uniprot:F4J0B1
Length = 478
Score = 385 (140.6 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 98/319 (30%), Positives = 169/319 (52%)
Query: 34 QFIPQKLQDILSSK----LEGLFGKFSDQLTLIIEQ--SEGFSVNEIYQAAELYLSTRIT 87
QF+P +L++ L + L+ LF + S+ + + + EG S + Y YLS+ T
Sbjct: 13 QFVPYQLREYLENTIQKYLDKLFRRDSNFVYIRFPEYTGEGLSKSRAYDEIGNYLSSIST 72
Query: 88 PSIQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQLTWELVTTENQKTSLDYDSGLYASE 147
++L+ ++ KSL + +++ + VV F+G+ + W T +++ + G Y +
Sbjct: 73 ARAKRLKAKESENSKSLVLCLDDDEAVVVVFQGVNVVWSS-TVVDKEDKHNSKEGRYLT- 130
Query: 148 TAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAIKETKKVIKLYSLCAADA---------- 197
L+F +D + N Y+ +V K I + KLY+ + +
Sbjct: 131 -------LTFENHHRDIITNTYIDHVLREGKEIALKNRERKLYTNNDSSSYSSWWEGLWS 183
Query: 198 -INLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSS 256
+ +H ++F+TL MD K+ + DL +F K +++Y +V K WKRGYLL+GPPGTGKS+
Sbjct: 184 NVPFNHHASFETLGMDLDKKEEIKKDLIKFTKGKDYYRKVAKPWKRGYLLFGPPGTGKST 243
Query: 257 LIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIEL-ENRQCGGG 315
+I+A+AN+L++D+YD+E + T +SI+VIEDIDCS+EL E+R+
Sbjct: 244 MISAIANFLEYDVYDLELTTVKDNAELKKLMLDTKGKSIVVIEDIDCSLELTEHRKKKKE 303
Query: 316 YDENNSQVTLSGLLNFVDG 334
DE+ + + L V G
Sbjct: 304 EDEDKEEKKEAENLKRVSG 322
Score = 328 (120.5 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 73/147 (49%), Positives = 100/147 (68%)
Query: 299 EDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPA 358
ED + E EN + G +E+N VTLSGLLN +DGLWS+C DE+II+FTTN+ + LDPA
Sbjct: 306 EDKEEKKEAENLKRVSGNNESN--VTLSGLLNAIDGLWSACSDEKIIIFTTNFVDNLDPA 363
Query: 359 LLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEELIKEVEVTPA---EEFM- 414
L+R GRMD HI MSY FK+LA NYL+ +SH ++ EI L++EV+V+PA E M
Sbjct: 364 LIRRGRMDYHIEMSYCRFEAFKVLAKNYLENESHDLYGEIGRLLEEVDVSPADVAENLMP 423
Query: 415 KSE--DADVALNGLVDFLLRKKEQTMK 439
KS+ DAD+ LV L +K++ ++
Sbjct: 424 KSDEDDADICFRRLVKSLEEEKKKKIE 450
>TAIR|locus:2115954 [details] [associations]
symbol:AT4G05380 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AL161503 HOGENOM:HOG000237995 IPI:IPI00526918
PIR:F85067 RefSeq:NP_192447.1 UniGene:At.54165
ProteinModelPortal:Q9M0V7 SMR:Q9M0V7 STRING:Q9M0V7 PaxDb:Q9M0V7
PRIDE:Q9M0V7 EnsemblPlants:AT4G05380.1 GeneID:825886
KEGG:ath:AT4G05380 TAIR:At4g05380 InParanoid:Q9M0V7 OMA:DETEYGE
PhylomeDB:Q9M0V7 ProtClustDB:CLSN2916038 Genevestigator:Q9M0V7
Uniprot:Q9M0V7
Length = 248
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 132/238 (55%), Positives = 165/238 (69%)
Query: 211 MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIY 270
M+P LK LI DLD F ++F+ VG+AWKRGYLLYGPPGTGKSSL+AA+AN++ + IY
Sbjct: 1 MEPELKNTLIRDLDAFSNGKDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIY 60
Query: 271 DMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCS-----IELENR-QCGGGYDENNSQ-- 322
D++ ST NRSIL+IED+DCS EN+ + G ++N +
Sbjct: 61 DLQIQSVKDDAMLRQILTSTENRSILLIEDLDCSGADTTCRKENKDETEYGENQNKKKKK 120
Query: 323 ---VTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGF 379
VTLSGLLNFVDGLWSSC +ERII+FTTN+KE+LDPALLRPGRMD+HI M Y TP F
Sbjct: 121 DPKVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHILMDYCTPIVF 180
Query: 380 KILAFNYLKIKSHSMFDEIEELIKEVEVTPAE---EFMKSEDADVALNGLVDFLLRKK 434
K LA YL+I+ H +FD IE++ EV+ TPAE + M S+D DV L GLV+FL KK
Sbjct: 181 KKLAALYLEIEEHELFDPIEKMFLEVKATPAEITEKLMVSKDPDVTLKGLVEFLESKK 238
>TAIR|locus:2095532 [details] [associations]
symbol:AT3G28600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00518678 RefSeq:NP_189501.2 UniGene:At.42766
ProteinModelPortal:F4J0C0 SMR:F4J0C0 DNASU:822490
EnsemblPlants:AT3G28600.1 GeneID:822490 KEGG:ath:AT3G28600
OMA:TISHRVA ArrayExpress:F4J0C0 Uniprot:F4J0C0
Length = 477
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 128/256 (50%), Positives = 175/256 (68%)
Query: 198 INLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL 257
I+ +HP++F TLAMD K+ +++DL F +E+Y ++GKAWKRGYLL+GPPGTGKS++
Sbjct: 195 IDFEHPASFHTLAMDTKKKEEILNDLAAFSNGKEYYKKIGKAWKRGYLLHGPPGTGKSTM 254
Query: 258 IAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELE--------- 308
IAAMAN+L + IYD+E +T ++SI+VIEDIDCS++L
Sbjct: 255 IAAMANHLNYSIYDLELTAIRNNSELRKLLTATSSKSIIVIEDIDCSLDLTGKRKKEKNL 314
Query: 309 --NRQCGG-GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRM 365
+R+ G G +E+ S VTLSGLLNF+DG+WS+CG ERII+FTTN+ E+LDPAL+R GRM
Sbjct: 315 MTSREDGEQGTEEDKSFVTLSGLLNFIDGIWSACGQERIIIFTTNHFEKLDPALIRRGRM 374
Query: 366 DMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEELIKEVEVTPA---EEFMKSE---DA 419
DMHI +SY + FKILA NYL + +H +F +IE L+KE ++ PA E MK DA
Sbjct: 375 DMHIELSYCSFEAFKILAKNYLDLDTHPLFKKIESLLKETKIAPADVAENLMKKNTEIDA 434
Query: 420 DVALNGLVDFLLRKKE 435
D +L L+ L KK+
Sbjct: 435 DGSLKDLIQALEGKKK 450
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 102/319 (31%), Positives = 169/319 (52%)
Query: 13 TFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGL--FGKFSDQ-LTLIIEQSE-G 68
TF +S + + +Q I + +++ L S ++ L +FSD+ + E
Sbjct: 6 TFGSSLASLFFLWATIQQIFPNHLRIAIKEFLISTIQQLSFVQRFSDRFINFFSPYVEIS 65
Query: 69 FSVNEIYQAAELY--LSTRI-TPSIQQLRVSQAPREK-SLSVTINEGQ-KVVDTFEGMQL 123
FS E YQ + + T + + + + +A + K S + + + KV D +EG +
Sbjct: 66 FSQYEDYQFNHAFAAIETYLGAKATDKAKHLRASQVKESKGLVLKRDETKVRDEYEGGTV 125
Query: 124 TWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAIKET 183
WE+ T DS T +++F L+F + +D V + Y+ YV E K+I+
Sbjct: 126 WWEMET----------DS------TGYRTFKLTFHRRSRDIVTDSYIKYVFEEGKSIQAK 169
Query: 184 KKVIKLYSLCAADA-----------INLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREF 232
K +KL++ + I+ +HP++F TLAMD K+ +++DL F +E+
Sbjct: 170 SKQMKLFTNNPSSHWGTSKKSFWRYIDFEHPASFHTLAMDTKKKEEILNDLAAFSNGKEY 229
Query: 233 YSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGN 292
Y ++GKAWKRGYLL+GPPGTGKS++IAAMAN+L + IYD+E +T +
Sbjct: 230 YKKIGKAWKRGYLLHGPPGTGKSTMIAAMANHLNYSIYDLELTAIRNNSELRKLLTATSS 289
Query: 293 RSILVIEDIDCSIELENRQ 311
+SI+VIEDIDCS++L ++
Sbjct: 290 KSIIVIEDIDCSLDLTGKR 308
>TAIR|locus:2039981 [details] [associations]
symbol:AT2G46620 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 IPI:IPI00525526
RefSeq:NP_182185.2 UniGene:At.19721 ProteinModelPortal:F4IJ77
SMR:F4IJ77 EnsemblPlants:AT2G46620.1 GeneID:819274
KEGG:ath:AT2G46620 OMA:CDDLRAL InterPro:IPR025753 Pfam:PF14363
Uniprot:F4IJ77
Length = 491
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 123/373 (32%), Positives = 195/373 (52%)
Query: 58 QLTLIIEQSEGFSVNEIYQAAELYLSTRITPSIQQ---LRVSQAPREKSLSVTINEGQKV 114
Q + E ++ N +YQ +YL++ SI+ + + + + ++ Q V
Sbjct: 49 QFYKVPEFNDNVQENHLYQKVYMYLNS--LSSIENSDFTNLFTGKKSNEIILRLDRNQVV 106
Query: 115 VDTFEGMQLTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVA 174
D F G ++ W + E+ E ++F L K K ++L YL ++
Sbjct: 107 GDEFLGARVCW--INGED--------------EDGARNFVLKIRKADKRRILGSYLQHIH 150
Query: 175 ERSKAIKETKKVIKLYSLCAAD--------------AINLDHPSTFDTLAMDPVLKQALI 220
S +++ +KL+ D +I DHP TFD +AM+ LK +
Sbjct: 151 TVSDELEQRNTELKLFINVGIDDHLNKKKKKNGRWRSIPFDHPCTFDNIAMETDLKNKVK 210
Query: 221 DDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXX 280
DL+ F+K +++Y+R+G+ WKR YLLYGP GTGKSS +AAMAN+L +D+YD++
Sbjct: 211 SDLESFLKGKQYYNRLGRVWKRSYLLYGPSGTGKSSFVAAMANFLDYDVYDIDLSKVVDD 270
Query: 281 XXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSC- 339
+ T +S++VIED+D + ++ + V LSG+LNF D + SSC
Sbjct: 271 SDLKMLLLQTRGKSVIVIEDLDRHLSTKS-----------TAVNLSGILNFTDSILSSCT 319
Query: 340 GDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIE 399
DERI+VFT KE++DPA+LRPGR+D+HIH FK LA NYL +K H +F ++E
Sbjct: 320 ADERIMVFTMTGKEQIDPAMLRPGRVDVHIHFPLCDFTAFKTLANNYLGVKEHKLFSQVE 379
Query: 400 ELIKE-VEVTPAE 411
+ + ++PAE
Sbjct: 380 GIFQNGASLSPAE 392
>TAIR|locus:2086591 [details] [associations]
symbol:AT3G29800 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:CP002686
EMBL:AP000736 HOGENOM:HOG000237995 IPI:IPI00525495
RefSeq:NP_189629.1 UniGene:At.53586 ProteinModelPortal:Q9LJ50
SMR:Q9LJ50 IntAct:Q9LJ50 PRIDE:Q9LJ50 EnsemblPlants:AT3G29800.1
GeneID:822695 KEGG:ath:AT3G29800 TAIR:At3g29800 InParanoid:Q9LJ50
PhylomeDB:Q9LJ50 ArrayExpress:Q9LJ50 Genevestigator:Q9LJ50
Uniprot:Q9LJ50
Length = 440
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 115/349 (32%), Positives = 182/349 (52%)
Query: 96 SQAPREKSLSVTINEGQKVVDTFEGMQLTWELVTTENQKTSLDYDSGLYASETAHKSFHL 155
+QA +++ E ++ D ++G +L W + +N ++ + F L
Sbjct: 61 TQAYLFDKINLDFVEEREFDDIYQGAKLKWRIFVDKNNIGNIP-----------KQCFEL 109
Query: 156 SFSKLFKDKVLNKYLPYVAERSKAIKETKKVIKL--YSLCAA--DAINLDHPSTFDTLAM 211
F + +D V + Y+P+V ++K IK K+++++ YS C + LDH S+F+T+ M
Sbjct: 110 RFDEKHRDLVFDSYIPFVESKAKEIKSKKRILEMHTYSHCCDTWETKILDHHSSFETIVM 169
Query: 212 DPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYD 271
LK+ LIDD+D F+ + +FY RVG+ W R YLL+G PG GK+SL+AA+A YL FD+Y+
Sbjct: 170 KEDLKRRLIDDIDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIAKYLNFDVYN 229
Query: 272 MEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNF 331
+ + SIL++EDID S+E S+V LS LL+
Sbjct: 230 ITQGVKTDFDTRRLIR-RVEDSSILLVEDIDTSLE-------------GSKVALSQLLSS 275
Query: 332 VDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI-HMSY--LTPGGFKILAFNYLK 388
+ WS+ G R+++FTTN KER D LL M +++ H + L ++
Sbjct: 276 LTWPWSN-GKARVVIFTTNNKERFDQTLLCRMEMKIYMGHCCFEDFKTLASNYLGISHDN 334
Query: 389 IKSHSMFDEIEELIKEVEVTPA---EEFMKSEDADVALNGLVDFLLRKK 434
H ++ +I+ LI VTP EE MKS+D DVAL LV + K+
Sbjct: 335 DAPHRLYPDIKRLIDGQAVTPGQVVEELMKSQDVDVALQSLVRYSSSKE 383
>DICTYBASE|DDB_G0286765 [details] [associations]
symbol:DDB_G0286765 "BCS1-like protein" species:44689
"Dictyostelium discoideum" [GO:0034551 "mitochondrial respiratory
chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0286765 GO:GO:0005524 EMBL:AAFI02000089
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 RefSeq:XP_637666.1
ProteinModelPortal:Q54L95 EnsemblProtists:DDB0229898 GeneID:8625806
KEGG:ddi:DDB_G0286765 InParanoid:Q54L95 OMA:SISIMNM Uniprot:Q54L95
Length = 574
Score = 328 (120.5 bits), Expect = 5.0e-29, P = 5.0e-29
Identities = 79/252 (31%), Positives = 131/252 (51%)
Query: 165 VLNKYLPYVAERSKAIKETKKVIKLYSLCAA----DAINLDHPSTFDTLAMDPVLKQALI 220
++N L E S + + K K+YSL + + I + D++ +D + + ++
Sbjct: 204 IINSILETAVEYSVTLNKDKT--KIYSLDQSSTFWECIACQNKRLVDSVFLDENISEKVV 261
Query: 221 DDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXX 280
+DL F+ +++Y+ G ++RGYLLYGPPG+GK+S I +MA I M
Sbjct: 262 NDLTNFIHGKKWYTDTGVPYRRGYLLYGPPGSGKTSFILSMAGNFGKSISIMNMSKGIHD 321
Query: 281 XXXXXXXVSTGNRSILVIEDIDCS-IELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSC 339
+ILV+EDID ++ +N G N +T SGLLN +DGL SS
Sbjct: 322 GNIHSIIQKCNKDTILVLEDIDAVFVKRKNNSAAG-----NDVLTFSGLLNAIDGLASS- 375
Query: 340 GDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIE 399
D RI++ TTN+ ERL PAL+RPGR+D+ + Y + +++ + K H + D I
Sbjct: 376 -DGRILMMTTNHLERLSPALIRPGRIDLKVKFDYASNHQIELMFKRFFDQKYHYLIDSIN 434
Query: 400 ELIKEVEVTPAE 411
++ +++ A+
Sbjct: 435 SKLENHQISTAQ 446
>POMBASE|SPAC644.07 [details] [associations]
symbol:SPAC644.07 "mitochondrial Rieske ISP assembly
ATPase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC644.07 GO:GO:0016021 GO:GO:0005524 EMBL:CU329670
GO:GO:0005743 GO:GO:0016226 eggNOG:COG0465 GO:GO:0043623
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
KO:K08900 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:D89136 PIR:T42406
RefSeq:NP_593875.1 ProteinModelPortal:Q9P6Q3 STRING:Q9P6Q3
EnsemblFungi:SPAC644.07.1 GeneID:2543663 KEGG:spo:SPAC644.07
OrthoDB:EOG4XWK6J NextBio:20804669 GO:GO:0042623 Uniprot:Q9P6Q3
Length = 449
Score = 312 (114.9 bits), Expect = 3.0e-27, P = 3.0e-27
Identities = 76/254 (29%), Positives = 138/254 (54%)
Query: 155 LSFSKLFKDKVLNKYLPYVAERSKAIKETKKVIKLYSLCAADAINLDHPST---FDTLAM 211
++ + L +D+ + L A++ + K +Y+ A + HP + ++ +
Sbjct: 154 ITLTTLSRDRGIFSELLLEAQKFMQSAQKNKTT-IYTAWATEWKPFGHPRSKRMLSSVVL 212
Query: 212 DPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYD 271
+ +K+ + DD+ F++ ++Y G ++RGYLLYGPPG+GK+S + A+A L +DI
Sbjct: 213 ESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICV 272
Query: 272 MEXXXXXXXXXXXXXXVST-GNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLN 330
+ +S ++++++ED+D + + R G+ N VT SGLLN
Sbjct: 273 LNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVDSAFQGRERSGEVGFHAN---VTFSGLLN 329
Query: 331 FVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIK 390
+DG+ SS DERII TTN+ E+LDPAL+RPGR+D+ ++ TP + + + +
Sbjct: 330 ALDGVTSS--DERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREM---FTRFY 384
Query: 391 SHS--MFDEIEELI 402
HS M D++ +++
Sbjct: 385 GHSPEMADDLSDIV 398
>WB|WBGene00010042 [details] [associations]
symbol:bcs-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 eggNOG:COG0465 GO:GO:0017111 EMBL:Z49967
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
PIR:T22632 RefSeq:NP_001022191.1 ProteinModelPortal:Q20755
SMR:Q20755 STRING:Q20755 PaxDb:Q20755 PRIDE:Q20755
EnsemblMetazoa:F54C9.6a.1 EnsemblMetazoa:F54C9.6a.2
EnsemblMetazoa:F54C9.6a.3 GeneID:174372 KEGG:cel:CELE_F54C9.6
UCSC:F54C9.6a.2 CTD:174372 WormBase:F54C9.6a InParanoid:Q20755
NextBio:883750 ArrayExpress:Q20755 Uniprot:Q20755
Length = 442
Score = 311 (114.5 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 82/273 (30%), Positives = 139/273 (50%)
Query: 168 KYLPYVAERS--KAIKETKKVIKLYSLCAADAINLDHPST---FDTLAMDPVLKQALIDD 222
K+ + E+S +AI + + +Y I P +++ +D + + L++D
Sbjct: 165 KFFKRMLEQSAKEAIDNAETGLVIYQAVGPQWIRFGVPRKKRDIESVILDGRICEELVED 224
Query: 223 LDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXX 282
F+ +Y+ G ++RGYL YGPPGTGKSS I+A+A++ + + +
Sbjct: 225 FQEFISSATWYADRGVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSERTLDDD 284
Query: 283 XXXXXVSTGN-RSILVIEDIDCS-IELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCG 340
++T S++++EDID + + E+ + S+VT SGLLN +DG+ +C
Sbjct: 285 RLNHLLNTAPPNSVVILEDIDAAFVSREDPMSNHPAYQGLSRVTFSGLLNALDGV--ACA 342
Query: 341 DERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMF-DEIE 399
+ER+ TTNY ERLDPAL+RPGR+D + T G + + + S S+ DE
Sbjct: 343 EERLTFMTTNYVERLDPALIRPGRVDRKQYFGNATDGMLSKMFSRFYRQPSDSVLADEFV 402
Query: 400 ELIKE--VEVTPAE---EF-MKSEDADVALNGL 426
+ + E E++PA F M +D AL+ +
Sbjct: 403 KRVSEHKTELSPAMIQGHFLMYKQDPRAALDNI 435
>SGD|S000002783 [details] [associations]
symbol:BCS1 "Protein translocase and chaperone required for
Complex III assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008320 "protein
transmembrane transporter activity" evidence=IMP] [GO:0032979
"protein insertion into mitochondrial membrane from inner side"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051131 "chaperone-mediated protein complex assembly"
evidence=IMP;IPI] Reactome:REACT_85873 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000002783
GO:GO:0016021 GO:GO:0005829 GO:GO:0005524 GO:GO:0005743
GO:GO:0005758 EMBL:BK006938 GO:GO:0016887 Reactome:REACT_118590
EMBL:U28373 eggNOG:COG0465 GO:GO:0051131 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
GO:GO:0034551 OrthoDB:EOG4XWK6J EMBL:S47190 PIR:S61170
RefSeq:NP_010663.1 ProteinModelPortal:P32839 SMR:P32839
IntAct:P32839 STRING:P32839 PaxDb:P32839 EnsemblFungi:YDR375C
GeneID:851981 KEGG:sce:YDR375C CYGD:YDR375c NextBio:970127
Genevestigator:P32839 GermOnline:YDR375C GO:GO:0008320
GO:GO:0032979 Uniprot:P32839
Length = 456
Score = 298 (110.0 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 78/258 (30%), Positives = 138/258 (53%)
Query: 155 LSFSKLFKDKVLNKYLPYVAERSKAIKETKKVIKLYSLCAADAINLDHPST---FDTLAM 211
++ + L++DK L + A + A+K T+ +Y+ + P ++ +
Sbjct: 172 VTLTTLYRDKHLFDDILNEA-KDIALKTTEGKTVIYTSFGPEWRKFGQPKAKRMLPSVIL 230
Query: 212 DPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYD 271
D +K+ ++DD+ F+K ++YS G ++RGYLLYGPPG+GK+S I A+A L ++I
Sbjct: 231 DSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICI 290
Query: 272 MEXXXXXXXXXXXXXXVST-GNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLN 330
+ ++ RSIL++EDID + N++ G +S VT SGLLN
Sbjct: 291 LNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAF---NKRSQTGEQGFHSSVTFSGLLN 347
Query: 331 FVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIK 390
+DG+ SS +E I TTN+ E+LD A++RPGR+D + + TP + + + +
Sbjct: 348 ALDGVTSS--EETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATPYQVEKMFMKFYPGE 405
Query: 391 SHSMFDEIEELIKEVEVT 408
+ + + +KE+++T
Sbjct: 406 T-DICKKFVNSVKELDIT 422
>ASPGD|ASPL0000041452 [details] [associations]
symbol:AN3131 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001306 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EnsemblFungi:CADANIAT00009943 Uniprot:C8VII7
Length = 497
Score = 299 (110.3 bits), Expect = 9.6e-25, P = 9.6e-25
Identities = 66/173 (38%), Positives = 102/173 (58%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
T D++ +D +K+ +++D+ F+ +Y G ++RGYLLYGPPGTGKSS I A+A
Sbjct: 248 TLDSVILDKGVKERIVEDVKDFLATESWYHDRGIPYRRGYLLYGPPGTGKSSFIQAVAGE 307
Query: 265 LKFDIYDMEXXXXXXXXXXXXXXVS-TGNRSILVIEDIDCSIELENRQCG-GGYDENNSQ 322
L +DI + ++ R+++++ED+D + Q GY +
Sbjct: 308 LDYDIAILNLSERGMTDDRLNRLLTIVPKRTLVLLEDVDAAFSNRRTQTDEDGY--RGAN 365
Query: 323 VTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLT 375
VT SGLLN +DG+ S+ +ERI+ TTN+ ERLD AL+RPGR+DM + + LT
Sbjct: 366 VTFSGLLNALDGVASA--EERIVFLTTNHVERLDEALVRPGRVDMTVRIGELT 416
>FB|FBgn0032195 [details] [associations]
symbol:CG4908 species:7227 "Drosophila melanogaster"
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW GeneTree:ENSGT00390000005415
EMBL:AY089691 RefSeq:NP_609358.1 RefSeq:NP_723532.1 UniGene:Dm.383
SMR:Q9VL22 STRING:Q9VL22 EnsemblMetazoa:FBtr0079949
EnsemblMetazoa:FBtr0079950 GeneID:34360 KEGG:dme:Dmel_CG4908
UCSC:CG4908-RA FlyBase:FBgn0032195 InParanoid:Q9VL22
OrthoDB:EOG40CFZ9 GenomeRNAi:34360 NextBio:788111 Uniprot:Q9VL22
Length = 431
Score = 294 (108.6 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 74/214 (34%), Positives = 117/214 (54%)
Query: 169 YLPYVAE-RSKAIKETKKVIKLYSLCAADAINLDHPST---FDTLAMDPVLKQALIDDLD 224
Y + E R A++ T+ LY+ A+ HP ++ +D Q +I D
Sbjct: 148 YFDILEEARQLALEATEGKTVLYTAMGAEWRPFGHPRRRRPTGSVVLDRGTSQRIIADCQ 207
Query: 225 RFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXX 284
F+K +Y++ G ++RGYLLYGPPG GKSS I A+A L++ + +
Sbjct: 208 DFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSVCLLNLSERGLTDDRL 267
Query: 285 XXXVSTG-NRSILVIEDIDCS-IELE-NRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGD 341
++ +SI+++EDID + + E Q +D N ++T SGLLN +DG+ S+ +
Sbjct: 268 NHLLNVAPEQSIILLEDIDAAFVSREATPQQKSAFDGLN-RITFSGLLNCLDGVGST--E 324
Query: 342 ERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLT 375
RI+ TTNY +RLDPAL+RPGR+D+ ++ Y T
Sbjct: 325 ARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCT 358
>UNIPROTKB|G4MYI1 [details] [associations]
symbol:MGG_10383 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003713408.1 ProteinModelPortal:G4MYI1
EnsemblFungi:MGG_10383T0 GeneID:2681994 KEGG:mgr:MGG_10383
Uniprot:G4MYI1
Length = 494
Score = 297 (109.6 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 104/381 (27%), Positives = 186/381 (48%)
Query: 66 SEGFSVNEIYQAAELYLSTRITPS-IQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQLT 124
+ GF ++++ + +L ++T S L S S + G+ ++ +G T
Sbjct: 105 AHGFLMSKLTRIRDLSVATATESSRTDPLGASDDATRASFFLQPGYGRHIIRHSDG---T 161
Query: 125 WELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAIKETK 184
+ V E Q T+ ++ +G H++ ++ + L+ + + +V + A+ ++
Sbjct: 162 YIAVHREKQSTA-NHQTG-----EPHET--VTLTTLWSHRHV---FEHVFSEAHALAKSA 210
Query: 185 KVIK--LYSLCAADAINLDHPSTFDTLA---MDPVLKQALIDDLDRFVKRREFYSRVGKA 239
+ K +Y++ L P LA + LK+A+++D+ F+ R ++Y+ G
Sbjct: 211 QAGKTPVYNIQGMSWAQLGLPRRKRPLASVVFEKGLKEAIVEDVQDFLSRHQWYADRGIP 270
Query: 240 WKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVST-GNRSILVI 298
++R YLL+GPPG+GKSS I A+A L +++ + + RSIL++
Sbjct: 271 YRRTYLLHGPPGSGKSSFIHALAGELDYNLAIVNLVERGLTDDKLANMLMRLPPRSILLL 330
Query: 299 EDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPA 358
ED+D + GY + + VT SGLLN +DG+ + G++RI TTNY ERLDPA
Sbjct: 331 EDVDVAFGNRQEMSPDGY--SGATVTYSGLLNVLDGM--AAGEDRIAFLTTNYVERLDPA 386
Query: 359 LLRPGRMDMHIHMSYLTPG-GFKILAFNYLKIKSHSMFDE--IEELIK-EVEVTPAEEFM 414
L+RPGR+D+ + + TP ++ + Y + + E I +L K PAE M
Sbjct: 387 LIRPGRVDVKVRVGEATPEQAAELWSRFYGDVDTSGSGRERFIAKLYKLGFFAEPAEGRM 446
Query: 415 KSEDADVALNGLVDFLLRKKE 435
+ A+ GL FL K++
Sbjct: 447 TLRVSAAAIQGL--FLTNKED 465
>CGD|CAL0005742 [details] [associations]
symbol:orf19.458 species:5476 "Candida albicans" [GO:0008320
"protein transmembrane transporter activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0032979 "protein insertion into mitochondrial membrane from
inner side" evidence=IEA] [GO:0051131 "chaperone-mediated protein
complex assembly" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 CGD:CAL0005742 GO:GO:0005524
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
HOGENOM:HOG000198799 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715892.1 RefSeq:XP_715943.1 ProteinModelPortal:Q5A283
STRING:Q5A283 GeneID:3642454 GeneID:3642502 KEGG:cal:CaO19.458
KEGG:cal:CaO19.8089 Uniprot:Q5A283
Length = 444
Score = 283 (104.7 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 77/241 (31%), Positives = 127/241 (52%)
Query: 141 SGLYASETAHKSFH-LSFSKLFKD-KVLNKYLPYVAERSKAIKETKKVIKLYSLCAADAI 198
SG T+ F ++ + L++D K+ N L + +E K VI ++ +
Sbjct: 144 SGKLLDMTSGTPFETVTLTTLYRDRKLFNDLLSEAKSLALKAREGKTVI--FTSWGPEWR 201
Query: 199 NLDHPST---FDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKS 255
P + ++ +D + + +++D+ F+ E+Y + G ++RGYLLYGPPG+GK+
Sbjct: 202 PFGQPRSKRLLGSVILDEGIAENIVNDVKDFLTSGEWYHKRGIPYRRGYLLYGPPGSGKT 261
Query: 256 SLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVS-TGNRSILVIEDIDCSIELENRQCGG 314
S I A+A L ++I + ++ NRSIL++ED+D + +
Sbjct: 262 SFIQALAGELDYNICILNLSENNLTDDRLNHLMNHIPNRSILLLEDVDAAFNKREQTNDQ 321
Query: 315 GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYL 374
G+ NN VT SGLLN +DG+ S+ +E I TTN+ E+LDPALLRPGR+D + +
Sbjct: 322 GF--NNG-VTFSGLLNALDGVASA--EECITFMTTNHPEKLDPALLRPGRVDYKVMIDNA 376
Query: 375 T 375
T
Sbjct: 377 T 377
>ZFIN|ZDB-GENE-040426-938 [details] [associations]
symbol:bcs1l "BCS1-like (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-040426-938
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465
GO:GO:0017111 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 EMBL:AY394959 EMBL:BC045990
IPI:IPI00495335 RefSeq:NP_957476.2 UniGene:Dr.80335
ProteinModelPortal:Q7ZV60 STRING:Q7ZV60 PRIDE:Q7ZV60
Ensembl:ENSDART00000022246 GeneID:394157 KEGG:dre:394157
InParanoid:Q7ZV60 NextBio:20815107 ArrayExpress:Q7ZV60 Bgee:Q7ZV60
Uniprot:Q7ZV60
Length = 420
Score = 278 (102.9 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 78/257 (30%), Positives = 134/257 (52%)
Query: 125 WELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAE-RSKAIKET 183
W V +K +D +G T +S ++F+ L +D+ + + E R A+K+
Sbjct: 112 WIRVERVREKQMMDLHTG-----TPWES--VTFTALGRDR--QTFFNILQEARELALKQE 162
Query: 184 KKVIKLYSLCAADAINLDHPST---FDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAW 240
+ +Y+ A+ P ++ ++ + + ++DD+ F+ ++Y+ G +
Sbjct: 163 EGRTVMYTAMGAEWRPFGFPRRRRPLSSVVLESGVAERIVDDVKEFIGNPKWYTDRGIPY 222
Query: 241 KRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTG-NRSILVIE 299
+RGYLLYGPPG GKSS I A+A L + I M +S +SI+++E
Sbjct: 223 RRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRSLSDDRLNHLLSVAPQQSIILLE 282
Query: 300 DIDCSI---ELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLD 356
D+D + EL + Y + ++T SGLLN +DG+ SS + RI+ TTN+ ERLD
Sbjct: 283 DVDAAFVSRELLPTENPLAY-QGMGRLTFSGLLNALDGVASS--EARIVFMTTNFIERLD 339
Query: 357 PALLRPGRMDMHIHMSY 373
PAL+RPGR+D+ ++ +
Sbjct: 340 PALVRPGRVDLKQYVGH 356
>DICTYBASE|DDB_G0291910 [details] [associations]
symbol:bcs1lB "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0291910
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005743 GO:GO:0016887 EMBL:AAFI02000186 eggNOG:COG0465
GO:GO:0051131 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 RefSeq:XP_629907.1 STRING:Q54DY9
EnsemblProtists:DDB0266726 GeneID:8628408 KEGG:ddi:DDB_G0291910
KO:K08900 OMA:RDKSYQW Uniprot:Q54DY9
Length = 458
Score = 193 (73.0 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 47/155 (30%), Positives = 76/155 (49%)
Query: 181 KETKKVIKLYSLCAADAINLDHPST---FDTLAMDPVLKQALIDDLDRFVKRREFYSRVG 237
KE K + +Y+ D HP ++ +D + +I D+ +F+ ++Y+ G
Sbjct: 179 KEEGKTL-IYTSMGTDWRRFGHPRRKRPISSVILDKGKSELIIQDVKKFLNNSDWYNDRG 237
Query: 238 KAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTG-NRSIL 296
++RGYLLYGPPGTGKSS I A+A L+ I + ++T RSI+
Sbjct: 238 IPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSDTSLNQLLATAPQRSII 297
Query: 297 VIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNF 331
++EDID +I+ N + N+ SG L +
Sbjct: 298 LLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQY 332
Score = 129 (50.5 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 41/120 (34%), Positives = 70/120 (58%)
Query: 321 SQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFK 380
S +T SGLLN +DG+ +S G RI+ TTN+ E+LD L+RPGR+D+ I + + +
Sbjct: 346 SALTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCSSYQME 403
Query: 381 ILAFNYLKIKSHSMFDEIEELIKEVE---VTPAE---EFMK-SEDADVALNGLVDFLLRK 433
+ +LK FD ++ ++++E +PA+ FM S ++ A+N L + L++K
Sbjct: 404 QM---FLKFYPTD-FDLAKQFVEKLENYKFSPAQLQAYFMTYSNNSIEAINNLNE-LIKK 458
>ASPGD|ASPL0000063397 [details] [associations]
symbol:AN7549 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_680818.1 ProteinModelPortal:Q5AVY1
EnsemblFungi:CADANIAT00000655 GeneID:2869406 KEGG:ani:AN7549.2
HOGENOM:HOG000165936 OMA:RPLAFIR OrthoDB:EOG4BK8C9 Uniprot:Q5AVY1
Length = 650
Score = 177 (67.4 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 64/228 (28%), Positives = 102/228 (44%)
Query: 102 KSLSVTINEGQKVVDTFEGMQLTWELVTTENQKTSLD--YDSGLYASETAHKSFHLSFSK 159
K L T +EG F G L + + ++ K+S Y G A E + S
Sbjct: 170 KKLRFTPSEGTHYF-WFNGRPLAF-IREKQDDKSSGGGYYGYGTKAPERLYISCIGRDPA 227
Query: 160 LFKDKVLNKYLPYVAE--RSKAIKETKKVIKL--YSLCAADAINLDHPSTFDTLAMDPVL 215
+ K+ +L YVA+ + I K +S C A A P T+ +D
Sbjct: 228 VLKELLLEAQRYYVAKDKNNTVIYRGHKSGSYTEWSRCMARA-----PRALSTVVLDKAQ 282
Query: 216 KQALIDDLDRFV--KRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDME 273
K A IDD+ ++ + R +Y+ G ++RGYLL+GPPGTGK+SL A A L ++Y +
Sbjct: 283 KDAFIDDIKDYLHPRTRRWYNNRGIPYRRGYLLHGPPGTGKTSLCFAAAGLLGLELYLLN 342
Query: 274 XXXXXXXXXXXXXXVST-GNRSILVIEDIDCSIELENRQCGGGYDENN 320
+ R I+++ED+DC+ + R G +++N
Sbjct: 343 LSSKSLDEDELMALFTDLPTRCIVLLEDVDCAGMSQKRTPGSSSNDDN 390
Score = 150 (57.9 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 313 GGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
G G E V+LSGLLN +DG+ ++C + RI+V TTN+ E+LDPAL+RPGR+D+ I
Sbjct: 413 GTGVFEKQG-VSLSGLLNVIDGV-AAC-EGRILVMTTNHPEKLDPALVRPGRIDLSIAFG 469
Query: 373 YLTPGGFKIL 382
+ T K L
Sbjct: 470 HSTTSDIKEL 479
Score = 53 (23.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 195 ADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGK 254
A A + + +TF+T M +L + L+ F+ SR+ + + L P
Sbjct: 2 ASAPTMANATTFNTTPMQTLLNPSDTALLETFIPGYSMASRILSTYLQIDLSSYIPYLIF 61
Query: 255 SSLIAAMANYLKFDIYDM 272
LIAA A Y+ +Y++
Sbjct: 62 MGLIAATARYIYSQLYNL 79
>MGI|MGI:1914071 [details] [associations]
symbol:Bcs1l "BCS1-like (yeast)" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISO]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=ISO] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1914071 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617
EMBL:AK012324 EMBL:AK078925 EMBL:AK079385 EMBL:BC019781
IPI:IPI00112986 RefSeq:NP_080060.1 UniGene:Mm.358700
ProteinModelPortal:Q9CZP5 SMR:Q9CZP5 STRING:Q9CZP5
PhosphoSite:Q9CZP5 PaxDb:Q9CZP5 PRIDE:Q9CZP5 DNASU:66821
Ensembl:ENSMUST00000027358 Ensembl:ENSMUST00000113732
Ensembl:ENSMUST00000113733 GeneID:66821 KEGG:mmu:66821
UCSC:uc007bmq.1 InParanoid:Q9CZP5 NextBio:322735 Bgee:Q9CZP5
CleanEx:MM_BCS1L Genevestigator:Q9CZP5
GermOnline:ENSMUSG00000026172 Uniprot:Q9CZP5
