Query 047036
Match_columns 634
No_of_seqs 358 out of 1340
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 12:00:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047036.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047036hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 3.9E-29 1.3E-33 251.9 34.4 256 256-602 14-278 (304)
2 1vyh_C Platelet-activating fac 100.0 1.8E-28 6E-33 258.5 31.9 254 256-602 109-388 (410)
3 4gqb_B Methylosome protein 50; 100.0 1.3E-27 4.3E-32 248.6 30.8 238 258-567 85-331 (344)
4 4gqb_B Methylosome protein 50; 100.0 4.1E-28 1.4E-32 252.2 27.1 228 309-619 86-326 (344)
5 3ow8_A WD repeat-containing pr 100.0 3E-27 1E-31 241.7 32.7 255 257-602 34-298 (321)
6 4ery_A WD repeat-containing pr 100.0 2.4E-26 8.1E-31 229.6 36.8 257 256-602 24-287 (312)
7 3frx_A Guanine nucleotide-bind 100.0 6E-27 2.1E-31 237.9 32.1 206 257-507 19-237 (319)
8 2ynn_A Coatomer subunit beta'; 100.0 4.6E-27 1.6E-31 236.7 29.4 217 301-602 17-236 (304)
9 2pbi_B Guanine nucleotide-bind 100.0 1.6E-26 5.4E-31 239.0 33.3 190 312-564 161-354 (354)
10 1erj_A Transcriptional repress 100.0 1.4E-26 4.8E-31 241.8 33.0 263 256-602 65-360 (393)
11 1vyh_C Platelet-activating fac 100.0 4.5E-27 1.5E-31 247.8 29.5 233 257-566 152-410 (410)
12 3ow8_A WD repeat-containing pr 100.0 9.3E-27 3.2E-31 238.0 30.8 231 257-565 82-319 (321)
13 1got_B GT-beta; complex (GTP-b 100.0 6.1E-26 2.1E-30 232.1 36.1 257 256-605 56-323 (340)
14 3iz6_a 40S ribosomal protein R 100.0 9.3E-27 3.2E-31 242.1 29.7 242 256-566 67-374 (380)
15 1nr0_A Actin interacting prote 100.0 4.1E-26 1.4E-30 252.8 35.6 216 257-504 61-362 (611)
16 4g56_B MGC81050 protein; prote 100.0 7E-27 2.4E-31 242.3 25.6 273 255-619 42-338 (357)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 6.3E-26 2.2E-30 232.8 32.4 281 257-602 18-311 (345)
18 1got_B GT-beta; complex (GTP-b 100.0 6.5E-26 2.2E-30 231.9 31.4 233 257-564 99-340 (340)
19 4g56_B MGC81050 protein; prote 99.9 9.4E-26 3.2E-30 233.8 27.5 240 257-567 96-343 (357)
20 2xzm_R RACK1; ribosome, transl 99.9 9.7E-25 3.3E-29 223.0 34.0 231 265-567 38-285 (343)
21 1erj_A Transcriptional repress 99.9 4.5E-25 1.5E-29 230.5 31.5 245 257-568 125-390 (393)
22 2hes_X YDR267CP; beta-propelle 99.9 8.5E-25 2.9E-29 223.1 31.1 192 257-492 16-229 (330)
23 3frx_A Guanine nucleotide-bind 99.9 9.5E-25 3.2E-29 221.7 30.1 204 317-604 30-247 (319)
24 2hes_X YDR267CP; beta-propelle 99.9 6.1E-25 2.1E-29 224.2 28.7 190 319-567 26-230 (330)
25 3dm0_A Maltose-binding peripla 99.9 7.9E-25 2.7E-29 245.0 30.4 241 256-567 383-632 (694)
26 2ymu_A WD-40 repeat protein; u 99.9 3.3E-24 1.1E-28 230.5 33.8 249 257-604 305-559 (577)
27 2pm7_B Protein transport prote 99.9 9.6E-25 3.3E-29 219.1 27.6 198 257-492 11-237 (297)
28 2ymu_A WD-40 repeat protein; u 99.9 1.5E-24 5.1E-29 233.2 30.0 226 257-564 346-577 (577)
29 2pm7_B Protein transport prote 99.9 1.2E-24 4.1E-29 218.4 27.3 200 313-567 17-238 (297)
30 4ery_A WD repeat-containing pr 99.9 6E-24 2E-28 212.1 31.5 194 310-567 28-223 (312)
31 2pbi_B Guanine nucleotide-bind 99.9 3.6E-24 1.2E-28 221.3 30.5 217 315-602 74-334 (354)
32 1nr0_A Actin interacting prote 99.9 2.4E-24 8.3E-29 238.6 31.0 199 255-505 18-229 (611)
33 4e54_B DNA damage-binding prot 99.9 1.5E-24 5.2E-29 229.0 27.2 207 257-508 121-338 (435)
34 4aow_A Guanine nucleotide-bind 99.9 1.9E-23 6.4E-28 207.6 32.9 267 255-602 38-314 (340)
35 3dwl_C Actin-related protein 2 99.9 3.6E-25 1.2E-29 225.3 20.6 234 257-566 13-280 (377)
36 3bg1_A Protein SEC13 homolog; 99.9 6.8E-25 2.3E-29 222.5 22.4 222 315-603 23-271 (316)
37 3iz6_a 40S ribosomal protein R 99.9 3.7E-24 1.3E-28 222.5 28.0 232 314-602 75-352 (380)
38 3bg1_A Protein SEC13 homolog; 99.9 8.6E-25 2.9E-29 221.8 22.3 198 257-492 15-246 (316)
39 2xzm_R RACK1; ribosome, transl 99.9 1.8E-23 6.1E-28 213.7 32.0 184 316-566 38-243 (343)
40 1k8k_C P40, ARP2/3 complex 41 99.9 1.1E-23 3.7E-28 212.0 29.8 235 258-567 11-274 (372)
41 4h5i_A Guanine nucleotide-exch 99.9 4.4E-24 1.5E-28 222.3 27.1 192 310-566 138-342 (365)
42 3fm0_A Protein CIAO1; WDR39,SG 99.9 5.5E-24 1.9E-28 218.4 26.3 193 311-566 22-224 (345)
43 3dwl_C Actin-related protein 2 99.9 4.9E-25 1.7E-29 224.3 17.9 239 301-605 15-262 (377)
44 3dw8_B Serine/threonine-protei 99.9 2.5E-23 8.4E-28 215.6 28.7 267 257-567 30-373 (447)
45 2j04_B YDR362CP, TAU91; beta p 99.9 1.3E-24 4.5E-29 240.4 20.4 243 256-566 154-427 (524)
46 3k26_A Polycomb protein EED; W 99.9 7.5E-23 2.6E-27 204.3 30.7 273 256-602 19-343 (366)
47 3vl1_A 26S proteasome regulato 99.9 1.2E-22 4E-27 209.3 31.9 270 264-602 107-393 (420)
48 3vl1_A 26S proteasome regulato 99.9 1.2E-23 4.2E-28 216.6 22.8 212 311-567 62-278 (420)
49 1gxr_A ESG1, transducin-like e 99.9 6E-22 2E-26 195.5 33.5 255 257-602 53-314 (337)
50 3zwl_B Eukaryotic translation 99.9 5.6E-22 1.9E-26 197.7 33.2 214 255-505 32-257 (369)
51 3mkq_A Coatomer beta'-subunit; 99.9 1.6E-22 5.3E-27 226.6 32.4 255 256-602 14-278 (814)
52 3f3f_A Nucleoporin SEH1; struc 99.9 5E-23 1.7E-27 201.7 24.1 154 309-493 15-249 (351)
53 3lrv_A PRE-mRNA-splicing facto 99.9 1.1E-22 3.7E-27 207.5 27.5 134 333-492 95-243 (343)
54 3i2n_A WD repeat-containing pr 99.9 9.6E-23 3.3E-27 203.4 26.3 280 255-602 18-329 (357)
55 4h5i_A Guanine nucleotide-exch 99.9 4.8E-23 1.7E-27 214.4 25.1 190 258-492 136-342 (365)
56 2j04_B YDR362CP, TAU91; beta p 99.9 1.6E-23 5.6E-28 231.7 22.7 249 299-619 135-423 (524)
57 3ei3_B DNA damage-binding prot 99.9 2.3E-22 8E-27 205.9 29.6 204 256-508 74-293 (383)
58 3gre_A Serine/threonine-protei 99.9 6.5E-23 2.2E-27 213.7 25.4 255 256-567 64-359 (437)
59 4a11_B DNA excision repair pro 99.9 4E-21 1.4E-25 194.7 37.2 275 256-604 44-344 (408)
60 1k8k_C P40, ARP2/3 complex 41 99.9 2.5E-22 8.4E-27 202.1 27.7 232 311-603 14-253 (372)
61 4gq1_A NUP37; propeller, trans 99.9 1.1E-22 3.8E-27 213.0 26.1 256 315-631 99-388 (393)
62 3jrp_A Fusion protein of prote 99.9 4.5E-22 1.5E-26 199.7 29.2 199 256-492 12-239 (379)
63 1r5m_A SIR4-interacting protei 99.9 4.9E-22 1.7E-26 202.0 29.7 233 257-569 110-363 (425)
64 3v7d_B Cell division control p 99.9 7.6E-22 2.6E-26 207.3 32.1 235 265-567 131-381 (464)
65 3k26_A Polycomb protein EED; W 99.9 4E-23 1.4E-27 206.3 21.0 206 257-492 71-317 (366)
66 3dm0_A Maltose-binding peripla 99.9 4.6E-22 1.6E-26 222.6 32.0 251 258-566 433-692 (694)
67 1gxr_A ESG1, transducin-like e 99.9 2.3E-21 7.7E-26 191.4 32.0 191 257-492 99-295 (337)
68 1sq9_A Antiviral protein SKI8; 99.9 4.1E-22 1.4E-26 203.2 27.4 217 256-506 17-276 (397)
69 4aez_A CDC20, WD repeat-contai 99.9 1.2E-21 4.2E-26 203.9 31.3 211 310-602 139-357 (401)
70 4gga_A P55CDC, cell division c 99.9 1.5E-21 5E-26 204.9 32.1 248 256-604 116-374 (420)
71 2pm9_A Protein WEB1, protein t 99.9 2.4E-22 8.1E-27 205.8 25.4 249 256-569 68-339 (416)
72 1p22_A F-BOX/WD-repeat protein 99.9 2.2E-21 7.4E-26 204.2 32.7 268 258-619 136-409 (435)
73 1r5m_A SIR4-interacting protei 99.9 5.7E-22 2E-26 201.5 27.2 277 257-602 47-338 (425)
74 4e54_B DNA damage-binding prot 99.9 1.1E-22 3.9E-27 214.7 22.7 154 301-492 123-281 (435)
75 3f3f_A Nucleoporin SEH1; struc 99.9 8.9E-22 3E-26 192.8 27.3 215 256-492 12-336 (351)
76 2w18_A PALB2, fancn, partner a 99.9 4.8E-22 1.6E-26 211.4 25.3 179 331-565 155-355 (356)
