BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047029
(455 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P6Q3|BCS1_SCHPO Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1
Length = 449
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 128/223 (57%), Gaps = 10/223 (4%)
Query: 184 KKVIKLYSLCAADAINLDHPST---FDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAW 240
K +Y+ A + HP + ++ ++ +K+ + DD+ F++ ++Y G +
Sbjct: 182 KNKTTIYTAWATEWKPFGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPY 241
Query: 241 KRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSD-LRRLLVSTGNRSILVIE 299
+RGYLLYGPPG+GK+S + A+A L +DI + LA D L LL + ++++++E
Sbjct: 242 RRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLE 301
Query: 300 DIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPAL 359
D+D + + R G+ N VT SGLLN +DG+ SS DERII TTN+ E+LDPAL
Sbjct: 302 DVDSAFQGRERSGEVGFHAN---VTFSGLLNALDGVTSS--DERIIFMTTNHPEKLDPAL 356
Query: 360 LRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEELI 402
+RPGR+D+ ++ TP + + F S M D++ +++
Sbjct: 357 VRPGRVDVKAYLGNATPEQVREM-FTRFYGHSPEMADDLSDIV 398
>sp|P32839|BCS1_YEAST Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2
Length = 456
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 130/231 (56%), Gaps = 20/231 (8%)
Query: 155 LSFSKLFKDK-----VLNKYLPYVAERSKAIKETKKVIKLYSLCAADAINLDHPST---F 206
++ + L++DK +LN+ + A+K T+ +Y+ + P
Sbjct: 172 VTLTTLYRDKHLFDDILNE------AKDIALKTTEGKTVIYTSFGPEWRKFGQPKAKRML 225
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK 266
++ +D +K+ ++DD+ F+K ++YS G ++RGYLLYGPPG+GK+S I A+A L
Sbjct: 226 PSVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELD 285
Query: 267 FDIYDMELASLRSNSD-LRRLLVSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTL 325
++I + L+ D L L+ + RSIL++EDID + N++ G +S VT
Sbjct: 286 YNICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAF---NKRSQTGEQGFHSSVTF 342
Query: 326 SGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTP 376
SGLLN +DG+ SS +E I TTN+ E+LD A++RPGR+D + + TP
Sbjct: 343 SGLLNALDGVTSS--EETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATP 391
>sp|Q54DY9|BCS1B_DICDI Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum
GN=bcsl1b PE=3 SV=1
Length = 458
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 118/220 (53%), Gaps = 31/220 (14%)
Query: 181 KETKKVIKLYSLCAADAINLDHPS---TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVG 237
KE K + +Y+ D HP ++ +D + +I D+ +F+ ++Y+ G
Sbjct: 179 KEEGKTL-IYTSMGTDWRRFGHPRRKRPISSVILDKGKSELIIQDVKKFLNNSDWYNDRG 237
Query: 238 KAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLR-SNSDLRRLLVSTGNRSIL 296
++RGYLLYGPPGTGKSS I A+A L+ I + LA S++ L +LL + RSI+
Sbjct: 238 IPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSDTSLNQLLATAPQRSII 297
Query: 297 VIEDIDCSIELENR--------------QCGG----GYDEN------NSQVTLSGLLNFV 332
++EDID +I+ N GG GY N S +T SGLLN +
Sbjct: 298 LLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPSVSSGGSALTFSGLLNAL 357
Query: 333 DGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
DG+ +S G RI+ TTN+ E+LD L+RPGR+D+ I +
Sbjct: 358 DGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIG 395
>sp|Q7ZV60|BCS1_DANRE Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2
Length = 420
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 104/165 (63%), Gaps = 9/165 (5%)
Query: 208 TLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKF 267
++ ++ + + ++DD+ F+ ++Y+ G ++RGYLLYGPPG GKSS I A+A L +
Sbjct: 190 SVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGY 249
Query: 268 DIYDMELASLRSNSD--LRRLLVSTGNRSILVIEDIDCSI---ELENRQCGGGYDENNSQ 322
I M L+ RS SD L LL +SI+++ED+D + EL + Y + +
Sbjct: 250 SICLMSLSD-RSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRELLPTENPLAY-QGMGR 307
Query: 323 VTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDM 367
+T SGLLN +DG+ SS + RI+ TTN+ ERLDPAL+RPGR+D+
Sbjct: 308 LTFSGLLNALDGVASS--EARIVFMTTNFIERLDPALVRPGRVDL 350
>sp|Q7ZTL7|BCS1_XENLA Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1
Length = 419
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 116/206 (56%), Gaps = 9/206 (4%)
Query: 176 RSKAIKETKKVIKLYSLCAADAINLDHPS---TFDTLAMDPVLKQALIDDLDRFVKRREF 232
R A+K+ +Y+ A+ P ++ ++ + + ++ D+ F++ ++
Sbjct: 155 RELALKQQVGKTVMYNAVGAEWRQFGFPRRRRPLSSVVLEQGISEKIVQDVKGFIENPKW 214
Query: 233 YSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDI-YDMELASLRSNSDLRRLLVSTG 291
YS G ++RGYLLYGPPG GKSS I A+A L++ I S S+ L LL
Sbjct: 215 YSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSDDRLNHLLSVAP 274
Query: 292 NRSILVIEDIDCSIELE--NRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTT 349
+SI+++ED+D + N+Q Y + ++T SGLLN +DG+ S+ + RI+ TT
Sbjct: 275 QQSIILLEDVDAAFVSRDLNKQNPTAY-QGMGRLTFSGLLNALDGVAST--EARIVFMTT 331
Query: 350 NYKERLDPALLRPGRMDMHIHMSYLT 375
N+ +RLDPAL+RPGR+D+ ++ + T
Sbjct: 332 NHIDRLDPALIRPGRVDVKQYVGHCT 357
>sp|Q9CZP5|BCS1_MOUSE Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1
Length = 418
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 131/247 (53%), Gaps = 17/247 (6%)
Query: 176 RSKAIKETKKVIKLYSLCAADAINLDHPS---TFDTLAMDPVLKQALIDDLDRFVKRREF 232
R+ A+++ + +Y+ ++ +P D++ + L ++ D+ F+ ++
Sbjct: 155 RALALQQEEGKTVMYTAVGSEWRTFGYPRRRRPLDSVVLQQGLADRIVKDIREFIDNPKW 214