Length = 418
Score = 267 (99.0 bits), Expect = 4.2e-21, P = 4.2e-21
Identities = 67/243 (27%), Positives = 126/243 (51%)
Query: 176 RSKAIKETKKVIKLYSLCAADAINLDHPST---FDTLAMDPVLKQALIDDLDRFVKRREF 232
R+ A+++ + +Y+ ++ +P D++ + L ++ D+ F+ ++
Sbjct: 155 RALALQQEEGKTVMYTAVGSEWRTFGYPRRRRPLDSVVLQQGLADRIVKDIREFIDNPKW 214
Query: 233 YSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTG- 291
Y G ++RGYLLYGPPG GKSS I A+A L+ I + +S
Sbjct: 215 YIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAP 274
Query: 292 NRSILVIEDIDCSIELENRQCGGGYD-ENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTN 350
+S++++ED+D + + + ++T SGLLN +DG+ S+ + RI+ TTN
Sbjct: 275 QQSLVLLEDVDAAFLSRDLAVENPIKYQGLGRLTFSGLLNALDGVAST--EARIVFMTTN 332
Query: 351 YKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEI-EELIKEV-EVT 408
Y +RLDPAL+RPGR+D+ ++ Y + + + ++ S+ + E ++K E++
Sbjct: 333 YIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLKATSEIS 392
Query: 409 PAE 411
PA+
Sbjct: 393 PAQ 395
>UNIPROTKB|F1P1Q6 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
GeneTree:ENSGT00390000005415 EMBL:AADN02016784 IPI:IPI00819859
PRIDE:F1P1Q6 Ensembl:ENSGALT00000038219 Uniprot:F1P1Q6
Length = 419
Score = 267 (99.0 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 71/262 (27%), Positives = 134/262 (51%)
Query: 122 QLTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAE-RSKAI 180
Q W + ++ +D ++G TA +S ++F+ L ++ + + + E R A+
Sbjct: 109 QKKWIRIERNRERQMIDLNTG-----TAWES--VTFTALGTNREI--FFNILQEARELAL 159
Query: 181 KETKKVIKLYSLCAADAINLDHPST---FDTLAMDPVLKQALIDDLDRFVKRREFYSRVG 237
++ + +Y+ + P ++ ++ + + L++D+ F+ ++Y G
Sbjct: 160 QQQEGRTIMYTAMGTEWRQFGFPRRRRPLSSVVLEKGVSERLVEDVKEFIDNPKWYIERG 219
Query: 238 KAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTG-NRSIL 296
++RGYLLYGPPG GKSS I A+A L+ I + +S +SI+
Sbjct: 220 IPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSDDRLNYLLSVAPQQSII 279
Query: 297 VIEDIDCSIELENRQCGG-GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
++ED+D + + + ++T SGLLN +DG+ S+ + RI+ TTNY +RL
Sbjct: 280 LLEDVDAAFVSRDLAAENPAMYQGMGRLTFSGLLNALDGVAST--EARIVFMTTNYVDRL 337
Query: 356 DPALLRPGRMDMHIHMSYLTPG 377
DPAL+RPGR+D+ ++ + + G
Sbjct: 338 DPALVRPGRVDLKQYVGHCSRG 359
>DICTYBASE|DDB_G0289135 [details] [associations]
symbol:bcs1lA "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0289135 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0005743 GenomeReviews:CM000154_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0051131 EMBL:AAFI02000130 RefSeq:XP_636375.1
EnsemblProtists:DDB0266725 GeneID:8626976 KEGG:ddi:DDB_G0289135
OMA:FITNESW InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 Uniprot:Q54HY8
Length = 421
Score = 267 (99.0 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 66/164 (40%), Positives = 90/164 (54%)
Query: 215 LKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEX 274
LK LI+D+ F+ +Y G ++RGYLLYG PG GKSSLI A+A L DI +
Sbjct: 195 LKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSL 254
Query: 275 XXXXXXXXXXXXXVSTGN-RSILVIEDIDCSIEL--ENRQCGGGYDENNSQVTLSGLLNF 331
++ +SIL+IEDID + + +N NN+ +T SGLLN
Sbjct: 255 SSKDIDDKQINHLLNNAPPKSILLIEDIDAAFKSHRDNVDSNNNNSNNNNSLTYSGLLNA 314
Query: 332 VDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLT 375
+DG+ S G RI+ TTN E LD AL+R GR+D+ I +S T
Sbjct: 315 LDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKVSNAT 356
>UNIPROTKB|E1BWG5 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 EMBL:AADN02016784 IPI:IPI00579056
Ensembl:ENSGALT00000018571 Uniprot:E1BWG5
Length = 420
Score = 266 (98.7 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 73/263 (27%), Positives = 135/263 (51%)
Query: 122 QLTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAE-RSKAI 180
Q W + ++ +D ++G TA +S ++F+ L ++ + + + E R A+
Sbjct: 109 QKKWIRIERNRERQMIDLNTG-----TAWES--VTFTALGTNREI--FFNILQEARELAL 159
Query: 181 KETKKVIKLYSLCAADAINLDHPST---FDTLAMDPVLKQALIDDLDRFVKRREFYSRVG 237
++ + +Y+ + P ++ ++ + + L++D+ F+ ++Y G
Sbjct: 160 QQQEGRTIMYTAMGTEWRQFGFPRRRRPLSSVVLEKGVSERLVEDVKEFIDNPKWYIERG 219
Query: 238 KA-WKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTG-NRSI 295
KA +RGYLLYGPPG GKSS I A+A L+ I + +S +SI
Sbjct: 220 KAPVRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSDDRLNYLLSVAPQQSI 279
Query: 296 LVIEDIDCSIELENRQCGG-GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKER 354
+++ED+D + + + ++T SGLLN +DG+ S+ + RI+ TTNY +R
Sbjct: 280 ILLEDVDAAFVSRDLAAENPAMYQGMGRLTFSGLLNALDGVAST--EARIVFMTTNYVDR 337
Query: 355 LDPALLRPGRMDMHIHMSYLTPG 377
LDPAL+RPGR+D+ ++ + + G
Sbjct: 338 LDPALVRPGRVDLKQYVGHCSRG 360
>RGD|1359658 [details] [associations]
symbol:Bcs1l "BC1 (ubiquinol-cytochrome c reductase)
synthesis-like" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007005
"mitochondrion organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly"
evidence=IEA;ISO] [GO:0033617 "mitochondrial respiratory chain
complex IV assembly" evidence=IEA;ISO] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1359658 GO:GO:0005739 GO:GO:0005524 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0
GO:GO:0034551 GO:GO:0033617 EMBL:CH474004 EMBL:BC083660
IPI:IPI00213929 RefSeq:NP_001007667.1 UniGene:Rn.15293
IntAct:Q5XIM0 STRING:Q5XIM0 Ensembl:ENSRNOT00000022632
GeneID:301514 KEGG:rno:301514 UCSC:RGD:1359658 InParanoid:Q5XIM0
NextBio:648873 Genevestigator:Q5XIM0 Uniprot:Q5XIM0
Length = 418
Score = 259 (96.2 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 65/243 (26%), Positives = 126/243 (51%)
Query: 176 RSKAIKETKKVIKLYSLCAADAINLDHPST---FDTLAMDPVLKQALIDDLDRFVKRREF 232
R+ A+++ + +Y+ ++ +P D++ + L ++ D+ F+ ++
Sbjct: 155 RALALQQEEGKTVMYTAVGSEWRTFGYPRRRRPLDSVVLQQGLADRIVKDIREFIDNPKW 214
Query: 233 YSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTG- 291
Y G ++RGYLLYGPPG GKSS I A+A L+ I + +S
Sbjct: 215 YIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAP 274
Query: 292 NRSILVIEDIDCSIELENRQCGGGYD-ENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTN 350
+S++++ED+D + + + ++T SGLLN +DG+ S+ + RI+ TTN
Sbjct: 275 QQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVAST--EARIVFMTTN 332
Query: 351 YKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEI-EELIKEV-EVT 408
+ +RLDPAL+RPGR+D+ ++ Y + + + ++ S+ + E ++K +++
Sbjct: 333 HIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLKATSQIS 392
Query: 409 PAE 411
PA+
Sbjct: 393 PAQ 395
>UNIPROTKB|E2RE50 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IEA] [GO:0033617 "mitochondrial
respiratory chain complex IV assembly" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 GO:GO:0034551 GO:GO:0033617
EMBL:AAEX03018156 RefSeq:XP_536070.1 Ensembl:ENSCAFT00000023625
GeneID:478911 KEGG:cfa:478911 NextBio:20854180 Uniprot:E2RE50
Length = 419
Score = 257 (95.5 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 73/226 (32%), Positives = 116/226 (51%)
Query: 155 LSFSKLFKD-KVLNKYLPYVAERSKAIKETKKVIKLYSLCAADAINLDHPSTFDTLAMDP 213
++F+ L D KV L E + +E K V +Y+ ++ +P L
Sbjct: 135 VTFTALGTDRKVFFNILEEARELALQQEEGKTV--MYTAMGSEWRPFGYPRRRRPLT-SV 191
Query: 214 VLKQALID----DLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDI 269
VL Q L D D+ F+ ++Y+ G ++RGYLLYGPPG GKSS I A+A L+ I
Sbjct: 192 VLGQGLADRIVRDVREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSI 251
Query: 270 YDMEXXXXXXXXXXXXXXVSTG-NRSILVIEDIDCSIELENRQCGGGYD-ENNSQVTLSG 327
+ +S +S++++ED+D + + + ++T SG
Sbjct: 252 CLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAENPVKYQGLGRLTFSG 311
Query: 328 LLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSY 373
LLN +DG+ S+ + RI+ TTN+ +RLDPAL+RPGR+DM ++ Y
Sbjct: 312 LLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDMKEYVGY 355
>UNIPROTKB|Q9Y276 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IMP] [GO:0005750 "mitochondrial
respiratory chain complex III" evidence=TAS] Reactome:REACT_17015
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 EMBL:CH471063 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 HOGENOM:HOG000198799 HOVERGEN:HBG048759
OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617 EMBL:AF026849
EMBL:AF346835 EMBL:AF516670 EMBL:AF038195 EMBL:AK096210
EMBL:BX571752 EMBL:BC000416 EMBL:BC007500 IPI:IPI00003985
RefSeq:NP_001073335.1 RefSeq:NP_001244271.1 RefSeq:NP_001244272.1
RefSeq:NP_001244273.1 RefSeq:NP_004319.1 UniGene:Hs.471401
ProteinModelPortal:Q9Y276 SMR:Q9Y276 IntAct:Q9Y276
MINT:MINT-1433080 STRING:Q9Y276 PhosphoSite:Q9Y276 DMDM:46397351
PaxDb:Q9Y276 PeptideAtlas:Q9Y276 PRIDE:Q9Y276 DNASU:617
Ensembl:ENST00000359273 Ensembl:ENST00000392109
Ensembl:ENST00000392110 Ensembl:ENST00000392111
Ensembl:ENST00000412366 Ensembl:ENST00000431802
Ensembl:ENST00000439945 GeneID:617 KEGG:hsa:617 UCSC:uc002vip.3
GeneCards:GC02P219523 HGNC:HGNC:1020 HPA:HPA037700 HPA:HPA037701
MIM:124000 MIM:262000 MIM:603358 MIM:603647 neXtProt:NX_Q9Y276
Orphanet:123 Orphanet:53693 Orphanet:1460 Orphanet:255249
Orphanet:254902 PharmGKB:PA25327 InParanoid:Q9Y276 PhylomeDB:Q9Y276
GenomeRNAi:617 NextBio:2497 ArrayExpress:Q9Y276 Bgee:Q9Y276
CleanEx:HS_BCS1L Genevestigator:Q9Y276 GermOnline:ENSG00000074582
GO:GO:0005750 Uniprot:Q9Y276
Length = 419
Score = 256 (95.2 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 72/226 (31%), Positives = 117/226 (51%)
Query: 155 LSFSKLFKD-KVLNKYLPYVAERSKAIKETKKVIKLYSLCAADAINLDHPSTFDTLAMDP 213
++F+ L D KV L E + +E K V +Y+ ++ +P L
Sbjct: 135 VTFTALGTDRKVFFNILEEARELALQQEEGKTV--MYTAVGSEWRPFGYPRRRRPLN-SV 191
Query: 214 VLKQALID----DLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDI 269
VL+Q L D D+ F+ ++Y+ G ++RGYLLYGPPG GKSS I A+A L+ I
Sbjct: 192 VLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSI 251
Query: 270 YDMEXXXXXXXXXXXXXXVSTG-NRSILVIEDIDCSIELENRQCGGGYD-ENNSQVTLSG 327
+ +S +S++++ED+D + + + ++T SG
Sbjct: 252 CLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSG 311
Query: 328 LLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSY 373
LLN +DG+ S+ + RI+ TTN+ +RLDPAL+RPGR+D+ ++ Y
Sbjct: 312 LLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGY 355
>TAIR|locus:2115914 [details] [associations]
symbol:AT4G05340 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004
PROSITE:PS00674 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016787 eggNOG:COG0465
EMBL:AL161503 HSSP:P28691 IPI:IPI00522068 PIR:B85067
RefSeq:NP_192443.1 UniGene:At.54163 ProteinModelPortal:Q9M0W1
SMR:Q9M0W1 EnsemblPlants:AT4G05340.1 GeneID:825882
KEGG:ath:AT4G05340 TAIR:At4g05340 InParanoid:Q9M0W1
PhylomeDB:Q9M0W1 ArrayExpress:Q9M0W1 Genevestigator:Q9M0W1
Uniprot:Q9M0W1
Length = 96
Score = 239 (89.2 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 51/89 (57%), Positives = 63/89 (70%)
Query: 308 ENRQCGGGYDENNS------QVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLR 361
EN+ GG ++ N QV+LSGLL FVDGLWS+ +ERII+FTTN+KE+LDPA LR
Sbjct: 6 ENKDEGGNGEKQNKKKKNDPQVSLSGLLYFVDGLWSNSVEERIIIFTTNHKEKLDPAFLR 65
Query: 362 PGRMDMHIHMSYLTPGGFKILAFNYLKIK 390
PG+MD+HI M Y TP FK L YL I+
Sbjct: 66 PGKMDVHILMDYCTPVVFKKLDALYLDIR 94
>UNIPROTKB|I3LFK0 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 Ensembl:ENSSSCT00000027544
Uniprot:I3LFK0
Length = 419
Score = 252 (93.8 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 65/225 (28%), Positives = 118/225 (52%)
Query: 155 LSFSKLFKD-KVLNKYLPYVAERSKAIKETKKVIKLYSLCAADAINLDHPST---FDTLA 210
++F+ L D K+ L E + +E K V +Y+ ++ +P +++
Sbjct: 135 VTFTALGTDRKIFFNILEEARELALQQEEGKTV--MYTAVGSEWRPFGYPRRRRPLNSVV 192
Query: 211 MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIY 270
++ L ++ D+ F+ ++Y+ G ++RGYLLYGPPG GKSS I A+A L+ I
Sbjct: 193 LEQGLADRIVRDIREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSIC 252
Query: 271 DMEXXXXXXXXXXXXXXVSTG-NRSILVIEDIDCSIELENRQCGGGYD-ENNSQVTLSGL 328
+ +S +S++++ED+D + + + ++T SGL
Sbjct: 253 LLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAENPVKYQGLGRLTFSGL 312
Query: 329 LNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSY 373
LN +DG+ S+ + RI+ TTN+ +RLDPAL+RPGR+D+ ++ +
Sbjct: 313 LNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGH 355
>UNIPROTKB|Q5E9H5 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9913
"Bos taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
eggNOG:COG0465 GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW EMBL:BT020945 EMBL:BC103135 IPI:IPI00713658
RefSeq:NP_001015671.1 UniGene:Bt.5278 ProteinModelPortal:Q5E9H5
STRING:Q5E9H5 Ensembl:ENSBTAT00000004967 GeneID:539713
KEGG:bta:539713 CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 InParanoid:Q5E9H5
OrthoDB:EOG4TTGJ0 NextBio:20878172 GO:GO:0034551 GO:GO:0033617
Uniprot:Q5E9H5
Length = 419
Score = 251 (93.4 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 66/225 (29%), Positives = 118/225 (52%)
Query: 155 LSFSKLFKD-KVLNKYLPYVAERSKAIKETKKVIKLYSLCAADAINLDHPST---FDTLA 210
++F+ L D KV L E + +E K V +Y+ ++ +P +++
Sbjct: 135 VTFTALGTDRKVFFNILEEARELALQQEEGKTV--MYTAVGSEWRPFGYPRRRRPLNSVV 192
Query: 211 MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIY 270
++ + + ++ D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L+ I
Sbjct: 193 LEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSIC 252
Query: 271 DMEXXXXXXXXXXXXXXVSTG-NRSILVIEDIDCSIELENRQCGGGYD-ENNSQVTLSGL 328
+ +S +S++++ED+D + + + ++T SGL
Sbjct: 253 LLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAENPIKYQGLGRLTFSGL 312
Query: 329 LNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSY 373
LN +DG+ S+ + RI+ TTN+ +RLDPAL+RPGR+DM ++ +
Sbjct: 313 LNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYVGH 355
>GENEDB_PFALCIPARUM|PFF0155w [details] [associations]
symbol:PFF0155w "bcs1-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0006461
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:AL844505
RefSeq:XP_966022.1 ProteinModelPortal:C6KSN2
EnsemblProtists:PFF0155w:mRNA GeneID:3885965 KEGG:pfa:PFF0155w
EuPathDB:PlasmoDB:PF3D7_0603200 ProtClustDB:CLSZ2429496
Uniprot:C6KSN2
Length = 471
Score = 152 (58.6 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 43/150 (28%), Positives = 75/150 (50%)
Query: 157 FSKLFKDKVLNKYLPYVAERSKAIKETKKVIKLYSLCAADAINLDHPST---FDTLAMDP 213
+SK +K+LN Y+ + KE K + +Y + +P +++ +
Sbjct: 170 WSKYVFEKILNDAKVYIEK-----KEEGKTL-VYKSFGPEWRPFGNPKNKRPINSVILPE 223
Query: 214 VLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDME 273
L + +I+D+ F+ ++Y G ++R YLL+GPPG GKSSLI A+A Y F+I +
Sbjct: 224 NLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLITALAGYFDFNICTIN 283
Query: 274 XXXXXXXXXXXXXXVST-GNRSILVIEDID 302
++T ++IL++EDID
Sbjct: 284 INDIYLTDDRFIHLLATIPPKTILILEDID 313
Score = 136 (52.9 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 31/89 (34%), Positives = 54/89 (60%)
Query: 323 VTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKIL 382
V+ SGLLN +DG+ ++ +ERII TTN E+L P L+RPGR+DM I + Y +K +
Sbjct: 352 VSYSGLLNALDGIVAT--EERIIFMTTNNIEKLPPTLIRPGRVDMKILIPYANIYQYKKM 409
Query: 383 AFNYLKIKSHSMFDEIEELIKEVEVTPAE 411
+ + H + ++ ++ ++ ++ AE
Sbjct: 410 FLRFFP-EHHELSNKFAKIFQDFNLSMAE 437
>UNIPROTKB|C6KSN2 [details] [associations]
symbol:PFF0155w "Bcs1 protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0006461 GO:GO:0016887 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EMBL:AL844505 RefSeq:XP_966022.1
ProteinModelPortal:C6KSN2 EnsemblProtists:PFF0155w:mRNA
GeneID:3885965 KEGG:pfa:PFF0155w EuPathDB:PlasmoDB:PF3D7_0603200
ProtClustDB:CLSZ2429496 Uniprot:C6KSN2
Length = 471
Score = 152 (58.6 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 43/150 (28%), Positives = 75/150 (50%)
Query: 157 FSKLFKDKVLNKYLPYVAERSKAIKETKKVIKLYSLCAADAINLDHPST---FDTLAMDP 213
+SK +K+LN Y+ + KE K + +Y + +P +++ +
Sbjct: 170 WSKYVFEKILNDAKVYIEK-----KEEGKTL-VYKSFGPEWRPFGNPKNKRPINSVILPE 223
Query: 214 VLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDME 273
L + +I+D+ F+ ++Y G ++R YLL+GPPG GKSSLI A+A Y F+I +
Sbjct: 224 NLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLITALAGYFDFNICTIN 283
Query: 274 XXXXXXXXXXXXXXVST-GNRSILVIEDID 302
++T ++IL++EDID
Sbjct: 284 INDIYLTDDRFIHLLATIPPKTILILEDID 313
Score = 136 (52.9 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 31/89 (34%), Positives = 54/89 (60%)
Query: 323 VTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKIL 382
V+ SGLLN +DG+ ++ +ERII TTN E+L P L+RPGR+DM I + Y +K +
Sbjct: 352 VSYSGLLNALDGIVAT--EERIIFMTTNNIEKLPPTLIRPGRVDMKILIPYANIYQYKKM 409
Query: 383 AFNYLKIKSHSMFDEIEELIKEVEVTPAE 411
+ + H + ++ ++ ++ ++ AE
Sbjct: 410 FLRFFP-EHHELSNKFAKIFQDFNLSMAE 437
>ASPGD|ASPL0000007908 [details] [associations]
symbol:AN6397 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001301 eggNOG:COG0465 GO:GO:0017111
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
EMBL:AACD01000108 OrthoDB:EOG4BK8C9 RefSeq:XP_664001.1
ProteinModelPortal:Q5AZ83 EnsemblFungi:CADANIAT00006582
GeneID:2871293 KEGG:ani:AN6397.2 HOGENOM:HOG000201600 OMA:EEANAYS
Uniprot:Q5AZ83
Length = 518
Score = 151 (58.2 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 34/106 (32%), Positives = 58/106 (54%)
Query: 203 PS-TFDTLAMDPVLKQALIDDLDRFVKR--REFYSRVGKAWKRGYLLYGPPGTGKSSLIA 259
PS T+ +D K+A++DD+ +++ R++Y+ G ++RGYL GPPGTGK+SL +
Sbjct: 211 PSRAISTVILDSCKKKAVLDDMREYLREDTRQWYANHGIPYRRGYLFSGPPGTGKTSLSS 270
Query: 260 AMANYLKFDIYDMEXXXXXXXXXXXXXXVS-TGNRSILVIEDIDCS 304
A+A DIY + S + ++++EDID +
Sbjct: 271 ALAGVFGLDIYVLSLLDPNISESHFLRLFSEVPTQCVVLLEDIDAA 316
Score = 133 (51.9 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 323 VTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
++LS LLN +DG+ S G RI++ TTN + LDPAL+RPGR+DMHI
Sbjct: 357 ISLSALLNAIDGVSSQEG--RILIMTTNAPQDLDPALIRPGRVDMHI 401
>UNIPROTKB|G4NGV5 [details] [associations]
symbol:MGG_04018 "Mitochondrial chaperone BCS1, variant"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:CM001236 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003719831.1 EnsemblFungi:MGG_04018T1 GeneID:2677451
KEGG:mgr:MGG_04018 Uniprot:G4NGV5
Length = 610
Score = 135 (52.6 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 313 GGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
G G D ++LSGLLN +DG+ S G R+++ TTN E LD AL+RPGR+D+ + S
Sbjct: 432 GRGSDGEQKGISLSGLLNAIDGVASHEG--RVLIMTTNRPESLDDALIRPGRVDLQVAFS 489
Query: 373 YLT 375
T
Sbjct: 490 NAT 492
Score = 135 (52.6 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 34/125 (27%), Positives = 60/125 (48%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRR--EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
+T+ +D K A++ D++ +++ +Y+ G +RGYL +GPPGTGK+SL A+A
Sbjct: 283 NTVVLDQKQKTAVLSDMNEYLQPETPRWYANRGIPLRRGYLFHGPPGTGKTSLSFALAGV 342
Query: 265 LKFDIYDMEXXXXXXXXXXXXXXVST-GNRSILVIEDIDCS-IELENRQCGGGYDENNSQ 322
DIY + + R ++++EDID + + + G N
Sbjct: 343 FGLDIYVVSLLEPQLSEEDLSNLFNCLPRRCVVLLEDIDTAGLTRTEEKIGHSVRTNTKT 402
Query: 323 VTLSG 327
T +G
Sbjct: 403 TTTTG 407
>UNIPROTKB|G4MXF6 [details] [associations]
symbol:MGG_15496 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
RefSeq:XP_003713293.1 EnsemblFungi:MGG_15496T0 GeneID:12986165
KEGG:mgr:MGG_15496 Uniprot:G4MXF6
Length = 676
Score = 214 (80.4 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 72/255 (28%), Positives = 121/255 (47%)
Query: 174 AERSKAIKETKKVIKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVK--RRE 231
A+R++ + + K Y+ D+ L T+ D +K+ LI D+ ++ R+
Sbjct: 222 AQRARYVT-VRTCKKSYNGAHWDSTILRPTRPIQTVHFDEQVKKDLIADIINYLDPHTRD 280
Query: 232 FYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTG 291
FY + G ++RGYLL+GPPGTGK+SL A+A+ K ++Y +
Sbjct: 281 FYHQRGIPYRRGYLLHGPPGTGKTSLSLALASMFKLELYLLHVPSLANDGELESMFDELP 340
Query: 292 NRSILVIEDIDC-SI----ELENRQCG---------GGYDENNSQVTLSGLLNFVDGLWS 337
R I+++EDID I EL R G +EN S S L ++ L
Sbjct: 341 PRCIILLEDIDAVGIPRRNELAARMTGLDDKDDDEDDEDEENGSGRGRSTLSGLLNVLDG 400
Query: 338 SCGDE-RIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFD 396
E RI+ T+N ++LDPAL+RPGR+D I + + +++ +L++ + S
Sbjct: 401 VASQEGRIVFMTSNLADKLDPALVRPGRIDRKIFLGNINQESARLM---FLRMYAESDDS 457
Query: 397 EIEELIKEVEVTPAE 411
+ +L E+ +E
Sbjct: 458 QFADLGPAAEMEMSE 472
>UNIPROTKB|G4MN83 [details] [associations]
symbol:MGG_02058 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:CM001231 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 RefSeq:XP_003708818.1
EnsemblFungi:MGG_02058T0 GeneID:2681213 KEGG:mgr:MGG_02058
Uniprot:G4MN83
Length = 566
Score = 131 (51.2 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 31/98 (31%), Positives = 52/98 (53%)
Query: 208 TLAMDPVLKQALIDDLDRFVKRRE--FYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 265
T+ +D K A++ D++ +++ + +YS G +RGYL +GPPGTGK+SL A+A
Sbjct: 271 TVVLDQEQKTAVLSDMNEYLQPKTECWYSNRGIPLRRGYLFHGPPGTGKTSLSFALAGVF 330
Query: 266 KFDIYDMEXXXXXXXXXXXXXXVS-TGNRSILVIEDID 302
+IY + + R I+++EDID
Sbjct: 331 GLEIYVISLIEPQLSDEDLSTLFNGLPRRCIVLLEDID 368
Score = 119 (46.9 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 34/111 (30%), Positives = 56/111 (50%)
Query: 313 GGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
G G+ ++ +++SGLLN +DG+ + G RI + TTN E LD AL+R GR+D+ +
Sbjct: 403 GRGHGDDQKGISMSGLLNVIDGVAAHEG--RIFIMTTNKPEILDEALIRSGRVDLQVAFR 460
Query: 373 YLTPGG----FKILAFNYLKIKSHSMFDEIEELIK----EVEVTPAEEFMK 415
T F+ L +KS ++ K E +T A+E ++
Sbjct: 461 NATQQQASELFQRLYSTEKSVKSSRCLSPLDATDKKDDLETSITDADELIE 511
>TAIR|locus:2043619 [details] [associations]
symbol:AT2G45500 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0016558
"protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR Pfam:PF04212
eggNOG:COG0464 GO:GO:0017111 EMBL:AC003680 SMART:SM00745
HOGENOM:HOG000225146 IPI:IPI00786031 RefSeq:NP_182074.4
UniGene:At.36623 ProteinModelPortal:A8MRR2 SMR:A8MRR2 PaxDb:A8MRR2
PRIDE:A8MRR2 EnsemblPlants:AT2G45500.1 GeneID:819158
KEGG:ath:AT2G45500 TAIR:At2g45500 InParanoid:A8MRR2 OMA:EMINTTI
PhylomeDB:A8MRR2 ProtClustDB:CLSN2695921 Genevestigator:A8MRR2
Uniprot:A8MRR2
Length = 491
Score = 190 (71.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 94/383 (24%), Positives = 177/383 (46%)
Query: 44 LSSKLEGLFGKFSDQLTLIIEQSE-GFSVNEI--YQAAELYLSTRI-TPSIQQLRVSQAP 99
++ KL+G F +++ + E G + + Y+ A+ ++ TPS + S+
Sbjct: 48 IAYKLKGYFDLAKEEIAKGVRAEEWGLHDDALLHYRNAQRIMNEATSTPSPSYISSSEKE 107
Query: 100 REKSLSVTINEGQ-KVVDTFEGMQLTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFS 158
+ +S I+ Q +V + + + + +EN++T + Y S S TA + + + S
Sbjct: 108 KVRSYREKISNWQNQVSERLQALGKRTGVGMSENKRT-VAYPSSASVSSTASR-YRKTLS 165
Query: 159 K---LFKDKVLNKYLPYVAERS-KAIKETKKVI--KLYSLCAADAINLDHPSTFDTLAMD 212
+ + + V P A S K +KE+ V KL + ++ +D +A
Sbjct: 166 QKTPVARGGVATPRNPKDAAASPKPVKESGNVYDDKLVEMINTTIVDRSPSVKWDDVAGL 225
Query: 213 PVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDM 272
KQAL++ + KRR+ ++ + + RG LL+GPPG GK+ L A+A+ + +++
Sbjct: 226 NGAKQALLEMVILPAKRRDLFTGLRRP-ARGLLLFGPPGNGKTMLAKAVASESQATFFNV 284
Query: 273 EXXXXXXX-XXXXXXXVST-------GNRSILVIEDIDCSIELENRQCGGGYDENNSQVT 324
V T S++ +++ID SI + R +E + ++
Sbjct: 285 SASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEID-SI-MSTRSTSE--NEASRRLK 340
Query: 325 LSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAF 384
L+ F DG+ S+ D II+ TN + LD A+LR R+ I++ K+L
Sbjct: 341 SEFLIQF-DGVTSNPDDLVIIIGATNKPQELDDAVLR--RLVKRIYVPLPDSNVRKLLFK 397
Query: 385 NYLKIKSHSMFD-EIEELIKEVE 406
LK + HS+ D +I++++KE E
Sbjct: 398 TKLKCQPHSLSDGDIDKIVKETE 420
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 193 (73.0 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 76/266 (28%), Positives = 124/266 (46%)
Query: 183 TKKVIKLYSLCAADAINLDHPSTF-DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWK 241
TK L+ + A+ +TF D MD K+ +++ + F+K Y ++G
Sbjct: 331 TKGASSLFK-SKSKAVKATSTTTFKDVAGMDEA-KEEIMEFVS-FLKDPSRYKKLGARIP 387
Query: 242 RGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXXXXXXXVSTGNR 293
+G +L GPPGTGK+ L A A N+ D +M
Sbjct: 388 KGAILSGPPGTGKTLLAKATAGEAGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTP 447
Query: 294 SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFT-TNYK 352
I+ I++ID +R GG+ + + TL+ LL +DG S+ G ++VF TN
Sbjct: 448 CIVFIDEIDAVGRARSR---GGFHNDERENTLNQLLVEMDGFSSTSG---VVVFAGTNRS 501
Query: 353 ERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEELIKEVE-VTPAE 411
+ LDPALLRPGR D I++ G K + +LK + + E+EE+ K++ +TP
Sbjct: 502 DVLDPALLRPGRFDRQIYVGKPDIKGRKDIFMVHLK--NIKLDGEMEEIAKKLATLTPG- 558
Query: 412 EFMKSEDADVALNGLVDFLLRKKEQT 437
F ++ A+V G + + +K+ T
Sbjct: 559 -FSGADIANVCNEGAL--VAARKDAT 581
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 190 (71.9 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 66/194 (34%), Positives = 94/194 (48%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAM 261
TFD +A K+ LI+ +D F+K R+ ++++G +G LL G PGTGK+ L IA
Sbjct: 156 TFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 262 ANYLKFDIY--DMEXXXXXXXXXXXXXXVSTGNRS---ILVIEDIDCSIELENRQCGGGY 316
AN F I D G + I+ +++ID GGG
Sbjct: 215 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGN 274
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTP 376
DE TL+ LL +DG S+ G +I+ TN + LDPALLRPGR D + +S
Sbjct: 275 DEREQ--TLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQVTISIPDI 330
Query: 377 GGF-KILAFNYLKI 389
G KI+A + K+
Sbjct: 331 NGREKIIAVHAKKV 344
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 190 (71.9 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 66/194 (34%), Positives = 94/194 (48%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAM 261
TFD +A K+ LI+ +D F+K R+ ++++G +G LL G PGTGK+ L IA
Sbjct: 156 TFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 262 ANYLKFDIY--DMEXXXXXXXXXXXXXXVSTGNRS---ILVIEDIDCSIELENRQCGGGY 316
AN F I D G + I+ +++ID GGG
Sbjct: 215 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGN 274
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTP 376
DE TL+ LL +DG S+ G +I+ TN + LDPALLRPGR D + +S
Sbjct: 275 DEREQ--TLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQVTISIPDI 330
Query: 377 GGF-KILAFNYLKI 389
G KI+A + K+
Sbjct: 331 NGREKIIAVHAKKV 344
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 189 (71.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 81/298 (27%), Positives = 126/298 (42%)
Query: 96 SQAPREKSLS--VTINEGQKVVD-TFEGMQLTWELVTTENQKTSL--DYDSGLYASE--- 147
SQ P E LS +T+++ K+ + T + + E+ TT+ K S +Y + +Y E
Sbjct: 34 SQKPEEVPLSQIITLSQEHKIAEITVDSENI--EVTTTDGTKLSTVKEYIASIYDIEGLD 91
Query: 148 -TAHKSFHLSFSKLFKDKVLNKYLPYVAERSKAI------KETKKVIKLYSLCAADAINL 200
T K L ++ YLP++ I + + A N+
Sbjct: 92 LTDVKVNIQPAGGLDWGTMILTYLPFLIFGGLLIFIFTQARGANNQAVSFGRSKAKLFNM 151
Query: 201 DHPS-TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIA 259
D P+ TF +A KQ + ++ F+K RE + +G +G LL GPPGTGK+ L
Sbjct: 152 DKPTITFANVAGVDEAKQE-VGEVVEFLKSREKFQALGARIPKGILLIGPPGTGKTLLAK 210
Query: 260 AMANY--LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQ 311
A+A + F + +M I+ I++ID
Sbjct: 211 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGAG 270
Query: 312 CGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
GGG+DE TL+ +L +DG I++ TN + LDPALLRPGR D +
Sbjct: 271 LGGGHDEREQ--TLNQILVEMDGF--DTDTSVIVIAATNRPDILDPALLRPGRFDRRV 324
>TAIR|locus:2115944 [details] [associations]
symbol:AT4G05370 "AT4G05370" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161503
InterPro:IPR025753 Pfam:PF14363 EMBL:BT029322 IPI:IPI00544016
PIR:E85067 RefSeq:NP_192446.1 UniGene:At.51016 PRIDE:Q9M0V8
DNASU:825885 EnsemblPlants:AT4G05370.1 GeneID:825885
KEGG:ath:AT4G05370 TAIR:At4g05370 eggNOG:NOG243159
HOGENOM:HOG000153210 OMA:IIDEFEG PhylomeDB:Q9M0V8
ProtClustDB:CLSN2915942 ArrayExpress:Q9M0V8 Genevestigator:Q9M0V8
Uniprot:Q9M0V8
Length = 149
Score = 165 (63.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 41/137 (29%), Positives = 77/137 (56%)
Query: 1 MPSTSSVLSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKF-SDQL 59
+PS S++ S YT+ +A +L +TIL E FIP ++D + SK F + +
Sbjct: 9 IPSLSAIFSVYTSLSAFTILFKTILYE-------FIPVNIRDFIISKFTDYFSFYLNSNF 61
