BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047036
(634 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P40781|CYPR4_CYNCA Protein CYPRO4 OS=Cynara cardunculus GN=CYPRO4 PE=2 SV=1
Length = 501
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/492 (78%), Positives = 433/492 (88%), Gaps = 9/492 (1%)
Query: 149 MFGDQRRIDFVDKGVWALKFFSDSEYRKFVTEFQDRLFENVYGLKATEENKMKVYGKEFI 208
MFGDQRR+DFVD GVWALKF D +YR+FVT FQ LFENVYGLKA++ENK+KVYGK+FI
Sbjct: 1 MFGDQRRVDFVDSGVWALKFMRDEDYREFVTRFQSCLFENVYGLKASDENKVKVYGKDFI 60
Query: 209 GWVKPEVADDSMWEDADDGLDKTPESVTPVRGNRDLLEEFEELA-NGGVQSLTLGALDNS 267
GWVKP+VADDSMWE DD L ++P +TPVRG+ DLLEEFEE A +GG+QS+ LGALDNS
Sbjct: 61 GWVKPDVADDSMWEKDDDELWRSPSKMTPVRGSNDLLEEFEEAASDGGIQSVALGALDNS 120
Query: 268 FLVSDLGLQVYRNYNRGIHNKGVSVRFDGGSSKIGS-------NSTPKKALLMRGETNMM 320
FLV+D G+QV +N++ GIH KGV V+FD G ++G N TP+KALLMRGETNM+
Sbjct: 121 FLVNDSGVQVVKNFSHGIHGKGVYVKFDNGGKRVGGSSSGGYSNLTPQKALLMRGETNML 180
Query: 321 LMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFL 380
LMSP K GKP + GV QLDIETGKIVTEWKFEKDGTDITMRDITNDTK SQLDPSESTFL
Sbjct: 181 LMSPAKAGKPHSTGVNQLDIETGKIVTEWKFEKDGTDITMRDITNDTKGSQLDPSESTFL 240
Query: 381 GLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSL 440
GLDDNRL QWDMRDR G+VQN+ DSPVLHWTQGHQFSRGTNFQ FA+TGDGSIVVGSL
Sbjct: 241 GLDDNRLSQWDMRDRRGMVQNIAHSDSPVLHWTQGHQFSRGTNFQSFATTGDGSIVVGSL 300
Query: 441 DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFSDKDGKT 500
DGKIRLYS TSMR AKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILIC+LF+DKDGKT
Sbjct: 301 DGKIRLYSTTSMRMAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICSLFTDKDGKT 360
Query: 501 KTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFS 560
KTGFSGRMGNKIPAPRLLKLTP+DSH AG +NK HGG FSWVTE+GKQERHLVATVGKFS
Sbjct: 361 KTGFSGRMGNKIPAPRLLKLTPVDSHTAGVNNKFHGGRFSWVTESGKQERHLVATVGKFS 420
Query: 561 VIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHDKF-AVTDSPEAPLVV 619
VIWDFQ+VKNS HECYRNQ+GLKSCYCYK++ KDESI+ES FM+DK+ AV DSPEAPLV+
Sbjct: 421 VIWDFQRVKNSGHECYRNQEGLKSCYCYKLMTKDESIIESLFMNDKYAAVGDSPEAPLVM 480
Query: 620 ATPMKVSSISLS 631
ATP K++S S+S
Sbjct: 481 ATPKKITSFSMS 492
>sp|Q1MTR3|VID27_SCHPO Vacuolar import and degradation protein 27 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=vid27 PE=1 SV=1
Length = 801
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 164/327 (50%), Gaps = 48/327 (14%)
Query: 265 DNSFLVSDLGLQVYRNYNRGIHNKGVSVR--FDGGSSKIGSNSTPKKALLMRGETNMMLM 322
D S++V + + V+++ + KG+ + + S+ G + P K +L +++++
Sbjct: 446 DRSYVVRNNKIGVFKH----VDEKGLKFQTALNNLSTPKGKSLRPSKLMLHNQDSSILFQ 501
Query: 323 SPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL 382
+ + P + + +DIE GKIV EWK D +T T D K +Q+ +E T +GL