77 3v7d_B Cell division control p 99.9 3E-21 1E-25 202.7 31.1 248 256-602 163-441 (464)
78 2w18_A PALB2, fancn, partner a 99.9 1.3E-22 4.4E-27 215.7 20.8 158 315-491 191-355 (356)
79 3odt_A Protein DOA1; ubiquitin 99.9 3.1E-21 1.1E-25 188.9 28.9 230 257-567 61-296 (313)
80 3jrp_A Fusion protein of prote 99.9 4.5E-22 1.5E-26 199.6 23.4 203 310-567 16-240 (379)
81 4aow_A Guanine nucleotide-bind 99.9 2.5E-21 8.5E-26 192.3 28.2 204 293-567 33-246 (340)
82 1sq9_A Antiviral protein SKI8; 99.9 6.2E-22 2.1E-26 201.9 24.0 212 257-505 64-330 (397)
83 2pm9_A Protein WEB1, protein t 99.9 6.6E-22 2.2E-26 202.5 24.2 223 308-605 70-316 (416)
84 4ggc_A P55CDC, cell division c 99.9 1.2E-20 4.2E-25 185.6 31.8 211 311-603 73-293 (318)
85 3vu4_A KMHSV2; beta-propeller 99.9 4.2E-21 1.4E-25 198.4 29.6 199 255-492 19-270 (355)
86 3ei3_B DNA damage-binding prot 99.9 3.3E-21 1.1E-25 197.4 28.3 194 314-567 82-282 (383)
87 3odt_A Protein DOA1; ubiquitin 99.9 7.3E-21 2.5E-25 186.3 29.1 245 257-602 20-274 (313)
88 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1E-20 3.5E-25 198.8 32.0 218 264-567 127-348 (445)
89 3sfz_A APAF-1, apoptotic pepti 99.9 2.5E-21 8.7E-26 228.3 30.5 237 256-568 616-914 (1249)
90 2aq5_A Coronin-1A; WD40 repeat 99.9 2.8E-21 9.5E-26 200.5 27.2 180 273-492 57-253 (402)
91 3mkq_A Coatomer beta'-subunit; 99.9 2.1E-21 7.1E-26 217.5 27.6 217 301-602 17-236 (814)
92 1pgu_A Actin interacting prote 99.9 5.6E-21 1.9E-25 205.2 29.3 236 256-567 19-283 (615)
93 2aq5_A Coronin-1A; WD40 repeat 99.9 1.9E-21 6.6E-26 201.6 24.7 177 333-567 57-254 (402)
94 3i2n_A WD repeat-containing pr 99.9 2.7E-21 9.1E-26 192.9 24.8 147 314-492 126-290 (357)
95 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.2E-20 4E-25 199.8 30.8 162 308-506 105-280 (450)
96 4a11_B DNA excision repair pro 99.9 4.7E-21 1.6E-25 194.1 26.0 210 257-492 101-364 (408)
97 3dw8_B Serine/threonine-protei 99.9 1.5E-21 5E-26 202.3 22.5 220 308-567 31-315 (447)
98 3sfz_A APAF-1, apoptotic pepti 99.9 5.1E-21 1.7E-25 225.7 30.1 160 308-504 618-781 (1249)
99 2xyi_A Probable histone-bindin 99.9 6.1E-21 2.1E-25 201.5 27.6 196 257-492 130-352 (430)
100 3gre_A Serine/threonine-protei 99.9 8.7E-22 3E-26 205.2 20.0 159 313-509 178-371 (437)
101 4gq1_A NUP37; propeller, trans 99.9 2.2E-22 7.6E-27 210.8 15.5 223 294-566 132-388 (393)
102 3zwl_B Eukaryotic translation 99.9 1E-20 3.5E-25 188.6 26.4 193 311-567 38-249 (369)
103 4aez_A CDC20, WD repeat-contai 99.9 3.3E-20 1.1E-24 193.1 31.2 230 257-567 136-380 (401)
104 2oaj_A Protein SNI1; WD40 repe 99.9 6.9E-22 2.4E-26 231.1 20.7 218 315-567 445-732 (902)
105 2oaj_A Protein SNI1; WD40 repe 99.9 4.9E-21 1.7E-25 223.9 27.9 232 350-632 432-732 (902)
106 1pgu_A Actin interacting prote 99.9 3.1E-20 1.1E-24 199.4 31.9 265 258-605 67-349 (615)
107 1p22_A F-BOX/WD-repeat protein 99.9 1.1E-20 3.9E-25 198.7 27.7 215 315-618 141-359 (435)
108 3mmy_A MRNA export factor; mRN 99.9 1.7E-20 5.8E-25 186.9 24.5 222 255-508 39-315 (368)
109 2xyi_A Probable histone-bindin 99.9 1.4E-20 4.7E-25 198.8 24.7 221 318-602 142-386 (430)
110 3jro_A Fusion protein of prote 99.9 2.3E-20 7.9E-25 212.8 27.2 199 256-492 10-237 (753)
111 1yfq_A Cell cycle arrest prote 99.9 7.1E-20 2.4E-24 182.4 27.3 247 256-566 12-281 (342)
112 4gga_A P55CDC, cell division c 99.9 1.7E-19 5.8E-24 189.2 30.8 232 257-567 149-395 (420)
113 4ggc_A P55CDC, cell division c 99.9 1.4E-19 4.9E-24 177.9 27.9 132 333-492 45-180 (318)
114 2ovr_B FBW7, F-BOX/WD repeat p 99.9 4.4E-20 1.5E-24 194.0 25.0 180 316-567 128-308 (445)
115 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3E-20 1E-24 196.6 22.6 197 306-567 5-271 (450)
116 3lrv_A PRE-mRNA-splicing facto 99.9 2.3E-19 8E-24 182.8 28.4 190 259-492 88-291 (343)
117 3mmy_A MRNA export factor; mRN 99.8 1.9E-19 6.5E-24 179.3 24.7 219 317-602 54-323 (368)
118 2j04_A TAU60, YPL007P, hypothe 99.8 6.6E-20 2.3E-24 205.7 23.6 151 308-492 88-253 (588)
119 3jro_A Fusion protein of prote 99.8 4.3E-20 1.5E-24 210.5 21.2 197 316-567 20-238 (753)
120 2j04_A TAU60, YPL007P, hypothe 99.8 4.6E-20 1.6E-24 207.0 20.9 168 300-492 18-210 (588)
121 1yfq_A Cell cycle arrest prote 99.8 9.5E-19 3.2E-23 174.3 26.1 142 314-492 20-178 (342)
122 3vu4_A KMHSV2; beta-propeller 99.8 5.9E-19 2E-23 182.3 23.0 198 314-567 28-271 (355)
123 1l0q_A Surface layer protein; 99.8 1.1E-17 3.8E-22 170.9 29.4 230 257-567 33-275 (391)
124 1l0q_A Surface layer protein; 99.8 1.2E-16 4E-21 163.3 29.6 200 257-509 75-287 (391)
125 3bws_A Protein LP49; two-domai 99.8 1.8E-16 6.2E-21 164.1 29.0 230 258-567 172-432 (433)
126 3bws_A Protein LP49; two-domai 99.8 1.7E-16 5.7E-21 164.4 27.8 199 260-504 127-341 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 99.7 1.2E-14 4.2E-19 154.1 29.0 151 301-492 182-343 (415)
128 2oit_A Nucleoporin 214KDA; NH2 99.7 3.2E-16 1.1E-20 168.3 13.4 122 358-508 95-233 (434)
129 1nir_A Nitrite reductase; hemo 99.7 3.8E-14 1.3E-18 156.9 29.4 166 313-505 186-363 (543)
130 2oit_A Nucleoporin 214KDA; NH2 99.7 1.9E-15 6.5E-20 162.3 18.2 151 309-492 96-277 (434)
131 2ojh_A Uncharacterized protein 99.6 2.3E-14 7.9E-19 137.5 21.4 146 315-492 51-203 (297)
132 3u4y_A Uncharacterized protein 99.6 3.1E-13 1.1E-17 134.7 28.9 195 260-492 44-251 (331)
133 2hqs_A Protein TOLB; TOLB, PAL 99.6 9.9E-14 3.4E-18 147.1 26.6 209 257-523 180-408 (415)
134 3vgz_A Uncharacterized protein 99.6 4.8E-13 1.6E-17 133.7 28.0 175 333-566 111-302 (353)
135 1pby_B Quinohemoprotein amine 99.6 4.1E-13 1.4E-17 132.6 26.4 171 333-567 56-310 (337)
136 1ri6_A Putative isomerase YBHE 99.6 1.6E-12 5.4E-17 128.7 27.8 150 313-492 91-261 (343)
137 2ojh_A Uncharacterized protein 99.6 1.8E-12 6.3E-17 124.2 27.1 193 257-492 43-257 (297)
138 1jmx_B Amine dehydrogenase; ox 99.5 8.1E-13 2.8E-17 131.4 23.9 172 333-567 65-325 (349)
139 1xfd_A DIP, dipeptidyl aminope 99.5 1.7E-13 5.7E-18 152.3 18.6 150 301-491 20-202 (723)
140 3u4y_A Uncharacterized protein 99.5 8E-13 2.7E-17 131.8 21.6 132 333-492 20-159 (331)
141 1nir_A Nitrite reductase; hemo 99.5 5.1E-13 1.8E-17 147.9 22.3 141 317-492 149-310 (543)
142 3vgz_A Uncharacterized protein 99.5 2E-12 6.9E-17 129.1 23.8 150 332-504 68-222 (353)
143 1pby_B Quinohemoprotein amine 99.5 6.6E-13 2.3E-17 131.1 19.9 153 319-505 3-171 (337)
144 1ri6_A Putative isomerase YBHE 99.5 4.7E-12 1.6E-16 125.2 25.6 177 273-492 15-208 (343)
145 1xfd_A DIP, dipeptidyl aminope 99.5 3.6E-13 1.2E-17 149.6 17.8 214 258-504 19-296 (723)
146 2ecf_A Dipeptidyl peptidase IV 99.5 7E-13 2.4E-17 148.0 19.4 124 334-484 65-230 (741)
147 3o4h_A Acylamino-acid-releasin 99.5 1.4E-12 4.8E-17 142.4 20.3 187 258-492 24-226 (582)
148 1jmx_B Amine dehydrogenase; ox 99.5 5.3E-12 1.8E-16 125.5 21.4 155 318-505 12-183 (349)
149 1z68_A Fibroblast activation p 99.5 3.2E-13 1.1E-17 150.8 13.8 121 333-483 36-189 (719)
150 2ecf_A Dipeptidyl peptidase IV 99.4 3.1E-12 1E-16 142.8 21.3 167 313-507 116-331 (741)
151 1k32_A Tricorn protease; prote 99.4 1.1E-11 3.7E-16 145.9 25.7 141 333-508 265-420 (1045)
152 3hfq_A Uncharacterized protein 99.4 1.1E-10 3.9E-15 117.8 28.7 155 313-492 93-270 (347)
153 3hfq_A Uncharacterized protein 99.4 6.5E-11 2.2E-15 119.5 26.9 157 311-492 146-316 (347)