Query: 60 TLIIEQSEGFSVNEIYQAAELYLSTRITP-SIQQLRVSQAPREKSLSVT---INEGQKVV 115
T IIE+ + +N+ ++AA++YL T ++ + + L VS + + ++ I K++
Sbjct: 62 TFIIEEQSDYVMNQTFRAAQVYLPTLLSRITTRSLLVSSSDLKNPMAKPKFGIPVKAKII 121
Query: 116 DTFEGMQLTWELVTTEN 132
D FEG++L W L++ ++
Sbjct: 122 DEFEGIRLEWTLLSAKD 138
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 188 (71.2 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 57/173 (32%), Positives = 84/173 (48%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 263
TFD +A K L + +D +++ + + R+G +G LL GPPGTGK+ L A+A
Sbjct: 173 TFDDVAGMENPKMELKEIVD-YLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGE 231
Query: 264 ----YLKFDIYDMEXXXXXXXXXXXXXXVSTGNRS---ILVIEDIDCSIELENRQCGGGY 316
+L +T +S I+ I+++D GGG+
Sbjct: 232 ADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGGGH 291
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
DE TL+ LL+ +DG S DE I++ TN + LDPALLRPGR D H+
Sbjct: 292 DEREQ--TLNQLLSEMDGFDSH--DEVIVMAATNRPDVLDPALLRPGRFDRHV 340
>TAIR|locus:2095467 [details] [associations]
symbol:AT3G28560 "AT3G28560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG0465 EMBL:AP000420
InterPro:IPR025753 Pfam:PF14363 EMBL:AY924779 EMBL:DQ132691
IPI:IPI00534445 RefSeq:NP_189497.1 UniGene:At.53542
UniGene:At.73270 EnsemblPlants:AT3G28560.1 GeneID:822486
KEGG:ath:AT3G28560 TAIR:At3g28560 PhylomeDB:Q9LJJ9
Genevestigator:Q9LJJ9 Uniprot:Q9LJJ9
Length = 257
Score = 175 (66.7 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 64/255 (25%), Positives = 119/255 (46%)
Query: 1 MPSTSSVLSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKFSDQLT 60
M T S+ + S M + N+V ++I KL +S+ + F ++S
Sbjct: 1 MLETGSIWGFTGSTMTSLMFFWAMYNQVHI--EKYI-YKLMGWVSNSVHIKFNEYS---- 53
Query: 61 LIIEQSEGFSVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEG 120
EG +E + YLST+ T +L+ +++ + KSL +++++ + V D F+G
Sbjct: 54 -----GEGLEKSEAFDTIHNYLSTKSTALGNRLKANESKKSKSLVLSLDDHETVEDVFQG 108
Query: 121 MQLTWELVTTENQ-KTSLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVAERSKA 179
+++ W ENQ ++S + D G +E + + LSF ++ + YL +V K
Sbjct: 109 VKVKWSSSVRENQNQSSTNRDKGF--AERRYLT--LSFHSRHREMITTTYLDHVLREGKE 164
Query: 180 IKETKKVIKLYSLCAADA------------INLDHPSTFDTLAMDPVLKQALIDDLDRFV 227
I K+ KLY+ ++ ++ DHP+T +T AMDP +A + + +
Sbjct: 165 IGLKKRERKLYTNNSSHEWISWRLGTNWSNVSFDHPATLETFAMDPEKNKA---EKEAWK 221
Query: 228 KRREFYSRVGKAWKR 242
KRR R+ + +R
Sbjct: 222 KRRRKRGRLLRKKRR 236
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 182 (69.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 62/183 (33%), Positives = 86/183 (46%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 165 ELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIR 224
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG + S G
Sbjct: 225 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDG-FDSLGQ 280
Query: 342 ERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIEE 400
++I+ TN + LDPALLRPGR+D I + +IL + LKI H D E
Sbjct: 281 VKMIM-ATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEID-YEA 338
Query: 401 LIK 403
++K
Sbjct: 339 IVK 341
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 186 (70.5 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 66/228 (28%), Positives = 105/228 (46%)
Query: 195 ADAINLDHP-STF-DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGT 252
A ++ D P +TF D +D +++ + ++ F++ Y +G +G LLYGPPGT
Sbjct: 150 AKQLSKDMPKTTFADVAGVDEAVEE--LYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGT 207
Query: 253 GKSSLIAAMANY--LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCS 304
GK+ L A+A + F D +M + I+ +++ID
Sbjct: 208 GKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAV 267
Query: 305 IELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGR 364
GGG+DE TL+ LL +DG G I++ TN + LDPALLRPGR
Sbjct: 268 GRQRGAGLGGGHDEREQ--TLNQLLVEMDGFGDRAGV--ILIAATNRPDILDPALLRPGR 323
Query: 365 MDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEELIKE-VEVTPAE 411
D I +S G + + + K K + +++ L K V +T A+
Sbjct: 324 FDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGAD 371
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 181 (68.8 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 71/219 (32%), Positives = 106/219 (48%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST+D + +D +K+ + + ++ VK E + +G A +G
Sbjct: 125 KVDPLVSLMMVEKVP---DSTYDMVGGLDKQIKE-IKEVIELPVKHPELFESLGIAQPKG 180
Query: 244 YLLYGPPGTGKSSLIAAMANYL--KF------DIYDMEXXXXXXXXXXXXXXVSTGNRSI 295
+LYGPPGTGK+ L A+A++ KF ++ SI
Sbjct: 181 VILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 240
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI +R G ++ Q T+ LLN +DG SS D +II+ TN + L
Sbjct: 241 IFMDEID-SIG-SSRVEGSSGGDSEVQRTMLELLNQLDGFESS-KDIKIIM-ATNRLDIL 296
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
DPALLRPGR+D I P + LKI S SM
Sbjct: 297 DPALLRPGRIDRKIEF----PAPTVAARTDILKIHSRSM 331
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 180 (68.4 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 65/218 (29%), Positives = 99/218 (45%)
Query: 227 VKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXX 278
+K E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 152 LKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESA 211
Query: 279 XXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWS 337
++ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 212 RIIREMFGYAKEHEPCVIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDG-FD 267
Query: 338 SCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTP-GGFKILAFNYLKIKSHSMFD 396
G +II+ TN + LDPALLRPGR+D I + G +IL + K+ D
Sbjct: 268 YLGQTKIIM-ATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEID 326
Query: 397 EIEELIKEVEVTPAEEFMK--SEDADVALNGLVDFLLR 432
E L+K + T + +E +A+ D++++
Sbjct: 327 -YEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQ 363
>UNIPROTKB|H7BZF6 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7BZF6 Ensembl:ENST00000436603 Uniprot:H7BZF6
Length = 121
Score = 160 (61.4 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 240 WKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTG-NRSILVI 298
++RGYLLYGPPG GKSS I A+A L+ I + +S +S++++
Sbjct: 4 YRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLL 63
Query: 299 EDIDCSIELENRQCGGGYD-ENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKER 354
ED+D + + + ++T SGLLN +DG+ S+ + RI+ TTN+ +R
Sbjct: 64 EDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDR 118
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 180 (68.4 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 66/219 (30%), Positives = 108/219 (49%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
K+ L SL + I ST+D + +D +K+ + + ++ +K E + +G A +G
Sbjct: 126 KIDPLVSLMKVEKIP---DSTYDMVGGLDKQIKE-IKEVIELPIKHPELFESLGIAQPKG 181
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + + SI
Sbjct: 182 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSI 241
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI + G G ++ Q T+ LLN +DG S+ + ++ TN + L
Sbjct: 242 IFMDEID-SIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIK--VLMCTNRIDIL 298
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
DPALLRPGR+D I + PG L + LKI S M
Sbjct: 299 DPALLRPGRIDRKIE--FPNPGDAGRL--DILKIHSRKM 333
>UNIPROTKB|G4MMM3 [details] [associations]
symbol:MGG_16395 "ATP-dependent Zn protease" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524
GO:GO:0006508 GO:GO:0008233 EMBL:CM001231 RefSeq:XP_003710407.1
ProteinModelPortal:G4MMM3 EnsemblFungi:MGG_16395T0 GeneID:12986318
KEGG:mgr:MGG_16395 Uniprot:G4MMM3
Length = 477
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 59/182 (32%), Positives = 86/182 (47%)
Query: 196 DAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKS 255
+ N +++D + +DP +KQALIDD F K R Y ++ WKRG + YGPPG GK+
Sbjct: 182 ELFNSIRKASWDNVILDPSMKQALIDDHMSFFKSRGQYEKLKVPWKRGIIYYGPPGNGKT 241
Query: 256 SLIAAMANYLKFDIYD------MEXXXXXXXXXXXXXXVSTGNRSI----LVIEDIDCSI 305
I A N L + + D + + +G R++ LV ED+D +
Sbjct: 242 VSIKATMNML-YKLKDPVPTLYVRSLVSWMGPEAALSMIFSGARAMAPCYLVFEDLDSIV 300
Query: 306 ELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALL-RPGR 364
N V S LN VDGL ++ D ++ +TN+ ERLDP + RP R
Sbjct: 301 --------------NDSVR-SYFLNEVDGLKNN--DGIFMIGSTNHLERLDPGISKRPSR 343
Query: 365 MD 366
D
Sbjct: 344 FD 345
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 60/174 (34%), Positives = 83/174 (47%)
Query: 205 TF-DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
TF D +D V K+ L + ++ F+K Y+ +G +G LL+G PGTGK+ L A+A
Sbjct: 156 TFADVAGIDEV-KEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAG 213
Query: 264 Y--LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGG 315
+ F D +M I+ I++ID GGG
Sbjct: 214 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGG 273
Query: 316 YDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
+DE TL+ LL +DG S+ G II+ TN + LDPALLRPGR D HI
Sbjct: 274 HDEREQ--TLNQLLVEMDGFNSNEGI--IIIAATNRPDILDPALLRPGRFDRHI 323
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 60/174 (34%), Positives = 83/174 (47%)
Query: 205 TF-DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
TF D +D V K+ L + ++ F+K Y+ +G +G LL+G PGTGK+ L A+A
Sbjct: 156 TFADVAGIDEV-KEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAG 213
Query: 264 Y--LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGG 315
+ F D +M I+ I++ID GGG
Sbjct: 214 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGG 273
Query: 316 YDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
+DE TL+ LL +DG S+ G II+ TN + LDPALLRPGR D HI
Sbjct: 274 HDEREQ--TLNQLLVEMDGFNSNEGI--IIIAATNRPDILDPALLRPGRFDRHI 323
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 176 (67.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 60/200 (30%), Positives = 100/200 (50%)
Query: 204 STFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA 262
ST+D + +D +K+ + + ++ +K E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 158 STYDMIGGLDQQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 263 N-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SILVIEDIDCSIELENRQCGG 314
+ +++ ++ + V SI+ +++ID SI + G
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSARMESGS 275
Query: 315 GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYL 374
G ++ Q T+ LLN +DG +S ++ ++ TN + LD ALLRPGR+D I
Sbjct: 276 GNGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEF--- 330
Query: 375 TPGGFKILAFNYLKIKSHSM 394
P + F+ LKI S M
Sbjct: 331 -PNPNEESRFDILKIHSRKM 349
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 176 (67.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 60/200 (30%), Positives = 100/200 (50%)
Query: 204 STFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA 262
ST+D + +D +K+ + + ++ +K E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 158 STYDMIGGLDQQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 263 N-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SILVIEDIDCSIELENRQCGG 314
+ +++ ++ + V SI+ +++ID SI + G
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSARMESGS 275
Query: 315 GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYL 374
G ++ Q T+ LLN +DG +S ++ ++ TN + LD ALLRPGR+D I
Sbjct: 276 GNGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRKIEF--- 330
Query: 375 TPGGFKILAFNYLKIKSHSM 394
P + F+ LKI S M
Sbjct: 331 -PNPNEESRFDILKIHSRKM 349
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 178 (67.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 58/173 (33%), Positives = 84/173 (48%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TFD +A K+ L +++ F++ + +SR+G +G LL GPPGTGK+ L A+A
Sbjct: 154 TFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGE 212
Query: 265 --LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGY 316
+ F D +M I+ I++ID GGG
Sbjct: 213 AGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGN 272
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
DE TL+ LL +DG ++ G II+ TN K+ LDPALLRPGR D ++
Sbjct: 273 DEREQ--TLNQLLVEMDGFEANEGV--IILAATNRKDVLDPALLRPGRFDRNV 321
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 178 (67.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 58/173 (33%), Positives = 84/173 (48%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TFD +A K+ L +++ F++ + +SR+G +G LL GPPGTGK+ L A+A
Sbjct: 154 TFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGE 212
Query: 265 --LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGY 316
+ F D +M I+ I++ID GGG
Sbjct: 213 AGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGN 272
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
DE TL+ LL +DG ++ G II+ TN K+ LDPALLRPGR D ++
Sbjct: 273 DEREQ--TLNQLLVEMDGFEANEGV--IILAATNRKDVLDPALLRPGRFDRNV 321
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 174 (66.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 60/183 (32%), Positives = 85/183 (46%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LL+GPPGTGK+ L A+A N+LK I D
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIR 233
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG + S G
Sbjct: 234 EMFNYARDHQPCIVFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQLDG-FDSLGK 289
Query: 342 ERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIEE 400
++I+ TN + LDPALLRPGR+D I + +IL + KI H D E
Sbjct: 290 VKVIM-ATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEID-FEA 347
Query: 401 LIK 403
++K
Sbjct: 348 VVK 350
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 174 (66.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 60/183 (32%), Positives = 85/183 (46%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LL+GPPGTGK+ L A+A N+LK I D
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIR 233
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG + S G
Sbjct: 234 EMFNYARDHQPCIVFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQLDG-FDSLGK 289
Query: 342 ERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIEE 400
++I+ TN + LDPALLRPGR+D I + +IL + KI H D E
Sbjct: 290 VKVIM-ATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEID-FEA 347
Query: 401 LIK 403
++K
Sbjct: 348 VVK 350
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 61/210 (29%), Positives = 97/210 (46%)
Query: 205 TFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA- 262
TFD + + +++ L + ++ +K E + RVG +G LLYGPPGTGK+ L A+A
Sbjct: 179 TFDGIGGLTEQIRE-LREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237
Query: 263 ----NYL---KFDIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGG 315
N++ I D I+ ++++D + R+ G
Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDA---IGGRRFSEG 294
Query: 316 YDENNS-QVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYL 374
+ Q TL LL +DG + + G +II+ TN + LDPALLRPGR+D + +
Sbjct: 295 TSADREIQRTLMELLTQMDG-FDNLGQTKIIM-ATNRPDTLDPALLRPGRLDRKVEIPLP 352
Query: 375 TPGG-FKILAFNYLKIKSHSMFDEIEELIK 403
G +I + K+K FD E +K
Sbjct: 353 NEAGRLEIFKIHTAKVKKTGEFD-FEAAVK 381
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 185 (70.2 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 68/212 (32%), Positives = 104/212 (49%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN--- 263
D +D K+ +++ + +F+K +FY R+G RG +L GPPGTGK+ L A A
Sbjct: 297 DVAGVDEA-KEEIMEFV-KFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEAN 354
Query: 264 --YLKFDIYDMEXXXXXXXXXXXXXXVSTGNRS---ILVIEDIDCSIELENRQCGGGYDE 318
+L + +T ++ I+ I++ID + R GG +
Sbjct: 355 VPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGR--GGQFGS 412
Query: 319 NNS-QVTLSGLLNFVDGLWSSCGDERIIVFT-TNYKERLDPALLRPGRMDMHIHMSYLTP 376
N+ + TL+ LL +DG SS E I+VF TN + LDPALLRPGR D I +
Sbjct: 413 NDERESTLNQLLVEMDGFTSS---EHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDI 469
Query: 377 GGFKILAFNYLK-IKSHSMFDEIEELIKEVEV 407
GG + + +LK IK+ D I+ + K + V
Sbjct: 470 GGREQIFKVHLKHIKAA---DNIDLIAKRLAV 498
Score = 37 (18.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 6 SVLSTYTTFAASAMLVRTIL 25
SVL+T +FA + +++ +++
Sbjct: 238 SVLATLLSFAPTLLIIGSVI 257
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 175 (66.7 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 61/176 (34%), Positives = 85/176 (48%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAM 261
TF+ +A K+ LI+ +D F+K R+ + ++G +G LL G PGTGK+ L IA
Sbjct: 154 TFNDVAGIDEAKEELIEIVD-FLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 262 ANYLKFDIY--DMEXXXXXXXXXXXXXXVSTGNRS---ILVIEDIDCSIELENRQCGGGY 316
AN F I D G ++ I+ I++ID GGG
Sbjct: 213 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGN 272
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
DE TL+ LL +DG S+ G II+ TN + LD ALLRPGR D + +S
Sbjct: 273 DEREQ--TLNQLLVEMDGFESNEGV--IIIAATNRPDVLDSALLRPGRFDRQVTIS 324
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 175 (66.7 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 61/176 (34%), Positives = 85/176 (48%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAM 261
TF+ +A K+ LI+ +D F+K R+ + ++G +G LL G PGTGK+ L IA
Sbjct: 154 TFNDVAGIDEAKEELIEIVD-FLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 262 ANYLKFDIY--DMEXXXXXXXXXXXXXXVSTGNRS---ILVIEDIDCSIELENRQCGGGY 316
AN F I D G ++ I+ I++ID GGG
Sbjct: 213 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGN 272
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
DE TL+ LL +DG S+ G II+ TN + LD ALLRPGR D + +S
Sbjct: 273 DEREQ--TLNQLLVEMDGFESNEGV--IIIAATNRPDVLDSALLRPGRFDRQVTIS 324
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 169 (64.5 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 65/219 (29%), Positives = 103/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + I ST++ + ++ +K+ + + ++ VK E + +G +G
Sbjct: 126 KVDPLVSLMMVEKIP---DSTYEMVGGLEKQIKE-IKEVIELPVKHPELFESLGIPQPKG 181
Query: 244 YLLYGPPGTGKSSLIAAMANYL--KF------DIYDMEXXXXXXXXXXXXXXVSTGNRSI 295
LLYGPPGTGK+ L A+A++ KF ++ SI
Sbjct: 182 ILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 241
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI GG ++ Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 242 IFMDEID-SIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 298
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
DPALLRPGR+D I P + A L+I S SM
Sbjct: 299 DPALLRPGRIDRKIEFP---PPSAEARA-EILRIHSRSM 333
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 55/162 (33%), Positives = 77/162 (47%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LKF------ 267
KQ L++ ++ F+K ++ VG +G LL GPPGTGK+ L A+A + F
Sbjct: 171 KQELVEVVE-FLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGS 229
Query: 268 DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSG 327
D +M I+ I++ID GGG+DE TL+
Sbjct: 230 DFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQ--TLNQ 287
Query: 328 LLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
LL +DG ++ G II+ TN + LDPALLRPGR D I
Sbjct: 288 LLVEMDGFGANEGI--IIIAATNRPDILDPALLRPGRFDRQI 327
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 54/173 (31%), Positives = 84/173 (48%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 263
TF+ +A K+ L +++ +F+K + ++++G +G LL GPPGTGK+ L A+A
Sbjct: 151 TFEDVAGVDEAKEEL-EEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGE 209
Query: 264 ----YLKFDIYDMEXXXXXXXXXXXXXXVSTGNRS---ILVIEDIDCSIELENRQCGGGY 316
+ D G ++ I+ I++ID GGG+
Sbjct: 210 AGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGAGLGGGH 269
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
DE TL+ LL +DG S+ G I++ TN + LDPALLRPGR D +
Sbjct: 270 DEREQ--TLNQLLVEMDGFESNEGV--ILIAATNRPDVLDPALLRPGRFDRQV 318
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 64/213 (30%), Positives = 101/213 (47%)
Query: 203 PSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL---IA 259
P F+ +A K L++ +D F+K RE Y +G +G LL GPPG+GK+ L +A
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 260 AMAN--YL-----KF-DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQ 311
AN Y+ +F +IY + V+ SI+ I++ID +
Sbjct: 204 TEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAP---SIVFIDEIDAIGGKRSSG 260
Query: 312 CGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHM 371
G + TL+ LL +DG ++ +++ TN + LD ALLRPGR D +++
Sbjct: 261 SVNGAGQREHDQTLNQLLVEMDGFSNTV--HIMVIGATNRIDTLDSALLRPGRFDRIVYV 318
Query: 372 SYLTPGGFK-ILAFNYLKIKSHSMFDEIEELIK 403
G K IL KIKS ++IE++ +
Sbjct: 319 PLPDINGRKKILEIYIKKIKSDLKLEDIEKIAR 351
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 64/213 (30%), Positives = 101/213 (47%)
Query: 203 PSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL---IA 259
P F+ +A K L++ +D F+K RE Y +G +G LL GPPG+GK+ L +A
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 260 AMAN--YL-----KF-DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQ 311
AN Y+ +F +IY + V+ SI+ I++ID +
Sbjct: 204 TEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAP---SIVFIDEIDAIGGKRSSG 260
Query: 312 CGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHM 371
G + TL+ LL +DG ++ +++ TN + LD ALLRPGR D +++
Sbjct: 261 SVNGAGQREHDQTLNQLLVEMDGFSNTV--HIMVIGATNRIDTLDSALLRPGRFDRIVYV 318
Query: 372 SYLTPGGFK-ILAFNYLKIKSHSMFDEIEELIK 403
G K IL KIKS ++IE++ +
Sbjct: 319 PLPDINGRKKILEIYIKKIKSDLKLEDIEKIAR 351
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 58/188 (30%), Positives = 86/188 (45%)
Query: 227 VKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKFD----IYDMEXXXX 277
+K E ++RVG +G LLYGPPGTGK+ L A+A N++ F I D
Sbjct: 192 LKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFI-FSPASAIVDKYIGES 250
Query: 278 XXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLW 336
I+ ++++D + R+ G + Q TL LLN +DG +
Sbjct: 251 ARLIREMFAYAKEHEPCIIFMDEVDA---IGGRRFSEGTSADREIQRTLMELLNQMDG-F 306
Query: 337 SSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMF 395
+ G +II+ TN + LDPALLR GR+D I + G +I + K+ F
Sbjct: 307 DTLGQTKIIM-ATNRPDTLDPALLRAGRLDRKIEIGLPNEAGRLEIFKIHTSKVAKQGEF 365
Query: 396 DEIEELIK 403
D E +K
Sbjct: 366 D-FEAAVK 372
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 167 (63.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 65/219 (29%), Positives = 104/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + + ++ VK E + +G A +G
Sbjct: 129 KVDPLVSLMMVEKVP---DSTYEMVGGLDKQIKE-IKEVIELPVKHPELFDALGIAQPKG 184
Query: 244 YLLYGPPGTGKSSLIAAMANYLKFDIYDM------EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A++ + + + V SI
Sbjct: 185 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 244
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI + G G D + Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 245 IFMDEID-SIGSSRIESGSGGD-SEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 300
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
DPALLRPGR+D I P + + LKI S M
Sbjct: 301 DPALLRPGRIDRKIEF----PPPNEEARLDILKIHSRKM 335
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 167 (63.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 54/183 (29%), Positives = 92/183 (50%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFD-- 268
KQ + + ++ + + + YS++G RG LLYGPPGTGK+ L+ A+AN +++ +
Sbjct: 164 KQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGS 223
Query: 269 IYDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDENNSQVTLSG 327
+ + ++ N +I+ I++ID +I + G D ++ L
Sbjct: 224 EFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEID-AIATKRFDAQTGADREVQRILLE- 281
Query: 328 LLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYL 387
LLN +DG + ++I+ TN + LDPALLRPGR+D I L + L F+ +
Sbjct: 282 LLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLDRKIEFPSLKDRRERRLIFSTI 339
Query: 388 KIK 390
K
Sbjct: 340 ASK 342
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 167 (63.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 54/183 (29%), Positives = 92/183 (50%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFD-- 268
KQ + + ++ + + + YS++G RG LLYGPPGTGK+ L+ A+AN +++ +
Sbjct: 164 KQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGS 223
Query: 269 IYDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDENNSQVTLSG 327
+ + ++ N +I+ I++ID +I + G D ++ L
Sbjct: 224 EFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEID-AIATKRFDAQTGADREVQRILLE- 281
Query: 328 LLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYL 387
LLN +DG + ++I+ TN + LDPALLRPGR+D I L + L F+ +
Sbjct: 282 LLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLDRKIEFPSLKDRRERRLIFSTI 339
Query: 388 KIK 390
K
Sbjct: 340 ASK 342
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 61/200 (30%), Positives = 98/200 (49%)
Query: 204 STFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA 262
ST+D + +D +K+ + + ++ +K E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 129 STYDMIGGLDQQIKE-IKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 187
Query: 263 NYL--KF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGG 314
++ +F ++ SI+ +++ID SI +R
Sbjct: 188 HHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIG-SSRIDSA 245
Query: 315 GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYL 374
G ++ Q T+ LLN +DG + + I+ TN + LDPALLRPGR+D I
Sbjct: 246 GSGDSEVQRTMLELLNQLDGFEPTKNIK--IIMATNRLDILDPALLRPGRIDRKIEFP-- 301
Query: 375 TPGGFKILAFNYLKIKSHSM 394
P + A + L+I S SM
Sbjct: 302 -PPSVEARA-DILRIHSRSM 319
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 167 (63.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 51/147 (34%), Positives = 74/147 (50%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E+Y +G +G +LYGPPGTGK+ L A+AN +L+ ++
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID +I + G E Q T+ LLN +DG + S GD
Sbjct: 269 ELFRVAEEHGPSIVFIDEID-AIGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 325
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 326 KVIM-ATNRIETLDPALIRPGRIDRKI 351
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 165 (63.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 51/147 (34%), Positives = 74/147 (50%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E+Y +G +G +LYGPPGTGK+ L A+AN +L+ ++
Sbjct: 136 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 195
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID +I + G E Q T+ LLN +DG + S GD
Sbjct: 196 ELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 252
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 253 KVIM-ATNRIETLDPALIRPGRIDRKI 278
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 165 (63.1 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 59/184 (32%), Positives = 82/184 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 149 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 208
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 209 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTL--- 262
Query: 342 ERI-IVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIE 399
R+ ++ TN + LDPALLRPGR+D IH+ IL + I H D E
Sbjct: 263 HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID-YE 321
Query: 400 ELIK 403
++K
Sbjct: 322 AIVK 325
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 55/175 (31%), Positives = 85/175 (48%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 263
TFD + Q L + ++ + E+Y +G +G +LYG PGTGK+ L A+AN
Sbjct: 181 TFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANS 240
Query: 264 ----YLKF---DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGY 316
+++ D+ + SI+ I++ID ++ + R
Sbjct: 241 TSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEID-AVGTK-RFDTSSR 298
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHM 371
E Q TL LLN +DG + S GD +II+ TN + LDPAL+RPGR+D I +
Sbjct: 299 GEQEVQRTLLELLNQLDG-FESRGDVKIIM-ATNRIDSLDPALIRPGRIDRKIEL 351
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 59/184 (32%), Positives = 82/184 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 217 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTL--- 270
Query: 342 ERI-IVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIE 399
R+ ++ TN + LDPALLRPGR+D IH+ IL + I H D E
Sbjct: 271 HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID-YE 329