Sbjct: 502 T---ENAPHS--LYHMDIEYGKIVDEWKVHDDVPLVTF---TPDNKFAQM-TAEQTLIGL 552
Query: 383 DDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDG 442
+N + + D R V+G+ V Q Q++ +F A+T +G I V S G
Sbjct: 553 SNNSIFRIDPR---------VEGNKLVAE--QFKQYATKNDFSSAATTENGYIAVASNKG 601
Query: 443 KIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFSDKDGKTKT 502
IRL+ + + AKTA P LG I VDVT G ++L T TY++LI D + K
Sbjct: 602 DIRLFDRIGV-NAKTALPALGEAIIGVDVTASGDFVLATCKTYILLI-------DTRIKE 653
Query: 503 G-FSGRMG-------NKIPAPRLLKLTPLDSHLAGTDNKIHGG-HFSWVTEN---GKQER 550
G ++GR+G +K P P+ L+L+P H+A ++ GG F+ N +E
Sbjct: 654 GRYAGRLGFERNFAKDKKPKPKRLQLSP--QHIAMMQRELKGGASFTPAKFNTGIDAKET 711
Query: 551 HLVATVGKFSVIWDFQQVKNSAHECYR 577
+V+++G F + W+ +VK + Y+
Sbjct: 712 TIVSSIGPFLISWNLDRVKRGFTDSYK 738
>sp|Q555V7|VID27_DICDI VID27-like protein OS=Dictyostelium discoideum GN=DDB_G0274813 PE=3
SV=1
Length = 938
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 159/349 (45%), Gaps = 61/349 (17%)
Query: 258 SLTLGALDNSFLVSDLGLQVYRNYNRGIHNKGVSVRFDGGSSKI----GSNSTPKKALLM 313
SL +G D S++V + V+ + GI +F+ + I G N +PKK +L
Sbjct: 593 SLIVGYKDKSYVVRGSTIGVFNTDDDGI-------KFNTAITNIKQKDGKNFSPKKMMLQ 645
Query: 314 RGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRD---ITNDTKSS 370
+ + +++++P K V ++D+ IV EW D+ R+ +TN S
Sbjct: 646 QQDQTLLMLNPEKKS-----NVYKMDLNRPDIVEEW-------DMNWRNQPTLTNSVVSQ 693
Query: 371 QLDPSEST---FLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCF 427
+ E+ F+G + N + D R+ V G S T C
Sbjct: 694 YKNDDETNNQLFVGYNGNNMFLVDPRESKNKVTVKFHGGSNPKSVTT-----------CA 742
Query: 428 ASTGDGSIVVGSLDGKIRLYSKTSMRQ----------------AKTAFPGLGSPITHVDV 471
A+TG G I G+ G+I+L+SKT Q ++T PG+G PI +DV
Sbjct: 743 ATTGSGQIAFGTSKGEIKLFSKTQFDQNKRSVTSSDPLGAIARSRTTLPGIGDPIVGIDV 802
Query: 472 TYDGKWILGTTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTD 531
T DGKWI+ T Y+++I S KDG +GF R+G + P+P+ L L P D G
Sbjct: 803 TKDGKWIVATCKQYIMVIPA--SLKDG--SSGFEDRLGARRPSPKRLILKPQDIKRMGGV 858
Query: 532 NKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQ 580
F+ V + + E ++ + G F + W+F+++K + + Y+ +Q
Sbjct: 859 VNFTPAKFNIVGDE-QSETSILTSTGSFLITWNFRKIKQNILDVYQIKQ 906
>sp|P40157|VID27_YEAST Vacuolar import and degradation protein 27 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VID27 PE=1
SV=1
Length = 782
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 160/374 (42%), Gaps = 58/374 (15%)
Query: 246 EEFEE---LANGGVQSLTLGALDN-SFLVSDLGLQVYRNYNRGIHNKGVSVRFDGGSSKI 301
E FEE + G SLT+ +N S++ D + V++ ++ S+ F I
Sbjct: 407 EAFEEPRRATSKGNSSLTVAFRNNRSYVTRDNRIGVFKT-----DDEDDSLEFVAAIKNI 461
Query: 302 ----GSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTD 357
G + P K +L + N++L + K + ++DIE GK++ EW D