Query: 233 YSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDI-YDMELASLRSNSDLRRLLVSTG 291
Y G ++RGYLLYGPPG GKSS I A+A L+ I S S+ L LL
Sbjct: 215 YIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAP 274
Query: 292 NRSILVIEDIDCS-----IELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIV 346
+S++++ED+D + + +EN G ++T SGLLN +DG+ S+ + RI+
Sbjct: 275 QQSLVLLEDVDAAFLSRDLAVENPIKYQGL----GRLTFSGLLNALDGVAST--EARIVF 328
Query: 347 FTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKSHSMFDEIEELIKEV- 405
TTNY +RLDPAL+RPGR+D+ ++ Y + + + ++ S+ + E + +
Sbjct: 329 MTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLKAT 388
Query: 406 -EVTPAE 411
E++PA+
Sbjct: 389 SEISPAQ 395
>sp|Q54HY8|BCS1A_DICDI Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum
GN=bcs1la PE=3 SV=1
Length = 421
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Query: 215 LKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMEL 274
LK LI+D+ F+ +Y G ++RGYLLYG PG GKSSLI A+A L DI + L
Sbjct: 195 LKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSL 254
Query: 275 ASLR-SNSDLRRLLVSTGNRSILVIEDIDCSIE--LENRQCGGGYDENNSQVTLSGLLNF 331
+S + + LL + +SIL+IEDID + + +N NN+ +T SGLLN
Sbjct: 255 SSKDIDDKQINHLLNNAPPKSILLIEDIDAAFKSHRDNVDSNNNNSNNNNSLTYSGLLNA 314
Query: 332 VDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLT 375
+DG+ S G RI+ TTN E LD AL+R GR+D+ I +S T
Sbjct: 315 LDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKVSNAT 356
>sp|Q9Y276|BCS1_HUMAN Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1
Length = 419
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 115/210 (54%), Gaps = 17/210 (8%)
Query: 176 RSKAIKETKKVIKLYSLCAADAINLDHPSTFDTLAMDPVLKQALID----DLDRFVKRRE 231
R A+++ + +Y+ ++ +P L VL+Q L D D+ F+ +
Sbjct: 155 RELALQQEEGKTVMYTAVGSEWRPFGYPRRRRPLN-SVVLQQGLADRIVRDVQEFIDNPK 213
Query: 232 FYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDI-YDMELASLRSNSDLRRLLVST 290
+Y+ G ++RGYLLYGPPG GKSS I A+A L+ I S S+ L LL
Sbjct: 214 WYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVA 273
Query: 291 GNRSILVIEDIDCS-----IELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERII 345
+S++++ED+D + + +EN G ++T SGLLN +DG+ S+ + RI+
Sbjct: 274 PQQSLVLLEDVDAAFLSRDLAVENPVKYQGL----GRLTFSGLLNALDGVAST--EARIV 327
Query: 346 VFTTNYKERLDPALLRPGRMDMHIHMSYLT 375
TTN+ +RLDPAL+RPGR+D+ ++ Y +
Sbjct: 328 FMTTNHVDRLDPALIRPGRVDLKEYVGYCS 357
>sp|Q5E9H5|BCS1_BOVIN Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1
Length = 419
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 115/209 (55%), Gaps = 15/209 (7%)
Query: 176 RSKAIKETKKVIKLYSLCAADAINLDHPS---TFDTLAMDPVLKQALIDDLDRFVKRREF 232
R A+++ + +Y+ ++ +P +++ ++ + + ++ D+ F+ ++
Sbjct: 155 RELALQQEEGKTVMYTAVGSEWRPFGYPRRRRPLNSVVLEQGVTERIVRDIREFIDNPKW 214
Query: 233 YSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDI-YDMELASLRSNSDLRRLLVSTG 291
Y G ++RGYLLYGPPG GKSS I A+A L+ I S S+ L LL
Sbjct: 215 YIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDDRLNHLLSVAP 274
Query: 292 NRSILVIEDIDCS-----IELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIV 346
+S++++ED+D + + EN G ++T SGLLN +DG+ S+ + RI+
Sbjct: 275 QQSLVLLEDVDAAFLSRDLAAENPIKYQGL----GRLTFSGLLNALDGVAST--EARIVF 328
Query: 347 FTTNYKERLDPALLRPGRMDMHIHMSYLT 375
TTN+ +RLDPAL+RPGR+DM ++ + +
Sbjct: 329 MTTNHIDRLDPALIRPGRVDMKEYVGHCS 357
>sp|Q7URM7|FTSH2_RHOBA ATP-dependent zinc metalloprotease FtsH 2 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH2 PE=3 SV=1
Length = 728
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 108/218 (49%), Gaps = 34/218 (15%)
Query: 201 DHPSTFDTLAMDPVLKQAL--IDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLI 258
D P+TF+ +A +++A+ + ++ F+K E Y +G +G LL GPPGTGK+ L
Sbjct: 245 DLPTTFEDVAG---IEEAVDEVREVVDFLKNSEKYQSLGGRIPKGVLLVGPPGTGKTLLA 301
Query: 259 AAMANYLKFDIYDMELASLRSNSDLRRLLVSTG------------NRS--ILVIEDIDCS 304
A+A + + S SD + V G NR+ I+ I+++D
Sbjct: 302 KAIAGEAGVPFFSL------SGSDFVEMFVGVGAARVRDMFTQAVNRAPCIIFIDELDAL 355
Query: 305 IELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGR 364
+ + GG+DE + TL+ LL +DG S+ G I+V TN E LDPALLRPGR
Sbjct: 356 GKSRSGSVVGGHDER--EQTLNALLVEMDGFDSNSG--VIVVAATNRPETLDPALLRPGR 411
Query: 365 MDMHIHMSYLTPGGF-KILAFNYLKIKSHSMFDEIEEL 401
D H+ + G +ILA + +K DE EL
Sbjct: 412 FDRHVLVDRPDVAGREEILAVHVKNVK----LDETVEL 445
>sp|Q2SF13|FTSH_HAHCH ATP-dependent zinc metalloprotease FtsH OS=Hahella chejuensis
(strain KCTC 2396) GN=ftsH PE=3 SV=1
Length = 619
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 204 STFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
+TFD +A K+ + +L +++ + + RVG RG LL GPPGTGK+ L A+A
Sbjct: 173 TTFDEVAGQTNAKRE-VQELVEYLRDPDRFHRVGALAPRGVLLMGPPGTGKTLLARALAG 231
Query: 264 YLKFDIYDMELASL------RSNSDLRRL--LVSTGNRSILVIEDIDCSIELENRQCGGG 315
+ Y M + S +R+L + + SI+ I+++D GGG
Sbjct: 232 EAGVNFYPMSASEFIEVFVGVGASRVRQLFKIAKENSPSIIFIDELDSVGRTRGAGYGGG 291
Query: 316 YDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
+DE TL+ +L +DG + D I++ TN + LDPAL+RPGR D H+
Sbjct: 292 HDEREQ--TLNQILAEMDGF--AGHDAVIVLAATNRPDVLDPALMRPGRFDRHV 341
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 87/179 (48%), Gaps = 25/179 (13%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TFD +A +K+ L + +D F+K + Y +G +G LLYGPPGTGK+ L A+A
Sbjct: 155 TFDDVAGIDEVKEELAEIVD-FLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGE 213