154 2z3z_A Dipeptidyl aminopeptida 99.4 8.2E-12 2.8E-16 138.8 21.1 204 257-506 83-352 (706)
155 2z3z_A Dipeptidyl aminopeptida 99.4 2E-11 6.7E-16 135.8 24.1 143 333-492 101-292 (706)
156 1z68_A Fibroblast activation p 99.4 2.3E-12 8E-17 143.8 16.2 201 258-490 18-284 (719)
157 1q7f_A NHL, brain tumor CG1071 99.4 2.5E-10 8.4E-15 112.4 27.5 197 305-566 77-279 (286)
158 3scy_A Hypothetical bacterial 99.4 1.2E-10 4.2E-15 118.4 25.5 150 316-492 108-290 (361)
159 1jof_A Carboxy-CIS,CIS-muconat 99.4 6.9E-10 2.4E-14 114.4 31.3 187 333-567 119-341 (365)
160 1k32_A Tricorn protease; prote 99.4 7.3E-12 2.5E-16 147.4 17.9 145 311-492 301-460 (1045)
161 3o4h_A Acylamino-acid-releasin 99.3 6.8E-12 2.3E-16 137.0 15.6 126 334-491 133-274 (582)
162 1jof_A Carboxy-CIS,CIS-muconat 99.3 2.9E-10 9.8E-15 117.3 25.1 150 314-492 48-223 (365)
163 4a5s_A Dipeptidyl peptidase 4 99.3 6.4E-11 2.2E-15 134.3 19.5 134 333-492 36-201 (740)
164 3scy_A Hypothetical bacterial 99.3 2.3E-09 7.9E-14 109.0 28.8 154 311-492 160-336 (361)
165 4a5s_A Dipeptidyl peptidase 4 99.2 3.5E-10 1.2E-14 128.2 21.4 208 257-492 18-293 (740)
166 3e5z_A Putative gluconolactona 99.2 3.1E-09 1.1E-13 105.4 25.3 146 314-492 36-201 (296)
167 3pe7_A Oligogalacturonate lyas 99.2 1.6E-09 5.5E-14 110.3 21.6 133 333-492 102-272 (388)
168 3fvz_A Peptidyl-glycine alpha- 99.2 4.1E-09 1.4E-13 107.4 23.5 166 333-522 69-250 (329)
169 1q7f_A NHL, brain tumor CG1071 99.1 3.5E-08 1.2E-12 96.9 24.3 148 311-492 126-279 (286)
170 3pe7_A Oligogalacturonate lyas 99.1 3.6E-09 1.2E-13 107.7 17.7 132 334-491 61-223 (388)
171 3azo_A Aminopeptidase; POP fam 99.0 3.1E-09 1.1E-13 117.2 16.6 144 315-490 88-269 (662)
172 2oiz_A Aromatic amine dehydrog 99.0 7.4E-08 2.5E-12 100.4 24.9 185 313-523 115-358 (361)
173 3fvz_A Peptidyl-glycine alpha- 99.0 4.6E-08 1.6E-12 99.6 22.2 170 306-505 92-285 (329)
174 3c5m_A Oligogalacturonate lyas 98.9 1.7E-08 5.8E-13 102.2 17.3 146 314-492 89-272 (396)
175 2xdw_A Prolyl endopeptidase; a 98.9 1.6E-07 5.3E-12 105.9 26.0 135 333-492 151-319 (710)
176 3no2_A Uncharacterized protein 98.9 4.2E-08 1.4E-12 99.1 19.2 149 318-507 6-164 (276)
177 2dg1_A DRP35, lactonase; beta 98.9 3E-07 1E-11 92.0 22.2 147 314-492 53-212 (333)
178 3e5z_A Putative gluconolactona 98.8 1E-06 3.5E-11 87.2 25.5 156 311-505 74-253 (296)
179 2xdw_A Prolyl endopeptidase; a 98.8 1.6E-07 5.5E-12 105.8 21.5 132 334-492 99-267 (710)
180 2oiz_A Aromatic amine dehydrog 98.8 1.3E-06 4.6E-11 90.9 26.6 58 333-401 81-146 (361)
181 3azo_A Aminopeptidase; POP fam 98.8 2.6E-08 8.9E-13 109.8 14.3 131 333-491 161-321 (662)
182 3c5m_A Oligogalacturonate lyas 98.8 2.9E-08 9.9E-13 100.5 11.4 142 333-491 60-223 (396)
183 2bkl_A Prolyl endopeptidase; m 98.8 7.1E-07 2.4E-11 100.4 23.7 194 258-492 123-348 (695)
184 1xip_A Nucleoporin NUP159; bet 98.8 1.6E-07 5.6E-12 100.9 17.6 172 255-480 39-230 (388)
185 2bkl_A Prolyl endopeptidase; m 98.7 1.1E-07 3.9E-12 106.9 16.7 131 334-490 95-258 (695)
186 1qks_A Cytochrome CD1 nitrite 98.7 1.2E-06 4.1E-11 98.1 23.1 93 333-453 177-277 (567)
187 2dg1_A DRP35, lactonase; beta 98.7 6.9E-07 2.4E-11 89.4 18.7 120 333-482 27-153 (333)
188 2z2n_A Virginiamycin B lyase; 98.7 9.2E-05 3.2E-09 71.6 33.1 146 311-491 62-211 (299)
189 3dsm_A Uncharacterized protein 98.7 4E-06 1.4E-10 85.7 24.5 202 258-505 88-309 (328)
190 3dsm_A Uncharacterized protein 98.7 5.8E-07 2E-11 91.9 18.2 134 333-492 64-211 (328)
191 3no2_A Uncharacterized protein 98.7 2.3E-06 7.9E-11 86.3 21.3 147 333-507 56-205 (276)
192 3g4e_A Regucalcin; six bladed 98.6 1.1E-05 3.9E-10 80.7 24.9 152 307-491 15-178 (297)
193 1rwi_B Serine/threonine-protei 98.6 2.5E-06 8.5E-11 82.4 19.2 149 311-492 113-263 (270)
194 2gop_A Trilobed protease; beta 98.6 2.4E-06 8.3E-11 85.6 19.2 119 333-492 152-290 (347)
195 1rwi_B Serine/threonine-protei 98.6 1.1E-05 3.6E-10 77.9 23.0 146 311-491 72-220 (270)
196 2hz6_A Endoplasmic reticulum t 98.6 6.2E-08 2.1E-12 101.6 7.7 146 318-504 10-156 (369)
197 2gop_A Trilobed protease; beta 98.6 1.1E-06 3.7E-11 88.1 16.4 123 333-490 85-250 (347)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 2.8E-05 9.7E-10 76.4 25.1 156 310-492 121-298 (314)
199 2qc5_A Streptogramin B lactona 98.5 0.0004 1.4E-08 67.1 32.3 146 311-491 67-216 (300)
200 2qc5_A Streptogramin B lactona 98.5 9.6E-05 3.3E-09 71.6 27.8 147 311-491 25-174 (300)
201 1xip_A Nucleoporin NUP159; bet 98.5 8.8E-07 3E-11 95.2 13.2 144 304-492 36-190 (388)
202 1yr2_A Prolyl oligopeptidase; 98.4 1E-05 3.4E-10 91.9 20.8 109 359-492 166-302 (741)
203 1pjx_A Dfpase, DIISOPROPYLFLUO 98.4 7.9E-05 2.7E-09 73.2 24.0 134 333-492 46-206 (314)
204 1yr2_A Prolyl oligopeptidase; 98.4 4.3E-05 1.5E-09 86.7 24.6 133 333-492 243-392 (741)
205 2z2n_A Virginiamycin B lyase; 98.4 0.00018 6E-09 69.6 25.3 148 310-492 145-294 (299)
206 3iuj_A Prolyl endopeptidase; h 98.4 1.2E-05 4E-10 91.0 19.4 134 333-492 155-313 (693)
207 2qe8_A Uncharacterized protein 98.4 4.7E-05 1.6E-09 78.1 22.2 173 306-491 68-276 (343)
208 3dr2_A Exported gluconolactona 98.3 8.3E-05 2.8E-09 74.5 22.4 132 333-492 67-223 (305)
209 3hrp_A Uncharacterized protein 98.3 0.00014 4.8E-09 77.4 25.4 165 311-507 176-363 (409)
210 3hrp_A Uncharacterized protein 98.2 3.8E-05 1.3E-09 81.8 19.1 154 306-491 132-296 (409)
211 2ghs_A AGR_C_1268P; regucalcin 98.2 0.00084 2.9E-08 68.3 26.6 130 333-492 71-209 (326)
212 3sjl_D Methylamine dehydrogena 98.0 0.00019 6.5E-09 77.1 19.5 135 333-492 59-207 (386)
213 3dr2_A Exported gluconolactona 98.0 0.00043 1.5E-08 69.3 19.6 129 333-490 169-303 (305)
214 2hz6_A Endoplasmic reticulum t 98.0 1E-06 3.5E-11 92.2 -0.0 147 317-505 49-200 (369)
215 1mda_H Methylamine dehydrogena 97.9 0.00025 8.7E-09 75.4 17.4 73 427-505 269-354 (368)
216 1kb0_A Quinohemoprotein alcoho 97.9 0.00044 1.5E-08 78.6 20.1 157 334-505 284-515 (677)
217 1qks_A Cytochrome CD1 nitrite 97.8 0.00018 6E-09 80.6 15.0 106 376-504 168-282 (567)
218 1yiq_A Quinohemoprotein alcoho 97.8 0.00034 1.2E-08 79.7 17.5 159 334-507 276-515 (689)
219 2mad_H Methylamine dehydrogena 97.8 0.0011 3.7E-08 69.9 19.7 165 313-503 132-356 (373)
220 3g4e_A Regucalcin; six bladed 97.8 0.0022 7.5E-08 64.0 20.9 157 311-505 59-237 (297)
221 1fwx_A Nitrous oxide reductase 97.8 0.00065 2.2E-08 76.8 18.7 132 332-492 174-360 (595)
222 3iuj_A Prolyl endopeptidase; h 97.8 0.00011 3.7E-09 83.1 12.4 108 359-492 132-267 (693)
223 2ece_A 462AA long hypothetical 97.7 0.0012 4E-08 72.6 19.4 138 333-492 164-351 (462)
224 3hxj_A Pyrrolo-quinoline quino 97.7 0.0032 1.1E-07 62.1 20.5 125 333-490 117-241 (330)
225 2qe8_A Uncharacterized protein 97.7 0.0038 1.3E-07 63.8 20.8 132 333-482 145-309 (343)
226 3hxj_A Pyrrolo-quinoline quino 97.7 0.0069 2.3E-07 59.7 21.9 140 312-491 143-282 (330)
227 2ghs_A AGR_C_1268P; regucalcin 97.6 0.017 5.7E-07 58.7 25.0 140 311-480 139-288 (326)
228 2mad_H Methylamine dehydrogena 97.6 0.0019 6.4E-08 68.0 18.0 131 334-491 48-194 (373)
229 3q7m_A Lipoprotein YFGL, BAMB; 97.4 0.0093 3.2E-07 60.9 19.3 140 333-503 198-343 (376)
230 2iwa_A Glutamine cyclotransfer 97.4 0.0061 2.1E-07 62.2 17.7 153 315-505 30-189 (266)
231 2iwa_A Glutamine cyclotransfer 97.3 0.029 1E-06 57.2 22.1 188 258-492 25-236 (266)
232 1kb0_A Quinohemoprotein alcoho 97.3 0.0023 7.7E-08 72.8 15.4 79 385-480 457-536 (677)