Sbjct: 462 SNLGGKSIDPHKPMLYMEDRNLILTDGENENK-----LYKMDIERGKVIEEW----STGD 512
Query: 358 ITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQ 417
+ K Q+ P E T +G+ + + D R +N + D +
Sbjct: 513 KNVVQYGPTKKFDQMTP-EQTIVGVSQKGVFKIDPRING---KNKIAVD-------ESKD 561
Query: 418 FSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKW 477
+ NF +T G I +GS G I+LY + +R AKTA P LG I + + DGKW
Sbjct: 562 YVGKYNFSSIGTTESGYIAIGSEKGDIKLYDRLGIR-AKTAIPSLGQAIKFITTSADGKW 620
Query: 478 ILGTTDTYLILICTLFSDKDGKTKTGFSGRMG--NKIPAPR-----LLKLTPLDSH--LA 528
+L T ++ L+L+ KDGK +G +G PA +LK+ P S L
Sbjct: 621 LLATCESTLLLMD--LKIKDGKN----AGNIGFLKSFPASENVKTYVLKIRPEHSASILT 674
Query: 529 GTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCY 588
T I + T G+QE+ +V + G +++ W + + NQ G + Y Y
Sbjct: 675 YTKKPIRFTKAYFNTGIGQQEQTIVTSTGPYAISWSLKGI--------LNQDG-SNNYPY 725
Query: 589 KIVLKDESIVESRF 602
+I + +V F
Sbjct: 726 RIRRYNADVVADNF 739
>sp|Q5XGI5|WDR83_XENTR WD repeat domain-containing protein 83 OS=Xenopus tropicalis
GN=wdr83 PE=2 SV=1
Length = 314
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 432 DGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTT-DTYLILI 489
D I+ GS+DG +R Y +R+ + LGSPIT V + D + +L ++ D+ L L+
Sbjct: 163 DHEILAGSVDGNLRRYD---LRKGEMCADYLGSPITCVSFSQDSQCLLASSLDSTLRLL 218
>sp|Q9W7F2|WDR1A_XENLA WD repeat-containing protein 1-A OS=Xenopus laevis GN=wdr1-a PE=2
SV=2
Length = 607
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 431 GDGSIVVGSLDGKIRLYS--KTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLIL 488
G G++ VG DGK+ LYS S++ P G+ +T + ++DG + L TD ++
Sbjct: 456 GSGTVAVGGADGKVHLYSIQGNSLKDEGKTLPAKGA-VTDLAYSHDGAF-LAVTDANKVV 513
Query: 489 ICTLFSDKDGKT-KTGFSGRMGNKIPAPRLLKLTPLDSHLAGT 530
T+FS DG + K + G + + +P + H A +
Sbjct: 514 --TVFSVADGYSEKNSYYGHHAKALS----VAWSPDNEHFASS 550
>sp|B2JIA0|GUAA_BURP8 GMP synthase [glutamine-hydrolyzing] OS=Burkholderia phymatum
(strain DSM 17167 / STM815) GN=guaA PE=3 SV=1
Length = 527
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 81/220 (36%), Gaps = 48/220 (21%)
Query: 109 GNDSDDDEEESEKGVLGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWALKF 168
GN D+ E K V GD +L + V + V+ + + GDQ FVD G+ L
Sbjct: 206 GNYIDEAVENIRKQV-GDEHVILGLSGGVDSSVAAALLHRAIGDQLTCVFVDHGLLRL-- 262
Query: 169 FSDSEYRKFVTEFQDRLFENVYGLKATE------------ENKMKVYGKEFIGWVKPE-- 214
+E + ++ F D L V + A+E E K K+ G EF+ + E
Sbjct: 263 ---NEAEQVMSMFADNLGVKVIHVDASEAFMSKLKGVTDPEAKRKIIGAEFVEVFQTEAG 319
Query: 215 -------VADDSMWEDADDGLDKTPESVTPVRG-----------NRDLLEEFEELANGGV 256
+A +++ D + K ++ ++ N LLE EL V
Sbjct: 320 KLTDAKWLAQGTIYPDVIESAGKGKKAAHTIKSHHNVGGLPETLNLKLLEPLRELFKDEV 379
Query: 257 QSLTLGALDNSFLVSDLGLQVYRNYNRGIHNKGVSVRFDG 296