Query: 265 LKFDIYDMELASLRSNSDLRRLLVSTG--------------NRSILVIEDIDCSIELENR 310
+ + S SD + V G + I+ I++ID
Sbjct: 214 AGVPFFSI------SGSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDAVGRQRGA 267
Query: 311 QCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
GGG+DE TL+ LL +DG ++ G II+ TN + LDPALLRPGR D I
Sbjct: 268 GYGGGHDEREQ--TLNQLLVEMDGFSANEGI--IIIAATNRPDVLDPALLRPGRFDRQI 322
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 42/220 (19%)
Query: 167 NKYLPYVAERSKAIKETKKVIKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRF 226
++ + + ++K + E KK K + AD KQ L++ ++ F
Sbjct: 143 SRVMNFGKSKAKMVNEDKKKAKFKDVAGADE-----------------EKQELVEVVE-F 184
Query: 227 VKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLRRL 286
+K +S +G +G LL GPPGTGK+ L A+A + + S SD +
Sbjct: 185 LKDPRKFSAIGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSI------SGSDFVEM 238
Query: 287 LVSTGNRS--------------ILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFV 332
V G I+ I++ID GGG+DE + TL+ LL +
Sbjct: 239 FVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDER--EQTLNQLLVEM 296
Query: 333 DGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
DG ++ G II+ TN + LDPALLRPGR D I ++
Sbjct: 297 DGFSANEG--IIIIAATNRADILDPALLRPGRFDRQIQVN 334
>sp|B3DY14|FTSH2_METI4 ATP-dependent zinc metalloprotease FtsH 2 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH2 PE=3 SV=1
Length = 641
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 220 IDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRS 279
+ +L F+K + + ++G +G L+ GPPGTGK+ L A+A + + S
Sbjct: 165 VQELVEFLKDPKKFQKLGGRIPKGVLMVGPPGTGKTLLAKAIAGEADVPFFSI------S 218
Query: 280 NSDLRRLLVSTGNRS--------------ILVIEDIDCSIELENRQCGGGYDENNSQVTL 325
SD + V G I+ I++ID GGG+DE TL
Sbjct: 219 GSDFVEMFVGVGASRVRDMFEQARRHAPCIVFIDEIDAVGRARGTGLGGGHDEREQ--TL 276
Query: 326 SGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
+ LL +DG+ S G I++ TN K+ LDPALLRPGR D + ++
Sbjct: 277 NALLVEMDGIESQEG--VIVIAATNRKDVLDPALLRPGRFDREVRVN 321
>sp|Q6M2F0|FTSH_CORGL ATP-dependent zinc metalloprotease FtsH OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=ftsH PE=3 SV=1
Length = 853
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 233 YSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLRRLLVSTG- 291
Y +G RG LLYGPPGTGK+ L A+A Y + S SD + V G
Sbjct: 190 YEALGAKIPRGVLLYGPPGTGKTLLARAVAGEAGVPFYSI------SGSDFVEMFVGVGA 243
Query: 292 -------------NRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSS 338
+ I+ +++ID GGG+DE + TL+ LL +DG
Sbjct: 244 SRVRDLFKQAKENSPCIIFVDEIDAVGRARGSGMGGGHDER--EQTLNQLLVEMDGFGDR 301
Query: 339 CGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
G I++ TN + LDPALLRPGR D I ++
Sbjct: 302 QG--VILMAATNRPDVLDPALLRPGRFDRQIPVT 333
>sp|P46469|FTSH_LACLA ATP-dependent zinc metalloprotease FtsH OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=ftsH PE=3 SV=1
Length = 695
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELA 275
KQ L++ +D F+K + Y +G G LL GPPGTGK+ L A+A Y +
Sbjct: 202 KQELVEVVD-FLKNPKKYHDLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFYSI--- 257
Query: 276 SLRSNSDLRRLLVSTGNR--------------SILVIEDIDCSIELENRQCGGGYDENNS 321
S SD + V G SI+ I++ID GGG DE
Sbjct: 258 ---SGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAVGRQRGAGLGGGNDER-- 312
Query: 322 QVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
+ TL+ LL +DG + G+ I++ TN + LDPALLRPGR D +
Sbjct: 313 EQTLNQLLVEMDG-FQDDGNSVIVIAATNRSDVLDPALLRPGRFDRKV 359
>sp|A0L4S0|FTSH_MAGSM ATP-dependent zinc metalloprotease FtsH OS=Magnetococcus sp.
(strain MC-1) GN=ftsH PE=3 SV=1
Length = 673
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 75/159 (47%), Gaps = 24/159 (15%)
Query: 225 RFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLR 284
+F+K + R+G +G LL GPPGTGK+ L A+A +++ S SD
Sbjct: 171 QFLKDPHKFQRLGGKIPKGVLLVGPPGTGKTLLARAIAGEANVPFFNL------SGSDFV 224
Query: 285 RLLVSTGNRS--------------ILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLN 330
+ V G I+ I++ID GGG+DE TL+ LL
Sbjct: 225 EMFVGVGAARVRDMFEQGKKNAPCIIFIDEIDAVGRHRGAGLGGGHDEREQ--TLNQLLV 282
Query: 331 FVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
+DG S+ G I+V TN + LDPALLRPGR D +
Sbjct: 283 EMDGFESTEG--VIMVAATNRPDVLDPALLRPGRFDRQV 319
>sp|D4HA34|FTSH_PROAS ATP-dependent zinc metalloprotease FtsH OS=Propionibacterium acnes
(strain SK137) GN=ftsH PE=3 SV=1
Length = 717
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 94/208 (45%), Gaps = 45/208 (21%)
Query: 217 QALIDDLDRFVKRREF------YSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIY 270
Q ID+L REF + RVG +G LLYGPPGTGK+ L A+A +
Sbjct: 173 QEAIDELQEI---REFLAEPAKFQRVGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFF 229
Query: 271 DMELASLRSNSDLRRLLVSTGNR--------------SILVIEDIDCSIELENRQCGGGY 316
+ S SD + V G +I+ I++ID GGG+
Sbjct: 230 SI------SGSDFVEMFVGVGASRVRDLFEQAKEAAPAIIFIDEIDAVGRHRGAGMGGGH 283
Query: 317 DENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTP 376
DE + TL+ LL +DG G I++ TN + LDPALLRPGR D I + P
Sbjct: 284 DER--EQTLNQLLVEMDGFDVHGG--VILIAATNRPDVLDPALLRPGRFDRQIAVE--AP 337
Query: 377 ---GGFKILAFNYLKIKSHS--MFDEIE 399
G KI LK+ +H M D+++
Sbjct: 338 DLDGRLKI-----LKVHAHGKPMADDVD 360
>sp|D2QZ34|FTSH_PIRSD ATP-dependent zinc metalloprotease FtsH OS=Pirellula staleyi
(strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=ftsH PE=3
SV=1
Length = 700
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 24/158 (15%)
Query: 226 FVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLRR 285
F++ E Y ++G +G LL GPPGTGK+ L A+A + + S SD
Sbjct: 240 FLRSPEKYQKLGGRIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSL------SGSDFVE 293
Query: 286 LLVSTGNRS--------------ILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNF 331
+ V G I+ I+++D + GG+DE + TL+ LL
Sbjct: 294 MFVGVGAARVRDMFQQAEAKAPCIIFIDELDALGKSRGAGIMGGHDER--EQTLNALLVE 351
Query: 332 VDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
+DG S+ G I++ TN E LDPALLRPGR D H+
Sbjct: 352 MDGFGSNSG--VIVMAATNRPETLDPALLRPGRFDRHV 387
>sp|A6TWP7|FTSH2_ALKMQ ATP-dependent zinc metalloprotease FtsH 2 OS=Alkaliphilus
metalliredigens (strain QYMF) GN=ftsH2 PE=3 SV=1
Length = 689
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 27/180 (15%)
Query: 205 TFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 263
TFD +A +D ++A +++L F+K + Y +G +G L+ GPPGTGK+ L A+A
Sbjct: 163 TFDDVAGLDE--EKAEVEELVDFLKNPKKYIELGARIPKGILMIGPPGTGKTYLTKAVAG 220
Query: 264 YLKFDIYDMELASLRSNSDLRRLLVSTGNRS--------------ILVIEDIDCSIELEN 309
+ + S SD + V G I+ I++ID
Sbjct: 221 EAGVPFFSI------SGSDFVEMFVGVGASRVRDLFEQAKKSAPCIIFIDEIDAVGRKRG 274
Query: 310 RQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
GGG+DE TL+ LL +DG + G IIV TN + LDPALLRPGR D +
Sbjct: 275 AGLGGGHDEREQ--TLNQLLVEMDGFGINEG--IIIVAATNRPDILDPALLRPGRFDRQV 330
>sp|Q9HGM3|YTA12_SCHPO Mitochondrial respiratory chain complexes assembly protein rca1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=yta12 PE=3 SV=1
Length = 773
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 225 RFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYD------MELASLR 278
+F+K +FY R+G RG +L GPPGTGK+ L A A +E+
Sbjct: 313 KFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGV 372
Query: 279 SNSDLRRLLVSTGNRS--ILVIEDIDCSIELENRQCGGGYDENNS-QVTLSGLLNFVDGL 335
S +R L + + I+ I++ID + R GG + N+ + TL+ LL +DG
Sbjct: 373 GPSRVRDLFATARKNAPCIIFIDEIDAIGKARGR--GGQFGSNDERESTLNQLLVEMDGF 430
Query: 336 WSSCGDERIIVFT-TNYKERLDPALLRPGRMDMHIHMSYLTPGG 378
SS E I+VF TN + LDPALLRPGR D I + GG
Sbjct: 431 TSS---EHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGG 471
>sp|A9KIG5|FTSH_CLOPH ATP-dependent zinc metalloprotease FtsH OS=Clostridium
phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
GN=ftsH PE=3 SV=1
Length = 577
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 24/170 (14%)
Query: 217 QALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELAS 276
++++ D+ F+K E YS +G +G +LYGPPGTGK+ + A+A Y M
Sbjct: 155 KSMVGDIIDFIKEPEKYSALGARMPKGVMLYGPPGTGKTLIAKAIATEAGVPFYAM---- 210
Query: 277 LRSNSDLRRLLVSTG--------------NRSILVIEDIDCSIELENRQCGGGYDENNSQ 322
S SD ++ V G ++++ I++ID + R DE +
Sbjct: 211 --SGSDFVQMYVGVGASRIRTLFNKAKKSEKAVIFIDEIDAIGKKRARSTSASNDERDQ- 267
Query: 323 VTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
TL+ LL + G + G +++ TN + LD ALLRPGR D I +
Sbjct: 268 -TLNALLTEMSGFHENKG--IVVIGATNRLDTLDEALLRPGRFDRQIEVG 314
>sp|Q9ZM66|FTSH_HELPJ ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain J99) GN=ftsH PE=3 SV=1
Length = 632
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 18/189 (9%)
Query: 193 CAADAINLDHPST-FDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPG 251
A IN + P+ F+ +A + K+ +++ +D F+K E Y+ +G +G LL GPPG
Sbjct: 155 SAKKLINAEKPNVRFNDMAGNEEAKEEVVEIVD-FLKYPERYANLGAKIPKGVLLVGPPG 213
Query: 252 TGKSSLIAAMANYLKFDIYDMELASL------RSNSDLRRLLVSTGNR--SILVIEDIDC 303
TGK+ L A+A + M +S S +R L + + SI+ I++ID
Sbjct: 214 TGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDA 273
Query: 304 SIELENRQCGG---GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALL 360
++R GG G DE + TL+ LL +DG S I++ TN E LDPAL+
Sbjct: 274 I--GKSRAAGGMISGNDER--EQTLNQLLAEMDGFGSENAP-VIVLAATNRPEILDPALM 328
Query: 361 RPGRMDMHI 369
RPGR D +
Sbjct: 329 RPGRFDRQV 337
>sp|Q7UUZ7|FTSH1_RHOBA ATP-dependent zinc metalloprotease FtsH 1 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH1 PE=3 SV=1
Length = 672
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TF+ +A +K L + +D F+K E + ++G +G LL GPPGTGK+ L A+A
Sbjct: 195 TFNDVAGLEGVKADLQEIVD-FLKTPEKFQKLGGQVPKGVLLNGPPGTGKTLLARAVAGE 253
Query: 265 LKFDIYDMELASLRSNSDLRRLLVSTG--------------NRSILVIEDIDCSIELENR 310
+ + + S+ ++ V G + SI+ I++ID
Sbjct: 254 ADVPFFSV------NGSEFIQMFVGVGASRVRDLFKTAKEQSPSIIFIDEIDAVGRQRGA 307
Query: 311 QCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIH 370
GGG+DE TL+ +L +DG + I++ TN + LDPALLRPGR D H+
Sbjct: 308 GLGGGHDEREQ--TLNQILGEMDGFGGAQA--VIVIAATNRPDVLDPALLRPGRFDRHVT 363
Query: 371 MSYLTPGG 378
+ T G
Sbjct: 364 VGRPTMKG 371
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 89/186 (47%), Gaps = 28/186 (15%)
Query: 223 LDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSD 282
+++ +K E + +VG +G LLYGPPGTGK+ L A+AN+ D + LA+ +
Sbjct: 195 VEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHA--DATFIRLAA----PE 248
Query: 283 LRRLLVSTGNR--------------SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGL 328
L + + G R SI+ I++ID R G + Q TL+ L
Sbjct: 249 LVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSG--DREVQRTLTQL 306