Query: 400 ELIK 403
++K
Sbjct: 330 AIVK 333
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 59/184 (32%), Positives = 82/184 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 217 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTL--- 270
Query: 342 ERI-IVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIE 399
R+ ++ TN + LDPALLRPGR+D IH+ IL + I H D E
Sbjct: 271 HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID-YE 329
Query: 400 ELIK 403
++K
Sbjct: 330 AIVK 333
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 59/184 (32%), Positives = 82/184 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 217 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTL--- 270
Query: 342 ERI-IVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIE 399
R+ ++ TN + LDPALLRPGR+D IH+ IL + I H D E
Sbjct: 271 HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID-YE 329
Query: 400 ELIK 403
++K
Sbjct: 330 AIVK 333
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 59/184 (32%), Positives = 82/184 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 217 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTL--- 270
Query: 342 ERI-IVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIE 399
R+ ++ TN + LDPALLRPGR+D IH+ IL + I H D E
Sbjct: 271 HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID-YE 329
Query: 400 ELIK 403
++K
Sbjct: 330 AIVK 333
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 59/184 (32%), Positives = 82/184 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 217 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTL--- 270
Query: 342 ERI-IVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIE 399
R+ ++ TN + LDPALLRPGR+D IH+ IL + I H D E
Sbjct: 271 HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID-YE 329
Query: 400 ELIK 403
++K
Sbjct: 330 AIVK 333
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 59/184 (32%), Positives = 82/184 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 217 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTL--- 270
Query: 342 ERI-IVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIE 399
R+ ++ TN + LDPALLRPGR+D IH+ IL + I H D E
Sbjct: 271 HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID-YE 329
Query: 400 ELIK 403
++K
Sbjct: 330 AIVK 333
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 51/148 (34%), Positives = 72/148 (48%)
Query: 233 YSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXXXX 284
Y RVG +G LLYGPPGTGK+ L AMA N+++ I D
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREM 222
Query: 285 XXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGDER 343
I+ +++ID + R+ G + Q TL LLN +DG + G+ +
Sbjct: 223 FNYAKEHQPCIIFMDEIDA---IGGRRFSQGTSADREIQRTLMELLNHLDG-FEELGNVK 278
Query: 344 IIVFTTNYKERLDPALLRPGRMDMHIHM 371
II+ TN + LDPAL+RPGR+D I +
Sbjct: 279 IIM-ATNRPDVLDPALVRPGRLDRKIEI 305
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 51/148 (34%), Positives = 72/148 (48%)
Query: 233 YSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXXXX 284
Y RVG +G LLYGPPGTGK+ L AMA N+++ I D
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREM 222
Query: 285 XXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGDER 343
I+ +++ID + R+ G + Q TL LLN +DG + G+ +
Sbjct: 223 FNYAKEHQPCIIFMDEIDA---IGGRRFSQGTSADREIQRTLMELLNHLDG-FEELGNVK 278
Query: 344 IIVFTTNYKERLDPALLRPGRMDMHIHM 371
II+ TN + LDPAL+RPGR+D I +
Sbjct: 279 IIM-ATNRPDVLDPALVRPGRLDRKIEI 305
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 55/173 (31%), Positives = 80/173 (46%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TFD +A KQ ++ ++ F+K+ E ++ VG +G LL GPPGTGK+ L A+A
Sbjct: 225 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGE 283
Query: 265 --LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGY 316
+ F + +M I+ +++ID GGG
Sbjct: 284 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGN 343
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
DE TL+ LL +DG + G I+V TN + LD ALLRPGR D +
Sbjct: 344 DEREQ--TLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLRPGRFDRQV 392
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 59/184 (32%), Positives = 82/184 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 163 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 222
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 223 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTL--- 276
Query: 342 ERI-IVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIE 399
R+ ++ TN + LDPALLRPGR+D IH+ IL + I H D E
Sbjct: 277 HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID-YE 335
Query: 400 ELIK 403
++K
Sbjct: 336 AIVK 339
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 59/184 (32%), Positives = 82/184 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 171 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 230
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 231 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTL--- 284
Query: 342 ERI-IVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIE 399
R+ ++ TN + LDPALLRPGR+D IH+ IL + I H D E
Sbjct: 285 HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID-YE 343
Query: 400 ELIK 403
++K
Sbjct: 344 AIVK 347
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 59/184 (32%), Positives = 82/184 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 171 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 230
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 231 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTL--- 284
Query: 342 ERI-IVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIE 399
R+ ++ TN + LDPALLRPGR+D IH+ IL + I H D E
Sbjct: 285 HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID-YE 343
Query: 400 ELIK 403
++K
Sbjct: 344 AIVK 347
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 59/184 (32%), Positives = 82/184 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 171 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 230
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 231 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTL--- 284
Query: 342 ERI-IVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIE 399
R+ ++ TN + LDPALLRPGR+D IH+ IL + I H D E
Sbjct: 285 HRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEID-YE 343
Query: 400 ELIK 403
++K
Sbjct: 344 AIVK 347
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 56/175 (32%), Positives = 88/175 (50%)
Query: 204 STFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA 262
ST+D + + +K+ + + ++ VK E + +G A +G +LYGPPGTGK+ L A+A
Sbjct: 145 STYDMVGGLTKQIKE-IKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 203
Query: 263 NYL--KF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGG 314
++ KF ++ SI+ +++ID SI R G
Sbjct: 204 HHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIG-STRVEGS 261
Query: 315 GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
G ++ Q T+ LLN +DG +S + I+ TN + LDPALLRPGR+D I
Sbjct: 262 GGGDSEVQRTMLELLNQLDGFETSKNIK--IIMATNRLDILDPALLRPGRIDRKI 314
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 168 (64.2 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 61/194 (31%), Positives = 90/194 (46%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TF +A K+ L + ++ F++ + + ++G +G LL GPPGTGK+ L A+A
Sbjct: 155 TFHDVAGIDEAKEELAEIVE-FLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGE 213
Query: 265 LKFDIY-----DMEXXXXXXXXXXXXXXVSTGNRS---ILVIEDIDCSIELENRQCGGGY 316
K + D G ++ ++ I++ID GGG
Sbjct: 214 AKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGGN 273
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTP 376
DE TL+ LL +DG ++ G II+ TN + LDPALLRPGR D I +S
Sbjct: 274 DEREQ--TLNQLLVEMDGFEANEGV--IIIAATNRPDVLDPALLRPGRFDRQITISIPDI 329
Query: 377 GGF-KILAFNYLKI 389
G KIL + KI
Sbjct: 330 AGRQKILEVHLKKI 343
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 164 (62.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 59/184 (32%), Positives = 82/184 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 217 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTL--- 270
Query: 342 ERI-IVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIE 399
R+ ++ TN + LDPALLRPGR+D IH+ IL + I H D E
Sbjct: 271 HRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHSGPITKHGDID-YE 329
Query: 400 ELIK 403
++K
Sbjct: 330 AIVK 333
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 51/147 (34%), Positives = 74/147 (50%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E+Y +G +G +LYGPPGTGK+ L A+AN +L+ ++
Sbjct: 207 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 266
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID +I + G E Q T+ LLN +DG + S GD
Sbjct: 267 ELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 323
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 324 KVIM-ATNRIETLDPALIRPGRIDRKI 349
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 51/147 (34%), Positives = 74/147 (50%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E+Y +G +G +LYGPPGTGK+ L A+AN +L+ ++
Sbjct: 208 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 267
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID +I + G E Q T+ LLN +DG + S GD
Sbjct: 268 ELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 324
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 325 KVIM-ATNRIETLDPALIRPGRIDRKI 350
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 51/147 (34%), Positives = 74/147 (50%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E+Y +G +G +LYGPPGTGK+ L A+AN +L+ ++
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID +I + G E Q T+ LLN +DG + S GD
Sbjct: 269 ELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 325
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 326 KVIM-ATNRIETLDPALIRPGRIDRKI 351
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 51/147 (34%), Positives = 74/147 (50%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E+Y +G +G +LYGPPGTGK+ L A+AN +L+ ++
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID +I + G E Q T+ LLN +DG + S GD
Sbjct: 269 ELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 325
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 326 KVIM-ATNRIETLDPALIRPGRIDRKI 351
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 51/147 (34%), Positives = 74/147 (50%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E+Y +G +G +LYGPPGTGK+ L A+AN +L+ ++
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID +I + G E Q T+ LLN +DG + S GD
Sbjct: 269 ELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 325
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 326 KVIM-ATNRIETLDPALIRPGRIDRKI 351
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 51/147 (34%), Positives = 74/147 (50%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E+Y +G +G +LYGPPGTGK+ L A+AN +L+ ++
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID +I + G E Q T+ LLN +DG + S GD
Sbjct: 269 ELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 325
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 326 KVIM-ATNRIETLDPALIRPGRIDRKI 351
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 51/147 (34%), Positives = 74/147 (50%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E+Y +G +G +LYGPPGTGK+ L A+AN +L+ ++
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID +I + G E Q T+ LLN +DG + S GD
Sbjct: 269 ELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 325
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 326 KVIM-ATNRIETLDPALIRPGRIDRKI 351
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 51/147 (34%), Positives = 74/147 (50%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E+Y +G +G +LYGPPGTGK+ L A+AN +L+ ++
Sbjct: 209 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID +I + G E Q T+ LLN +DG + S GD
Sbjct: 269 ELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 325
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 326 KVIM-ATNRIETLDPALIRPGRIDRKI 351
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 164 (62.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 59/187 (31%), Positives = 85/187 (45%)
Query: 227 VKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXX 278
+K E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 157 LKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAIVDKYIGESA 216
Query: 279 XXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWS 337
I+ +++ID + R+ G + Q TL LLN +DG +
Sbjct: 217 RLIREMFGYAKEHEPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQLDG-FD 272
Query: 338 SCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTP-GGFKILAFNYLKIKSHSMFD 396
G +II+ TN + LDPALLR GR+D I + G +IL + ++ D
Sbjct: 273 YLGKTKIIM-ATNRPDTLDPALLRAGRLDRKIEIPLPNEVGRLEILKIHSSTVQMEGDID 331
Query: 397 EIEELIK 403
E ++K
Sbjct: 332 -FESVVK 337
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 164 (62.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 60/186 (32%), Positives = 84/186 (45%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 163 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIR 222
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG + + G
Sbjct: 223 EMFNYAREHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQLDG-FDNLGK 278
Query: 342 ERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIEE 400
++I+ TN + LDPALLRPGR+D I + IL + I H D E
Sbjct: 279 VKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEID-YEA 336
Query: 401 LIKEVE 406
++K E
Sbjct: 337 IVKLAE 342
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 164 (62.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 59/186 (31%), Positives = 84/186 (45%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 164 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIR 223
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG + G
Sbjct: 224 EMFGYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQLDG-FDELGK 279
Query: 342 ERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIEE 400
++I+ TN + LDPALLRPGR+D I + ++L + I H D E
Sbjct: 280 VKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEID-YEA 337
Query: 401 LIKEVE 406
++K E
Sbjct: 338 VVKLAE 343
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 53/162 (32%), Positives = 75/162 (46%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LKF------ 267
KQ L++ ++ F+K ++ +G +G LL GPPGTGK+ L A A + F
Sbjct: 170 KQELVEVVE-FLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGS 228
Query: 268 DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSG 327
D +M ++ I++ID GGG+DE TL+
Sbjct: 229 DFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQ--TLNQ 286
Query: 328 LLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
LL +DG S + II+ TN + LDPALLRPGR D I
Sbjct: 287 LLVEMDGF--SANEGIIIIAATNRADILDPALLRPGRFDRQI 326
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 164 (62.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 50/147 (34%), Positives = 74/147 (50%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E+Y +G +G +LYGPPGTGK+ L A+AN +L+ ++
Sbjct: 208 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 267
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID ++ + G E Q T+ LLN +DG + S GD
Sbjct: 268 ELFRVAEEHAPSIVFIDEID-AVGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 324
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 325 KVIM-ATNRIETLDPALIRPGRIDRKI 350
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 166 (63.5 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 58/174 (33%), Positives = 77/174 (44%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TFD +A K+ + +L F++ + R+G G LL GPPGTGK+ L A+A
Sbjct: 154 TFDDVAGVDEAKEE-VKELVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGE 212
Query: 265 LKF--------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGY 316
K D +M I+ I++ID GGG+
Sbjct: 213 AKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHRGAGLGGGH 272
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFT-TNYKERLDPALLRPGRMDMHI 369
DE TL+ LL +DG G E IIV TN + LDPALLRPGR D +
Sbjct: 273 DEREQ--TLNQLLVEMDGFE---GKEGIIVMAATNRPDVLDPALLRPGRFDRQV 321
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 162 (62.1 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 59/183 (32%), Positives = 83/183 (45%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 163 ELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIR 222
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG + G
Sbjct: 223 EMFNYAREHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQLDG-FDQLGK 278
Query: 342 ERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIEE 400
++I+ TN + LDPALLRPGR+D I + +IL + I H D E
Sbjct: 279 VKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEID-YEA 336
Query: 401 LIK 403
++K
Sbjct: 337 IVK 339
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 165 (63.1 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 55/192 (28%), Positives = 96/192 (50%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFD-- 268
KQ + + ++ + + Y ++G RG LLYGPPGTGK+ L+ A+AN +++ +
Sbjct: 175 KQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGS 234
Query: 269 IYDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDENNSQVTLSG 327
+ + ++ N +I+ I++ID +I + G D ++ L
Sbjct: 235 EFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEID-AIATKRFDAQTGADREVQRILLE- 292
Query: 328 LLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYL 387
LLN +DG + + ++I+ TN + LDPALLRPGR+D I L + L F+ +
Sbjct: 293 LLNQMDG-FEQTSNVKVIM-ATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTI 350
Query: 388 KIKSHSMFDEIE 399
K S+ E++
Sbjct: 351 ASKM-SLSPEVD 361
Score = 38 (18.4 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 164 KVLNKYLPYVAERSKAIKETKKVIK 188
K L ++L Y+ + + IK+ ++ +K
Sbjct: 46 KKLQRHLEYIKLQEEYIKDEQRSLK 70
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 161 (61.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 56/176 (31%), Positives = 79/176 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
E + RVG +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 161 ELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIR 220
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
++ +++ID + R+ G + Q TL LLN +DG + +
Sbjct: 221 EMFGYARDHQPCVIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDG-FDTLSK 276
Query: 342 ERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFD 396
+II+ TN + LDPALLRPGR+D I + G +L + I H D
Sbjct: 277 VKIIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVD 331
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 162 (62.1 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 50/149 (33%), Positives = 72/149 (48%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E Y +G +G +LYGPPGTGK+ L A+AN +L+ ++
Sbjct: 217 ELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVR 276
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID GG E Q T+ LLN +DG + S GD
Sbjct: 277 EMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGG--EREIQRTMLELLNQLDG-FDSRGDV 333
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHIHM 371
++I+ TN + LDPAL+RPGR+D I +
Sbjct: 334 KVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 162 (62.1 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 50/149 (33%), Positives = 72/149 (48%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E Y +G +G +LYGPPGTGK+ L A+AN +L+ ++
Sbjct: 217 ELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVR 276
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID GG E Q T+ LLN +DG + S GD
Sbjct: 277 EMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGG--EREIQRTMLELLNQLDG-FDSRGDV 333
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHIHM 371
++I+ TN + LDPAL+RPGR+D I +
Sbjct: 334 KVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 170 (64.9 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 68/229 (29%), Positives = 102/229 (44%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TFD A +K+ L ++ R +K E + G +G LL+GPPGTGK+ L A+A
Sbjct: 314 TFDDFAGQEYIKREL-QEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 372
Query: 265 --LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDC-SIELENRQCGGG 315
L F D +M + SI+ I++ID + GGG
Sbjct: 373 AGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPDIGGG 432
Query: 316 YDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLT 375
E L +L +DG + + +++ TN + LDPALLR GR D I + +
Sbjct: 433 GAEREQG--LLQILTEMDG-FKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPS 489
Query: 376 PGGFKILAFNYLKIKSHSMFDEIEELIKEVEVTPAEEFMKSEDADVALN 424
G + + + K DE EEL++EV E+F +E +V LN
Sbjct: 490 KDGRLAILKVHARNKFFRSEDEKEELLQEVAEN-TEDFTGAELQNV-LN 536
Score = 41 (19.5 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 39/170 (22%), Positives = 67/170 (39%)
Query: 13 TFAASAMLVRTILNEVQTITNQFIPQKLQDILSS---KLEGLFGKFSDQLTLIIEQSEGF 69
TF S+ L T ++ +N P + + LSS + + K S + L + G
Sbjct: 2 TFYISSSLTPTHFSKPLNPSNTLFPSQFRGSLSSFVRRRKPTEAKLSSKFNLFPSRRNGL 61
Query: 70 SVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFE---GMQLTWE 126
+ + ST + S ++ S EK L T E ++ E +QL +
Sbjct: 62 IT---CCSTSSFESTESSVSQEEDAESNRLFEK-LRETERERLSNMEELERKANVQLERQ 117
Query: 127 LVTTEN-QKTSLDYDSGLYASETAHKSFH-LSFSKLFK--DKVLNKYLPY 172
LV + +T L L +E ++ H ++FS K D +Y+ Y
Sbjct: 118 LVMASDWSRTLLTMRGKLKGTEWDPETSHRINFSDFMKLLDSNSVQYMEY 167
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 161 (61.7 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXX 275
KQ + + ++ + + + Y ++G RG LLYGPPGTGK+ L+ A+AN K +
Sbjct: 181 KQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGS 240
Query: 276 XXXXXXXXXX-------XXVSTGNR-SILVIEDIDCSIELENRQCGGGYDENNSQVTLSG 327
++ N SI+ I+++D SI + G D ++ +
Sbjct: 241 EFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVD-SIATKRFDAQTGSDREVQRILIE- 298
Query: 328 LLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYL 387
LL +DG S + ++ TN + LDPALLRPGR+D I L + L F +
Sbjct: 299 LLTQMDGFDQSTNVK--VIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFGTI 356
Query: 388 KIK 390
K
Sbjct: 357 ASK 359
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 169 (64.5 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 55/173 (31%), Positives = 80/173 (46%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TFD +A KQ ++ ++ F+K+ E ++ VG +G LL GPPGTGK+ L A+A
Sbjct: 218 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 276
Query: 265 --LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGY 316
+ F + +M I+ +++ID GGG
Sbjct: 277 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGN 336
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
DE TL+ LL +DG + G I+V TN + LD ALLRPGR D +
Sbjct: 337 DEREQ--TLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLRPGRFDRQV 385
Score = 39 (18.8 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 366 DMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEELIKEVEVTPAEEF 413
D+ + L+ ++I A + ++ +M D+I E++ E E +EF
Sbjct: 610 DIDTAVKTLSDKAYEI-ALSQIRNNREAM-DKIVEILLEKETMSGDEF 655
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 160 (61.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 56/208 (26%), Positives = 97/208 (46%)
Query: 201 DHPS-TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIA 259
+ PS ++ + + KQ + + ++ + Y ++G RG LLYGPPGTGK+ L
Sbjct: 143 EKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAK 202
Query: 260 AMANYLKFDI-------YDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQ 311
A+A++ + + ++ N +I+ I++ID +I +
Sbjct: 203 AVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEID-AIATKRFD 261
Query: 312 CGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHM 371
G D ++ + LLN +DG S + ++ TN ++ LDPALLRPGR+D I
Sbjct: 262 AQTGADREVQRILME-LLNQMDGFDVSVNVK--VIMATNRQDTLDPALLRPGRLDRKIEF 318
Query: 372 SYLTPGGFKILAFNYLKIKSHSMFDEIE 399
L K L F + K + + DE++
Sbjct: 319 P-LPDRRQKRLIFQVITSKMN-LSDEVD 344
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + + ++ VK E + +G A +G
Sbjct: 130 KVDPLVSLMMVEKVP---DSTYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKG 185
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + V SI
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 245
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI + G G D + Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 246 IFMDEID-SIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 301
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
D ALLRPGR+D I P + + LKI S M
Sbjct: 302 DSALLRPGRIDRKIEF----PPPNEEARLDILKIHSRKM 336
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + + ++ VK E + +G A +G
Sbjct: 130 KVDPLVSLMMVEKVP---DSTYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKG 185
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + V SI
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 245
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI + G G D + Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 246 IFMDEID-SIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 301
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
D ALLRPGR+D I P + + LKI S M
Sbjct: 302 DSALLRPGRIDRKIEF----PPPNEEARLDILKIHSRKM 336
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + + ++ VK E + +G A +G
Sbjct: 130 KVDPLVSLMMVEKVP---DSTYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKG 185
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + V SI
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 245
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI + G G D + Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 246 IFMDEID-SIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 301
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
D ALLRPGR+D I P + + LKI S M
Sbjct: 302 DSALLRPGRIDRKIEF----PPPNEEARLDILKIHSRKM 336
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + + ++ VK E + +G A +G
Sbjct: 130 KVDPLVSLMMVEKVP---DSTYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKG 185
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + V SI
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 245
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI + G G D + Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 246 IFMDEID-SIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 301
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
D ALLRPGR+D I P + + LKI S M
Sbjct: 302 DSALLRPGRIDRKIEF----PPPNEEARLDILKIHSRKM 336
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + + ++ VK E + +G A +G
Sbjct: 130 KVDPLVSLMMVEKVP---DSTYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKG 185
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + V SI
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 245
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI + G G D + Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 246 IFMDEID-SIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 301
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
D ALLRPGR+D I P + + LKI S M
Sbjct: 302 DSALLRPGRIDRKIEF----PPPNEEARLDILKIHSRKM 336
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + + ++ VK E + +G A +G
Sbjct: 130 KVDPLVSLMMVEKVP---DSTYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKG 185
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + V SI
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 245
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI + G G D + Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 246 IFMDEID-SIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 301
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
D ALLRPGR+D I P + + LKI S M
Sbjct: 302 DSALLRPGRIDRKIEF----PPPNEEARLDILKIHSRKM 336
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + + ++ VK E + +G A +G
Sbjct: 130 KVDPLVSLMMVEKVP---DSTYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKG 185
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + V SI
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 245