233 4a2l_A BT_4663, two-component 97.3 0.37 1.3E-05 54.8 35.6 152 308-492 359-525 (795)
234 1yiq_A Quinohemoprotein alcoho 97.2 0.0017 5.7E-08 74.1 12.9 80 384-480 454-534 (689)
235 3sjl_D Methylamine dehydrogena 97.2 0.0055 1.9E-07 65.8 16.1 130 333-492 109-255 (386)
236 3nol_A Glutamine cyclotransfer 97.2 0.0044 1.5E-07 63.4 14.5 150 316-505 52-209 (262)
237 3q7m_A Lipoprotein YFGL, BAMB; 97.2 0.0022 7.4E-08 65.6 12.2 127 333-490 249-375 (376)
238 3c75_H MADH, methylamine dehyd 97.1 0.011 3.9E-07 64.0 17.2 72 427-504 324-409 (426)
239 1fwx_A Nitrous oxide reductase 97.1 0.0012 4E-08 74.7 9.6 158 334-524 255-455 (595)
240 3mbr_X Glutamine cyclotransfer 97.1 0.019 6.4E-07 58.1 17.2 151 317-505 31-187 (243)
241 3nol_A Glutamine cyclotransfer 97.1 0.055 1.9E-06 55.3 20.8 134 333-492 107-253 (262)
242 3c75_H MADH, methylamine dehyd 97.0 0.0099 3.4E-07 64.5 15.5 132 333-491 99-246 (426)
243 3nok_A Glutaminyl cyclase; bet 97.0 0.0091 3.1E-07 61.3 13.8 147 317-505 65-218 (268)
244 1mda_H Methylamine dehydrogena 96.9 0.0023 8E-08 67.9 9.2 97 334-451 47-158 (368)
245 1npe_A Nidogen, entactin; glyc 96.9 0.077 2.6E-06 51.6 19.3 144 316-492 47-197 (267)
246 3v9f_A Two-component system se 96.8 1 3.6E-05 51.0 30.9 150 308-491 365-522 (781)
247 3mbr_X Glutamine cyclotransfer 96.8 0.24 8.4E-06 49.9 22.4 131 333-491 85-231 (243)
248 2xe4_A Oligopeptidase B; hydro 96.7 0.024 8.2E-07 64.9 16.4 131 333-491 201-352 (751)
249 1flg_A Protein (quinoprotein e 96.6 0.16 5.3E-06 56.8 21.4 60 333-397 291-358 (582)
250 2fp8_A Strictosidine synthase; 96.5 0.045 1.5E-06 54.9 15.2 155 306-492 20-215 (322)
251 2ad6_A Methanol dehydrogenase 96.4 0.026 8.8E-07 62.9 13.7 77 384-480 443-523 (571)
252 2ece_A 462AA long hypothetical 96.4 0.054 1.9E-06 59.5 15.8 146 315-491 93-287 (462)
253 1npe_A Nidogen, entactin; glyc 96.4 0.8 2.7E-05 44.3 24.1 174 306-523 80-261 (267)
254 3tc9_A Hypothetical hydrolase; 96.3 0.11 3.8E-06 55.6 17.2 152 306-492 138-300 (430)
255 1flg_A Protein (quinoprotein e 96.3 0.028 9.7E-07 62.8 13.0 79 384-480 465-545 (582)
256 2ad6_A Methanol dehydrogenase 96.2 0.065 2.2E-06 59.6 15.7 158 333-505 272-502 (571)
257 1kv9_A Type II quinohemoprotei 96.2 0.073 2.5E-06 60.3 15.8 160 334-507 271-498 (668)
258 2fp8_A Strictosidine synthase; 96.0 0.69 2.4E-05 46.1 20.8 130 333-492 165-312 (322)
259 2xe4_A Oligopeptidase B; hydro 96.0 0.014 4.6E-07 67.0 9.0 107 359-492 177-303 (751)
260 3nok_A Glutaminyl cyclase; bet 95.8 0.16 5.3E-06 52.1 15.1 126 333-484 116-255 (268)
261 4hw6_A Hypothetical protein, I 95.8 0.86 2.9E-05 48.8 21.6 166 306-491 229-431 (433)
262 4a2l_A BT_4663, two-component 95.6 1.9 6.5E-05 48.9 24.7 159 308-492 265-435 (795)
263 3v9f_A Two-component system se 95.4 4.8 0.00016 45.6 32.4 156 307-492 314-477 (781)
264 1w6s_A Methanol dehydrogenase 95.3 0.15 5.3E-06 57.3 14.0 78 383-480 451-532 (599)
265 2p4o_A Hypothetical protein; p 95.3 1.2 4.1E-05 44.3 19.1 143 315-492 41-197 (306)
266 4hw6_A Hypothetical protein, I 95.1 0.41 1.4E-05 51.3 16.1 152 305-491 139-302 (433)
267 1w6s_A Methanol dehydrogenase 95.0 0.47 1.6E-05 53.4 16.7 60 333-397 278-345 (599)
268 1kv9_A Type II quinohemoprotei 94.9 0.23 7.8E-06 56.2 13.8 156 333-501 127-337 (668)
269 3v64_C Agrin; beta propeller, 94.7 4.2 0.00015 41.7 21.9 145 315-491 83-232 (349)
270 3v65_B Low-density lipoprotein 94.6 2.2 7.6E-05 44.5 19.8 153 307-491 118-275 (386)
271 2xbg_A YCF48-like protein; pho 94.4 3.6 0.00012 41.7 20.4 64 423-486 206-272 (327)
272 3kya_A Putative phosphatase; s 94.0 1.1 3.9E-05 49.4 16.4 168 306-492 248-474 (496)
273 2xbg_A YCF48-like protein; pho 93.9 2.9 9.8E-05 42.4 18.4 66 423-490 251-319 (327)
274 1ijq_A LDL receptor, low-densi 93.9 6.1 0.00021 39.8 23.4 153 307-491 32-193 (316)
275 1ijq_A LDL receptor, low-densi 93.7 3.8 0.00013 41.3 18.8 157 334-524 11-175 (316)
276 3amr_A 3-phytase; beta-propell 93.6 5.1 0.00018 42.5 20.1 144 333-504 99-271 (355)
277 2p9w_A MAL S 1 allergenic prot 93.6 2.3 7.7E-05 44.9 17.2 173 301-492 9-214 (334)
278 2p4o_A Hypothetical protein; p 93.5 1.6 5.5E-05 43.4 15.4 121 340-491 19-145 (306)
279 3tc9_A Hypothetical hydrolase; 93.4 2.7 9.3E-05 44.7 17.8 158 316-491 237-428 (430)
280 3kya_A Putative phosphatase; s 93.2 2.1 7.1E-05 47.4 16.8 149 311-491 144-339 (496)
281 3qqz_A Putative uncharacterize 92.5 8.9 0.0003 38.5 19.1 138 333-491 49-202 (255)
282 3m0c_C LDL receptor, low-densi 92.2 12 0.00041 43.5 22.3 161 306-505 472-640 (791)
283 3v65_B Low-density lipoprotein 92.1 13 0.00044 38.7 22.4 163 306-505 160-326 (386)
284 3m0c_C LDL receptor, low-densi 91.8 23 0.00079 41.1 24.4 144 316-491 435-587 (791)
285 3sov_A LRP-6, low-density lipo 91.6 13 0.00044 37.8 21.1 143 317-491 47-195 (318)
286 3p5b_L Low density lipoprotein 91.1 17 0.00058 38.1 24.9 144 316-491 123-275 (400)
287 1k3i_A Galactose oxidase precu 90.5 2.9 9.9E-05 46.6 14.4 68 314-395 251-324 (656)
288 1n7d_A LDL receptor, low-densi 89.4 1.5 5.3E-05 49.9 11.2 99 376-491 466-569 (699)
289 3a9g_A Putative uncharacterize 89.0 8.2 0.00028 39.9 15.5 128 333-480 49-214 (354)
290 3sre_A PON1, serum paraoxonase 88.8 19 0.00066 37.8 18.3 65 424-492 167-251 (355)
291 3v64_C Agrin; beta propeller, 87.5 27 0.00093 35.6 23.0 162 306-505 117-283 (349)
292 3pbp_A Nucleoporin NUP82; beta 87.1 11 0.00038 41.2 15.4 119 431-567 30-158 (452)
293 1n7d_A LDL receptor, low-densi 87.1 4.6 0.00016 46.0 13.1 161 306-504 454-621 (699)
294 3amr_A 3-phytase; beta-propell 86.3 21 0.0007 37.9 16.7 150 316-492 39-209 (355)
295 3sbq_A Nitrous-oxide reductase 86.1 1.9 6.4E-05 48.8 8.9 131 427-566 328-488 (638)
296 3pbp_A Nucleoporin NUP82; beta 85.6 46 0.0016 36.4 20.4 162 257-447 24-208 (452)
297 3ei3_A DNA damage-binding prot 84.1 83 0.0028 38.1 31.7 130 333-490 492-633 (1158)
298 4a0p_A LRP6, LRP-6, low-densit 83.1 65 0.0022 36.1 21.1 133 333-492 59-196 (628)
299 3p5b_L Low density lipoprotein 81.9 53 0.0018 34.3 24.7 173 306-520 160-339 (400)
300 1cru_A Protein (soluble quinop 80.9 53 0.0018 35.2 17.6 31 461-492 226-258 (454)
301 1k3i_A Galactose oxidase precu 80.1 11 0.00038 41.8 12.3 102 375-492 198-322 (656)
302 3das_A Putative oxidoreductase 79.2 32 0.0011 36.0 14.7 130 333-484 53-224 (347)
303 1tl2_A L10, protein (tachylect 78.9 43 0.0015 33.6 14.7 105 360-485 92-202 (236)
304 1bpo_A Protein (clathrin); cla 76.4 75 0.0026 35.1 16.8 150 306-491 67-233 (494)
305 3sov_A LRP-6, low-density lipo 75.7 71 0.0024 32.2 24.0 160 306-504 80-245 (318)
306 3s25_A Hypothetical 7-bladed b 74.5 20 0.00069 36.4 11.3 127 318-491 27-174 (302)
307 1tl2_A L10, protein (tachylect 74.3 7.2 0.00025 39.2 7.6 106 359-486 44-156 (236)
308 1ddw_A GLGF-domain protein hom 72.7 29 0.001 31.1 10.6 90 73-187 10-109 (120)
309 2be1_A Serine/threonine-protei 71.5 2.5 8.5E-05 44.4 3.7 144 333-492 67-230 (339)
310 3sre_A PON1, serum paraoxonase 71.1 1E+02 0.0034 32.2 16.0 145 303-480 110-283 (355)
311 2ism_A Putative oxidoreductase 69.5 25 0.00086 36.0 10.8 98 360-480 35-151 (352)
312 4a0p_A LRP6, LRP-6, low-densit 69.2 1.5E+02 0.0051 33.1 20.3 155 333-523 15-176 (628)
313 1xi4_A Clathrin heavy chain; a 68.4 75 0.0026 39.9 15.9 133 333-491 86-233 (1630)
314 2ism_A Putative oxidoreductase 67.7 17 0.00057 37.3 9.0 66 425-491 34-112 (352)