Query: 329 LNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLK 388
L +DG + D ++I TN K+ LDPALLRPGR D HI + G + K
Sbjct: 307 LAEMDG-FDPLDDIKVIA-ATNRKDILDPALLRPGRFDRHIKIPLPDEEG----RYEIFK 360
Query: 389 IKSHSM 394
I + M
Sbjct: 361 IHTRDM 366
>sp|P71408|FTSH_HELPY ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=ftsH PE=1 SV=2
Length = 632
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 18/189 (9%)
Query: 193 CAADAINLDHPST-FDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPG 251
A IN + P+ F+ +A + K+ +++ +D F+K E Y+ +G +G LL GPPG
Sbjct: 155 SAKKLINAEKPNVRFNDMAGNEEAKEEVVEIVD-FLKYPERYANLGAKIPKGVLLVGPPG 213
Query: 252 TGKSSLIAAMANYLKFDIYDMELASL------RSNSDLRRLLVSTGNR--SILVIEDIDC 303
TGK+ L A+A + M +S S +R L + + SI+ I++ID
Sbjct: 214 TGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDA 273
Query: 304 SIELENRQCGG---GYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALL 360
++R GG G DE + TL+ LL +DG S I++ TN E LDPAL+
Sbjct: 274 I--GKSRAAGGVVSGNDER--EQTLNQLLAEMDGFGSENAP-VIVLAATNRPEILDPALM 328
Query: 361 RPGRMDMHI 369
RPGR D +
Sbjct: 329 RPGRFDRQV 337
>sp|Q4L3G8|FTSH_STAHJ ATP-dependent zinc metalloprotease FtsH OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=ftsH PE=3 SV=1
Length = 727
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELA 275
KQ LI+ +D F+K + + ++G +G LL GPPGTGK+ L A+A + +
Sbjct: 174 KQELIEIVD-FLKDNKKFKQMGSRIPKGVLLVGPPGTGKTLLARAVAGEAGAPFFSI--- 229
Query: 276 SLRSNSDLRRLLVSTGNRS--------------ILVIEDIDCSIELENRQCGGGYDENNS 321
S SD + V G I+ I++ID GGG+DE
Sbjct: 230 ---SGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGVGGGHDER-- 284
Query: 322 QVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
+ TL+ LL +DG + G I++ TN + LDPALLRPGR D I +
Sbjct: 285 EQTLNQLLVEMDGFGENEG--IIMIAATNRPDILDPALLRPGRFDRQIQVG 333
>sp|C0ZPK5|FTSH_RHOE4 ATP-dependent zinc metalloprotease FtsH OS=Rhodococcus erythropolis
(strain PR4 / NBRC 100887) GN=ftsH PE=3 SV=1
Length = 854
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 226 FVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLRR 285
F++ Y +G RG LLYGPPGTGK+ L A+A + + S SD
Sbjct: 185 FLQNPARYQALGAKIPRGVLLYGPPGTGKTLLARAVAGEAGVPFFTI------SGSDFVE 238
Query: 286 LLVSTG--------------NRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNF 331
+ V G + I+ +++ID GGG+DE + TL+ LL
Sbjct: 239 MFVGVGASRVRDMFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDER--EQTLNQLLVE 296
Query: 332 VDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKS 391
+DG G I++ TN + LDPALLRPGR D I P G LA ++
Sbjct: 297 MDGFGDRTG--IILIAATNRPDILDPALLRPGRFDRQI------PVGAPDLAGRRAILRV 348
Query: 392 HSMFDEIE 399
HS I+
Sbjct: 349 HSQGKPID 356
>sp|C7MC16|FTSH_BRAFD ATP-dependent zinc metalloprotease FtsH OS=Brachybacterium faecium
(strain ATCC 43885 / DSM 4810 / NCIB 9860) GN=ftsH PE=3
SV=1
Length = 704
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 220 IDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRS 279
+D++ +F+ Y VG +G LLYGPPGTGK+ L A+A Y + S
Sbjct: 189 LDEIKQFLVDPGRYQAVGAKIPKGVLLYGPPGTGKTLLAKAVAGEANVPFYSI------S 242
Query: 280 NSDLRRLLVSTGNR--------------SILVIEDIDCSIELENRQCGGGYDENNSQVTL 325
SD + V G +I+ I++ID GGG+DE TL
Sbjct: 243 GSDFVEMFVGVGASRVRDLFNTAKENAPAIIFIDEIDAVGRHRGAGMGGGHDEREQ--TL 300
Query: 326 SGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
+ +L +DG + I++ TN + LDPALLRPGR D I
Sbjct: 301 NQMLVEMDGFEEN--QNVILIAATNRVDILDPALLRPGRFDRQI 342
>sp|B9MPK5|FTSH_CALBD ATP-dependent zinc metalloprotease FtsH OS=Caldicellulosiruptor
bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)
GN=ftsH PE=3 SV=1
Length = 616
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 94/217 (43%), Gaps = 42/217 (19%)
Query: 167 NKYLPYVAERSKAIKETKKVIKLYSLCAADAINLDHPSTFDTLAMDPVLKQALIDDLDRF 226
+K + + R+K I++ KK + + AD K+ L + +D F
Sbjct: 145 SKIMSFTKSRAKTIQDLKKKVTFADVAGADE-----------------EKEELKEVID-F 186
Query: 227 VKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLRRL 286
+K Y +G +G LL GPPGTGK+ L A+A + + S SD +
Sbjct: 187 LKNPRKYIELGARIPKGILLVGPPGTGKTLLAKAVAGEAGVPFFSI------SGSDFVEM 240
Query: 287 LVSTGNRS--------------ILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFV 332
V G ++ I++ID GGG+DE TL+ LL +
Sbjct: 241 FVGVGAARVRDLFDQAKRNAPCVVFIDEIDAVGRHRGAGLGGGHDEREQ--TLNQLLVEM 298
Query: 333 DGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
DG ++ G I++ TN + LDPALLRPGR D I
Sbjct: 299 DGFGTNEG--IIVMAATNRPDILDPALLRPGRFDRQI 333
>sp|P0C5C0|FTSH_MYCTU ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium
tuberculosis GN=ftsH PE=1 SV=1
Length = 760
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 28/199 (14%)
Query: 190 YSLCAADAINLDHPST--FDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLY 247
+ A ++ D P T D +D +++ + ++ F++ Y +G +G LLY
Sbjct: 145 FGKSRAKQLSKDMPKTTFADVAGVDEAVEE--LYEIKDFLQNPSRYQALGAKIPKGVLLY 202
Query: 248 GPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLRRLLVSTG--------------NR 293
GPPGTGK+ L A+A + + S SD + V G +
Sbjct: 203 GPPGTGKTLLARAVAGEAGVPFFTI------SGSDFVEMFVGVGASRVRDLFEQAKQNSP 256
Query: 294 SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKE 353
I+ +++ID GGG+DE + TL+ LL +DG G I++ TN +
Sbjct: 257 CIIFVDEIDAVGRQRGAGLGGGHDER--EQTLNQLLVEMDGFGDRAG--VILIAATNRPD 312
Query: 354 RLDPALLRPGRMDMHIHMS 372
LDPALLRPGR D I +S
Sbjct: 313 ILDPALLRPGRFDRQIPVS 331