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI + G G D + Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 246 IFMDEID-SIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 301
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
D ALLRPGR+D I P + + LKI S M
Sbjct: 302 DSALLRPGRIDRKIEF----PPPNEEARLDILKIHSRKM 336
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + + ++ VK E + +G A +G
Sbjct: 136 KVDPLVSLMMVEKVP---DSTYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKG 191
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + V SI
Sbjct: 192 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 251
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI + G G D + Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 252 IFMDEID-SIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 307
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
D ALLRPGR+D I P + + LKI S M
Sbjct: 308 DSALLRPGRIDRKIEF----PPPNEEARLDILKIHSRKM 342
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + + ++ VK E + +G A +G
Sbjct: 138 KVDPLVSLMMVEKVP---DSTYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKG 193
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + V SI
Sbjct: 194 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 253
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI + G G D + Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 254 IFMDEID-SIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 309
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
D ALLRPGR+D I P + + LKI S M
Sbjct: 310 DSALLRPGRIDRKIEF----PPPNEEARLDILKIHSRKM 344
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + + ++ VK E + +G A +G
Sbjct: 138 KVDPLVSLMMVEKVP---DSTYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKG 193
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + V SI
Sbjct: 194 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 253
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI + G G D + Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 254 IFMDEID-SIGSSRLEGGSGGD-SEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 309
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
D ALLRPGR+D I P + + LKI S M
Sbjct: 310 DSALLRPGRIDRKIEF----PPPNEEARLDILKIHSRKM 344
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 50/150 (33%), Positives = 74/150 (49%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXX 282
+ + RVG + +G LLYGPPGTGK+ L A+A N+LK I D
Sbjct: 166 DIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIR 225
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGLWSSCGD 341
I+ +++ID + R+ G + Q TL LLN +DG + + G
Sbjct: 226 EMFAYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDG-FDALGQ 281
Query: 342 ERIIVFTTNYKERLDPALLRPGRMDMHIHM 371
++I+ TN + LDPALLRPGR+D + +
Sbjct: 282 VKMIM-ATNRPDTLDPALLRPGRLDRKLEI 310
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 54/194 (27%), Positives = 89/194 (45%)
Query: 214 VLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDI---- 269
+ KQ + + ++ + E Y ++G RG LLYGPPGTGK+ L A+AN+
Sbjct: 162 IQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVV 221
Query: 270 ---YDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDENNSQVTL 325
+ + ++ N +I+ I+++D +I G D ++ +
Sbjct: 222 GSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVD-AIATARFDAQTGADREVQRILM 280
Query: 326 SGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFN 385
LLN +DG + + ++ TN + LDPALLRPGR+D I L K L F
Sbjct: 281 E-LLNQMDGFDQTVNVK--VIMATNRADTLDPALLRPGRLDRKIEFP-LPDRRQKRLVFQ 336
Query: 386 YLKIKSHSMFDEIE 399
K + + DE++
Sbjct: 337 VCTSKMN-LSDEVD 349
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 53/176 (30%), Positives = 79/176 (44%)
Query: 204 STF-DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA 262
+TF D D ++ + +L +++ + ++G +G L+ GPPGTGK+ L A+A
Sbjct: 149 TTFADVAGCDEAKEE--VAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIA 206
Query: 263 NYLKF--------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGG 314
K D +M I+ I++ID GG
Sbjct: 207 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGG 266
Query: 315 GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFT-TNYKERLDPALLRPGRMDMHI 369
G+DE TL+ +L +DG G+E IIV TN + LDPALLRPGR D +
Sbjct: 267 GHDEREQ--TLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGRFDRQV 317
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 55/191 (28%), Positives = 85/191 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDI-------YDMEXXXXXXXXXX 283
E Y ++G G L+YGPPGTGK+ L+ A+AN + + +
Sbjct: 162 ELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVR 221
Query: 284 XXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
++ N SI+ I+++D +I + G D ++ L LLN +DG S +
Sbjct: 222 DVFRLARENSPSIIFIDEVD-AIATKRFDAQTGADREVQRILLE-LLNQMDGFDKSTNVK 279
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFD-EIEEL 401
++ TN + LDPALLRPGR+D I L K L F + K + D IE
Sbjct: 280 --VIMATNRADTLDPALLRPGRLDRKIEFP-LPDRKQKRLIFQTIISKMNVSSDVNIESF 336
Query: 402 IKEVEVTPAEE 412
+ + A +
Sbjct: 337 VVRTDKISAAD 347
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 55/191 (28%), Positives = 85/191 (44%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDI-------YDMEXXXXXXXXXX 283
E Y ++G G L+YGPPGTGK+ L+ A+AN + + +
Sbjct: 162 ELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVR 221
Query: 284 XXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
++ N SI+ I+++D +I + G D ++ L LLN +DG S +
Sbjct: 222 DVFRLARENSPSIIFIDEVD-AIATKRFDAQTGADREVQRILLE-LLNQMDGFDKSTNVK 279
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFD-EIEEL 401
++ TN + LDPALLRPGR+D I L K L F + K + D IE
Sbjct: 280 --VIMATNRADTLDPALLRPGRLDRKIEFP-LPDRKQKRLIFQTIISKMNVSSDVNIESF 336
Query: 402 IKEVEVTPAEE 412
+ + A +
Sbjct: 337 VVRTDKISAAD 347
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 50/147 (34%), Positives = 73/147 (49%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E+Y +G +G +LYG PGTGK+ L A+AN +L+ ++
Sbjct: 209 EYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID +I + G E Q T+ LLN +DG + S GD
Sbjct: 269 ELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 325
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 326 KVIM-ATNRIETLDPALIRPGRIDRKI 351
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 50/147 (34%), Positives = 73/147 (49%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E+Y +G +G +LYG PGTGK+ L A+AN +L+ ++
Sbjct: 209 EYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 268
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
SI+ I++ID +I + G E Q T+ LLN +DG + S GD
Sbjct: 269 ELFRVAEEHAPSIVFIDEID-AIGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 325
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 326 KVIM-ATNRIETLDPALIRPGRIDRKI 351
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 160 (61.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 55/175 (31%), Positives = 83/175 (47%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAMAN 263
D +D K+ L + +D F++ ++R+G RG LL GPPGTGK+ L +A AN
Sbjct: 268 DVQGVDEA-KEELEEIVD-FLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEAN 325
Query: 264 ----YLKFDIYD-MEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDE 318
++ +D M SI+ I+++D + N + D
Sbjct: 326 VPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRNAR-----DA 380
Query: 319 NNSQVTLSGLLNFVDGLWSSCGDERIIVF--TTNYKERLDPALLRPGRMDMHIHM 371
+ + TL+ LL +DG + +VF TN+ E LDPAL RPGR D HIH+
Sbjct: 381 AHMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHV 435
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 62/219 (28%), Positives = 105/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + + ++ VK E + +G A +G
Sbjct: 125 KVDPLVSLMMVEKVP---DSTYEMIGGLDKQIKE-IKEVIELPVKHPEHFEALGIAQPKG 180
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + V SI
Sbjct: 181 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 240
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID + +R GG ++ Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 241 IFMDEID---SIGSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 295
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
D ALLRPGR+D I P + + LKI S M
Sbjct: 296 DSALLRPGRIDRKIEF----PPPNEEARLDILKIHSRKM 330
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 159 (61.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 53/172 (30%), Positives = 78/172 (45%)
Query: 206 FDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY- 264
FD +A K+ L ++ F+K+ E ++ VG +G LL GPPGTGK+ L A+A
Sbjct: 171 FDDVAGIDEAKEEL-QEVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEA 229
Query: 265 -LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYD 317
+ F + +M ++ I++ID GGG D
Sbjct: 230 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGND 289
Query: 318 ENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
E TL+ LL +DG + G II+ TN + LD AL+RPGR D +
Sbjct: 290 EREQ--TLNQLLTEMDGFEGNTGI--IIIAATNRPDVLDSALMRPGRFDRQV 337
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 156 (60.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 63/219 (28%), Positives = 104/219 (47%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + + ++ VK E + +G A +G
Sbjct: 140 KVDPLVSLMMVEKVP---DSTYEMVGGLDKQIKE-IKEVIELPVKHPELFDALGIAQPKG 195
Query: 244 YLLYGPPGTGKSSLIAAMANYLKFDIYDM------EXXXXXXXXXXXXXXVSTGNR--SI 295
LL+GPPGTGK+ L A+A++ + + + V SI
Sbjct: 196 VLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 255
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI +R G ++ Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 256 IFMDEID-SIG-SSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDIL 311
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
DPALLRPGR+D I P + + LKI S M
Sbjct: 312 DPALLRPGRIDRKIEF----PAPDEKARADILKIHSRKM 346
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 160 (61.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 59/206 (28%), Positives = 97/206 (47%)
Query: 225 RFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDIYDMEXXXXXX 279
+F++ Y ++G RG +L GPPGTGK+ L A A +L +
Sbjct: 304 KFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGV 363
Query: 280 XXXXXXXXVSTGNR---SILVIEDIDC-SIELENRQCGGGYDENNSQVTLSGLLNFVDGL 335
T +I+ +++ID E N + GG + N TL+ LL +DG
Sbjct: 364 GASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGRMGGNDEREN---TLNQLLVEMDGF 420
Query: 336 WSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFK-ILAFNYLKIKSHSM 394
++ D +++ TN + LD ALLRPGR D HI + G K I + K+K S+
Sbjct: 421 DTT--DHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKLKSV 478
Query: 395 FDEIEELIKEVEVTPAEEFMKSEDAD 420
D I+ K+V+ + ++ +K+E+ +
Sbjct: 479 QD-IDAKQKDVDFSKYQQ-LKNEEIE 502
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 160 (61.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 59/206 (28%), Positives = 97/206 (47%)
Query: 225 RFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDIYDMEXXXXXX 279
+F++ Y ++G RG +L GPPGTGK+ L A A +L +
Sbjct: 304 KFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGV 363
Query: 280 XXXXXXXXVSTGNR---SILVIEDIDC-SIELENRQCGGGYDENNSQVTLSGLLNFVDGL 335
T +I+ +++ID E N + GG + N TL+ LL +DG
Sbjct: 364 GASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNGRMGGNDEREN---TLNQLLVEMDGF 420
Query: 336 WSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFK-ILAFNYLKIKSHSM 394
++ D +++ TN + LD ALLRPGR D HI + G K I + K+K S+
Sbjct: 421 DTT--DHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKLKLKSV 478
Query: 395 FDEIEELIKEVEVTPAEEFMKSEDAD 420
D I+ K+V+ + ++ +K+E+ +
Sbjct: 479 QD-IDAKQKDVDFSKYQQ-LKNEEIE 502
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 50/147 (34%), Positives = 77/147 (52%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM--EXXXXXXXXXX 283
E+Y +G +G +LYG PGTGK+ L A+AN +L+ ++ +
Sbjct: 212 EYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVR 271
Query: 284 XXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
V+ N SI+ I++ID ++ + G E Q T+ LLN +DG + S GD
Sbjct: 272 ELFRVAEENAPSIVFIDEID-AVGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDSRGDV 328
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++++ TN E LDPAL+RPGR+D I
Sbjct: 329 KVLM-ATNRIESLDPALIRPGRIDRKI 354
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 160 (61.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 57/191 (29%), Positives = 89/191 (46%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY-- 264
D MD K +++ + F+K E + ++G RG +L GPPGTGK+ L A A
Sbjct: 403 DVAGMDEA-KVEIMEFVS-FLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGESG 460
Query: 265 LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELEN-RQCGGGYD 317
+ F + +M I+ I++ID + + + GG D
Sbjct: 461 VPFFSVSGSEFVEMFVGVGPSRVRDLFANARKNTPCIIFIDEIDAIGKSRSAKNFSGGND 520
Query: 318 ENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPG 377
E S TL+ +L +DG +S D+ +++ TN + LD AL+RPGR D HI + T
Sbjct: 521 ERES--TLNQILTEMDGFNTS--DQVVVLAGTNRPDVLDKALMRPGRFDRHISIDRPTMD 576
Query: 378 GFKILAFNYLK 388
G K + +LK
Sbjct: 577 GRKQIFRVHLK 587
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 155 (59.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 71/278 (25%), Positives = 121/278 (43%)
Query: 136 SLDYDSGLYASETAHKSFHLSFSKLFKDKVLNKYLPYVA--ERSKAIKETKKVIKLYSLC 193
++D ++G+ S T + S + D+ L K VA + S A+ + S+
Sbjct: 90 AVDQNTGIVGSTTGSNYYVRILSTI--DRELLKPSASVALHKHSNALVDVLPPEADSSIS 147
Query: 194 AADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTG 253
S D MD + KQ + + ++ + E Y ++G RG L+YGPPG G
Sbjct: 148 MLQPDEKPDVSYADIGGMD-MQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCG 206
Query: 254 KSSLIAAMANYLKFDI-------YDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSI 305
K+ L A+A++ + + ++ N +I+ I++ID +I
Sbjct: 207 KTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AI 265
Query: 306 ELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRM 365
+ G D ++ L LLN +DG + + ++ TN + LDPALLRPGR+
Sbjct: 266 ATKRFDAQTGADREVQRILLE-LLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRL 322
Query: 366 DMHIHMSYLTPGGFKILAFNYLKIKSHSMFD-EIEELI 402
D I L K L F+ + K + D ++EE +
Sbjct: 323 DRKIEFP-LPDRRQKRLVFSTITSKMNLSEDVDLEEFV 359
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 158 (60.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 53/175 (30%), Positives = 80/175 (45%)
Query: 204 STFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
+TF +A K+ + + +D +++ + ++G G L+ GPPGTGK+ L A+A
Sbjct: 153 TTFSDVAGCDEAKEDVKELVD-YLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAG 211
Query: 264 YLKF--------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGG 315
K D +M + I+ I++ID GGG
Sbjct: 212 EAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGG 271
Query: 316 YDENNSQVTLSGLLNFVDGLWSSCGDERIIVFT-TNYKERLDPALLRPGRMDMHI 369
+DE TL+ +L +DG G+E IIV TN + LDPALLRPGR D +
Sbjct: 272 HDEREQ--TLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGRFDRQV 321
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 158 (60.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 53/175 (30%), Positives = 80/175 (45%)
Query: 204 STFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
+TF +A K+ + + +D +++ + ++G G L+ GPPGTGK+ L A+A
Sbjct: 153 TTFSDVAGCDEAKEDVKELVD-YLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAG 211
Query: 264 YLKF--------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGG 315
K D +M + I+ I++ID GGG
Sbjct: 212 EAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGG 271
Query: 316 YDENNSQVTLSGLLNFVDGLWSSCGDERIIVFT-TNYKERLDPALLRPGRMDMHI 369
+DE TL+ +L +DG G+E IIV TN + LDPALLRPGR D +
Sbjct: 272 HDEREQ--TLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGRFDRQV 321
>UNIPROTKB|H7C492 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 GO:GO:0005524
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7C492 Ensembl:ENST00000426649 Uniprot:H7C492
Length = 201
Score = 142 (55.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 30/82 (36%), Positives = 53/82 (64%)
Query: 293 RSILVIEDIDCSIELENRQCGGGYD-ENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNY 351
+S++++ED+D + + + ++T SGLLN +DG+ S+ + RI+ TTN+
Sbjct: 58 QSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNH 115
Query: 352 KERLDPALLRPGRMDMHIHMSY 373
+RLDPAL+RPGR+D+ ++ Y
Sbjct: 116 VDRLDPALIRPGRVDLKEYVGY 137
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 155 (59.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 64/223 (28%), Positives = 103/223 (46%)
Query: 197 AINLDHPSTFDTLAMDPVLKQA--LIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGK 254
A+ +D T D + + KQ L++ + + +E + ++G +G LLYGPPGTGK
Sbjct: 159 AMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGK 218
Query: 255 SSLI---AAMAN--YLKF---DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDC-SI 305
+ + AA N +LK + M I+ I++ID
Sbjct: 219 TLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGT 278
Query: 306 ELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERI-IVFTTNYKERLDPALLRPGR 364
+ + + G + Q T+ LLN +DG +SS DERI ++ TN + LDPAL+R GR
Sbjct: 279 KRFDSEVSG---DREVQRTMLELLNQLDG-FSS--DERIKVIAATNRADILDPALMRSGR 332
Query: 365 MDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIEELIKEVE 406
+D I + T +IL + K+ H + EEL + +
Sbjct: 333 LDRKIEFPHPTEEARARILQIHSRKMNVHPDVN-FEELARSTD 374
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 154 (59.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 52/176 (29%), Positives = 86/176 (48%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN--- 263
D +D V KQ + + ++ + + + Y ++G RG LLYGPPGTGK+ L+ A+AN
Sbjct: 135 DVGGLD-VQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTA 193
Query: 264 --YLKF--DIYDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDE 318
+++ + + ++ N +I+ I++ID +I + G D
Sbjct: 194 ANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEID-AIATKRFDAQTGADR 252
Query: 319 NNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHM-SY 373
++ + LL +DG G ++ TN + LDPALLRPGR+D I SY
Sbjct: 253 EVQRILIE-LLTQMDGF--DQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSY 305
>UNIPROTKB|C9J1S9 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 GO:GO:0005739
GO:GO:0005524 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
IPI:IPI00927724 ProteinModelPortal:C9J1S9 SMR:C9J1S9 STRING:C9J1S9
Ensembl:ENST00000443791 ArrayExpress:C9J1S9 Bgee:C9J1S9
Uniprot:C9J1S9
Length = 150
Score = 132 (51.5 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 41/120 (34%), Positives = 61/120 (50%)
Query: 155 LSFSKLFKD-KVLNKYLPYVAERSKAIKETKKVIKLYSLCAADAINLDHPSTFDTLAMDP 213
++F+ L D KV L E + +E K V +Y+ ++ +P L
Sbjct: 15 VTFTALGTDRKVFFNILEEARELALQQEEGKTV--MYTAVGSEWRPFGYPRRRRPLN-SV 71
Query: 214 VLKQALID----DLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDI 269
VL+Q L D D+ F+ ++Y+ G ++RGYLLYGPPG GKSS I A+A L+ I
Sbjct: 72 VLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSI 131
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 157 (60.3 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 50/147 (34%), Positives = 73/147 (49%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E Y +G +G +LYG PGTGK+ L A+AN +L+ ++
Sbjct: 212 ELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVR 271
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
+ SI+ I++ID ++ + G E Q T+ LLN +DG + S GD
Sbjct: 272 ELFRVADDLSPSIVFIDEID-AVGTKRYDANSG-GEREIQRTMLELLNQLDG-FDSRGDV 328
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPALLRPGR+D I
Sbjct: 329 KVIL-ATNRIESLDPALLRPGRIDRKI 354
Score = 38 (18.4 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 82 LSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQL 123
L + P + ++V +AP E + E Q + + E ++L
Sbjct: 166 LQDEVDPMVSVMKVEKAPLESYADIGGLEAQ-IQEIKEAVEL 206
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 157 (60.3 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 53/177 (29%), Positives = 84/177 (47%)
Query: 205 TFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
T+D + ++ LK A+ + ++ +K+ E + G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLNSQLK-AIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 264 ----YLKF----DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGG 315
Y+ +I + + SI+ I+++D R+ G
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--KRE--GA 465
Query: 316 YDENNSQVTLSGLLNFVDGLWSSCGDERIIVF-TTNYKERLDPALLRPGRMDMHIHM 371
E +V S LL +DG+ S + R++V TN + LD AL RPGR D I +
Sbjct: 466 QSEVEKRVVAS-LLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 157 (60.3 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 49/165 (29%), Positives = 79/165 (47%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXX 275
KQ +++ + +F++ E Y ++G RG +L GPPGTGK+ L A A Y +
Sbjct: 382 KQEVMEFV-KFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYSVSGS 440
Query: 276 XXXXXXXXXXXX-----VSTGNR---SILVIEDIDCSIELENR-QCGGGYDENNSQVTLS 326
T SI+ +++ID + ++ G DE + TL+
Sbjct: 441 EFVEMFVGVGASRVRDLFKTARENAPSIVFVDEIDAIGKQRSKGNATGANDER--ETTLN 498
Query: 327 GLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHM 371
LL +DG +S D +++ TN + LD AL+RPGR D H+H+
Sbjct: 499 QLLVEMDGFDTS--DHVVVLAGTNRPDILDRALMRPGRFDRHVHI 541
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 157 (60.3 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 53/177 (29%), Positives = 84/177 (47%)
Query: 205 TFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
T+D + ++ LK A+ + ++ +K+ E + G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLNSQLK-AIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 264 ----YLKF----DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGG 315
Y+ +I + + SI+ I+++D R+ G
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--KRE--GA 465
Query: 316 YDENNSQVTLSGLLNFVDGLWSSCGDERIIVF-TTNYKERLDPALLRPGRMDMHIHM 371
E +V S LL +DG+ S + R++V TN + LD AL RPGR D I +
Sbjct: 466 QSEVEKRVVAS-LLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 60/251 (23%), Positives = 112/251 (44%)
Query: 197 AINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSS 256
AI++ + S D ++ + K L ++ +K + ++R+G +G LLYGPPG K+
Sbjct: 618 AIDVPNVSWSDIGGLENI-KLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTM 676
Query: 257 LIAAMANY--LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELE 308
+ A+AN L F ++ + SI+ +++D
Sbjct: 677 IAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVER 736
Query: 309 NRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMH 368
G G N + L+ LL +DG+ + ++ TN +R+D AL+RPGR+D
Sbjct: 737 GSSSGAG---NVADRVLAQLLTEMDGI-EQLKNVTVLA-ATNRPDRIDKALMRPGRIDRI 791
Query: 369 IHMSYLTPGGFKILAFNYLKIKSHSMFDEIE--ELIKEVEVTPAEEFMK--SEDADVAL- 423
I++ L + N L+ S + +E++ EL+ + + E + E A +AL
Sbjct: 792 IYVP-LPDAATRREILN-LQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALE 849
Query: 424 -NGLVDFLLRK 433
N D ++++
Sbjct: 850 ENIKADCIMKR 860
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 152 (58.6 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 54/198 (27%), Positives = 93/198 (46%)
Query: 214 VLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDI---- 269
+ KQ + + ++ + + Y ++G RG LL+GPPG GK+ L A+A++
Sbjct: 159 IQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVV 218
Query: 270 ---YDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDENNSQVTL 325
+ + ++ N SI+ I++ID +I + G D ++ L
Sbjct: 219 GSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEID-AIATKRFDAQTGADREVQRILL 277
Query: 326 SGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFN 385
LLN +DG + + ++ TN + LDPALLRPGR+D I + L K L F
Sbjct: 278 E-LLNQMDGFDETTNIK--VIMATNRADTLDPALLRPGRLDRKIELP-LPDRRQKRLVFT 333
Query: 386 YLKIKSHSMFD-EIEELI 402
+ K + D ++E++I
Sbjct: 334 TITSKMNVGEDVDLEDII 351
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 152 (58.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 60/209 (28%), Positives = 93/209 (44%)
Query: 227 VKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDIYDMEXXXXXXXX 281
+K E + +VG +G LLYGPPGTGK+ L A+A +++ ++
Sbjct: 190 LKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGA 249
Query: 282 XXXXXXVSTGNR---SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSS 338
SI+ I++ID GG + Q TL LL +DG + +
Sbjct: 250 SLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGG--DREVQRTLMQLLAEMDG-FDA 306
Query: 339 CGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDE 397
GD +II TN + LDPA+LRPGR D I + G +IL + K+ +
Sbjct: 307 RGDVKIIG-ATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVN- 364
Query: 398 IEELIKEVEVTPAEEFMKSEDADVALNGL 426
+EE+ K E E +K+ + +N +
Sbjct: 365 LEEIAKMTEGCVGAE-LKAICTEAGMNAI 392
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 152 (58.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 51/147 (34%), Positives = 75/147 (51%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM--EXXXXXXXXXX 283
E Y +G +G +LYG PGTGK+ L A+AN +L+ ++ +
Sbjct: 206 ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCR 265
Query: 284 XXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
V+ N SI+ I++ID +I + G E Q T+ LLN +DG + GD
Sbjct: 266 QIFKVAGENAPSIVFIDEID-AIGTKRYDSNSG-GEREIQRTMLELLNQLDG-FDDRGDV 322
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 323 KVIM-ATNKIETLDPALIRPGRIDRKI 348
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 152 (58.6 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 49/147 (33%), Positives = 70/147 (47%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E Y +G +G +LYG PGTGK+ L A+AN +L+ ++
Sbjct: 228 ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVR 287
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
+ SI+ I++ID GG E Q T+ LLN +DG + GD
Sbjct: 288 QIFQVAAEHAPSIVFIDEIDAIGTKRYDSTSGG--EREIQRTMLELLNQLDG-FDDRGDV 344
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 345 KVIM-ATNKIETLDPALIRPGRIDRKI 370
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 152 (58.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 49/147 (33%), Positives = 70/147 (47%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E Y +G +G +LYG PGTGK+ L A+AN +L+ ++
Sbjct: 210 ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCR 269
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
+ SI+ I++ID GG E Q T+ LLN +DG + GD
Sbjct: 270 QIFQIAADHAPSIVFIDEIDAIGTKRYESTSGG--EREIQRTMLELLNQLDG-FDDRGDI 326
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 327 KVIM-ATNKIESLDPALIRPGRIDRKI 352
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 155 (59.6 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 51/148 (34%), Positives = 73/148 (49%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E Y +G +G +LYG PGTGK+ L A+AN +L+ ++
Sbjct: 212 ELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVR 271
Query: 283 XXXXXVSTGNRSILVIEDIDC-SIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGD 341
+ SI+ I++ID + + GG E Q T+ LLN +DG + S GD
Sbjct: 272 ELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGG---EREIQRTMLELLNQLDG-FDSRGD 327
Query: 342 ERIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPALLRPGR+D I
Sbjct: 328 VKVIL-ATNRIESLDPALLRPGRIDRKI 354
Score = 38 (18.4 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 82 LSTRITPSIQQLRVSQAPREKSLSVTINEGQKVVDTFEGMQL 123
L + P + ++V +AP E + E Q + + E ++L
Sbjct: 166 LQDEVDPMVSVMKVEKAPLESYADIGGLEAQ-IQEIKEAVEL 206
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 49/166 (29%), Positives = 80/166 (48%)
Query: 215 LKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF-- 267
LK+ LI+ + ++ + + +G + +G LLYGPPG K+ A+A N+L
Sbjct: 507 LKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKG 566
Query: 268 -DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLS 326
+I++ + SI+ ++ID + + G S V L+
Sbjct: 567 PEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDA---IAGDRDGDSSTTAASNV-LT 622
Query: 327 GLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
LLN +DG+ G +IV TN +DPALLRPGR+D HI+++
Sbjct: 623 SLLNEIDGVEELKGV--VIVGATNKPTEIDPALLRPGRLDRHIYVA 666
Score = 120 (47.3 bits), Expect = 0.00068, P = 0.00068