315 3ott_A Two-component system se 67.2 1.6E+02 0.0055 32.8 23.1 153 310-492 423-585 (758)
316 1i2h_A PSD-ZIP45(homer-1C/VESL 66.1 27 0.00093 33.3 9.3 96 69-189 11-116 (168)
317 1evh_A WH1 domain, protein (ME 66.0 51 0.0018 29.0 10.6 86 74-185 11-108 (112)
318 1xke_A RAN-binding protein 2; 65.6 12 0.00039 34.0 6.4 60 128-187 46-120 (130)
319 1egx_A VAsp, vasodilator-stimu 65.0 19 0.00065 32.0 7.6 75 88-185 22-110 (115)
320 3a9g_A Putative uncharacterize 64.2 16 0.00053 37.8 8.0 66 425-491 32-112 (354)
321 4hat_B RAN-specific GTPase-act 62.6 18 0.0006 33.4 7.1 60 128-187 61-136 (140)
322 3s94_A LRP-6, low-density lipo 62.5 1.9E+02 0.0067 32.1 18.4 133 333-491 62-200 (619)
323 3ott_A Two-component system se 62.0 1.2E+02 0.0042 33.8 15.4 146 309-491 66-218 (758)
324 4gq2_M Nucleoporin NUP120; bet 60.9 23 0.00078 41.9 9.5 36 465-504 237-273 (950)
325 3s25_A Hypothetical 7-bladed b 60.8 1.4E+02 0.0049 30.0 15.3 108 332-480 87-200 (302)
326 1rrp_B Nuclear pore complex pr 60.4 12 0.00043 33.9 5.6 57 128-184 60-131 (134)
327 3m1i_B RAN-specific GTPase-act 59.3 20 0.00068 34.9 7.1 60 128-187 112-187 (191)
328 3n7c_A ABR034WP; nuclear pore 57.9 22 0.00074 32.3 6.8 58 128-185 50-119 (130)
329 2g8s_A Glucose/sorbosone dehyd 56.7 92 0.0032 31.8 12.2 55 425-480 133-214 (353)
330 4gq2_M Nucleoporin NUP120; bet 54.9 1.9E+02 0.0065 34.1 15.9 31 423-453 237-268 (950)
331 3sbq_A Nitrous-oxide reductase 53.6 47 0.0016 37.7 9.8 143 334-492 299-477 (638)
332 3das_A Putative oxidoreductase 52.3 1.7E+02 0.0057 30.5 13.4 66 425-490 35-111 (347)
333 2ifs_A N-WAsp, wiskott-aldrich 51.9 69 0.0024 30.5 9.4 86 74-187 65-159 (169)
334 1mke_A WIP - N-WAsp, fusion pr 51.9 79 0.0027 29.6 9.6 84 74-185 48-140 (152)
335 2p9w_A MAL S 1 allergenic prot 49.2 2.5E+02 0.0086 29.3 16.4 153 376-566 26-214 (334)
336 2crf_A RAN binding protein 3; 48.6 28 0.00096 32.3 6.0 57 128-185 69-137 (150)
337 1qc6_A EVH1 domain from ENA/VA 48.3 1.1E+02 0.0036 27.5 9.7 47 137-187 61-111 (130)
338 2g8s_A Glucose/sorbosone dehyd 48.2 42 0.0014 34.4 8.0 58 425-482 21-89 (353)
339 2y8g_A Ranbp3-B, RAN-binding p 48.1 25 0.00084 32.2 5.5 57 128-185 57-125 (138)
340 4a9v_A PHOX; hydrolase, beta-p 47.6 28 0.00097 39.3 6.9 53 427-480 481-547 (592)
341 2vpj_A Kelch-like protein 12; 45.9 2.1E+02 0.0071 27.4 13.1 67 316-395 112-185 (301)
342 2be1_A Serine/threonine-protei 45.7 38 0.0013 35.3 7.2 115 319-460 12-138 (339)
343 1k5d_B RAN-specific GTPase-act 45.6 41 0.0014 32.9 6.9 60 128-187 86-161 (201)
344 4fhn_B Nucleoporin NUP120; pro 45.5 27 0.00091 42.0 6.7 36 465-504 239-275 (1139)
345 3zwu_A Alkaline phosphatase PH 45.3 36 0.0012 38.3 7.4 53 427-480 481-547 (592)
346 3qqz_A Putative uncharacterize 44.5 2.5E+02 0.0084 27.8 22.1 191 265-489 39-249 (255)
347 2ec1_A Nucleoporin 50 kDa; ran 39.4 51 0.0017 29.6 6.1 56 128-184 48-122 (125)
348 3ii7_A Kelch-like protein 7; p 38.8 2.7E+02 0.0093 26.7 13.3 30 316-345 101-130 (306)
349 2wg3_C Hedgehog-interacting pr 37.9 1.7E+02 0.0059 31.5 11.1 58 425-482 17-92 (463)
350 3s94_A LRP-6, low-density lipo 37.9 4.6E+02 0.016 29.1 24.5 192 255-492 39-242 (619)
351 1xod_A Spred1; sprouty, EVH1, 36.8 1.4E+02 0.0049 26.4 8.6 45 137-185 64-112 (118)
352 2llh_A Nucleophosmin; nucleola 39.5 9 0.00031 31.9 0.0 42 40-81 16-59 (74)
353 1cru_A Protein (soluble quinop 33.0 1E+02 0.0036 32.9 8.4 58 425-482 30-100 (454)
354 2oqb_A Histone-arginine methyl 31.3 64 0.0022 29.0 5.1 33 153-185 73-106 (117)
355 2xzh_A Clathrin heavy chain 1; 30.2 5.2E+02 0.018 27.4 24.7 150 306-491 68-234 (365)
356 3f7f_A Nucleoporin NUP120; nuc 30.0 1.2E+02 0.0041 35.1 8.5 75 377-453 173-252 (729)
357 4fhn_B Nucleoporin NUP120; pro 29.3 1.6E+02 0.0055 35.3 9.9 33 312-350 244-276 (1139)
358 1zgk_A Kelch-like ECH-associat 26.8 4.4E+02 0.015 25.4 11.2 30 316-345 70-102 (308)
359 3f7f_A Nucleoporin NUP120; nuc 26.2 1.9E+02 0.0065 33.5 9.3 30 472-505 228-258 (729)
360 2vpj_A Kelch-like protein 12; 23.9 3.8E+02 0.013 25.5 10.0 69 316-395 159-232 (301)
361 2xn4_A Kelch-like protein 2; s 23.1 4.9E+02 0.017 24.7 13.6 67 316-395 61-134 (302)
362 4asc_A Kelch repeat and BTB do 22.8 5.2E+02 0.018 24.9 12.3 29 316-344 98-128 (315)
363 3ei3_A DNA damage-binding prot 21.6 1.1E+03 0.038 28.3 17.7 133 333-490 904-1059(1158)
364 4asc_A Kelch repeat and BTB do 21.0 5E+02 0.017 25.0 10.3 70 316-395 148-222 (315)
365 3uc1_A DNA gyrase subunit A; D 20.4 6.9E+02 0.024 25.4 16.9 153 432-624 109-270 (327)
366 2woz_A Kelch repeat and BTB do 20.0 5.3E+02 0.018 24.9 10.2 30 316-345 158-187 (318)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=3.9e-29 Score=251.89 Aligned_cols=256 Identities=13% Similarity=0.127 Sum_probs=191.2
Q ss_pred CcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 256 VQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
..+.++.+ +|+.+++.| .+|.||...... ....+..|. .|...+.+.+++++|++++.|
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~-----~~~~~~~~~-------~~v~~~~~~~~~~~l~s~s~d----- 76 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV-----EVRSIQVTE-------TPVRAGKFIARKNWIIVGSDD----- 76 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-----EEEEEECCS-------SCEEEEEEEGGGTEEEEEETT-----
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCc-----eeEEeeccC-------CcEEEEEEeCCCCEEEEECCC-----
Confidence 35788888 899888875 589999865532 223344441 234445555666778888775
Q ss_pred CCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 332 APGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
++|++||+.+|+++.++.+|.+.| ..++|+|+ +.++++|+.|++|++||++.+..+.+.+.+|...
T Consensus 77 -~~i~vwd~~~~~~~~~~~~h~~~v--~~~~~~~~--------~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~--- 142 (304)
T 2ynn_A 77 -FRIRVFNYNTGEKVVDFEAHPDYI--RSIAVHPT--------KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF--- 142 (304)
T ss_dssp -SEEEEEETTTCCEEEEEECCSSCE--EEEEECSS--------SSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSC---
T ss_pred -CEEEEEECCCCcEEEEEeCCCCcE--EEEEEcCC--------CCEEEEECCCCeEEEEECCCCcchhhhhcccCCc---
Confidence 799999999999999999999986 46699998 6799999999999999999875656677666543
Q ss_pred cccccccccCcceEEEEECC-CC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECC--CCCEEEE-EcCCcE
Q 047036 412 WTQGHQFSRGTNFQCFASTG-DG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTY--DGKWILG-TTDTYL 486 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~-dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSp--DGk~LlS-S~D~tI 486 (634)
+.|++++| ++ .||+||.||+|||||+.+.........+|...|..++|+| +|++|++ +.|++|
T Consensus 143 ------------v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i 210 (304)
T 2ynn_A 143 ------------VMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI 210 (304)
T ss_dssp ------------EEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEE
T ss_pred ------------EEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeE
Confidence 57899998 55 7999999999999998765322334457778999999987 8899999 999999
Q ss_pred EEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeCh
Q 047036 487 ILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQ 566 (634)
Q Consensus 487 rLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~ 566 (634)
+|||+. .++++..|.+|.... ..+.|+|. + ...+.++.|+.|.+||+.