+ L + LGL Y G+ VR G
Sbjct: 380 RELGV----------KLGLPPSMVYRHPFPGPGLGVRILG 409
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 426 CFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGT 481
CF G + GS DG +R++ T+ KT PITHV + +GK+IL +
Sbjct: 239 CFNRDG-AYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILAS 293
>sp|O93277|WDR1_CHICK WD repeat-containing protein 1 OS=Gallus gallus GN=WDR1 PE=2 SV=1
Length = 609
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 431 GDGSIVVGSLDGKIRLYS--KTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLIL 488
G GS+ VG DG +RLYS TS++ G P+T + ++DG + L D ++
Sbjct: 458 GGGSVAVGGTDGNVRLYSIQGTSLKSDDKTLEAKG-PVTDLAYSHDGAF-LAVCDANKVV 515
Query: 489 ICTLFSDKDGKTKTG-FSGRMGNKIPAPRLLKLTPLDSHLA 528
T+FS DG + F G + + +P + H A
Sbjct: 516 --TVFSVPDGYVEHNVFYGHHAKVV----CIAWSPDNEHFA 550
>sp|Q90Z04|CDON_XENLA Cell adhesion molecule-related/down-regulated by oncogenes
OS=Xenopus laevis GN=cdon PE=2 SV=1
Length = 1249
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 424 FQCFASTGDGSIVVGSLDGKIRLYS--------KTSMRQAKTAFPGL----GSPITHVDV 471
+QC AST G+I+ S+ + + + + +AF G +P HV
Sbjct: 96 YQCIASTSVGAILSKSVSVSVAYLNDFETTTGHSVTAEEGSSAFIGCKIPESNPKAHVRY 155
Query: 472 TYDGKWILGTTDTYLIL 488
GKW+ ++D YLIL
Sbjct: 156 KVRGKWLKESSDKYLIL 172
>sp|Q8XZG4|GUAA_RALSO GMP synthase [glutamine-hydrolyzing] OS=Ralstonia solanacearum
(strain GMI1000) GN=guaA PE=3 SV=1
Length = 547
Score = 34.3 bits (77), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 28/180 (15%)
Query: 49 DEVDAKLKSLKLKYSTPQSP--NVKNPVKLYLHIGGNTPKAKWVISDKLTSYSFVRTNKI 106
D+V KL STP P + + + Y + + P+ + + FV +I
Sbjct: 148 DKVTEMPPGFKLMASTPSCPIAGMADEARGYYAVQFH-PEVTHTVQGRALLERFVL--EI 204
Query: 107 NGGNDS---DDDEEESEKGV---LGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVD 160
G D EE+ K + +GD +L + V + V+ + + GDQ FVD
Sbjct: 205 AGAKPDWIMRDHIEEAVKSIREQVGDEEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVD 264
Query: 161 KGVWALKFFSDSEYRKFVTEFQDRLFENVYGLKATE------------ENKMKVYGKEFI 208
G+ L +E + + F+ RL V + A+E E K K+ G+EF+
Sbjct: 265 HGLLRL-----NEGQMVLDMFEGRLHAKVVHVDASEQFLGHLTGVTDPEAKRKIIGREFV 319
>sp|Q63T42|GUAA_BURPS GMP synthase [glutamine-hydrolyzing] OS=Burkholderia pseudomallei
(strain K96243) GN=guaA PE=3 SV=1
Length = 547
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 124 LGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWALKFFSDSEYRKFVTEFQD 183
+GD +L + V + V+ + + GDQ FVD G+ L +E + + F+
Sbjct: 228 VGDEEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRL-----NEGKMVLDMFEG 282
Query: 184 RLFENVYGLKATE------------ENKMKVYGKEFI 208
RL V + A+E E+K K+ G+EF+
Sbjct: 283 RLHAKVVHVDASEQFLGHLAGVADPEHKRKIIGREFV 319