Identities = 51/184 (27%), Positives = 77/184 (41%)
Query: 199 NLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLI 258
NL T+D + + L ++ + +S G + RG LL+GPPGTGK+ L+
Sbjct: 221 NLPQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLL 280
Query: 259 AAMANYLKF---------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELEN 309
+AN + I SI+ +++ID SI
Sbjct: 281 RCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEID-SIAPSR 339
Query: 310 RQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE-RIIVF-TTNYKERLDPALLRPGRMDM 367
G E S+V ++ LL +DG+ GD RI+V TN +D AL RPGR D
Sbjct: 340 TSDDSG--ETESRV-VAQLLTVMDGM----GDNGRIVVIGATNRPNSIDSALRRPGRFDQ 392
Query: 368 HIHM 371
+ +
Sbjct: 393 EVEI 396
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 98/406 (24%), Positives = 164/406 (40%)
Query: 3 STSSVLSTYTTFAASAMLVRTILNEVQTITNQFIPQKLQDILSSKLEGLFGKFSDQLTLI 62
+TSS LS T+A + +L+ ++ N + +Q++ +L + G + D +
Sbjct: 102 NTSS-LSNIRTYATAR---EKVLSNADSLPND---ENIQEMAYKELIEM-GDY-DTIVKR 152
Query: 63 IEQSEGFSVNEI---YQAAELYLSTRITPSIQQLRVSQAPRE-KSLSVTINEGQKVVDTF 118
E S FS NE Y L S +I + L +++ P K ++ E +
Sbjct: 153 FE-SLAFSSNEECVRYYFKALVYSGKINKA--NLGMTKLPPPTKKMTKAAREALGSEEAM 209
Query: 119 EGMQLTWELVTTENQKTSLDYDSGLY---ASETAHKSFHLSFSKLFKDKVLNKYLPY-VA 174
+G L + N+K ++ A+ + S+ F L VL +L Y +
Sbjct: 210 KGFFLRFNHFPEVNEKIHQKPVVPVFNINANSKTNLSWFDRFVSLLWLPVL-LFLVYSLT 268
Query: 175 ERSKAIKETKKVIKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYS 234
+ +KE Y D N P++FD + +K+ L + +D + + Y+
Sbjct: 269 SETSTVKEANGNKPQYFAKEYDETN-QTPTSFDDVKGIQEVKEELEEIVDYLLHPTK-YN 326
Query: 235 RVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTGNRS 294
+G +G LL G PGTGK+ L A+A V G+R
Sbjct: 327 SIGAKLPKGVLLSGEPGTGKTLLARAIAGEAGVSFL------YTTGSSFDEKYVGVGSRR 380
Query: 295 ILVI-----EDIDCSIELENRQC-GGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFT 348
+ + E C I ++ G + + TL LL +DG + + +I+
Sbjct: 381 VRELFNAAREKQPCIIFIDEIDAVGKSRNTAHHNETLLQLLTEMDGFEGN--SQIMIIGA 438
Query: 349 TNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
TN LDPALLRPGR D HI + G + +YLK H++
Sbjct: 439 TNAPNSLDPALLRPGRFDRHISVPIPDMKGRSEIIDHYLKKVKHTV 484
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 47/162 (29%), Positives = 77/162 (47%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF--- 267
KQ + + ++ + E Y ++G RG L+YGPPG GK+ L A+A ++++
Sbjct: 170 KQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGS 229
Query: 268 DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSG 327
+ + SI+ I++ID +I + G D ++ L
Sbjct: 230 EFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEID-AIATKRFDAQTGADREVQRILLE- 287
Query: 328 LLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
LLN +DG S + ++ TN ++ LDPALLRPGR+D I
Sbjct: 288 LLNQMDGFDQSTNVK--VIMATNRQDTLDPALLRPGRLDRKI 327
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 66/227 (29%), Positives = 105/227 (46%)
Query: 179 AIKET--KKVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSR 235
AI E KV L SL + + ST++ + +D +K+ + + ++ VK E +
Sbjct: 148 AIHEVLPSKVDPLVSLMMVEKVP---DSTYEMVGGLDTQIKE-IKEVIELPVKHPELFDA 203
Query: 236 VGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDM------EXXXXXXXXXXXXXXVS 289
+G A +G LLYGPPGTGK+ L A+A++ + + + V
Sbjct: 204 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVM 263
Query: 290 TGNR--SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVF 347
SI+ +++ID SI +R G ++ Q T+ LLN +DG ++ + ++
Sbjct: 264 AREHAPSIIFMDEID-SIG-SSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIK--VIM 319
Query: 348 TTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
TN + LD ALLRPGR+D I P + LKI S M
Sbjct: 320 ATNRIDILDSALLRPGRIDRKIEF----PAPDEKARAQILKIHSRKM 362
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 54/194 (27%), Positives = 97/194 (50%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + ++ VK E + +G + +G
Sbjct: 160 KVDPLVSLMKVEKVP---DSTYEMVGGLDQQVKEVK-EVIELPVKHPEIFESLGISQPKG 215
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + V SI
Sbjct: 216 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 275
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID + +++ G + ++ Q T+ LLN +DG S+ + ++ TN + L
Sbjct: 276 IFMDEID---SIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIK--VIMCTNRIDIL 330
Query: 356 DPALLRPGRMDMHI 369
D ALLRPGR+D I
Sbjct: 331 DEALLRPGRIDRKI 344
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 54/194 (27%), Positives = 97/194 (50%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D +K+ + ++ VK E + +G + +G
Sbjct: 160 KVDPLVSLMKVEKVP---DSTYEMVGGLDQQVKEVK-EVIELPVKHPEIFESLGISQPKG 215
Query: 244 YLLYGPPGTGKSSLIAAMAN-----YLKFDIYDM-EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A+ +++ ++ + V SI
Sbjct: 216 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 275
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID + +++ G + ++ Q T+ LLN +DG S+ + ++ TN + L
Sbjct: 276 IFMDEID---SIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIK--VIMCTNRIDIL 330
Query: 356 DPALLRPGRMDMHI 369
D ALLRPGR+D I
Sbjct: 331 DEALLRPGRIDRKI 344
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/183 (30%), Positives = 84/183 (45%)
Query: 201 DH-PS-TFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL 257
DH P T+D + + LK + + ++ +KR E + G + RG LLYGPPGTGK+ +
Sbjct: 310 DHGPQVTYDMIGGLSSQLK-TIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLI 368
Query: 258 IAAMANYLKF--------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELEN 309
A+AN + +I S SI+ I+++D
Sbjct: 369 AKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCP--K 426
Query: 310 RQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVF-TTNYKERLDPALLRPGRMDMH 368
R+ G +E +V S LL +DG+ S + +++V TN LD AL RPGR D
Sbjct: 427 RE--GAQNEVEKRVVAS-LLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKE 483
Query: 369 IHM 371
I +
Sbjct: 484 IEI 486
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 157 (60.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 57/194 (29%), Positives = 94/194 (48%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 263
+F +A KQ +++ + F+K Y+++G RG +L GPPGTGK+ L A A
Sbjct: 286 SFKNVAGCDEAKQEIMEFV-HFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGE 344
Query: 264 ----YLKF---DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCG--G 314
+L + +M + SI+ I++ID +I E + G G
Sbjct: 345 ANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEID-AIGKERGKGGALG 403
Query: 315 GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYL 374
G ++ + TL+ LL +DG +S D+ +++ TN + LD AL+RPGR D HI +
Sbjct: 404 GANDER-EATLNQLLVEMDGFTTS--DQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSP 460
Query: 375 TPGGFKILAFNYLK 388
G + + +LK
Sbjct: 461 DVNGRQQIYLVHLK 474
Score = 41 (19.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 141 SGLYASETAHKS-----FHLSFSKLFKDK 164
SGL T H+S FH+S+++L +++
Sbjct: 47 SGLATRNTIHRSTQIRSFHISWTRLNENR 75
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 153 (58.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 52/177 (29%), Positives = 83/177 (46%)
Query: 205 TFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
T+D + + LK A+ + ++ +K+ E + G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLSSQLK-AIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 264 ----YLKF----DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGG 315
Y+ +I + + SI+ I+++D R+ G
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCP--KRE--GA 465
Query: 316 YDENNSQVTLSGLLNFVDGLWSSCGDERIIVF-TTNYKERLDPALLRPGRMDMHIHM 371
+E +V S LL +DG+ S + +++V TN LD AL RPGR D I +
Sbjct: 466 QNEVEKRVVAS-LLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521
Score = 134 (52.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 60/230 (26%), Positives = 102/230 (44%)
Query: 197 AINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSS 256
AI++ + S D ++ + K L ++ +K E + R+G +G LLYGPPG K+
Sbjct: 618 AIDVPNVSWSDIGGLESI-KLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTM 676
Query: 257 LIAAMANY--LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELE 308
+ A+AN L F ++ + SI+ +++D
Sbjct: 677 IAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVER 736
Query: 309 NRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMH 368
G G N + L+ LL +DG+ D I+ TN +R+D AL+RPGR+D
Sbjct: 737 GSSLGAG---NVADRVLAQLLTEMDGI-EQLKDVTILA-ATNRPDRIDKALMRPGRIDRI 791
Query: 369 IHMSYLTPGGFKILAFNYLKIKSHSM--FDEIE--ELIKEVEVTPAEEFM 414
I++ L + F K++ HSM +E++ ELI + + E +
Sbjct: 792 IYVP-LPDAATRREIF---KLQFHSMPVSNEVDLDELILQTDAYSGAEIV 837
>ZFIN|ZDB-GENE-040426-2331 [details] [associations]
symbol:spast "spastin" species:7955 "Danio rerio"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISS] [GO:0048675 "axon extension"
evidence=IGI;IMP] [GO:0031122 "cytoplasmic microtubule
organization" evidence=IMP] [GO:0015630 "microtubule cytoskeleton"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0051013 "microtubule severing"
evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IMP]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0007416 "synapse assembly"
evidence=IMP] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2331 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0043066 GO:GO:0051301 GO:GO:0051260
GO:GO:0005815 GO:GO:0007049 Pfam:PF04212 GO:GO:0045773 HSSP:Q01853
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0031122
GO:GO:0021955 GO:GO:0043014 GO:GO:0048676 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 GO:GO:0031117
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AY304504 EMBL:CU651563 EMBL:BC067715
IPI:IPI00497843 RefSeq:NP_998080.1 UniGene:Dr.30307
ProteinModelPortal:Q6NW58 SMR:Q6NW58 STRING:Q6NW58
Ensembl:ENSDART00000035150 GeneID:405851 KEGG:dre:405851
NextBio:20817813 Bgee:Q6NW58 Uniprot:Q6NW58
Length = 570
Score = 150 (57.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 59/197 (29%), Positives = 93/197 (47%)
Query: 175 ERSKAIKETKKV-IKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFY 233
+R + +K K V KL SL + ++ FD +A + KQAL + + R E +
Sbjct: 262 QRKRDMKNFKNVDSKLASLILNEIVDSGSVVRFDDIAGQDLAKQALQEIVILPALRPELF 321
Query: 234 SRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXVSTG-- 291
+ + +A RG LL+GPPG GK+ L A+A +++ +
Sbjct: 322 TGL-RAPARGLLLFGPPGNGKTMLAKAVAMESNATFFNISAATLTSKYVGEGEKLVRALF 380
Query: 292 ------NRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERII 345
SI+ I++ID S+ E R+ G +D + T L+ F DG+ S GDER++
Sbjct: 381 AVARELQPSIIFIDEID-SLLCERRE--GEHDASRRLKT-EFLIEF-DGVQSG-GDERVL 434
Query: 346 VF-TTNYKERLDPALLR 361
V TN + LD A+LR
Sbjct: 435 VMGATNRPQELDEAVLR 451
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 62/223 (27%), Positives = 105/223 (47%)
Query: 197 AINLDHPSTFDTLAMDPVLKQA--LIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGK 254
A+ +D T D + + KQ L++ + + +E + ++G +G LLYGPPGTGK
Sbjct: 158 AMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGK 217
Query: 255 SSLI---AAMAN--YLKF---DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDC-SI 305
+ + AA N +LK + M + I+ I++ID
Sbjct: 218 TLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGT 277
Query: 306 ELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERI-IVFTTNYKERLDPALLRPGR 364
+ + + G + Q T+ LLN +DG +SS D+RI ++ TN + LDPAL+R GR
Sbjct: 278 KRFDSEVSG---DREVQRTMLELLNQLDG-FSS--DDRIKVIAATNRADILDPALMRSGR 331
Query: 365 MDMHIHMSYLTPGGF-KILAFNYLKIKSHSMFDEIEELIKEVE 406
+D I + T +IL + K+ ++ + EEL + +
Sbjct: 332 LDRKIEFPHPTEEARGRILQIHSRKMNVNADVN-FEELARSTD 373
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 152 (58.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 65/250 (26%), Positives = 108/250 (43%)
Query: 168 KYLPYVAERSKAIKETK-KVIKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRF 226
KYL + + ++IK ++K L N+ + S D +D + K+ L ++
Sbjct: 535 KYLIEIEDFRESIKNNPASILKGEHLVE----NISNVSWDDIGGLDDI-KEELRQAIEWP 589
Query: 227 VKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXX----XXX 282
+E + + G + +G +LYGPPG K++L+ A+A+ K +
Sbjct: 590 NLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPYLGDSE 649
Query: 283 XXXXXVSTGNR----SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSS 338
+ R SIL ++ID + N D S+V LS LN +DG+
Sbjct: 650 QTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRV-LSTFLNEMDGVEQL 708
Query: 339 CGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEI 398
G I++ TN + +D ALLRPGR D + + P L +K KS + D +
Sbjct: 709 NGV--IVIGATNRLDMIDNALLRPGRFDKILEIKL--PDQLSRLKILKIKTKSIPLSDNV 764
Query: 399 EELIKEVEVT 408
LI+ +T
Sbjct: 765 N-LIEISNLT 773
>TIGR_CMR|DET_1513 [details] [associations]
symbol:DET_1513 "ATPase, AAA family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0019538 "protein metabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0465 GO:GO:0017111 RefSeq:YP_182211.1
ProteinModelPortal:Q3Z6D8 STRING:Q3Z6D8 GeneID:3229236
KEGG:det:DET1513 PATRIC:21610046 HOGENOM:HOG000133135 OMA:REGMNSP
ProtClustDB:CLSK741621 BioCyc:DETH243164:GJNF-1514-MONOMER
Uniprot:Q3Z6D8
Length = 431
Score = 148 (57.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 52/171 (30%), Positives = 85/171 (49%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
++D++ ++ +K + + +F+K+++ SR+G + KRG LL G PGTGK+ + A+ +
Sbjct: 172 SWDSIILEESVKDDIYLNSVQFLKQQDRLSRLGISKKRGLLLAGEPGTGKTIVCKALMSG 231
Query: 265 LK------FDIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDE 318
K D Y + +S SI+ IED+D G DE
Sbjct: 232 AKDITCITTDCYQLREAWYVDELYEIARELSP---SIVFIEDLDL--------IGKSRDE 280
Query: 319 --NNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLR-PGRMD 366
N + LS LL +DGL ++ G + + TTN+ + LD AL+R P R D
Sbjct: 281 YGNEAATPLSALLAALDGLETNLGV--VTIATTNFLDSLDNALIRRPSRFD 329
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 151 (58.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 52/173 (30%), Positives = 78/173 (45%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TF +A K L + +D F+K + Y+ +G +G LL GPPGTGK+ L A+A
Sbjct: 248 TFGDVAGADQAKLELQEVVD-FLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 306
Query: 265 LKFDIYD------MEXXXXXXXXXXXXXXVSTGNRS--ILVIEDIDCSIELENRQCGGGY 316
+ +E +++ I+ I++ID GGG
Sbjct: 307 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGN 366
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
DE T++ LL +DG + G I++ TN + LD ALLRPGR D +
Sbjct: 367 DEREQ--TINQLLTEMDGFSGNSGV--IVLAATNRPDVLDSALLRPGRFDRQV 415
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 147 (56.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 62/219 (28%), Positives = 101/219 (46%)
Query: 185 KVIKLYSLCAADAINLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRG 243
KV L SL + + ST++ + +D + Q + + ++ VK E + +G +G
Sbjct: 124 KVDPLVSLMLVEKVP---DSTYEMVGGLDKQI-QEIKEVIELPVKHPELFDALGITQPKG 179
Query: 244 YLLYGPPGTGKSSLIAAMANYLKFDIYDM------EXXXXXXXXXXXXXXVSTGNR--SI 295
LLYGPPGTGK+ L A+A++ + + + V SI
Sbjct: 180 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 239
Query: 296 LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERL 355
+ +++ID SI + G G ++ Q T+ LLN +DG ++ + ++ TN + L
Sbjct: 240 IFMDEID-SIGSARLETGTG--DSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDVL 294
Query: 356 DPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSM 394
D ALLRPGR+D I P + + LKI S M
Sbjct: 295 DQALLRPGRIDRKIEF----PPPNEEARLDILKIHSRKM 329
Score = 41 (19.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 19/89 (21%), Positives = 41/89 (46%)
Query: 103 SLSVTINEGQKVVDTFEGMQLTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFK 162
S V I EG + ++ +++ EL T N++ L + +L L +
Sbjct: 2 SKDVGIPEGSEGFHSYYTQKIS-ELQFTVNER-----QKNLLRLQAQRNELNLKVRLLRE 55
Query: 163 D-KVLNKYLPYVAERSKAIKETKKVIKLY 190
+ ++L + Y+AE K + + K ++K++
Sbjct: 56 ELQLLQEQGSYIAEVVKPMDKNKVLVKVH 84
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 151 (58.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 51/177 (28%), Positives = 85/177 (48%)
Query: 205 TFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
T+D + ++ LK+ + + ++ +K+ E + G + RG LLYGPPGTGK+ + A+AN
Sbjct: 345 TYDMIGGLNSQLKE-IREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVAN 403
Query: 264 ----YLKF----DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGG 315
Y+ +I + + SI+ I+++D R+ G
Sbjct: 404 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--KRE--GA 459
Query: 316 YDENNSQVTLSGLLNFVDGLWSSCGDERIIVF-TTNYKERLDPALLRPGRMDMHIHM 371
+E +V S LL +DG+ S + +++V TN LD AL RPGR D I +
Sbjct: 460 QNEVEKRVVAS-LLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 515
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 150 (57.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 52/175 (29%), Positives = 78/175 (44%)
Query: 204 STFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
+TF +A K+ + + +D +++ + ++G G LL G PGTGK+ L A+A
Sbjct: 151 TTFADVAGCDEAKEDVAELVD-YLREPSRFQKLGGRIPSGILLVGQPGTGKTLLAKAIAG 209
Query: 264 YLKF--------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGG 315
K D +M I+ I++ID GGG
Sbjct: 210 EAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGMGGG 269
Query: 316 YDENNSQVTLSGLLNFVDGLWSSCGDERIIVFT-TNYKERLDPALLRPGRMDMHI 369
+DE TL+ +L +DG G+E +IV TN + LDPALLRPGR D +
Sbjct: 270 HDEREQ--TLNQMLVEMDGFE---GNEGVIVIAATNRPDVLDPALLRPGRFDRQV 319
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 55/201 (27%), Positives = 94/201 (46%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK 266
D MD + KQ + + ++ + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 165 DIGGMD-IQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 223
Query: 267 FDI-------YDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDE 318
+ + ++ N +I+ I++ID +I + G D
Sbjct: 224 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTGADR 282
Query: 319 NNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG 378
++ L LLN +DG + + ++ TN + LDPALLRPGR+D I L
Sbjct: 283 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFP-LPDRR 338
Query: 379 FKILAFNYLKIKSHSMFDEIE 399
K L F+ + K + + +E++
Sbjct: 339 QKRLIFSTITSKMN-LSEEVD 358
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 55/201 (27%), Positives = 94/201 (46%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK 266
D MD + KQ + + ++ + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMD-IQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 267 FDI-------YDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDE 318
+ + ++ N +I+ I++ID +I + G D
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTGADR 283
Query: 319 NNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG 378
++ L LLN +DG + + ++ TN + LDPALLRPGR+D I L
Sbjct: 284 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFP-LPDRR 339
Query: 379 FKILAFNYLKIKSHSMFDEIE 399
K L F+ + K + + +E++
Sbjct: 340 QKRLIFSTITSKMN-LSEEVD 359
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 55/201 (27%), Positives = 94/201 (46%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK 266
D MD + KQ + + ++ + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMD-IQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 267 FDI-------YDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDE 318
+ + ++ N +I+ I++ID +I + G D
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTGADR 283
Query: 319 NNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG 378
++ L LLN +DG + + ++ TN + LDPALLRPGR+D I L
Sbjct: 284 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFP-LPDRR 339
Query: 379 FKILAFNYLKIKSHSMFDEIE 399
K L F+ + K + + +E++
Sbjct: 340 QKRLIFSTITSKMN-LSEEVD 359
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 55/201 (27%), Positives = 94/201 (46%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK 266
D MD + KQ + + ++ + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMD-IQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 267 FDI-------YDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDE 318
+ + ++ N +I+ I++ID +I + G D
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTGADR 283
Query: 319 NNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG 378
++ L LLN +DG + + ++ TN + LDPALLRPGR+D I L
Sbjct: 284 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFP-LPDRR 339
Query: 379 FKILAFNYLKIKSHSMFDEIE 399
K L F+ + K + + +E++
Sbjct: 340 QKRLIFSTITSKMN-LSEEVD 359
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 55/201 (27%), Positives = 94/201 (46%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK 266
D MD + KQ + + ++ + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMD-IQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 267 FDI-------YDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDE 318
+ + ++ N +I+ I++ID +I + G D
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTGADR 283
Query: 319 NNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG 378
++ L LLN +DG + + ++ TN + LDPALLRPGR+D I L
Sbjct: 284 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFP-LPDRR 339
Query: 379 FKILAFNYLKIKSHSMFDEIE 399
K L F+ + K + + +E++
Sbjct: 340 QKRLIFSTITSKMN-LSEEVD 359
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 55/201 (27%), Positives = 94/201 (46%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK 266
D MD + KQ + + ++ + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMD-IQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 267 FDI-------YDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDE 318
+ + ++ N +I+ I++ID +I + G D
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTGADR 283
Query: 319 NNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG 378
++ L LLN +DG + + ++ TN + LDPALLRPGR+D I L
Sbjct: 284 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFP-LPDRR 339
Query: 379 FKILAFNYLKIKSHSMFDEIE 399
K L F+ + K + + +E++
Sbjct: 340 QKRLIFSTITSKMN-LSEEVD 359
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 55/201 (27%), Positives = 94/201 (46%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK 266
D MD + KQ + + ++ + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMD-IQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 267 FDI-------YDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDE 318
+ + ++ N +I+ I++ID +I + G D
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTGADR 283
Query: 319 NNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG 378
++ L LLN +DG + + ++ TN + LDPALLRPGR+D I L
Sbjct: 284 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKIEFP-LPDRR 339
Query: 379 FKILAFNYLKIKSHSMFDEIE 399
K L F+ + K + + +E++
Sbjct: 340 QKRLIFSTITSKMN-LSEEVD 359
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 147 (56.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 49/148 (33%), Positives = 72/148 (48%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E Y +G +G +LYG PGTGK+ L A+AN +L+ ++
Sbjct: 208 ELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVR 267
Query: 283 XXXXXVSTGNRSILVIEDIDC-SIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGD 341
SI+ I++ID + + Q GG E Q T+ LLN +DG + + D
Sbjct: 268 ELFRVADECAPSIVFIDEIDAVGTKRYDSQSGG---EREIQRTMLELLNQLDG-FDARTD 323
Query: 342 ERIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ TN E LDPAL+RPGR+D I
Sbjct: 324 VKVIM-ATNRIETLDPALIRPGRIDRKI 350
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 150 (57.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 50/180 (27%), Positives = 86/180 (47%)
Query: 199 NLDHPSTF-DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL 257
++D + F D +D +A ++++ +++ + ++R+G +G LL GPPGTGK+ L
Sbjct: 219 SMDSSTKFSDVKGVDEA--KAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTML 276
Query: 258 IAAMANYLKFDIY-----DMEXXXXXXXXXXXXXXVSTGNRS---ILVIEDIDCSIELEN 309
A+A + + E S + I+ I++ID N
Sbjct: 277 ARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRN 336
Query: 310 RQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
+ D+ ++TL+ +L +DG + G I+V TN+ E LD AL+RPGR D HI
Sbjct: 337 PK-----DQQYMKMTLNQMLVELDGFKQNEGI--IVVAATNFPESLDKALVRPGRFDRHI 389
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 150 (57.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 76/319 (23%), Positives = 134/319 (42%)
Query: 123 LTWELVTTENQKTSLDYDSGLYASETAHKSFHLSFSKLFKD---KVLNKYLPYVAERSK- 178
LT + + + LD ++ Y + H + L ++ K + + L A K
Sbjct: 423 LTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKF 482
Query: 179 AIKETKKVIKLYSL----CAADAINLDHPSTF-DTLAMDPVLKQALIDDLDRFVKRREFY 233
++K T K ++ + A I L+ P + + LK + + + ++ E +
Sbjct: 483 SLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETF 542
Query: 234 SRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXXXXX 285
+R+G + +G LLYGPPG K+ A+A N+L +I++
Sbjct: 543 ARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIF 602
Query: 286 XXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERII 345
+ SI+ ++ID L + G N L+ LLN +DG+ G +I
Sbjct: 603 RKARSAAPSIIFFDEIDA---LSPDRDGSSTSAANH--VLTSLLNEIDGVEELKGV--VI 655
Query: 346 VFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG-FKILAFNYLKIKSHSMFDEIEELIKE 404
V TN + +D ALLRPGR+D HI++ +IL K + ++ EL
Sbjct: 656 VAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADR 715
Query: 405 VE-VTPAEEFMKSEDADVA 422
E + AE + ++A +A
Sbjct: 716 TEGYSGAEVVLLCQEAGLA 734
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 53/203 (26%), Positives = 91/203 (44%)
Query: 199 NLDHPSTFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL 257
NL P ++ + +D + ++L ++ + + +S G + RG LL+GPPGTGK+ L
Sbjct: 237 NLPEPLSYAAVGGLDKEI-ESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTML 295
Query: 258 IAAMANYLKFDIYDMEXXXXXXX----XXXXXXXVSTGNR----SILVIEDIDCSIELEN 309
+ +AN + + + R SI+ I++ID SI
Sbjct: 296 LRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEID-SIAPNR 354
Query: 310 RQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
G E S+V + LL +DG+ + G + +++ TN +DPAL RPGR D +
Sbjct: 355 ANDDSG--EVESRVVAT-LLTLMDGM-GAAG-KVVVIAATNRPNSVDPALRRPGRFDQEV 409
Query: 370 HMSYL-TPGGFKILAFNYLKIKS 391
+ F IL + ++ S
Sbjct: 410 EIGIPDVDARFDILTKQFSRMSS 432
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 150 (57.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 54/201 (26%), Positives = 100/201 (49%)
Query: 215 LKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF-- 267
+KQ L + ++ + E +SR+G +G LLYGPPG K+ A+A N++
Sbjct: 556 VKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKG 615
Query: 268 -DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLS 326
+++D + S++ ++ID NR G ++N+S ++
Sbjct: 616 PELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTA--NR---G--EDNSSDRVVA 668
Query: 327 GLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNY 386
LLN +DG+ + +++ TN + +DPAL+RPGR+D + Y+ P F+
Sbjct: 669 ALLNELDGIEAL--RNVLVLAATNRPDMIDPALMRPGRLD---RLLYVGPPNFEARK-QI 722
Query: 387 LKIKSHSM-F-DEIE-ELIKE 404
+KI++ M F ++++ +LI E
Sbjct: 723 VKIQAEKMKFAEDVDLDLIAE 743
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 146 (56.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 47/147 (31%), Positives = 71/147 (48%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E Y +G +G +LYG PGTGK+ L A+AN +L+ ++
Sbjct: 215 ELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVR 274
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
+ SI+ I++ID +I + G E Q T+ LLN +DG +S D
Sbjct: 275 QLFNAAEEHSPSIVFIDEID-AIGTKRYDAQSGA-EREIQRTMLELLNQLDGFDTSQRDI 332
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHI 369
++I+ T + LDPAL+RPGR+D I
Sbjct: 333 KVIMATNRISD-LDPALIRPGRIDRKI 358
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 150 (57.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 52/177 (29%), Positives = 83/177 (46%)
Query: 205 TFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
T+D + + LK A+ + ++ +K+ E + G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLSSQLK-AIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 409
Query: 264 ----YLKF----DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGG 315
Y+ +I + + SI+ I+++D R+ G
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--KRE--GA 465