T Consensus 211 ~iWd~~----~~~~~~~~~~h~~~v------------------~~~~~~p~--------~--~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 211 KIWDYQ----TKSCVATLEGHMSNV------------------SFAVFHPT--------L--PIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp EEEETT----TTEEEEEEECCSSCE------------------EEEEECSS--------S--SEEEEEETTSCEEEEETT
T ss_pred EEEeCC----CCccceeeCCCCCCE------------------EEEEECCC--------C--CEEEEEcCCCeEEEEECC
Confidence 999986 688888888887421 12344443 2 234444789999999987
Q ss_pred hhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 567 QVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 567 ~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
. ++.. ..+..+.+.|..+.|
T Consensus 259 ~---~~~~-------------~~~~~~~~~~~~~~~ 278 (304)
T 2ynn_A 259 T---YKVE-------------KTLNVGLERSWCIAT 278 (304)
T ss_dssp T---CCEE-------------EEECCSSSSEEEEEE
T ss_pred C---Ccee-------------eeccCCCccEEEEEE
Confidence 3 2221 356666777776666
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=1.8e-28 Score=258.49 Aligned_cols=254 Identities=12% Similarity=0.158 Sum_probs=196.9
Q ss_pred CcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 256 VQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
..+.++.+ +++.+++.| .+|.||....+. ....+.+|. .+...+.+++++++|++++.|
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~-----~~~~l~~h~-------~~V~~v~~~~~~~~l~sgs~D----- 171 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGD-----FERTLKGHT-------DSVQDISFDHSGKLLASCSAD----- 171 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCC-----CCEEECCCS-------SCEEEEEECTTSSEEEEEETT-----
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----EEEEEeccC-------CcEEEEEEcCCCCEEEEEeCC-----
Confidence 34778888 888888876 589999875543 233556662 123333444455677788775
Q ss_pred CCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 332 APGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
++|++||+.++++++++.+|...| ..++|+|+ +..+++|+.|++|++||++++.+ +.++.+|...
T Consensus 172 -~~i~iwd~~~~~~~~~~~~h~~~V--~~v~~~p~--------~~~l~s~s~D~~i~~wd~~~~~~-~~~~~~h~~~--- 236 (410)
T 1vyh_C 172 -MTIKLWDFQGFECIRTMHGHDHNV--SSVSIMPN--------GDHIVSASRDKTIKMWEVQTGYC-VKTFTGHREW--- 236 (410)
T ss_dssp -SCCCEEETTSSCEEECCCCCSSCE--EEEEECSS--------SSEEEEEETTSEEEEEETTTCCE-EEEEECCSSC---
T ss_pred -CeEEEEeCCCCceeEEEcCCCCCE--EEEEEeCC--------CCEEEEEeCCCeEEEEECCCCcE-EEEEeCCCcc---
Confidence 799999999999999999999986 46699998 67999999999999999998764 6777766543
Q ss_pred cccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCC----------------
Q 047036 412 WTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYD---------------- 474 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpD---------------- 474 (634)
+.+++++++| +||+||.||+|||||+.+. .++..|.+|..+|.+|+|+|+
T Consensus 237 ------------v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 303 (410)
T 1vyh_C 237 ------------VRMVRPNQDGTLIASCSNDQTVRVWVVATK-ECKAELREHRHVVECISWAPESSYSSISEATGSETKK 303 (410)
T ss_dssp ------------EEEEEECTTSSEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC---
T ss_pred ------------EEEEEECCCCCEEEEEcCCCeEEEEECCCC-ceeeEecCCCceEEEEEEcCcccccchhhhccccccc
Confidence 4688899999 7999999999999999886 477889999999999999997
Q ss_pred ----CCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCc
Q 047036 475 ----GKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQE 549 (634)
Q Consensus 475 ----Gk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E 549 (634)
|.+|++ +.|++|+|||+. +|+++..|.+|.+.. ..+.|+|. | .
T Consensus 304 ~~~~g~~l~sgs~D~~i~iwd~~----~~~~~~~~~~h~~~v------------------~~v~~~~~--------g--~ 351 (410)
T 1vyh_C 304 SGKPGPFLLSGSRDKTIKMWDVS----TGMCLMTLVGHDNWV------------------RGVLFHSG--------G--K 351 (410)
T ss_dssp ----CCEEEEEETTSEEEEEETT----TTEEEEEEECCSSCE------------------EEEEECSS--------S--S
T ss_pred cCCCCCEEEEEeCCCeEEEEECC----CCceEEEEECCCCcE------------------EEEEEcCC--------C--C
Confidence 779999 999999999986 688888888876411 12444443 3 2
Q ss_pred eEEEEEcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 550 RHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 550 ~~IvtStg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
..++++.|+.|.+||+.. ++. ...+..|...|.++.|
T Consensus 352 ~l~s~s~D~~i~vwd~~~---~~~-------------~~~~~~h~~~v~~l~~ 388 (410)
T 1vyh_C 352 FILSCADDKTLRVWDYKN---KRC-------------MKTLNAHEHFVTSLDF 388 (410)
T ss_dssp CEEEEETTTEEEEECCTT---SCC-------------CEEEECCSSCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCC---Cce-------------EEEEcCCCCcEEEEEE
Confidence 345557899999999863 222 1467889999998888
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=1.3e-27 Score=248.57 Aligned_cols=238 Identities=10% Similarity=0.019 Sum_probs=171.8
Q ss_pred EEEeee-CCCeEEEec--CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCCCCC
Q 047036 258 SLTLGA-LDNSFLVSD--LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAP 333 (634)
Q Consensus 258 ~LavG~-~D~sfvv~G--~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~ 333 (634)
+.++++ +|+.+++.+ ..|.||....+.... .....+.+|. .+.+++|+| ++++|++++.| +
T Consensus 85 v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~-~~~~~~~~H~~~V~~v~~sp--------dg~~l~sgs~d------~ 149 (344)
T 4gqb_B 85 VADLTWVGERGILVASDSGAVELWELDENETLI-VSKFCKYEHDDIVSTVSVLS--------SGTQAVSGSKD------I 149 (344)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEEECTTSSCE-EEEEEEECCSSCEEEEEECT--------TSSEEEEEETT------S
T ss_pred EEEEEEeCCCeEEEEECCCEEEEEeccCCCcee-EeeccccCCCCCEEEEEECC--------CCCEEEEEeCC------C
Confidence 677777 787777654 589999876544211 1122334552 234455555 55667777765 7
Q ss_pred cEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccc
Q 047036 334 GVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWT 413 (634)
Q Consensus 334 TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~ 413 (634)
+|++||+++|+++++|.+|.+.| ..++|+|++ ..++++|+.|++|++||+++++. +..+..+.
T Consensus 150 ~i~iwd~~~~~~~~~~~~h~~~V--~~~~~~~~~-------~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~------- 212 (344)
T 4gqb_B 150 CIKVWDLAQQVVLSSYRAHAAQV--TCVAASPHK-------DSVFLSCSEDNRILLWDTRCPKP-ASQIGCSA------- 212 (344)
T ss_dssp CEEEEETTTTEEEEEECCCSSCE--EEEEECSSC-------TTEEEEEETTSCEEEEETTSSSC-EEECC----------
T ss_pred eEEEEECCCCcEEEEEcCcCCce--EEEEecCCC-------CCceeeeccccccccccccccce-eeeeecce-------
Confidence 99999999999999999999986 456999983 25789999999999999998764 44543111
Q ss_pred cccccccCcceEEEEECCCC--eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCC-CEEEE-EcCCcEEEE
Q 047036 414 QGHQFSRGTNFQCFASTGDG--SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDG-KWILG-TTDTYLILI 489 (634)
Q Consensus 414 ~g~~y~~~~~fssva~s~dG--~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDG-k~LlS-S~D~tIrLW 489 (634)
....+.+++++|++ +||+|+.||+|||||+.+++ +...|.+|..+|++|+||||| ++||+ +.|++|+||
T Consensus 213 ------~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vw 285 (344)
T 4gqb_B 213 ------PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS-CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVL 285 (344)
T ss_dssp -------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred ------eeccceeeeecCCCCcceEEeccCCcEEEEECCCCc-EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEE
Confidence 22346788998854 68999999999999998874 778899999999999999999 57888 899999999
Q ss_pred EcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEE-EcCCeEEEEeChh
Q 047036 490 CTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVA-TVGKFSVIWDFQQ 567 (634)
Q Consensus 490 D~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~~ 567 (634)
|+. .+++ ..+.+|.+.. ..+.|+|. | ...|++ |.|+.|++|++..
T Consensus 286 d~~----~~~~-~~~~~H~~~V------------------~~v~~sp~--------~--~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 286 DSS----LSEL-FRSQAHRDFV------------------RDATWSPL--------N--HSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp CTT----CCEE-EEECCCSSCE------------------EEEEECSS--------S--TTEEEEEETTSCEEEEECCC
T ss_pred ECC----CCcE-EEEcCCCCCE------------------EEEEEeCC--------C--CeEEEEEcCCCeEEEEECCC
Confidence 975 4443 3466665311 23555554 2 245655 6799999999863
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=4.1e-28 Score=252.23 Aligned_cols=228 Identities=11% Similarity=0.083 Sum_probs=165.2
Q ss_pred eeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEE----EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC
Q 047036 309 KALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTE----WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD 384 (634)
Q Consensus 309 ~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~----lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D 384 (634)
..+.+.+++ .|++++.| ++|++||+++|+.+.. +.+|.+.| ..++|+|+ +.+|++|+.|
T Consensus 86 ~~~~~s~d~-~l~~~s~d------g~v~lWd~~~~~~~~~~~~~~~~H~~~V--~~v~~spd--------g~~l~sgs~d 148 (344)
T 4gqb_B 86 ADLTWVGER-GILVASDS------GAVELWELDENETLIVSKFCKYEHDDIV--STVSVLSS--------GTQAVSGSKD 148 (344)
T ss_dssp EEEEEETTT-EEEEEETT------SEEEEEEECTTSSCEEEEEEEECCSSCE--EEEEECTT--------SSEEEEEETT
T ss_pred EEEEEeCCC-eEEEEECC------CEEEEEeccCCCceeEeeccccCCCCCE--EEEEECCC--------CCEEEEEeCC
Confidence 344445553 35556554 7999999999986554 45899986 46699998 6899999999
Q ss_pred CeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC--eEEEEECCCcEEEEeccccccccccc--c
Q 047036 385 NRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG--SIVVGSLDGKIRLYSKTSMRQAKTAF--P 460 (634)
Q Consensus 385 ~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG--~IASGS~DGtIRLWD~~t~r~akt~L--~ 460 (634)
++|++||++++. +++++.+|... +.++++++++ .||+||.||+|||||+.+++ ....+ .
T Consensus 149 ~~i~iwd~~~~~-~~~~~~~h~~~---------------V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~ 211 (344)
T 4gqb_B 149 ICIKVWDLAQQV-VLSSYRAHAAQ---------------VTCVAASPHKDSVFLSCSEDNRILLWDTRCPK-PASQIGCS 211 (344)
T ss_dssp SCEEEEETTTTE-EEEEECCCSSC---------------EEEEEECSSCTTEEEEEETTSCEEEEETTSSS-CEEECC--
T ss_pred CeEEEEECCCCc-EEEEEcCcCCc---------------eEEEEecCCCCCceeeeccccccccccccccc-eeeeeecc
Confidence 999999999864 56788777654 5788999887 58999999999999998764 44444 4
Q ss_pred CCCCCeEEEEECCC-CCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCccccccc
Q 047036 461 GLGSPITHVDVTYD-GKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGH 538 (634)
Q Consensus 461 GH~d~ItsVdfSpD-Gk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~ 538 (634)
.|+..|++|+|+|+ +++|++ +.|++|+|||++ .++++..|.+|.... ..+.|+|.