>sp|Q3JR65|GUAA_BURP1 GMP synthase [glutamine-hydrolyzing] OS=Burkholderia pseudomallei
(strain 1710b) GN=guaA PE=3 SV=1
Length = 547
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 124 LGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWALKFFSDSEYRKFVTEFQD 183
+GD +L + V + V+ + + GDQ FVD G+ L +E + + F+
Sbjct: 228 VGDEEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRL-----NEGKMVLDMFEG 282
Query: 184 RLFENVYGLKATE------------ENKMKVYGKEFI 208
RL V + A+E E+K K+ G+EF+
Sbjct: 283 RLHAKVVHVDASEQFLGHLAGVADPEHKRKIIGREFV 319
>sp|A3NAR3|GUAA_BURP6 GMP synthase [glutamine-hydrolyzing] OS=Burkholderia pseudomallei
(strain 668) GN=guaA PE=3 SV=1
Length = 539
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 124 LGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWALKFFSDSEYRKFVTEFQD 183
+GD +L + V + V+ + + GDQ FVD G+ L +E + + F+
Sbjct: 220 VGDEEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRL-----NEGKMVLDMFEG 274
Query: 184 RLFENVYGLKATE------------ENKMKVYGKEFI 208
RL V + A+E E+K K+ G+EF+
Sbjct: 275 RLHAKVVHVDASEQFLGHLAGVADPEHKRKIIGREFV 311
>sp|A3NWJ3|GUAA_BURP0 GMP synthase [glutamine-hydrolyzing] OS=Burkholderia pseudomallei
(strain 1106a) GN=guaA PE=3 SV=1
Length = 539
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 124 LGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWALKFFSDSEYRKFVTEFQD 183
+GD +L + V + V+ + + GDQ FVD G+ L +E + + F+
Sbjct: 220 VGDEEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRL-----NEGKMVLDMFEG 274
Query: 184 RLFENVYGLKATE------------ENKMKVYGKEFI 208
RL V + A+E E+K K+ G+EF+
Sbjct: 275 RLHAKVVHVDASEQFLGHLAGVADPEHKRKIIGREFV 311
>sp|A1V534|GUAA_BURMS GMP synthase [glutamine-hydrolyzing] OS=Burkholderia mallei (strain
SAVP1) GN=guaA PE=3 SV=1
Length = 539
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 124 LGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWALKFFSDSEYRKFVTEFQD 183
+GD +L + V + V+ + + GDQ FVD G+ L +E + + F+
Sbjct: 220 VGDEEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRL-----NEGKMVLDMFEG 274
Query: 184 RLFENVYGLKATE------------ENKMKVYGKEFI 208
RL V + A+E E+K K+ G+EF+
Sbjct: 275 RLHAKVVHVDASEQFLGHLAGVADPEHKRKIIGREFV 311
>sp|Q62JF6|GUAA_BURMA GMP synthase [glutamine-hydrolyzing] OS=Burkholderia mallei (strain
ATCC 23344) GN=guaA PE=3 SV=1
Length = 539
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 124 LGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWALKFFSDSEYRKFVTEFQD 183
+GD +L + V + V+ + + GDQ FVD G+ L +E + + F+
Sbjct: 220 VGDEEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRL-----NEGKMVLDMFEG 274
Query: 184 RLFENVYGLKATE------------ENKMKVYGKEFI 208
RL V + A+E E+K K+ G+EF+
Sbjct: 275 RLHAKVVHVDASEQFLGHLAGVADPEHKRKIIGREFV 311