>sp|A5U8T5|FTSH_MYCTA ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3
SV=1
Length = 760
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 28/199 (14%)
Query: 190 YSLCAADAINLDHPST--FDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLY 247
+ A ++ D P T D +D +++ + ++ F++ Y +G +G LLY
Sbjct: 145 FGKSRAKQLSKDMPKTTFADVAGVDEAVEE--LYEIKDFLQNPSRYQALGAKIPKGVLLY 202
Query: 248 GPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLRRLLVSTG--------------NR 293
GPPGTGK+ L A+A + + S SD + V G +
Sbjct: 203 GPPGTGKTLLARAVAGEAGVPFFTI------SGSDFVEMFVGVGASRVRDLFEQAKQNSP 256
Query: 294 SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKE 353
I+ +++ID GGG+DE + TL+ LL +DG G I++ TN +
Sbjct: 257 CIIFVDEIDAVGRQRGAGLGGGHDER--EQTLNQLLVEMDGFGDRAG--VILIAATNRPD 312
Query: 354 RLDPALLRPGRMDMHIHMS 372
LDPALLRPGR D I +S
Sbjct: 313 ILDPALLRPGRFDRQIPVS 331
>sp|P0A4V9|FTSH_MYCBO ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=ftsH PE=3 SV=1
Length = 760
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 28/199 (14%)
Query: 190 YSLCAADAINLDHPST--FDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLY 247
+ A ++ D P T D +D +++ + ++ F++ Y +G +G LLY
Sbjct: 145 FGKSRAKQLSKDMPKTTFADVAGVDEAVEE--LYEIKDFLQNPSRYQALGAKIPKGVLLY 202
Query: 248 GPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLRRLLVSTG--------------NR 293
GPPGTGK+ L A+A + + S SD + V G +
Sbjct: 203 GPPGTGKTLLARAVAGEAGVPFFTI------SGSDFVEMFVGVGASRVRDLFEQAKQNSP 256
Query: 294 SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKE 353
I+ +++ID GGG+DE + TL+ LL +DG G I++ TN +
Sbjct: 257 CIIFVDEIDAVGRQRGAGLGGGHDER--EQTLNQLLVEMDGFGDRAG--VILIAATNRPD 312
Query: 354 RLDPALLRPGRMDMHIHMS 372
LDPALLRPGR D I +S
Sbjct: 313 ILDPALLRPGRFDRQIPVS 331
>sp|A1AT11|FTSH_PELPD ATP-dependent zinc metalloprotease FtsH OS=Pelobacter propionicus
(strain DSM 2379) GN=ftsH PE=3 SV=1
Length = 623
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 216 KQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDM--- 272
KQ L + +D +++ + ++R+G +G LL GPPGTGK+ L A+A + +
Sbjct: 183 KQELKEVVD-YLRNPKQFARIGGKVPKGVLLVGPPGTGKTLLARAVAGEAGVAFFSISAS 241
Query: 273 ---ELASLRSNSDLRRLLVST--GNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSG 327
E+ S +R L + SI+ I+++D GGG+DE TL+
Sbjct: 242 QFIEMFVGVGASRVRDLFTNAKKAAPSIVFIDELDAVGRSRGAGFGGGHDEREQ--TLNQ 299
Query: 328 LLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
LL+ +DG +E I++ TN + LDPALLRPGR D H+
Sbjct: 300 LLSEMDGF--DQHEEVIVLAATNRPDVLDPALLRPGRFDRHV 339
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 29/199 (14%)
Query: 201 DHPS-TF-DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLI 258
D P TF D D +++ + ++ F++ + + ++G +G LL GPPGTGK+ L
Sbjct: 182 DQPKVTFADVAGADEAVQE--LTEIKEFLENPQKFQKLGARIPKGALLVGPPGTGKTLLA 239
Query: 259 AAMANYLKFDIYDMELASLRSNSDLRRLLVSTG--------------NRSILVIEDIDCS 304
A+A + + S SD + V G + I+ +++ID
Sbjct: 240 RAVAGEAGVPFFSI------SGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAV 293
Query: 305 IELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGR 364
GGG+DE TL+ LL +DG S G I++ TN + LDPALLRPGR
Sbjct: 294 GRQRGAGLGGGHDEREQ--TLNQLLVEMDGFDSKSGI--IMLAATNRPDILDPALLRPGR 349
Query: 365 MDMHIHMSYLT-PGGFKIL 382
D I + PG KIL
Sbjct: 350 FDRQIVVDRPDLPGRIKIL 368
>sp|Q8W585|FTSH8_ARATH ATP-dependent zinc metalloprotease FTSH 8, chloroplastic
OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1
Length = 685
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TFD +A KQ ++ ++ F+K+ E ++ VG +G LL GPPGTGK+ L A+A
Sbjct: 218 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 276
Query: 265 LKFDIYDMELASLRSNSDLRRLLVSTGNRS--------------ILVIEDIDCSIELENR 310
+ + S S+ + V G I+ +++ID
Sbjct: 277 AGVPFFSI------SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGT 330
Query: 311 QCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIH 370
GGG DE TL+ LL +DG + G I+V TN + LD ALLRPGR D +
Sbjct: 331 GIGGGNDEREQ--TLNQLLTEMDGFEGNTG--VIVVAATNRADILDSALLRPGRFDRQVS 386
Query: 371 M 371
+
Sbjct: 387 V 387
>sp|D0LWB8|FTSH_HALO1 ATP-dependent zinc metalloprotease FtsH OS=Haliangium ochraceum
(strain DSM 14365 / JCM 11303 / SMP-2) GN=ftsH PE=3 SV=1
Length = 682
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 220 IDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRS 279
++++ F+K + ++R+G +G L+ GPPGTGK+ L A+A + + S
Sbjct: 204 VEEIIAFLKDPKKFTRLGGRIPKGVLMMGPPGTGKTLLARAIAGEAGVPFFSI------S 257
Query: 280 NSDLRRLLVSTGNRS--------------ILVIEDIDCSIELENRQCGGGYDENNSQVTL 325
SD + V G I+ I++ID GGG+DE TL
Sbjct: 258 GSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDEIDAVGRHRGAGLGGGHDEREQ--TL 315
Query: 326 SGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
+ LL +DG S+ D I++ TN + LDPALLRPGR D I
Sbjct: 316 NQLLVEMDGFESN--DGVILIAATNRPDVLDPALLRPGRFDRRI 357
>sp|C7N1I1|FTSH_SLAHD ATP-dependent zinc metalloprotease FtsH OS=Slackia
heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC
11029 / RHS 1) GN=ftsH PE=3 SV=1
Length = 783
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 233 YSRVGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIYDMELASL---RSNSDLRRL 286
Y ++G RG LL GPPGTGK+ L +A AN F I E + S +R L
Sbjct: 310 YQKLGAKIPRGCLLVGPPGTGKTLLARAVAGEANVPFFSISGSEFVEMFVGVGASRVRNL 369
Query: 287 L--VSTGNRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERI 344