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~----~~~~~~~~~~h~~~v------------------~~v~fsp~- 268 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK----STSCVLSSAVHSQCV------------------TGLVFSPH- 268 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESC----C--CCEEEECCSSCE------------------EEEEECSS-
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECC----CCcEEEEEcCCCCCE------------------EEEEEccC-
Confidence 67788999999995 567777 889999999986 688888888886411 12455544
Q ss_pred ccccccCCCCceEEEE-EcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeeccccCc-c-ccCCCCCC
Q 047036 539 FSWVTENGKQERHLVA-TVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHDK-F-AVTDSPEA 615 (634)
Q Consensus 539 Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~~d~-f-~~~~~~~~ 615 (634)
| .++|++ |.|+.|+|||+.. ++ ++++..|.+.|.++.|-.++ + ..+++.|.
T Consensus 269 -------g--~~~lasgs~D~~i~vwd~~~---~~--------------~~~~~~H~~~V~~v~~sp~~~~llas~s~D~ 322 (344)
T 4gqb_B 269 -------S--VPFLASLSEDCSLAVLDSSL---SE--------------LFRSQAHRDFVRDATWSPLNHSLLTTVGWDH 322 (344)
T ss_dssp -------S--SCCEEEEETTSCEEEECTTC---CE--------------EEEECCCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred -------C--CeEEEEEeCCCeEEEEECCC---Cc--------------EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCC
Confidence 2 245654 7899999999762 22 34678899999999993332 2 22444466
Q ss_pred CEEE
Q 047036 616 PLVV 619 (634)
Q Consensus 616 ~iiv 619 (634)
.|++
T Consensus 323 ~v~~ 326 (344)
T 4gqb_B 323 QVVH 326 (344)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 6665
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=3e-27 Score=241.65 Aligned_cols=255 Identities=12% Similarity=0.179 Sum_probs=186.1
Q ss_pred cEEEeee-C----CCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCC
Q 047036 257 QSLTLGA-L----DNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDG 328 (634)
Q Consensus 257 ~~LavG~-~----D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~ 328 (634)
.+.++++ + ++.+++.| .+|.||......+. ....+.+|. .+...+.++.+..++++++.|
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~---~~~~l~gh~-------~~v~~~~~~~~~~~l~s~s~D-- 101 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLD---LQWSLEGHQ-------LGVVSVDISHTLPIAASSSLD-- 101 (321)
T ss_dssp CEEEEEEC-------CEEEEEETTSCEEEEEEETTEEE---EEEEECCCS-------SCEEEEEECSSSSEEEEEETT--
T ss_pred cEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCee---eeeeeccCC-------CCEEEEEECCCCCEEEEEeCC--
Confidence 3555555 3 34566654 57888886543211 122455652 122233344455667777765
Q ss_pred CCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCC
Q 047036 329 KPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSP 408 (634)
Q Consensus 329 ~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~ 408 (634)
++|++||+++|+++..+.+|...| ..++|+|+ ++.+++|+.|++|++||++.+.. +..+..|.
T Consensus 102 ----~~i~lWd~~~~~~~~~~~~~~~~~--~~~~~spd--------g~~l~~g~~dg~v~i~~~~~~~~-~~~~~~~~-- 164 (321)
T 3ow8_A 102 ----AHIRLWDLENGKQIKSIDAGPVDA--WTLAFSPD--------SQYLATGTHVGKVNIFGVESGKK-EYSLDTRG-- 164 (321)
T ss_dssp ----SEEEEEETTTTEEEEEEECCTTCC--CCEEECTT--------SSEEEEECTTSEEEEEETTTCSE-EEEEECSS--
T ss_pred ----CcEEEEECCCCCEEEEEeCCCccE--EEEEECCC--------CCEEEEEcCCCcEEEEEcCCCce-eEEecCCC--
Confidence 799999999999999999998876 45699998 67999999999999999998754 34554332
Q ss_pred ccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcE
Q 047036 409 VLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYL 486 (634)
Q Consensus 409 V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tI 486 (634)
..+.+++++|+| +||+|+.||+|+|||+.+++ ....|.+|..+|++|+|+|||++|++ +.|++|
T Consensus 165 -------------~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i 230 (321)
T 3ow8_A 165 -------------KFILSIAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYI 230 (321)
T ss_dssp -------------SCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCCCEEEECTTSCEEEEECTTSCE
T ss_pred -------------ceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-EEEEEcccCCceeEEEEcCCCCEEEEEcCCCeE
Confidence 236789999999 79999999999999998864 77789999999999999999999999 889999
Q ss_pred EEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeCh
Q 047036 487 ILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQ 566 (634)
Q Consensus 487 rLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~ 566 (634)
+|||+. .++.+..|.+|.+.. ..+.|+|. | ...++++.|+.|.+||+.
T Consensus 231 ~iwd~~----~~~~~~~~~~h~~~v------------------~~~~~sp~--------~--~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 231 KIYDVQ----HANLAGTLSGHASWV------------------LNVAFCPD--------D--THFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp EEEETT----TCCEEEEECCCSSCE------------------EEEEECTT--------S--SEEEEEETTSCEEEEETT
T ss_pred EEEECC----CcceeEEEcCCCCce------------------EEEEECCC--------C--CEEEEEeCCCcEEEEeCC
Confidence 999986 567777777775311 12445544 3 234455789999999986
Q ss_pred hhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 567 QVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 567 ~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
. ++. ...+..+.+.|..+.|
T Consensus 279 ~---~~~-------------~~~~~~h~~~v~~v~~ 298 (321)
T 3ow8_A 279 T---RTC-------------VHTFFDHQDQVWGVKY 298 (321)
T ss_dssp T---TEE-------------EEEECCCSSCEEEEEE
T ss_pred C---CEE-------------EEEEcCCCCcEEEEEE
Confidence 3 221 2467788889998888
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=2.4e-26 Score=229.56 Aligned_cols=257 Identities=18% Similarity=0.266 Sum_probs=189.9
Q ss_pred CcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 256 VQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
....++.+ +|+.+++.| ..|.||...... ....+.+|. .+...+.+++++++|++++.|
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~-----~~~~~~~h~-------~~v~~~~~~~~~~~l~s~~~d----- 86 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FEKTISGHK-------LGISDVAWSSDSNLLVSASDD----- 86 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-----EEEEECCCS-------SCEEEEEECTTSSEEEEEETT-----
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc-----cchhhccCC-------CceEEEEEcCCCCEEEEECCC-----
Confidence 34777888 888888765 578899865543 233455552 123334445556777777765
Q ss_pred CCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 332 APGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
++|++||+.+++++..+.+|...| ..++|+|+ +.++++|+.|++|++||++++.+ +..+.+|..
T Consensus 87 -~~i~vwd~~~~~~~~~~~~~~~~v--~~~~~~~~--------~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~---- 150 (312)
T 4ery_A 87 -KTLKIWDVSSGKCLKTLKGHSNYV--FCCNFNPQ--------SNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSD---- 150 (312)
T ss_dssp -SEEEEEETTTCCEEEEEECCSSCE--EEEEECSS--------SSEEEEEETTSCEEEEETTTCCE-EEEECCCSS----
T ss_pred -CEEEEEECCCCcEEEEEcCCCCCE--EEEEEcCC--------CCEEEEEeCCCcEEEEECCCCEE-EEEecCCCC----
Confidence 799999999999999999999976 45699998 67999999999999999998654 566655443
Q ss_pred cccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEE
Q 047036 412 WTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILI 489 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLW 489 (634)
.+++++++++| +||+|+.||.|+|||+.+++........|..+|..++|+|+|++|++ +.|+.|+||
T Consensus 151 -----------~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iw 219 (312)
T 4ery_A 151 -----------PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 219 (312)
T ss_dssp -----------CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred -----------cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence 46789999998 79999999999999998764333445578889999999999999999 899999999
Q ss_pred EcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEE-EcCCeEEEEeChhh
Q 047036 490 CTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVA-TVGKFSVIWDFQQV 568 (634)
Q Consensus 490 D~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~~v 568 (634)
|+. +++++..|.+|.... ......|+. . ...+|++ +.|+.|.+||+..
T Consensus 220 d~~----~~~~~~~~~~~~~~~---------------------~~~~~~~~~-~----~~~~l~sg~~dg~i~vwd~~~- 268 (312)
T 4ery_A 220 DYS----KGKCLKTYTGHKNEK---------------------YCIFANFSV-T----GGKWIVSGSEDNLVYIWNLQT- 268 (312)
T ss_dssp ETT----TTEEEEEECSSCCSS---------------------SCCCEEEEC-S----SSCEEEECCTTSCEEEEETTT-
T ss_pred ECC----CCcEEEEEEecCCce---------------------EEEEEEEEe-C----CCcEEEEECCCCEEEEEECCC-
Confidence 986 677777777775421 001112221 1 1245555 6799999999863
Q ss_pred hcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 569 KNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 569 ~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
++. ...+..+.+.|..+.|
T Consensus 269 --~~~-------------~~~~~~h~~~v~~~~~ 287 (312)
T 4ery_A 269 --KEI-------------VQKLQGHTDVVISTAC 287 (312)
T ss_dssp --CCE-------------EEEECCCSSCEEEEEE
T ss_pred --chh-------------hhhhhccCCcEEEEee
Confidence 222 2467788888888887
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=6e-27 Score=237.91 Aligned_cols=206 Identities=15% Similarity=0.195 Sum_probs=154.4
Q ss_pred cEEEeee-CC-CeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 257 QSLTLGA-LD-NSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 257 ~~LavG~-~D-~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
.+.++++ ++ ..+++.| .+|.+|...............|.+|. .+...+.+++++++|++++.|
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~-------~~v~~~~~s~dg~~l~s~s~D----- 86 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHS-------HIVQDCTLTADGAYALSASWD----- 86 (319)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCS-------SCEEEEEECTTSSEEEEEETT-----
T ss_pred eEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCc-------ccEEEEEECCCCCEEEEEeCC-----
Confidence 3566666 43 3566654 57888876432212112234566663 223334445556777888775
Q ss_pred CCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 332 APGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
++|++||+++|++++++.+|...| ..++|+|+ +.++++|+.|++|++||++.. .+..+.+|...