Query: 316 YDENNSQVTLSGLLNFVDGLWSSCGDERIIVF-TTNYKERLDPALLRPGRMDMHIHM 371
+E +V S LL +DG+ S + +++V TN LD AL RPGR D I +
Sbjct: 466 QNEVEKRVVAS-LLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521
Score = 133 (51.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 65/244 (26%), Positives = 113/244 (46%)
Query: 140 DSGLYA-SETAHKSFHLSFSKLFK-DKV-LNKYLPYVAE-RSKAIKETKKVIKLYSLCAA 195
++GLYA +K +LS SK+ K+ LN +L + + R A++E
Sbjct: 570 EAGLYALRRVLNKQPNLSDSKMAGLVKITLNDFLQGMNDIRPSAMREV------------ 617
Query: 196 DAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKS 255
AI++ + S D ++ + K L ++ +K E + R+G +G LLYGPPG K+
Sbjct: 618 -AIDVPNVSWSDIGGLENI-KLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKT 675
Query: 256 SLIAAMANY--LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIEL 307
+ A+AN L F ++ + + SI+ +++D ++ +
Sbjct: 676 MIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFDELD-ALAI 734
Query: 308 ENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDM 367
E G N + L+ LL +DG+ D I+ TN +R+D AL+RPGR+D
Sbjct: 735 ERGSSSGA--GNVADRVLAQLLTEMDGI-EQLKDVTILA-ATNRPDRIDKALMRPGRIDR 790
Query: 368 HIHM 371
I++
Sbjct: 791 IIYV 794
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 149 (57.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 51/177 (28%), Positives = 84/177 (47%)
Query: 205 TFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
T+D + ++ LK+ + + ++ +K+ E + G RG LLYGPPGTGK+ + A+AN
Sbjct: 342 TYDMIGGLNSQLKE-IREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 400
Query: 264 ----YLKF----DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGG 315
Y+ +I + + SI+ I+++D R+ G
Sbjct: 401 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--KRE--GA 456
Query: 316 YDENNSQVTLSGLLNFVDGLWSSCGDERIIVF-TTNYKERLDPALLRPGRMDMHIHM 371
+E +V S LL +DG+ S + +++V TN LD AL RPGR D I +
Sbjct: 457 QNEVEKRVVAS-LLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 512
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 147 (56.8 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 59/201 (29%), Positives = 91/201 (45%)
Query: 205 TFDTL-AMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
TFD + MD + ++++ ++K E YSR+G +G LL GPPGTGK+ L A+A
Sbjct: 246 TFDDVRGMDEAKLE--VEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAG 303
Query: 264 YLKFDIYDMEXXXXXXXXXXXXXXVSTGNRSILVIED-----IDCSIELENRQCGGGYDE 318
+ + V G R + + D C I ++ G
Sbjct: 304 EAQVPFFH------TAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKRV 357
Query: 319 NNS-----QVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSY 373
+NS T++ LL+ +DG + G I++ TN + LD ALLRPGR D+ + +
Sbjct: 358 SNSIHPYANQTINQLLSEMDGFTRNEGI--IVIAATNRVDDLDKALLRPGRFDVRVTVPK 415
Query: 374 LTPGGFKILAFN-YLKIKSHS 393
G ++ FN YL HS
Sbjct: 416 PDLAG-RVDIFNFYLSKIVHS 435
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 147 (56.8 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 53/192 (27%), Positives = 89/192 (46%)
Query: 226 FVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDM------EXXXXXX 279
++K + Y ++G +G LL GPPG GK+ L A+A + M E
Sbjct: 318 YLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGLG 377
Query: 280 XXXXXXXXVSTGNRS--ILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWS 337
R+ I+ I++ID ++ + G+ + TL+ LL +DG+ +
Sbjct: 378 AARVRSLFKEARARAPCIVYIDEID-AVGKKRSTNMSGFSNTEEEQTLNQLLVEMDGMGT 436
Query: 338 SCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDE 397
+ D I++ +TN + LD AL+RPGR+D HI + T K + +LKI + +
Sbjct: 437 T--DHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTLQERKEIFEQHLKILKLTQPAD 494
Query: 398 IEELIKEVEVTP 409
L + E+TP
Sbjct: 495 FYSL-RLAELTP 505
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 142 (55.0 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 56/200 (28%), Positives = 94/200 (47%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL- 265
D +MD + KQ + + ++ + E Y ++G RG L+YGPPG GK+ L +A+++
Sbjct: 115 DIGSMD-IQKQEVWEAMELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVAHHMI 173
Query: 266 -KF-DIYDMEXXXXXXXXXXXXX----XVSTGNR-SILVIEDIDCSIELENRQCGGGYDE 318
F + E + N +I+ I++ID +I + G D
Sbjct: 174 AAFIHVVGSEFVHKYLGEGPRIIWDVFHLDKENAPAIIFIDEID-AIATKRFDAQTGADR 232
Query: 319 NNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG 378
++ L LLN +DG + + I+ TN K+ LDP LLRPG +D I + P
Sbjct: 233 EVQRILLE-LLNQMDGFDQNISVKAIMA--TNRKDTLDPTLLRPGHLDHKIE--FPLPDH 287
Query: 379 FKILAFNYLKIKSHSMFDEI 398
K L F+ + K + + +E+
Sbjct: 288 RKRLIFSTITSKMN-LSEEV 306
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 147 (56.8 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 65/226 (28%), Positives = 96/226 (42%)
Query: 226 FVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIY--------DMEXXXX 277
F+K Y ++G RG +L GPPGTGK+ L A A Y +M
Sbjct: 366 FLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVG 425
Query: 278 XXXXXXXXXXVSTGNRSILVIEDIDCSIELENR-QCGGGYDENNSQVTLSGLLNFVDGLW 336
SI+ I++ID + + G DE + TL+ +L +DG
Sbjct: 426 AARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDEREN--TLNQMLVEMDGFT 483
Query: 337 SSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFK-ILA--FNYLKIKSHS 393
+ D +++ TN + LD ALLRPGR D HI++ G K I A ++LK+
Sbjct: 484 PA--DHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGE- 540
Query: 394 MFDEIEELIKEVEVTPAEEFMKSEDADVALNGLVDFLLRKKEQTMK 439
+FD L +TP F ++ A+V N R E +K
Sbjct: 541 IFDLKNRL---AALTPG--FSGADIANVC-NEAALIAARSDEDAVK 580
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 148 (57.2 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 51/193 (26%), Positives = 89/193 (46%)
Query: 218 ALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY--LKF------DI 269
A++ D+ + S +G +G L++GPPGTGK+SL A + + F +I
Sbjct: 395 AILRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEI 454
Query: 270 YDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLL 329
S +++ I+D+D R+ GG E SQ ++ LL
Sbjct: 455 ISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPA--RKEGG---EELSQRMVATLL 509
Query: 330 NFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKI 389
N +DG+ S D +++ TN + ++PAL RPGR+D I + + + L+
Sbjct: 510 NLMDGI--SRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRG 567
Query: 390 KSHSMFD-EIEEL 401
HS+ + ++E+L
Sbjct: 568 MRHSLSNIQVEQL 580
Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
Identities = 40/165 (24%), Positives = 75/165 (45%)
Query: 215 LKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF-- 267
+K L++ ++ K ++ + R+G G L++GPPG K+ + A+A N+L
Sbjct: 732 VKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKG 791
Query: 268 -DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLS 326
+++ SI+ ++ID + ++ G + S +S
Sbjct: 792 PELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDG---VSVSDRVMS 848
Query: 327 GLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHM 371
LL +DGL G ++ TN +++D ALLRPGR D +++
Sbjct: 849 QLLVELDGLHQRVGVT--VIAATNRPDKIDSALLRPGRFDRLLYV 891
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 146 (56.5 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 71/255 (27%), Positives = 107/255 (41%)
Query: 152 SFHLSFSKLFKDKVLNKYLPYVAERSKAIK-ETKKVIKLYSLCAADAINLDHPSTFDTLA 210
SF L F F + + +LP S A++ T + A D I L + TF+ +
Sbjct: 228 SFFL-FVLCFYLAIYSSFLPGKGSFSDAVRFRTSSIFD----AAVDPIQLKNV-TFEHVK 281
Query: 211 MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIY 270
KQ L ++ F+K ++ +G +G LL GPPGTGK+ L A+A Y
Sbjct: 282 GVEEAKQEL-QEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFY 340
Query: 271 DMEXXXXXXXXXXXXXXVSTGN-RSIL--VIEDIDCSIELENRQCGGGYDENN-----SQ 322
V RS+ + C I ++ GG + S+
Sbjct: 341 ----YASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSR 396
Query: 323 VTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYL-TPGGFKI 381
T++ LL +DG + G +I+ TN+ E LD AL+RPGR DM + + G +I
Sbjct: 397 QTINQLLAEMDGFKPNEGV--VIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRTEI 454
Query: 382 LAFNYLKIKSHSMFD 396
L + KIK D
Sbjct: 455 LKWYLNKIKYDQSVD 469
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 145 (56.1 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 66/241 (27%), Positives = 114/241 (47%)
Query: 198 INLDHPS-TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSS 256
I ++ P T+D + LK+ L ++ +K + ++G + RG LL+GPPG K++
Sbjct: 276 ITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTT 335
Query: 257 LIAAMANYLKFDIYDMEXXXXXXXXXXXXXXV--STGNRSILVIEDIDCSIELENRQCGG 314
L A AN + + + + +T R+ L I E + C
Sbjct: 336 LAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKR 395
Query: 315 GYDE---NNSQV---TLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMH 368
G DE N+S V LS LL +DGL + G +++ TN +D AL+RPGR D+
Sbjct: 396 G-DESSSNSSTVGERLLSTLLTEMDGLEEAKGI--LVLAATNRPYAIDAALMRPGRFDLV 452
Query: 369 IHMSYLTPGGFKILAFNYLKIKSHSMF--DEIE--ELIKEVEV-TPAE-EFMKSEDADVA 422
+ Y+ P + F L++ + +M D+++ ++ +E ++ T AE E + E V+
Sbjct: 453 L---YVPPPDLEA-RFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVS 508
Query: 423 L 423
L
Sbjct: 509 L 509
Score = 121 (47.7 bits), Expect = 0.00039, P = 0.00039
Identities = 42/148 (28%), Positives = 61/148 (41%)
Query: 236 VGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXXXXV---STGN 292
+G W RG LLYGPPGTGK+SL+ A+ + + V +
Sbjct: 51 LGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAE 110
Query: 293 RSILVIEDIDCSIELENRQ--CGGGYDENNSQVTL-SGLLNFVDGLWSSCGDERIIVF-T 348
S + D I ++ C V + S L +D S R++V +
Sbjct: 111 ASSHAVSDKPSVIFIDEIDVLCPRRDARREQDVRIASQLFTLMDSNKPSSSAPRVVVVAS 170
Query: 349 TNYKERLDPALLRPGRMDMHIHMSYLTP 376
TN + +DPAL R GR D + +S TP
Sbjct: 171 TNRVDAIDPALRRAGRFDALVEVS--TP 196
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 146 (56.5 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 50/189 (26%), Positives = 90/189 (47%)
Query: 186 VIKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYL 245
VI+ S A+D + + T D + KQAL + + ++ + ++R+G RG L
Sbjct: 444 VIRPLSRSASDEVTVGDV-TLDDVGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVL 502
Query: 246 LYGPPGTGKSSLIAAMANYLKFDIY--------DMEXXXXXXXXXXXXXXVSTGNRSILV 297
LYGPPG GK+ ++ A+A+ + ++ D S++
Sbjct: 503 LYGPPGCGKTFVVRALASTGQLSVHAVKGSELMDKWVGSSEKAVRELFRRARDSAPSLVF 562
Query: 298 IEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDP 357
++++D L R+ G +D S ++ LL +DG+ D +++ TN + +DP
Sbjct: 563 LDELDA---LAPRR-GQSFDSGVSDRVVAALLTELDGI-DPLRDV-VMLGATNRPDLIDP 616
Query: 358 ALLRPGRMD 366
ALLRPGR++
Sbjct: 617 ALLRPGRLE 625
>UNIPROTKB|A2VDN5 [details] [associations]
symbol:SPAST "Spastin" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0007109
"cytokinesis, completion of separation" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] [GO:0051260 "protein
homooligomerization" evidence=ISS] [GO:0051013 "microtubule
severing" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0043014 "alpha-tubulin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005768 "endosome" evidence=ISS]
[GO:0030496 "midbody" evidence=ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0048487 GO:GO:0008017 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 EMBL:BC133327 IPI:IPI00840116
RefSeq:NP_001075060.1 UniGene:Bt.46123 ProteinModelPortal:A2VDN5
SMR:A2VDN5 STRING:A2VDN5 Ensembl:ENSBTAT00000046919 GeneID:521442
KEGG:bta:521442 CTD:6683 HOVERGEN:HBG108502 InParanoid:A2VDN5
OMA:HKSTPKT OrthoDB:EOG4NZTTF NextBio:20873307 ArrayExpress:A2VDN5
Uniprot:A2VDN5
Length = 614
Score = 145 (56.1 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 68/245 (27%), Positives = 114/245 (46%)
Query: 174 AERSKAIKETKKV-IKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREF 232
A + K +K + V L +L + ++ FD +A + KQAL + + R E
Sbjct: 306 ARKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPEL 365
Query: 233 YSRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIY--DMEXXXXXXXXXXXXXX 287
++ + +A RG LL+GPPG GK+ L +AA +N F+I +
Sbjct: 366 FTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRAL 424
Query: 288 VSTGNR---SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERI 344
+ SI+ I+++D S+ E R+ G +D + T L+ F DG+ S GD+R+
Sbjct: 425 FAVARELQPSIIFIDEVD-SLLCERRE--GEHDASRRLKT-EFLIEF-DGV-QSAGDDRV 478
Query: 345 IVF-TTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEELIK 403
+V TN + LD A+LR R +++S L ++L L K S + +EL +
Sbjct: 479 LVMGATNRPQELDEAVLR--RFTKRVYVS-LPNEETRLLLLKNLLCKQGSPLTQ-KELAQ 534
Query: 404 EVEVT 408
+T
Sbjct: 535 LARMT 539
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 143 (55.4 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 58/199 (29%), Positives = 92/199 (46%)
Query: 227 VKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXX 278
+K E + ++G +G L+YGPPGTGK+ L A A +LK + M
Sbjct: 231 MKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLVQMFIGDGA 290
Query: 279 XXXXXXXXXVSTGNRSILVIEDIDC--SIELENRQCGGGYDENNSQVTLSGLLNFVDGLW 336
SI+ I+++D + ++ + G + Q T+ LLN +DG
Sbjct: 291 KLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSG----DREVQRTMLELLNQLDGFA 346
Query: 337 SSCGDERI-IVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMF 395
S D+RI ++ TN + LDPALLR GR+D I + P + N L+I S M
Sbjct: 347 S---DDRIKVLAATNRVDVLDPALLRSGRLDRKIE--FPLPN--EEARANILQIHSRKM- 398
Query: 396 DEIEELIKEVEVTPA-EEF 413
+E+ + E+ + +EF
Sbjct: 399 -TVEDSVNWAELARSTDEF 416
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 145 (56.1 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 54/183 (29%), Positives = 81/183 (44%)
Query: 198 INLDHPST-FDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSS 256
+N + P F +A K+ + + +D F+K E Y ++G +G LL GPPGTGK+
Sbjct: 168 VNSEKPKVKFSDVAGVEEAKEEVKEIVD-FLKYPERYIKLGAKIPKGLLLVGPPGTGKTL 226
Query: 257 LIAAMANYLKFDIYDMEXXXXXXXXXXXXXX-----VSTGNR---SILVIEDIDCSIELE 308
L A+A + + + +I+ I++ID +I
Sbjct: 227 LAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEID-AIGKS 285
Query: 309 NRQCG--GGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMD 366
G GG DE TL+ LL +DG + I++ TN E LD ALLRPGR D
Sbjct: 286 RAASGMMGGNDEREQ--TLNQLLAEMDGFGTESSPV-IVLAATNRPEVLDAALLRPGRFD 342
Query: 367 MHI 369
+
Sbjct: 343 RQV 345
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 145 (56.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 52/176 (29%), Positives = 78/176 (44%)
Query: 204 STF-DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA 262
+TF D D ++ + +L +++ + ++G G L+ GPPGTGK+ L A+A
Sbjct: 154 TTFADVAGCDEAKEE--VKELVDYLRDPTKFQKLGGRIPTGVLMVGPPGTGKTLLAKAIA 211
Query: 263 NYLKFDIY-----DMEXXXXXXXXXXXXXXVSTGNRS---ILVIEDIDCSIELENRQCGG 314
K + D +S I+ I++ID GG
Sbjct: 212 GESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQRGAGLGG 271
Query: 315 GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFT-TNYKERLDPALLRPGRMDMHI 369
G+DE TL+ +L +DG G+E IIV TN + LD ALLRPGR D +
Sbjct: 272 GHDEREQ--TLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDSALLRPGRFDRQV 322
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 154 (59.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 53/162 (32%), Positives = 75/162 (46%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF--- 267
KQ +++ + F+K + Y +G +G LL GPPGTGK+ L A A +L
Sbjct: 331 KQEIMEFV-HFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGS 389
Query: 268 DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSG 327
D +M SI+ I++ID R GG DE S TL+
Sbjct: 390 DFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERES--TLNQ 447
Query: 328 LLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
LL +DG ++ G +++ TN + LD ALLRPGR D I
Sbjct: 448 LLVEMDGFGTTAGV--VVLAGTNRPDILDKALLRPGRFDRQI 487
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 389 IKSHSM-FDEIEELIKEVEVTPAEEFMK 415
++ H + EI EL+ E EV ++ +K
Sbjct: 728 VEEHKVKVAEIAELLLEKEVLHQDDLLK 755
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/163 (30%), Positives = 75/163 (46%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXX 275
KQ + + +D ++K E Y R+G RG LL GPPG GK+ L A+A + M
Sbjct: 350 KQEVKEFVD-YLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGS 408
Query: 276 XXXXXXXXXXXX-----VSTGNRS---ILVIEDIDC-SIELENRQCGGGYDENNSQVTLS 326
G + I+ I++ID + + G S+ TL+
Sbjct: 409 EFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGSSGESEQTLN 468
Query: 327 GLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
LL +DG+ + G +++ +TN + LD ALLRPGR D HI
Sbjct: 469 QLLVEMDGMATKEGV--LMLASTNRADILDKALLRPGRFDRHI 509
>UNIPROTKB|Q05AS3 [details] [associations]
symbol:spast "Spastin" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0051301 GO:GO:0051260 GO:GO:0005815 GO:GO:0007049
Pfam:PF04212 eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:CR760974
EMBL:BC123973 RefSeq:NP_001016453.1 UniGene:Str.10574
ProteinModelPortal:Q05AS3 SMR:Q05AS3 STRING:Q05AS3
Ensembl:ENSXETT00000057121 GeneID:549207 KEGG:xtr:549207
Xenbase:XB-GENE-947839 Bgee:Q05AS3 Uniprot:Q05AS3
Length = 603
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 75/279 (26%), Positives = 128/279 (45%)
Query: 171 PYVAERSKAIKETKKV-IKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKR 229
P A R K +K + V L +L + ++ F +A + KQAL + + R
Sbjct: 292 PTTAVRKKDMKNLRNVDSNLANLILNEIVDSGPTVKFADIAGQDLAKQALQEIVILPSIR 351
Query: 230 REFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIY--DMEXXXXXXXXXXX 284
E ++ + +A RG LL+GPPG GK+ L +AA +N F+I +
Sbjct: 352 PELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLV 410
Query: 285 XXXVSTGNR---SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGD 341
S SI+ I+++D S+ E R+ G +D + T L+ F DG+ S GD
Sbjct: 411 RALFSVARELQPSIIFIDEVD-SLLCERRE--GEHDASRRLKT-EFLIEF-DGVQSG-GD 464
Query: 342 ERIIVF-TTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEE 400
+R++V TN + LD A+LR R +++S L ++L L K + +E +E
Sbjct: 465 DRVLVMGATNRPQELDDAVLR--RFTKRVYVS-LPNEETRLLLLKNLLSKQGNPLNE-KE 520
Query: 401 LIKEVEVTPAEEFMKSEDADVALNGLVDFLLRKKEQTMK 439
L + +T E + S+ +A + + + K + +K
Sbjct: 521 LTQLSRLT--EGYSGSDITALAKDAALGPIRELKPEQVK 557
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 62/206 (30%), Positives = 99/206 (48%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TF+ + KQ L + ++ F+K E +S +G +G LL GPPGTGK+ L A+A
Sbjct: 298 TFEDVKGCDEAKQELKEVVE-FLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGE 356
Query: 265 LKFDIYDM------EXXXXXXXXXXXXXXVSTGNRS--ILVIEDIDCSIELENRQCGGGY 316
K + E + R+ ++ I++ID S+ + R +
Sbjct: 357 AKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEID-SVGAK-RTNSVLH 414
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTP 376
N T++ LL+ +DG + G I++ TN ++ LD ALLRPGR D+ + +S TP
Sbjct: 415 PYANQ--TINQLLSEMDGFHQNAGV--IVLGATNRRDDLDQALLRPGRFDVEVMVS--TP 468
Query: 377 ---GGFKILAFNYLKIKSHSMFDEIE 399
G +IL+ KI + DEI+
Sbjct: 469 DFTGRKEILSLYLTKI----LHDEID 490
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 153 (58.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 50/168 (29%), Positives = 77/168 (45%)
Query: 214 VLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-NY-LKF---- 267
++K ++D +D +K E ++ G + G L YGPPGTGK+ L A+A N+ L F
Sbjct: 822 LVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVK 880
Query: 268 --DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQ--CGGGYDENNSQV 323
++ +M ++ +++D Q GG D SQ
Sbjct: 881 GPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQ- 939
Query: 324 TLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHM 371
LL +DG+ S GD +V TN + LD ALLRPGR D +++
Sbjct: 940 ----LLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYL 983
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 26/100 (26%), Positives = 40/100 (40%)
Query: 109 NEGQ-KVVDTFEGMQLTWELVTTENQKTSLDYDSGLY-ASETAHKSFHLSFSKLFKDKVL 166
NEG V+ + W +T S+D + L S+T S + +L ++ +
Sbjct: 449 NEGGIDVIPIGNPDAVAWFKITEVKGANSIDTNQFLIDPSKTMLVSSGVESIRLPQNSFV 508
Query: 167 NKY----LPYVA--ERSKAIKETKKVIKLYSLCAADAINL 200
Y LP + E + K K+ K S C A INL
Sbjct: 509 KWYQYLNLPPIFNYEETGDFKYAKEFKKTLSTCLASKINL 548
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 153 (58.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 50/168 (29%), Positives = 77/168 (45%)
Query: 214 VLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-NY-LKF---- 267
++K ++D +D +K E ++ G + G L YGPPGTGK+ L A+A N+ L F
Sbjct: 822 LVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVK 880
Query: 268 --DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQ--CGGGYDENNSQV 323
++ +M ++ +++D Q GG D SQ
Sbjct: 881 GPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQ- 939
Query: 324 TLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHM 371
LL +DG+ S GD +V TN + LD ALLRPGR D +++
Sbjct: 940 ----LLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYL 983
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 26/100 (26%), Positives = 40/100 (40%)
Query: 109 NEGQ-KVVDTFEGMQLTWELVTTENQKTSLDYDSGLY-ASETAHKSFHLSFSKLFKDKVL 166
NEG V+ + W +T S+D + L S+T S + +L ++ +
Sbjct: 449 NEGGIDVIPIGNPDAVAWFKITEVKGANSIDTNQFLIDPSKTMLVSSGVESIRLPQNSFV 508
Query: 167 NKY----LPYVA--ERSKAIKETKKVIKLYSLCAADAINL 200
Y LP + E + K K+ K S C A INL
Sbjct: 509 KWYQYLNLPPIFNYEETGDFKYAKEFKKTLSTCLASKINL 548
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 55/187 (29%), Positives = 94/187 (50%)
Query: 197 AINLDH-PS-TF-DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTG 253
A+ +D P+ T+ D +D +++ L++ + +KR + + +G +G L+YGPPGTG
Sbjct: 169 AMEVDEKPTETYSDVGGLDKQIEE-LVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTG 227
Query: 254 KSSLI---AAMAN--YLKF---DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDC-- 303
K+ L AA N +LK + M +I+ I+++D
Sbjct: 228 KTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIG 287
Query: 304 SIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERI-IVFTTNYKERLDPALLRP 362
+ ++ + G + Q T+ LLN +DG +SS D+R+ ++ TN + LDPALLR
Sbjct: 288 TKRFDSEKSG----DREVQRTMLELLNQLDG-FSS--DDRVKVLAATNRVDVLDPALLRS 340
Query: 363 GRMDMHI 369
GR+D I
Sbjct: 341 GRLDRKI 347
>UNIPROTKB|F1PR99 [details] [associations]
symbol:SPAST "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0043014
"alpha-tubulin binding" evidence=IEA] [GO:0034214 "protein
hexamerization" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0007109 "cytokinesis,
completion of separation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005768 GO:GO:0051260
Pfam:PF04212 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
SMART:SM00745 GO:GO:0034214 GeneTree:ENSGT00570000078874 KO:K13254
CTD:6683 OMA:HKSTPKT EMBL:AAEX03010834 RefSeq:XP_850973.1
Ensembl:ENSCAFT00000009227 GeneID:608582 KEGG:cfa:608582
Uniprot:F1PR99
Length = 624
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 68/245 (27%), Positives = 114/245 (46%)
Query: 174 AERSKAIKETKKV-IKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREF 232
A + K +K + V L +L + ++ FD +A + KQAL + + R E
Sbjct: 316 ARKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPEL 375
Query: 233 YSRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIY--DMEXXXXXXXXXXXXXX 287
++ + +A RG LL+GPPG GK+ L +AA +N F+I +
Sbjct: 376 FTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRAL 434
Query: 288 VSTGNR---SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERI 344
+ SI+ I+++D S+ E R+ G +D + T L+ F DG+ S GD+R+
Sbjct: 435 FAVARELQPSIIFIDEVD-SLLCERRE--GEHDASRRLKT-EFLIEF-DGV-QSAGDDRV 488
Query: 345 IVF-TTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEELIK 403
+V TN + LD A+LR R +++S L ++L L K S + +EL +
Sbjct: 489 LVMGATNRPQELDEAVLR--RFIKRVYVS-LPNEETRLLLLKNLLCKQGSPLTQ-KELAQ 544
Query: 404 EVEVT 408
+T
Sbjct: 545 LARMT 549
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 54/201 (26%), Positives = 93/201 (46%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK 266
D MD + KQ + + ++ + E Y ++G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMD-IQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 267 FDI-------YDMEXXXXXXXXXXXXXXVSTGNR-SILVIEDIDCSIELENRQCGGGYDE 318
+ + ++ N +I+ I++ID +I + G D
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-AIATKRFDAQTGADR 283
Query: 319 NNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGG 378
++ L LLN +DG + + ++ TN + LDPALL PGR+D I L
Sbjct: 284 EVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLCPGRLDRKIEFP-LPDRR 339
Query: 379 FKILAFNYLKIKSHSMFDEIE 399
K L F+ + K + + +E++
Sbjct: 340 QKRLVFSTITSKMN-LSEEVD 359
>UNIPROTKB|Q6AZT2 [details] [associations]
symbol:spast "Spastin" species:8355 "Xenopus laevis"
[GO:0001578 "microtubule bundle formation" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
GO:GO:0048487 GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
EMBL:BC077358 RefSeq:NP_001086725.1 UniGene:Xl.32426
ProteinModelPortal:Q6AZT2 SMR:Q6AZT2 GeneID:446560 KEGG:xla:446560
Xenbase:XB-GENE-947846 Uniprot:Q6AZT2
Length = 600
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 67/247 (27%), Positives = 114/247 (46%)
Query: 171 PYVAERSKAIKETKKV-IKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKR 229
P A R K +K + V L +L + ++ F +A + KQAL + + R
Sbjct: 289 PTTAVRKKDMKNLRNVDSNLANLILNEIVDSGPSVKFADIAGQDLAKQALQEIVILPSIR 348
Query: 230 REFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIY--DMEXXXXXXXXXXX 284
E ++ + +A RG LL+GPPG GK+ L +AA +N F+I +
Sbjct: 349 PELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLV 407
Query: 285 XXXVSTGNR---SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGD 341
S SI+ I+++D S+ E R+ G +D + T L+ F DG+ S GD
Sbjct: 408 RALFSVARELQPSIIFIDEVD-SLLCERRE--GEHDASRRLKT-EFLIEF-DGVQSG-GD 461
Query: 342 ERIIVF-TTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFD-EIE 399
+R++V TN + LD A+LR R ++++ +L N L + + + + E+
Sbjct: 462 DRVLVMGATNRPQELDDAVLR--RFTKRVYVALPNEETRLVLLKNLLSKQGNPLSEKELT 519
Query: 400 ELIKEVE 406
+L + E
Sbjct: 520 QLSRLTE 526
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 62/211 (29%), Positives = 95/211 (45%)
Query: 242 RGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXXXXXXXVSTGNR 293
+G LLYGPPGTGK+ A+AN +++ ++ T
Sbjct: 220 KGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 279
Query: 294 SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKE 353
I+ ++ID ++ G G D N Q T+ L+ +DG + + G+ +++ F TN
Sbjct: 280 CIIFFDEID-AVGGARFDDGAGGD-NEVQRTMLELITQLDG-FDARGNIKVM-FATNRPS 335
Query: 354 RLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIE---ELIKEV--EVT 408
LDPAL+RPGR+D I S G N L+I + SM E + ELI + T
Sbjct: 336 TLDPALMRPGRIDRKIEFSLPDVEG----RANILRIHAKSMSVERDIRWELISRLCPNAT 391
Query: 409 PAEEFMKSEDADVALNGLVDFLLRKKEQTMK 439
AE ++S + G+ R+K T K
Sbjct: 392 GAE--LRSVATEA---GMFAIRARRKVATEK 417
>UNIPROTKB|Q9UBP0 [details] [associations]
symbol:SPAST "Spastin" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IPI] [GO:0008568
"microtubule-severing ATPase activity" evidence=IDA] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0043014 "alpha-tubulin
binding" evidence=IPI] [GO:0051013 "microtubule severing"
evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0034214 "protein hexamerization" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0007109 "cytokinesis,
completion of separation" evidence=IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0001578 "microtubule
bundle formation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030496 "midbody" evidence=IDA] [GO:0031410 "cytoplasmic
vesicle" evidence=IDA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 EMBL:CH471053 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0008219 GO:GO:0005768 GO:GO:0051260
GO:GO:0031410 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0007109 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
SMART:SM00745 PDB:3EAB PDBsum:3EAB GO:GO:0034214
HOGENOM:HOG000225146 KO:K13254 HAMAP:MF_03021 CTD:6683
HOVERGEN:HBG108502 OMA:HKSTPKT OrthoDB:EOG4NZTTF EMBL:AJ246001
EMBL:AJ246003 EMBL:AB029006 EMBL:BC150260 IPI:IPI00002707
IPI:IPI00219816 IPI:IPI00923524 IPI:IPI00923553 RefSeq:NP_055761.2
RefSeq:NP_955468.1 UniGene:Hs.468091 PDB:3VFD PDBsum:3VFD
ProteinModelPortal:Q9UBP0 SMR:Q9UBP0 IntAct:Q9UBP0 STRING:Q9UBP0
PhosphoSite:Q9UBP0 DMDM:12230611 PaxDb:Q9UBP0 PeptideAtlas:Q9UBP0