SI+ I++ID GGG+DE + TL+ LL +DG + D +
Sbjct: 370 FEQAKEAAPSIIFIDEIDAVGRQRGTGLGGGHDER--EQTLNQLLVEMDGFEKN--DAVV 425
Query: 345 IVFTTNYKERLDPALLRPGRMDMHI 369
++ TN + LDPALLRPGR D I
Sbjct: 426 LIAATNRVDVLDPALLRPGRFDRQI 450
>sp|C6V4R9|FTSH_NEORI ATP-dependent zinc metalloprotease FtsH OS=Neorickettsia risticii
(strain Illinois) GN=ftsH PE=3 SV=1
Length = 636
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 226 FVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLRR 285
F++ + + ++G +G LL GPPGTGK+ L A+A K + + S SD
Sbjct: 175 FLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEAKVPFFSI------SGSDFVE 228
Query: 286 LLVSTGNRSI--------------LVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNF 331
+ V G + + I++ID GGG DE TL+ LL
Sbjct: 229 MFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGGNDEREQ--TLNQLLVE 286
Query: 332 VDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGF-KILAFNYLKIK 390
+DG ++ G II+ TN + LDPALLRPGR D I +S G KIL + KI
Sbjct: 287 MDGFEANEG--VIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQKILEVHLKKIP 344
Query: 391 S 391
+
Sbjct: 345 T 345
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 105/232 (45%), Gaps = 32/232 (13%)
Query: 226 FVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLRR 285
F+K+ E ++ +G RG LL GPPGTGK+ L A+A + + S S+
Sbjct: 229 FLKQPEKFTAIGAKIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSI------SGSEFVE 282
Query: 286 LLVSTG-------------NRSILV-IEDIDCSIELENRQCGGGYDENNSQVTLSGLLNF 331
+ V G N LV I++ID GGG DE + TL+ LL
Sbjct: 283 MFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVGRQRGVGYGGGNDER--EQTLNQLLTE 340
Query: 332 VDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFK-ILAFNYLKIK 390
+DG + G I++ TN + LD ALLRPGR D + + Y G + ILA + K
Sbjct: 341 MDGFEGNSGI--IVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKK 398
Query: 391 SHSMFDEIEELIKEVEVTPAEEFMKSEDADVALNGLVDFLLRKKEQTMKCNE 442
H E +L TP F ++ A+V LN F R++++ + E
Sbjct: 399 LH----EEVQLAAIARRTPG--FTGADLANV-LNEAAIFTARRRKEAITMAE 443
>sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1
Length = 695
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 25/181 (13%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TFD +A KQ ++ ++ F+K+ E ++ VG +G LL GPPGTGK+ L A+A
Sbjct: 225 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGE 283
Query: 265 LKFDIYDMELASLRSNSDLRRLLVSTGNRS--------------ILVIEDIDCSIELENR 310
+ + S S+ + V G I+ +++ID
Sbjct: 284 AGVPFFSI------SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGT 337
Query: 311 QCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIH 370
GGG DE + TL+ LL +DG + G I+V TN + LD ALLRPGR D +
Sbjct: 338 GIGGGNDER--EQTLNQLLTEMDGFEGNTG--VIVVAATNRADILDSALLRPGRFDRQVS 393
Query: 371 M 371
+
Sbjct: 394 V 394
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 89/180 (49%), Gaps = 26/180 (14%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TFD +A KQ L + +D F+K + Y R+G +G LL GPPGTGK+ L A+A
Sbjct: 195 TFDDVAGIEEAKQELAEIVD-FLKNPQKYQRLGGTIPKGVLLIGPPGTGKTLLARAVAGE 253
Query: 265 LKFDIYDMELASLRSNSDLRRLLVSTGNRSILVI-----EDIDCSI---ELE--NRQCG- 313
+ M S S+ ++V G + + ++ C I EL+ R+ G
Sbjct: 254 AGVPFFSM------SGSEFVEMIVGVGAARVRELFQQAKKEAPCIIFVDELDAIGRRRGS 307
Query: 314 ----GGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
GG+DE TL+ LL +DG S G I++ TN + LDPALLRPGR D +
Sbjct: 308 SINVGGHDEREQ--TLNQLLVEMDGFDSRQG--VIVLAATNRPDVLDPALLRPGRFDRRV 363
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 84/183 (45%), Gaps = 25/183 (13%)
Query: 201 DHPSTFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAA 260
D TF+ +A K+ L ++ F+K + + +G +G LL GPPGTGK+ L A
Sbjct: 155 DKRVTFNDVAGADEEKEEL-QEIVEFLKYPKKFLELGARIPKGVLLVGPPGTGKTLLAKA 213
Query: 261 MANYLKFDIYDMELASLRSNSDLRRLLVSTGNRS--------------ILVIEDIDCSIE 306
+A + + S SD + V G I+ I++ID
Sbjct: 214 VAGEAGVPFFSI------SGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFIDEIDAVGR 267
Query: 307 LENRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMD 366
GGG+DE TL+ LL +DG S + I++ TN + LDPALLRPGR D
Sbjct: 268 QRGAGLGGGHDEREQ--TLNQLLVEMDGF--SVNEGIIVIAATNRPDILDPALLRPGRFD 323
Query: 367 MHI 369
HI
Sbjct: 324 RHI 326
>sp|A9BFL9|FTSH1_PETMO ATP-dependent zinc metalloprotease FtsH 1 OS=Petrotoga mobilis
(strain DSM 10674 / SJ95) GN=ftsH1 PE=3 SV=1
Length = 653
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 26/180 (14%)
Query: 207 DTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK 266
D +D VL + I+D+ +F+K + + +G +G LL GPPGTGK+ A+A
Sbjct: 180 DVAGIDEVLDE--IEDIVKFLKNPQEFQELGARMPKGTLLVGPPGTGKTLTARAIAGEAD 237
Query: 267 FDIYDMELASLRSNSDLRRLLVSTGNR--------------SILVIEDIDCSIELENRQC 312
Y S SD L V G +I+ I+++D
Sbjct: 238 VPFY------YASGSDFVELFVGVGASRVRDLFKTAKENAPAIIFIDELDAVGRQRGAGL 291
Query: 313 GGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
GGG DE + TL+ LL +DG +S G +++ TN + LD ALLRPGR D I +
Sbjct: 292 GGGNDER--EQTLNALLVELDGFDTSTG--VVVMAATNRPDVLDKALLRPGRFDKKIMVG 347
>sp|Q3A579|FTSH_PELCD ATP-dependent zinc metalloprotease FtsH OS=Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1) GN=ftsH PE=3 SV=1
Length = 646
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 85/179 (47%), Gaps = 25/179 (13%)
Query: 205 TFDTLAMDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 264