>sp|A2SBA7|GUAA_BURM9 GMP synthase [glutamine-hydrolyzing] OS=Burkholderia mallei (strain
NCTC 10229) GN=guaA PE=3 SV=1
Length = 539
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 124 LGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWALKFFSDSEYRKFVTEFQD 183
+GD +L + V + V+ + + GDQ FVD G+ L +E + + F+
Sbjct: 220 VGDEEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRL-----NEGKMVLDMFEG 274
Query: 184 RLFENVYGLKATE------------ENKMKVYGKEFI 208
RL V + A+E E+K K+ G+EF+
Sbjct: 275 RLHAKVVHVDASEQFLGHLAGVADPEHKRKIIGREFV 311
>sp|A3MKQ7|GUAA_BURM7 GMP synthase [glutamine-hydrolyzing] OS=Burkholderia mallei (strain
NCTC 10247) GN=guaA PE=3 SV=1
Length = 539
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 124 LGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWALKFFSDSEYRKFVTEFQD 183
+GD +L + V + V+ + + GDQ FVD G+ L +E + + F+
Sbjct: 220 VGDEEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRL-----NEGKMVLDMFEG 274
Query: 184 RLFENVYGLKATE------------ENKMKVYGKEFI 208
RL V + A+E E+K K+ G+EF+
Sbjct: 275 RLHAKVVHVDASEQFLGHLAGVADPEHKRKIIGREFV 311
>sp|A4GGA5|RPOB_PHAVU DNA-directed RNA polymerase subunit beta OS=Phaseolus vulgaris
GN=rpoB PE=3 SV=1
Length = 1070
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 498 GKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHG---GHFSWVTE 544
GK+K F GR GN P ++ T + + D+KIHG GH++ VT+
Sbjct: 923 GKSKI-FDGRTGNSFKQPAIMGKTYILKLIHQVDDKIHGRSSGHYALVTQ 971
>sp|B4MA12|WUHO_DROVI tRNA (guanine-N(7)-)-methyltransferase subunit wuho OS=Drosophila
virilis GN=wuho PE=3 SV=1
Length = 397
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 423 NFQCFASTGDGSIVVGSLDGK--IRLYSKTSMRQAKTAFPG 461
N CFA T D V G+LD + +R+Y+ + QAKT G
Sbjct: 304 NISCFALTADSIYVAGALDERLTLRVYNSSDGEQAKTVPTG 344
>sp|Q2GHY2|GUAA_EHRCR GMP synthase [glutamine-hydrolyzing] OS=Ehrlichia chaffeensis
(strain Arkansas) GN=guaA PE=3 SV=1
Length = 526
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 114 DDEEESEKGVLGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWALKFFSDSE 173
D++E K +GD + + V + V+ + + GDQ F+D G+ L++ +
Sbjct: 207 DEQENLIKKQVGDKKVIAALSGGVDSSVAAALTYRAIGDQLHCIFIDNGL--LRYNEAEK 264
Query: 174 YRK-FVTEFQ------DR--LFENVYGLKATEENKMKVYGKEFI 208
R+ FV +FQ DR +F + E K K+ GK FI
Sbjct: 265 VRQSFVDQFQMPVTIVDRSSVFLDKLQFVTDPEQKRKIIGKTFI 308
>sp|Q86WI1|PKHL1_HUMAN Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 PE=2 SV=2
Length = 4243
Score = 33.1 bits (74), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 399 VQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTA 458
V N+ GD+ HW Q H F RG ++ F+ + GS++ DGK TS RQ T+
Sbjct: 1413 VLNVSVGDTVAWHW-QTHPFLRGIGYRIFSVSSPGSVI---YDGK----GFTSGRQKSTS 1464
>sp|A6W2W4|GUAA_MARMS GMP synthase [glutamine-hydrolyzing] OS=Marinomonas sp. (strain