PRIDE:Q9UBP0 Ensembl:ENST00000315285 Ensembl:ENST00000345662
GeneID:6683 KEGG:hsa:6683 UCSC:uc002roc.3 GeneCards:GC02P032288
HGNC:HGNC:11233 HPA:HPA017311 MIM:182601 MIM:604277
neXtProt:NX_Q9UBP0 Orphanet:100985 PharmGKB:PA36063
InParanoid:Q9UBP0 PhylomeDB:Q9UBP0 ChiTaRS:SPAST
EvolutionaryTrace:Q9UBP0 GenomeRNAi:6683 NextBio:26047
ArrayExpress:Q9UBP0 Bgee:Q9UBP0 CleanEx:HS_SPAST
Genevestigator:Q9UBP0 Uniprot:Q9UBP0
Length = 616
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 70/249 (28%), Positives = 115/249 (46%)
Query: 171 PYVAERSKA-IKETKKV-IKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVK 228
P A R K +K + V L +L + ++ FD +A + KQAL + +
Sbjct: 304 PTTATRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSL 363
Query: 229 RREFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIY--DMEXXXXXXXXXX 283
R E ++ + +A RG LL+GPPG GK+ L +AA +N F+I +
Sbjct: 364 RPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKL 422
Query: 284 XXXXVSTGNR---SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCG 340
+ SI+ I+++D S+ E R+ G +D + T L+ F DG+ S G
Sbjct: 423 VRALFAVARELQPSIIFIDEVD-SLLCERRE--GEHDASRRLKT-EFLIEF-DGV-QSAG 476
Query: 341 DERIIVF-TTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIE 399
D+R++V TN + LD A+LR R +++S L ++L L K S + +
Sbjct: 477 DDRVLVMGATNRPQELDEAVLR--RFIKRVYVS-LPNEETRLLLLKNLLCKQGSPLTQ-K 532
Query: 400 ELIKEVEVT 408
EL + +T
Sbjct: 533 ELAQLARMT 541
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 62/233 (26%), Positives = 101/233 (43%)
Query: 226 FVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDM------EXXXXXX 279
++K E + ++G +G LL GPPG GK+ L A+A + M E
Sbjct: 327 YLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLG 386
Query: 280 XXXXXXXXVSTGNRS--ILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWS 337
R+ I+ I++ID ++ + G+ + TL+ LL +DG+ +
Sbjct: 387 AARVRSLFKEARARAPCIVYIDEID-AVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGT 445
Query: 338 SCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLK---IKSHSM 394
+ D I++ +TN + LD AL+RPGR+D H+ + T + + +LK + S
Sbjct: 446 A--DHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSS 503
Query: 395 F--DEIEELIKEVEVTPAEE--FMKSEDADVALN----GLVDFLLRKKEQTMK 439
F + EL T + K E VA + LV +LL E MK
Sbjct: 504 FYSQRLAELTPGFSGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMK 556
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 62/233 (26%), Positives = 101/233 (43%)
Query: 226 FVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDM------EXXXXXX 279
++K E + ++G +G LL GPPG GK+ L A+A + M E
Sbjct: 327 YLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLG 386
Query: 280 XXXXXXXXVSTGNRS--ILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWS 337
R+ I+ I++ID ++ + G+ + TL+ LL +DG+ +
Sbjct: 387 AARVRSLFKEARARAPCIVYIDEID-AVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGT 445
Query: 338 SCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLK---IKSHSM 394
+ D I++ +TN + LD AL+RPGR+D H+ + T + + +LK + S
Sbjct: 446 A--DHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSS 503
Query: 395 F--DEIEELIKEVEVTPAEE--FMKSEDADVALN----GLVDFLLRKKEQTMK 439
F + EL T + K E VA + LV +LL E MK
Sbjct: 504 FYSQRLAELTPGFSGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMK 556
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 50/162 (30%), Positives = 73/162 (45%)
Query: 226 FVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEXXXXXXXXXXXX 285
++K ++++G RG LL GPPG GK+ L A+A M
Sbjct: 303 YLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMNGSEFVEVIGGLG 362
Query: 286 XXVSTG----NRS----ILVIEDIDC--SIELENRQCGGGYD--ENNSQVTLSGLLNFVD 333
G RS I+ I++ID E GGG+ + TL+ LL +D
Sbjct: 363 ASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGGGFGGGSGEEEQTLNQLLVEMD 422
Query: 334 GLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLT 375
G+ S G+ +++ +TN + LD ALLRPGR D HI + T
Sbjct: 423 GMGS--GNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPT 462
>DICTYBASE|DDB_G0282215 [details] [associations]
symbol:DDB_G0282215 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282215 GO:GO:0005524 GO:GO:0017111
EMBL:AAFI02000046 RefSeq:XP_640290.2 ProteinModelPortal:Q54SU5
EnsemblProtists:DDB0267128 GeneID:8623467 KEGG:ddi:DDB_G0282215
OMA:PNINFIS Uniprot:Q54SU5
Length = 534
Score = 140 (54.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 55/197 (27%), Positives = 88/197 (44%)
Query: 235 RVGKAWKRGYLLYGPPGTGKSSLIAAMA------NYLKF---DIYDMEXXXXXXXXXXXX 285
R+G G LLYGPPG GKS + A+A N++ DI D
Sbjct: 301 RLGIKSPSGVLLYGPPGNGKSLIARAIASSSPNINFISISSTDIIDPVVGASEKNLSKLF 360
Query: 286 XXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVT---LSGLLNFVDGLWSSCG-- 340
+ + IL ++ ++ +L G+D+++ Q + LS LL +DG++ G
Sbjct: 361 KTLRESSPCILFLDQVEVLAKLR------GFDDSSEQSSDRLLSCLLTEIDGIYGGGGSG 414
Query: 341 --------DERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSH 392
++ I++ T + LDP++LRPGR D HI + P K + K +
Sbjct: 415 NNNNNNNSNQSIVLAATTRIDLLDPSILRPGRFDYHIEI----PNPNKEARLDIFKKITK 470
Query: 393 SM-FDEIEELIKEVEVT 408
SM DE + I+ E+T
Sbjct: 471 SMPLDESVDFIQLSELT 487
Score = 44 (20.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 12/70 (17%), Positives = 30/70 (42%)
Query: 48 LEGLFGKFSDQLTLIIEQSEGFSVNEIYQAAELYLSTRITPSIQQLRVSQAPREKSLSVT 107
+E +F S Q ++ E S+++I + Y+ R+ + L + + + +
Sbjct: 79 IESIFNTASSQSPFVLVFEEIDSISQIRNDSLGYIEQRVVSNFLTLLENNSKKRSVFVIG 138
Query: 108 INEGQKVVDT 117
+ + +DT
Sbjct: 139 VTSRIESIDT 148
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 48/158 (30%), Positives = 74/158 (46%)
Query: 220 IDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-------YLKFDIYD- 271
+ +L F+ E +S +G +G LL GPPGTGK+ L A+A Y+ +D
Sbjct: 327 LQELVEFLLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYMSGSEFDE 386
Query: 272 MEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNF 331
+ + + +I+ I+++D +I + + Y + TL+ LL
Sbjct: 387 VYVGVGAKRVRELFNQARSKSPAIIFIDELD-AIGAKRNERDAAYVKQ----TLNQLLTE 441
Query: 332 VDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
+DG S G II+ TNY E LD AL RPGR D +
Sbjct: 442 LDGFSQSTGV--IILAATNYPELLDKALTRPGRFDRKV 477
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 52/163 (31%), Positives = 75/163 (46%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF--- 267
KQ +++ + F++ + Y +G +G LL GPPGTGK+ L A A +L
Sbjct: 336 KQEIMEFV-HFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGS 394
Query: 268 DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQ-CGGGYDENNSQVTLS 326
D +M SI+ I++ID R GG DE S TL+
Sbjct: 395 DFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGGNDERES--TLN 452
Query: 327 GLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
LL +DG ++ G +++ TN + LD ALLRPGR D I
Sbjct: 453 QLLVEMDGFGTTAGV--VVLAGTNRPDILDKALLRPGRFDRQI 493
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 44/150 (29%), Positives = 72/150 (48%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E + +G +G LL+GPPGTGK+ A+AN +++ ++
Sbjct: 62 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVR 121
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
T ++ ++ID +I G G D N Q T+ L+N +DG + G+
Sbjct: 122 ELFEMARTKKACLIFFDEID-AIGGARFDDGAGGD-NEVQRTMLELINQLDG-FDPRGNI 178
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
++++ TN + LDPAL+RPGR+D I S
Sbjct: 179 KVLM-ATNRPDTLDPALMRPGRLDRKIEFS 207
>RGD|1308494 [details] [associations]
symbol:Spast "spastin" species:10116 "Rattus norvegicus"
[GO:0001578 "microtubule bundle formation" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
"endosome" evidence=ISO;ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISO;ISS] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA;ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO;ISS] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007109 "cytokinesis, completion of
separation" evidence=ISO;ISS] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=ISO;ISS] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISO;ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO;ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA;ISO] [GO:0034214 "protein hexamerization"
evidence=ISO;ISS] [GO:0043014 "alpha-tubulin binding"
evidence=ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048487 "beta-tubulin binding" evidence=ISO;ISS]
[GO:0051013 "microtubule severing" evidence=ISO;ISS] [GO:0051260
"protein homooligomerization" evidence=ISO;ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0007109 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0043014
SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:BC166846
IPI:IPI00365573 RefSeq:NP_001102172.2 UniGene:Rn.41645
ProteinModelPortal:B2RYN7 SMR:B2RYN7 STRING:B2RYN7 PRIDE:B2RYN7
GeneID:362700 KEGG:rno:362700 UCSC:RGD:1308494 NextBio:680920
ArrayExpress:B2RYN7 Genevestigator:B2RYN7 Uniprot:B2RYN7
Length = 581
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 70/249 (28%), Positives = 115/249 (46%)
Query: 171 PYVAERSKA-IKETKKV-IKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVK 228
P A R K +K + V L +L + ++ FD +A + KQAL + +
Sbjct: 269 PTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSL 328
Query: 229 RREFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIY--DMEXXXXXXXXXX 283
R E ++ + +A RG LL+GPPG GK+ L +AA +N F+I +
Sbjct: 329 RPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKL 387
Query: 284 XXXXVSTGNR---SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCG 340
+ SI+ I+++D S+ E R+ G +D + T L+ F DG+ S G
Sbjct: 388 VRALFAVARELQPSIIFIDEVD-SLLCERRE--GEHDASRRLKT-EFLIEF-DGV-QSAG 441
Query: 341 DERIIVF-TTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIE 399
D+R++V TN + LD A+LR R +++S L ++L L K S + +
Sbjct: 442 DDRVLVMGATNRPQELDEAVLR--RFIKRVYVS-LPNEETRLLLLKNLLCKQGSPLTQ-K 497
Query: 400 ELIKEVEVT 408
EL + +T
Sbjct: 498 ELAQLARMT 506
>UNIPROTKB|F1M9D2 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
SMART:SM00745 GeneTree:ENSGT00570000078874 IPI:IPI00365573
Ensembl:ENSRNOT00000039375 ArrayExpress:F1M9D2 Uniprot:F1M9D2
Length = 581
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 70/249 (28%), Positives = 115/249 (46%)
Query: 171 PYVAERSKA-IKETKKV-IKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVK 228
P A R K +K + V L +L + ++ FD +A + KQAL + +
Sbjct: 269 PTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSL 328
Query: 229 RREFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIY--DMEXXXXXXXXXX 283
R E ++ + +A RG LL+GPPG GK+ L +AA +N F+I +
Sbjct: 329 RPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKL 387
Query: 284 XXXXVSTGNR---SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCG 340
+ SI+ I+++D S+ E R+ G +D + T L+ F DG+ S G
Sbjct: 388 VRALFAVARELQPSIIFIDEVD-SLLCERRE--GEHDASRRLKT-EFLIEF-DGV-QSAG 441
Query: 341 DERIIVF-TTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIE 399
D+R++V TN + LD A+LR R +++S L ++L L K S + +
Sbjct: 442 DDRVLVMGATNRPQELDEAVLR--RFIKRVYVS-LPNEETRLLLLKNLLCKQGSPLTQ-K 497
Query: 400 ELIKEVEVT 408
EL + +T
Sbjct: 498 ELAQLARMT 506
>UNIPROTKB|D4A0I3 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
RGD:1308494 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 SMART:SM00745 GO:GO:0034214
OrthoDB:EOG4NZTTF IPI:IPI00947816 Ensembl:ENSRNOT00000068220
ArrayExpress:D4A0I3 Uniprot:D4A0I3
Length = 613
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 70/249 (28%), Positives = 115/249 (46%)
Query: 171 PYVAERSKA-IKETKKV-IKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVK 228
P A R K +K + V L +L + ++ FD +A + KQAL + +
Sbjct: 301 PTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSL 360
Query: 229 RREFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIY--DMEXXXXXXXXXX 283
R E ++ + +A RG LL+GPPG GK+ L +AA +N F+I +
Sbjct: 361 RPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKL 419
Query: 284 XXXXVSTGNR---SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCG 340
+ SI+ I+++D S+ E R+ G +D + T L+ F DG+ S G
Sbjct: 420 VRALFAVARELQPSIIFIDEVD-SLLCERRE--GEHDASRRLKT-EFLIEF-DGV-QSAG 473
Query: 341 DERIIVF-TTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIE 399
D+R++V TN + LD A+LR R +++S L ++L L K S + +
Sbjct: 474 DDRVLVMGATNRPQELDEAVLR--RFIKRVYVS-LPNEETRLLLLKNLLCKQGSPLTQ-K 529
Query: 400 ELIKEVEVT 408
EL + +T
Sbjct: 530 ELAQLARMT 538
>MGI|MGI:1858896 [details] [associations]
symbol:Spast "spastin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768 "endosome"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007109
"cytokinesis, completion of separation" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=ISO] [GO:0008568 "microtubule-severing ATPase
activity" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=ISO] [GO:0034214 "protein hexamerization"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=ISO] [GO:0051013
"microtubule severing" evidence=ISO;IGI;IMP;IDA] [GO:0051260
"protein homooligomerization" evidence=ISO] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1858896 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AK129282 EMBL:BC046286 EMBL:AK007793
EMBL:AJ246002 IPI:IPI00420580 RefSeq:NP_001156342.1
RefSeq:NP_058658.2 UniGene:Mm.19804 ProteinModelPortal:Q9QYY8
SMR:Q9QYY8 STRING:Q9QYY8 PhosphoSite:Q9QYY8 PaxDb:Q9QYY8
PRIDE:Q9QYY8 Ensembl:ENSMUST00000024869 GeneID:50850 KEGG:mmu:50850
UCSC:uc008dnz.2 InParanoid:Q9QYY8 NextBio:307827 Bgee:Q9QYY8
CleanEx:MM_SPAST Genevestigator:Q9QYY8
GermOnline:ENSMUSG00000024068 Uniprot:Q9QYY8
Length = 614
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 70/249 (28%), Positives = 115/249 (46%)
Query: 171 PYVAERSKA-IKETKKV-IKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVK 228
P A R K +K + V L +L + ++ FD +A + KQAL + +
Sbjct: 302 PTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSL 361
Query: 229 RREFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIY--DMEXXXXXXXXXX 283
R E ++ + +A RG LL+GPPG GK+ L +AA +N F+I +
Sbjct: 362 RPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKL 420
Query: 284 XXXXVSTGNR---SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCG 340
+ SI+ I+++D S+ E R+ G +D + T L+ F DG+ S G
Sbjct: 421 VRALFAVARELQPSIIFIDEVD-SLLCERRE--GEHDASRRLKT-EFLIEF-DGV-QSAG 474
Query: 341 DERIIVF-TTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIE 399
D+R++V TN + LD A+LR R +++S L ++L L K S + +
Sbjct: 475 DDRVLVMGATNRPQELDEAVLR--RFIKRVYVS-LPNEETRLLLLKNLLCKQGSPLTQ-K 530
Query: 400 ELIKEVEVT 408
EL + +T
Sbjct: 531 ELAQLARMT 539
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 142 (55.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 45/158 (28%), Positives = 74/158 (46%)
Query: 226 FVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDM------EXXXXXX 279
++K E + ++G +G LL GPPG GK+ L A+A + M E
Sbjct: 327 YLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLG 386
Query: 280 XXXXXXXXVSTGNRS--ILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWS 337
R+ I+ I++ID ++ + G+ + TL+ LL +DG+ +
Sbjct: 387 AARVRSLFKEARARAPCIVYIDEID-AVGKKRSTAVSGFSNTEEEQTLNQLLVEMDGMGT 445
Query: 338 SCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLT 375
+ D I++ TN + LD ALLRPGR+D H+ + T
Sbjct: 446 T--DHVIVLAATNRADILDNALLRPGRLDRHVFIDLPT 481
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 142 (55.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 45/158 (28%), Positives = 75/158 (47%)
Query: 226 FVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDM------EXXXXXX 279
++K E + ++G +G LL GPPG GK+ L A+A + M E
Sbjct: 327 YLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLG 386
Query: 280 XXXXXXXXVSTGNRS--ILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWS 337
R+ I+ I++ID ++ + G+ + TL+ LL +DG+ +
Sbjct: 387 AARVRSLFKEARARAPCIVYIDEID-AVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGT 445
Query: 338 SCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLT 375
+ D I++ +TN + LD ALLRPGR+D H+ + T
Sbjct: 446 T--DHVIVLASTNRADILDNALLRPGRLDRHVFIDLPT 481
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 135 (52.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 45/177 (25%), Positives = 84/177 (47%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-- 262
T+D + +K L + ++ V + Y + G A +G L +GPPGTGK+ L A+A
Sbjct: 486 TWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATE 545
Query: 263 ---NYLKF---DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGY 316
N++ ++ M +++ ++++D SI + GG +
Sbjct: 546 VSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELD-SIA---KARGGSH 601
Query: 317 DENN--SQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHM 371
+ S ++ LL +DG+ + ++ TN +++DPALLRPGR+D I++
Sbjct: 602 GDAGGASDRVVNQLLTEMDGM--NAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYV 656
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 55/222 (24%), Positives = 94/222 (42%)
Query: 193 CAADAINL-DHPSTFDTLAMDPV---LKQ-ALIDDLDRFVKRR-EFYSRVGKAWKRGYLL 246
C + IN D ++ + + D + KQ A I +L R + + +G +G L+
Sbjct: 195 CEGEPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILM 254
Query: 247 YGPPGTGKSSLIAAMANYL-KF-------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVI 298
YGPPGTGK+ + A+AN F +I + SI+ I
Sbjct: 255 YGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFI 314
Query: 299 EDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPA 358
++ID SI + + G + +S LL +DG+ +++ TN +DPA
Sbjct: 315 DEID-SIAPKRDKTNGEVERR----VVSQLLTLMDGM--KARSNVVVIAATNRPNSIDPA 367
Query: 359 LLRPGRMDMHIHMSYL-TPGGFKILAFNYLKIKSHSMFDEIE 399
L R GR D + + G +IL + K+ + D+++
Sbjct: 368 LRRFGRFDREVDIGVPDAEGRLEILRIH---TKNMKLADDVD 406
Score = 53 (23.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 18/67 (26%), Positives = 38/67 (56%)
Query: 360 LRPGRMDMHIHMSYLTPGGFKILAFNYLKIKS--HSMFDEIEELIKEVEVTPAEEFMKSE 417
L PG +D++ ++ +T G F +Y+ +S ++ D IE +K ++ +E +K+E
Sbjct: 677 LEPG-LDLN-EIAKITHG-FSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTE 733
Query: 418 DADVALN 424
D D+ ++
Sbjct: 734 DVDMKVD 740
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 135 (52.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 45/177 (25%), Positives = 84/177 (47%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA-- 262
T+D + +K L + ++ V + Y + G A +G L +GPPGTGK+ L A+A
Sbjct: 486 TWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATE 545
Query: 263 ---NYLKF---DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGY 316
N++ ++ M +++ ++++D SI + GG +
Sbjct: 546 VSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELD-SIA---KARGGSH 601
Query: 317 DENN--SQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHM 371
+ S ++ LL +DG+ + ++ TN +++DPALLRPGR+D I++
Sbjct: 602 GDAGGASDRVVNQLLTEMDGM--NAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYV 656
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 55/222 (24%), Positives = 94/222 (42%)
Query: 193 CAADAINL-DHPSTFDTLAMDPV---LKQ-ALIDDLDRFVKRR-EFYSRVGKAWKRGYLL 246
C + IN D ++ + + D + KQ A I +L R + + +G +G L+
Sbjct: 195 CEGEPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILM 254
Query: 247 YGPPGTGKSSLIAAMANYL-KF-------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVI 298
YGPPGTGK+ + A+AN F +I + SI+ I
Sbjct: 255 YGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFI 314
Query: 299 EDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPA 358
++ID SI + + G + +S LL +DG+ +++ TN +DPA
Sbjct: 315 DEID-SIAPKRDKTNGEVERR----VVSQLLTLMDGM--KARSNVVVIAATNRPNSIDPA 367
Query: 359 LLRPGRMDMHIHMSYL-TPGGFKILAFNYLKIKSHSMFDEIE 399
L R GR D + + G +IL + K+ + D+++
Sbjct: 368 LRRFGRFDREVDIGVPDAEGRLEILRIH---TKNMKLADDVD 406
Score = 53 (23.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 18/67 (26%), Positives = 38/67 (56%)
Query: 360 LRPGRMDMHIHMSYLTPGGFKILAFNYLKIKS--HSMFDEIEELIKEVEVTPAEEFMKSE 417
L PG +D++ ++ +T G F +Y+ +S ++ D IE +K ++ +E +K+E
Sbjct: 677 LEPG-LDLN-EIAKITHG-FSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTE 733
Query: 418 DADVALN 424
D D+ ++
Sbjct: 734 DVDMKVD 740
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 138 (53.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 49/162 (30%), Positives = 77/162 (47%)
Query: 217 QALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLI---AAMAN--YLKF---D 268
Q L++ + + +E + +G +G L+YGPPGTGK+ L AA N YLK
Sbjct: 178 QELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQ 237
Query: 269 IYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDC-SIELENRQCGGGYDENNSQVTLSG 327
+ M +I+ I+++D + + + G + Q T+
Sbjct: 238 LVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSG---DREVQRTMLE 294
Query: 328 LLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
LLN +DG +SS + ++I TN + LDPALLR GR+D I
Sbjct: 295 LLNQLDG-FSSDANIKVIA-ATNRIDILDPALLRSGRLDRKI 334
>UNIPROTKB|E1C6S3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
GeneTree:ENSGT00570000078874 IPI:IPI00599182 EMBL:AADN02011792
EMBL:AADN02011793 Ensembl:ENSGALT00000017279 ArrayExpress:E1C6S3
Uniprot:E1C6S3
Length = 592
Score = 140 (54.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 70/225 (31%), Positives = 109/225 (48%)
Query: 162 KDKVLNK-YLPYVAERSKAIKETKKVIKLYSLCAADAIN--LDH-PST-FDTLAMDPVLK 216
K+ NK P A R K K+TK + S A +N +D P+ FD +A + K
Sbjct: 270 KNSRTNKPSTPTPAARKK--KDTKVFRNVDSNLANLILNEIVDSGPAVKFDDIAGQELAK 327
Query: 217 QALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIY--D 271
QAL + + R E ++ + +A RG LL+GPPG GK+ L +AA +N F+I
Sbjct: 328 QALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAAS 386
Query: 272 MEXXXXXXXXXXXXXXVSTGNR---SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGL 328
+ + SI+ I+++D S+ E R+ G +D + T L
Sbjct: 387 LTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLCERRE--GEHDASRRLKT-EFL 442
Query: 329 LNFVDGLWSSCGDERIIVF-TTNYKERLDPALLRPGRMDMHIHMS 372
+ F DG+ SS G++RI+V TN + LD A+LR R +++S
Sbjct: 443 IEF-DGVQSS-GEDRILVMGATNRPQELDDAVLR--RFTKRVYVS 483
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 138 (53.6 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 45/150 (30%), Positives = 71/150 (47%)
Query: 231 EFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKF---DIYDMEXXXXXXXXX 282
E + ++G +G LLYGPPGTGK+ A+AN +++ ++
Sbjct: 210 ERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVR 269
Query: 283 XXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDE 342
T I+ +++D +I G G D N Q T+ L+ +DG + G+
Sbjct: 270 ELFEMARTKKACIIFFDEVD-AIGGARFDDGAGGD-NEVQRTMLELITQLDG-FDPRGNI 326
Query: 343 RIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
+++ F TN LDPALLRPGR+D + S
Sbjct: 327 KVM-FATNRPNTLDPALLRPGRIDRKVEFS 355
Score = 42 (19.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 63 IEQSEGFSVNEIYQAAELYLSTRITPSIQQLRVSQAP 99
IE+ V+ +L L RI PS+ + V + P
Sbjct: 145 IEEGMRVGVDRHKYEIQLPLPPRIDPSVTMMTVEEKP 181
>UNIPROTKB|F1NCJ3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001578 "microtubule
bundle formation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0007109 "cytokinesis, completion of separation" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005768
GO:GO:0051260 Pfam:PF04212 GO:GO:0006888 GO:GO:0030496
GO:GO:0007109 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0034214 GeneTree:ENSGT00570000078874
OMA:HKSTPKT EMBL:AADN02011792 EMBL:AADN02011793 IPI:IPI00821045
Ensembl:ENSGALT00000037930 ArrayExpress:F1NCJ3 Uniprot:F1NCJ3
Length = 600
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 70/225 (31%), Positives = 109/225 (48%)
Query: 162 KDKVLNK-YLPYVAERSKAIKETKKVIKLYSLCAADAIN--LDH-PST-FDTLAMDPVLK 216
K+ NK P A R K K+TK + S A +N +D P+ FD +A + K
Sbjct: 278 KNSRTNKPSTPTPAARKK--KDTKVFRNVDSNLANLILNEIVDSGPAVKFDDIAGQELAK 335
Query: 217 QALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIY--D 271
QAL + + R E ++ + +A RG LL+GPPG GK+ L +AA +N F+I
Sbjct: 336 QALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAAS 394
Query: 272 MEXXXXXXXXXXXXXXVSTGNR---SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGL 328
+ + SI+ I+++D S+ E R+ G +D + T L
Sbjct: 395 LTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLCERRE--GEHDASRRLKT-EFL 450
Query: 329 LNFVDGLWSSCGDERIIVF-TTNYKERLDPALLRPGRMDMHIHMS 372
+ F DG+ SS G++RI+V TN + LD A+LR R +++S
Sbjct: 451 IEF-DGVQSS-GEDRILVMGATNRPQELDDAVLR--RFTKRVYVS 491
>FB|FBgn0035443 [details] [associations]
symbol:CG12010 species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
Length = 736
Score = 141 (54.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 52/202 (25%), Positives = 88/202 (43%)
Query: 206 FDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY- 264
F+ + LK+ L + +++ ++R G + +G LLYGPPG K+++ +A
Sbjct: 468 FEVIGGMEALKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKCLAKEA 527
Query: 265 -LKF------DIYDMEXXXXXXXXXXXXXXVSTGNRSILVIEDIDCSIELENRQCGGGYD 317
+ F ++Y ++ +++ID + GGG
Sbjct: 528 DMTFIATSAAEVYSPYVGCAERFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSSGGGGG 587
Query: 318 ENNSQVTLSGLLNFVDGLWSSCGDERIIVFT-TNYKERLDPALLRPGRMDMHIHMSYLTP 376
+ ++ LS LL ++G+ + I+V TN + +D ALLRPGR D IH+ P
Sbjct: 588 QVQLRI-LSTLLTEMNGIVGGGSQQHILVVAATNRPDMIDDALLRPGRFDKLIHVP--AP 644
Query: 377 GGFKILAFNYLKIKSHSM-FDE 397
LA LK+ S M F E
Sbjct: 645 DEKSRLAL--LKLHSQRMPFHE 664
>UNIPROTKB|Q5ZK92 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0043014
"alpha-tubulin binding" evidence=ISS] [GO:0048487 "beta-tubulin
binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 HSSP:O75351
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
OrthoDB:EOG4NZTTF EMBL:EU849599 EMBL:EU849600 EMBL:AJ720192
IPI:IPI00599182 IPI:IPI00923811 RefSeq:NP_001026232.1
UniGene:Gga.21964 ProteinModelPortal:Q5ZK92 SMR:Q5ZK92
STRING:Q5ZK92 GeneID:421481 KEGG:gga:421481 InParanoid:Q5ZK92
NextBio:20824244 Uniprot:Q5ZK92
Length = 613
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 70/225 (31%), Positives = 109/225 (48%)
Query: 162 KDKVLNK-YLPYVAERSKAIKETKKVIKLYSLCAADAIN--LDH-PST-FDTLAMDPVLK 216
K+ NK P A R K K+TK + S A +N +D P+ FD +A + K
Sbjct: 291 KNSRTNKPSTPTPAARKK--KDTKVFRNVDSNLANLILNEIVDSGPAVKFDDIAGQELAK 348
Query: 217 QALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIY--D 271
QAL + + R E ++ + +A RG LL+GPPG GK+ L +AA +N F+I
Sbjct: 349 QALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAAS 407
Query: 272 MEXXXXXXXXXXXXXXVSTGNR---SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGL 328
+ + SI+ I+++D S+ E R+ G +D + T L
Sbjct: 408 LTSKYVGEGEKLVRALFAVARELQPSIIFIDEVD-SLLCERRE--GEHDASRRLKT-EFL 463
Query: 329 LNFVDGLWSSCGDERIIVF-TTNYKERLDPALLRPGRMDMHIHMS 372
+ F DG+ SS G++RI+V TN + LD A+LR R +++S
Sbjct: 464 IEF-DGVQSS-GEDRILVMGATNRPQELDDAVLR--RFTKRVYVS 504
>DICTYBASE|DDB_G0272777 [details] [associations]
symbol:DDB_G0272777 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
Length = 738
Score = 141 (54.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 53/202 (26%), Positives = 89/202 (44%)
Query: 178 KAIKETKKVIKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVG 237
K KE K IK +L D + + + +D + +K+ ++ +K ++ + R+
Sbjct: 459 KIFKEALKFIKPSTLINFD-VTVQNVK-WDRIGGYKQVKERFRQLIEWPLKYQDTFKRLS 516
Query: 238 KAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKF---DIYDMEXXXXXXXXXXXXXXVS 289
G LL+GP G GKS ++ A+A N++ DIY
Sbjct: 517 LNNSSGLLLHGPSGCGKSLMVKAIATEMSINFISIKGSDIYSKWLGESERIIRDLFKSAR 576
Query: 290 TGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTT 349
+ I+ ++ID S+ L D S+ LS LLN +DG+ + ++ T
Sbjct: 577 LSSPCIMFFDEID-SLTLSRGSGDDNEDGGTSKRILSQLLNEMDGI--QVKSQIFLIGCT 633
Query: 350 NYKERLDPALLRPGRMDMHIHM 371
N + +D ALLRPGR + IH+
Sbjct: 634 NSIQSIDSALLRPGRFESLIHI 655
WARNING: HSPs involving 162 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 455 429 0.00085 118 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 412
No. of states in DFA: 610 (65 KB)
Total size of DFA: 247 KB (2134 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.57u 0.11s 36.68t Elapsed: 00:00:02
Total cpu time: 36.62u 0.11s 36.73t Elapsed: 00:00:02
Start: Mon May 20 23:24:17 2013 End: Mon May 20 23:24:19 2013
WARNINGS ISSUED: 2