TF +A KQ L++ ++ F++ + + R+G RG LL GPPGTGK+ + A+A
Sbjct: 174 TFADVAGLDEAKQELMEIIE-FLRNPKKFMRLGAKAPRGVLLVGPPGTGKTLMARAVAGE 232
Query: 265 LKFDIYDMELASLRSNSDLRRLLVSTGNR--------------SILVIEDIDCSIELENR 310
+ + + S S + V G SI+ I+++D
Sbjct: 233 AEVPFFTI------SASQFIEMFVGVGASRVRDLFNNAKKNAPSIIFIDELDAVGRSRGT 286
Query: 311 QCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
GGG DE TL+ LL+ +DG DE I++ TN + LDPALLRPGR D +
Sbjct: 287 GLGGGNDEREQ--TLNQLLSEMDGF--EAHDEVIVMSATNRPDVLDPALLRPGRFDRQV 341
>sp|Q9CD58|FTSH_MYCLE ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium leprae
(strain TN) GN=ftsH PE=3 SV=1
Length = 787
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 233 YSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLRRLLVSTG- 291
Y +G +G LLYGPPGTGK+ L A+A + + S SD + V G
Sbjct: 188 YQTLGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTI------SGSDFVEMFVGVGA 241
Query: 292 -------------NRSILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNFVDGLWSS 338
+ I+ +++ID GGG+DE + TL+ LL +DG
Sbjct: 242 SRVRDLFDQAKQNSPCIIFVDEIDAVGRQRGTGLGGGHDER--EQTLNQLLVEMDGFGDR 299
Query: 339 CGDERIIVFTTNYKERLDPALLRPGRMDMHIHMS 372
G I++ TN + LDPALLRPGR D I +S
Sbjct: 300 AG--VILIAATNRPDILDPALLRPGRFDRQIPVS 331
>sp|A9EXK6|FTSH4_SORC5 ATP-dependent zinc metalloprotease FtsH 4 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH4 PE=3 SV=1
Length = 648
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
Query: 226 FVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLRSNSDLRR 285
F+K + + ++G +G L+ GPPGTGK+ L A+A + + S SD
Sbjct: 183 FLKDPKKFQKLGGRIPKGVLMMGPPGTGKTLLARAIAGEAGVPFFSI------SGSDFVE 236
Query: 286 LLVSTGNRS--------------ILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNF 331
+ V G I+ I++ID GGG+DE TL+ LL
Sbjct: 237 MFVGVGASRVRDLFEQGKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQ--TLNQLLVE 294
Query: 332 VDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHI 369
+DG S+ G IIV TN + LDPA+LRPGR D I
Sbjct: 295 MDGFESNEG--VIIVAATNRPDVLDPAILRPGRFDRRI 330
>sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana
GN=RPT6A PE=2 SV=1
Length = 419
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 29/206 (14%)
Query: 204 STFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA 262
ST+D + +D +K+ + + ++ +K E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 158 STYDMIGGLDQQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 263 NYLKFDIYDMELASLRSNSDLRRLLVSTGNR--------------SILVIEDIDCSIELE 308
++ + S S+L + + G+R SI+ +++ID SI
Sbjct: 217 HHTDCTFIRV------SGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSA 269
Query: 309 NRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMH 368
+ G G ++ Q T+ LLN +DG +S ++ ++ TN + LD ALLRPGR+D
Sbjct: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRK 327
Query: 369 IHMSYLTPGGFKILAFNYLKIKSHSM 394
I P + F+ LKI S M
Sbjct: 328 IEF----PNPNEESRFDILKIHSRKM 349
>sp|P54814|PRS8_MANSE 26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1
Length = 402
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 91/183 (49%), Gaps = 30/183 (16%)
Query: 227 VKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDMELASLR-SNSDLRR 285
VK E + +G A +G LLYGPPGTGK+ L A+A++ E +R S S+L +
Sbjct: 165 VKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH-------TECTFIRVSGSELVQ 217
Query: 286 LLVSTGNR--------------SILVIEDIDCSIELENRQCGGGYDENNSQVTLSGLLNF 331
+ G+R SI+ +++ID SI + G G D + Q T+ LLN
Sbjct: 218 KFIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSSRIESGSGGD-SEVQRTMLELLNQ 275
Query: 332 VDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMHIHMSYLTPGGFKILAFNYLKIKS 391
+DG ++ + ++ TN + LDPALLRPGR+D I P + + LKI S
Sbjct: 276 LDGFEATKNIK--VIMATNRIDILDPALLRPGRIDRKIEF----PPPNEEARLDILKIHS 329
Query: 392 HSM 394
M
Sbjct: 330 RKM 332
>sp|Q94BQ2|PRS8B_ARATH 26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana
GN=RPT6B PE=2 SV=1
Length = 419
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 29/206 (14%)
Query: 204 STFDTLA-MDPVLKQALIDDLDRFVKRREFYSRVGKAWKRGYLLYGPPGTGKSSLIAAMA 262
ST+D + +D +K+ + + ++ +K E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 158 STYDMIGGLDQQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 263 NYLKFDIYDMELASLRSNSDLRRLLVSTGNR--------------SILVIEDIDCSIELE 308
++ + S S+L + + G+R SI+ +++ID SI
Sbjct: 217 HHTDCTFIRV------SGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSA 269
Query: 309 NRQCGGGYDENNSQVTLSGLLNFVDGLWSSCGDERIIVFTTNYKERLDPALLRPGRMDMH 368
+ G G ++ Q T+ LLN +DG +S ++ ++ TN + LD ALLRPGR+D
Sbjct: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRIDRK 327
Query: 369 IHMSYLTPGGFKILAFNYLKIKSHSM 394
I P + F+ LKI S M
Sbjct: 328 IEF----PNPNEESRFDILKIHSRKM 349
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162,291,521
Number of Sequences: 539616
Number of extensions: 6817616
Number of successful extensions: 30698
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 192
Number of HSP's that attempted gapping in prelim test: 28722
Number of HSP's gapped (non-prelim): 1571
length of query: 455
length of database: 191,569,459
effective HSP length: 121
effective length of query: 334
effective length of database: 126,275,923
effective search space: 42176158282
effective search space used: 42176158282
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)