MWYL1) GN=guaA PE=3 SV=1
Length = 525
Score = 33.1 bits (74), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 79/219 (36%), Gaps = 38/219 (17%)
Query: 109 GNDSDDDEEESEKGVLGDGFWVLKVGSKVRAKVSTEMQLKMFGDQRRIDFVDKGVWAL-- 166
N + D E ++ V GD +L + V + V + K GDQ FVD G+ L
Sbjct: 211 ANIAQDAIERMQEQV-GDKKVLLALSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLHE 269
Query: 167 -----KFFSDSEYRKFVTEFQDRLFENVYGLKATEENKMKVYGKEFI------------- 208
K F+D+ K + + LF +A E K K+ G FI
Sbjct: 270 GDQVMKMFADNMGVKVIRVDAEDLFLGKLANEADPEKKRKIIGNTFIDVFDTEATKLTDV 329
Query: 209 -----GWVKPEVADDSMWEDADDGLDKTPESV--TPVRGNRDLLEEFEELANGGVQSLTL 261
G + P+V + + + + K+ +V P L+E EL V+ L L
Sbjct: 330 EFLAQGTIYPDVIESAASKTGKAHVIKSHHNVGGLPEDMQFKLVEPLRELFKDEVRKLGL 389
Query: 262 GALDNSFLVSDLGLQVYRNYNRGIHNKGVSVRFDGGSSK 300
+LGL Y G+ VR G K
Sbjct: 390 ----------ELGLPYDMVYRHPFPGPGLGVRILGEVKK 418
>sp|Q652P4|CPSF2_ORYSJ Cleavage and polyadenylation specificity factor subunit 2 OS=Oryza
sativa subsp. japonica GN=Os09g0569400 PE=2 SV=1
Length = 738
Score = 32.7 bits (73), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 49/138 (35%), Gaps = 43/138 (31%)
Query: 172 SEYRKFVTEFQDRLFENVYGLKATEENKMKVYGKEFIGWVKPEVADDSMWEDADDGLDKT 231
S+ + + ++L NV K G+ I WV EV DD L
Sbjct: 605 SDLCAYKVQLSEKLMSNVIS---------KKLGEHEIAWVDAEVGK------TDDKLTLL 649
Query: 232 PESVTPVRGNRDLLEEFEELANGGVQSLTLGALDNSFLVSDLGLQVYRNYNRGIHNKGVS 291
P S TP A S LV DL L ++ + + NKG+
Sbjct: 650 PPSSTP-------------------------AAHKSVLVGDLKLADFKQF---LANKGLQ 681
Query: 292 VRFDGGSSKIGSNSTPKK 309
V F GG+ + G T +K
Sbjct: 682 VEFAGGALRCGEYITLRK 699
>sp|Q6XIN1|TCTP_DROYA Translationally-controlled tumor protein homolog OS=Drosophila
yakuba GN=Tctp PE=2 SV=1
Length = 172
Score = 32.7 bits (73), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 174 YRKFVTEFQDRLFENVYGLKATEENKMKVYGKEFIGW---VKPEVADDSMWEDADDGLDK 230
Y+ +T D +F + Y +K +E +VYGK +K E A+ S E+AD+G D
Sbjct: 4 YKDIIT--GDEMFADTYKMKLVDEVIYEVYGKLITRQGDDIKLEGANAS-AEEADEGTDI 60
Query: 231 TPESVTPVRGNRDLLEEFEELANGGVQSLTL 261
T ES V N L E F A G +S TL
Sbjct: 61 TSESGVDVVLNHRLQECF---AFGDKKSYTL 88
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 251,438,877
Number of Sequences: 539616
Number of extensions: 11485108
Number of successful extensions: 26145
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 25910
Number of HSP's gapped (non-prelim): 305
length of query: 634
length of database: 191,569,459
effective HSP length: 124
effective length of query: 510
effective length of database: 124,657,075
effective search space: 63575108250
effective search space used: 63575108250
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)