T Consensus 87 -~~v~~wd~~~~~~~~~~~~h~~~v--~~~~~~~~--------~~~l~s~s~D~~i~vwd~~~~--~~~~~~~h~~~--- 150 (319)
T 3frx_A 87 -KTLRLWDVATGETYQRFVGHKSDV--MSVDIDKK--------ASMIISGSRDKTIKVWTIKGQ--CLATLLGHNDW--- 150 (319)
T ss_dssp -SEEEEEETTTTEEEEEEECCSSCE--EEEEECTT--------SCEEEEEETTSCEEEEETTSC--EEEEECCCSSC---
T ss_pred -CEEEEEECCCCCeeEEEccCCCcE--EEEEEcCC--------CCEEEEEeCCCeEEEEECCCC--eEEEEeccCCc---
Confidence 799999999999999999999986 45699998 679999999999999999742 45677666544
Q ss_pred cccccccccCcceEEEEECC------CC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcC
Q 047036 412 WTQGHQFSRGTNFQCFASTG------DG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTD 483 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~------dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D 483 (634)
+.++++.| ++ .|++|+.|++||+||+.+.+ ....+.+|..+|++|+|+|||++|++ +.|
T Consensus 151 ------------v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~sp~g~~l~s~~~d 217 (319)
T 3frx_A 151 ------------VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ-IEADFIGHNSNINTLTASPDGTLIASAGKD 217 (319)
T ss_dssp ------------EEEEEECCC------CCEEEEEETTSCEEEEETTTTE-EEEEECCCCSCEEEEEECTTSSEEEEEETT
T ss_pred ------------EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch-hheeecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 45666766 34 69999999999999998763 66788999999999999999999999 899
Q ss_pred CcEEEEEcccccCCCCeeeeecCC
Q 047036 484 TYLILICTLFSDKDGKTKTGFSGR 507 (634)
Q Consensus 484 ~tIrLWD~~~~~~~G~~~~gF~gh 507 (634)
++|+|||+. .++++..+..+
T Consensus 218 g~i~iwd~~----~~~~~~~~~~~ 237 (319)
T 3frx_A 218 GEIMLWNLA----AKKAMYTLSAQ 237 (319)
T ss_dssp CEEEEEETT----TTEEEEEEECC
T ss_pred CeEEEEECC----CCcEEEEecCC
Confidence 999999986 56777777654
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=4.6e-27 Score=236.74 Aligned_cols=217 Identities=13% Similarity=0.090 Sum_probs=161.4
Q ss_pred cccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEE
Q 047036 301 IGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFL 380 (634)
Q Consensus 301 ~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laS 380 (634)
.+.+|+|++ .+|++++.| ++|++||+++|+.++.+.+|...| ..++|+|+ +++|++
T Consensus 17 ~~~~fsp~~--------~~l~s~~~d------g~v~lWd~~~~~~~~~~~~~~~~v--~~~~~~~~--------~~~l~s 72 (304)
T 2ynn_A 17 KGIDFHPTE--------PWVLTTLYS------GRVELWNYETQVEVRSIQVTETPV--RAGKFIAR--------KNWIIV 72 (304)
T ss_dssp EEEEECSSS--------SEEEEEETT------SEEEEEETTTTEEEEEEECCSSCE--EEEEEEGG--------GTEEEE
T ss_pred EEEEECCCC--------CEEEEEcCC------CcEEEEECCCCceeEEeeccCCcE--EEEEEeCC--------CCEEEE
Confidence 455566654 566777765 799999999999999999999876 46699998 679999
Q ss_pred EeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccc
Q 047036 381 GLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAF 459 (634)
Q Consensus 381 GS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L 459 (634)
|+.|++|++||++++.+ +..+.+|... +.+++++|++ +||+||.||+|||||+.+.......+
T Consensus 73 ~s~d~~i~vwd~~~~~~-~~~~~~h~~~---------------v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 136 (304)
T 2ynn_A 73 GSDDFRIRVFNYNTGEK-VVDFEAHPDY---------------IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (304)
T ss_dssp EETTSEEEEEETTTCCE-EEEEECCSSC---------------EEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE
T ss_pred ECCCCEEEEEECCCCcE-EEEEeCCCCc---------------EEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh
Confidence 99999999999998764 5677766543 5789999998 89999999999999987754455678
Q ss_pred cCCCCCeEEEEECC-CCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccc
Q 047036 460 PGLGSPITHVDVTY-DGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGG 537 (634)
Q Consensus 460 ~GH~d~ItsVdfSp-DGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a 537 (634)
.+|..+|++|+|+| ++.+|++ +.|++|+|||+. .+.....+..+ +... ...+.|.|.
T Consensus 137 ~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~----~~~~~~~~~~~----------------~~~~-v~~~~~~~~ 195 (304)
T 2ynn_A 137 EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG----QSTPNFTLTTG----------------QERG-VNYVDYYPL 195 (304)
T ss_dssp CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT----CSSCSEEEECC----------------CTTC-EEEEEECCS
T ss_pred cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC----CCCccceeccC----------------CcCc-EEEEEEEEc
Confidence 99999999999999 7899999 999999999975 23222222211 1000 011233322
Q ss_pred cccccccCCCCceEEEEEcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 538 HFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 538 ~Fs~~t~~g~~E~~IvtStg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
......++++.|+.|.+||+.. ++. ...+..|...|..+.|
T Consensus 196 --------~~~~~l~s~s~D~~i~iWd~~~---~~~-------------~~~~~~h~~~v~~~~~ 236 (304)
T 2ynn_A 196 --------PDKPYMITASDDLTIKIWDYQT---KSC-------------VATLEGHMSNVSFAVF 236 (304)
T ss_dssp --------TTCCEEEEEETTSEEEEEETTT---TEE-------------EEEEECCSSCEEEEEE
T ss_pred --------CCCCEEEEEcCCCeEEEEeCCC---Ccc-------------ceeeCCCCCCEEEEEE
Confidence 1112344557899999999873 221 2567788888888887
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=1.6e-26 Score=238.96 Aligned_cols=190 Identities=16% Similarity=0.241 Sum_probs=147.7
Q ss_pred EEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEE
Q 047036 312 LMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWD 391 (634)
Q Consensus 312 L~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD 391 (634)
.+..+...|++++.| ++|++||+++|+++.+|.+|...| ..++|+|+.. +..+++|+.|++|++||
T Consensus 161 ~~~~~~~~l~t~s~D------~~v~lwd~~~~~~~~~~~~h~~~v--~~~~~~~~~~------g~~l~sgs~Dg~v~~wd 226 (354)
T 2pbi_B 161 SFTNSDMQILTASGD------GTCALWDVESGQLLQSFHGHGADV--LCLDLAPSET------GNTFVSGGCDKKAMVWD 226 (354)
T ss_dssp EECSSSSEEEEEETT------SEEEEEETTTCCEEEEEECCSSCE--EEEEECCCSS------CCEEEEEETTSCEEEEE
T ss_pred EEeCCCCEEEEEeCC------CcEEEEeCCCCeEEEEEcCCCCCe--EEEEEEeCCC------CCEEEEEeCCCeEEEEE
Confidence 344556677777765 799999999999999999999876 4568888521 57999999999999999
Q ss_pred cCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccccccccc--CCCCCeEE
Q 047036 392 MRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFP--GLGSPITH 468 (634)
Q Consensus 392 ~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~--GH~d~Its 468 (634)
++++.+ ++.+.+|.. .+.+++++|+| +||+||.||+|||||+.+.+ ....+. .+...|++
T Consensus 227 ~~~~~~-~~~~~~h~~---------------~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~-~~~~~~~~~~~~~~~~ 289 (354)
T 2pbi_B 227 MRSGQC-VQAFETHES---------------DVNSVRYYPSGDAFASGSDDATCRLYDLRADR-EVAIYSKESIIFGASS 289 (354)
T ss_dssp TTTCCE-EEEECCCSS---------------CEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCTTCCSCEEE
T ss_pred CCCCcE-EEEecCCCC---------------CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-EEEEEcCCCcccceeE
Confidence 998764 577765544 36789999998 89999999999999987653 333343 34468999
Q ss_pred EEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCC
Q 047036 469 VDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGK 547 (634)
Q Consensus 469 VdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~ 547 (634)
++|+|+|++|++ +.|++|+|||+. +|+.+..+.+|.+.. ..+.|+|. |
T Consensus 290 ~~~s~~g~~l~~g~~d~~i~vwd~~----~~~~~~~l~~h~~~v------------------~~l~~spd--------g- 338 (354)
T 2pbi_B 290 VDFSLSGRLLFAGYNDYTINVWDVL----KGSRVSILFGHENRV------------------STLRVSPD--------G- 338 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT----TCSEEEEECCCSSCE------------------EEEEECTT--------S-
T ss_pred EEEeCCCCEEEEEECCCcEEEEECC----CCceEEEEECCCCcE------------------EEEEECCC--------C-
Confidence 999999999999 889999999985 677777777776411 12455544 3
Q ss_pred CceEEEEEcCCeEEEEe
Q 047036 548 QERHLVATVGKFSVIWD 564 (634)
Q Consensus 548 ~E~~IvtStg~~viiWd 564 (634)
...+++|.|+.|.||+
T Consensus 339 -~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 339 -TAFCSGSWDHTLRVWA 354 (354)
T ss_dssp -SCEEEEETTSEEEEEC
T ss_pred -CEEEEEcCCCCEEecC
Confidence 2344557899999996
No 10
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=1.4e-26 Score=241.82 Aligned_cols=263 Identities=16% Similarity=0.202 Sum_probs=180.9
Q ss_pred CcEEEeee-CCCeEEEec--CeeeEEEccCCceecceeEEEecCCCCC--cc---------cccCcceeeEEeCCcceEE
Q 047036 256 VQSLTLGA-LDNSFLVSD--LGLQVYRNYNRGIHNKGVSVRFDGGSSK--IG---------SNSTPKKALLMRGETNMML 321 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G--~~igV~k~~~~gl~~~~~~~~~~~~~~~--~g---------~~fsP~~~mL~~~D~~mll 321 (634)
..+.++.+ +|+.+++.| .++.||....+.+ ...+..+... .. ..-.+...+.++.++++|+
T Consensus 65 ~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSL-----VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp SCCCEEEECTTSSEEEEECBSCEEEEETTTCCE-----EEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CEEEEEEECCCCCEEEEEcCCcEEEEEecCCCE-----EEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 34667788 899888876 5888998755431 2233322100 00 0000133455666777788
Q ss_pred ecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEe
Q 047036 322 MSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQN 401 (634)
Q Consensus 322 sss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~ 401 (634)
+++.| ++|++||+++++++..+.+|...| ..++|+|+ +..|++|+.|++|++||++++.+ +..
T Consensus 140 s~~~d------~~i~iwd~~~~~~~~~~~~h~~~v--~~~~~~p~--------~~~l~s~s~d~~v~iwd~~~~~~-~~~ 202 (393)
T 1erj_A 140 TGAED------RLIRIWDIENRKIVMILQGHEQDI--YSLDYFPS--------GDKLVSGSGDRTVRIWDLRTGQC-SLT 202 (393)
T ss_dssp EEETT------SCEEEEETTTTEEEEEECCCSSCE--EEEEECTT--------SSEEEEEETTSEEEEEETTTTEE-EEE
T ss_pred EEcCC------CeEEEEECCCCcEEEEEccCCCCE--EEEEEcCC--------CCEEEEecCCCcEEEEECCCCee-EEE
Confidence 88775 799999999999999999999986 46699998 67999999999999999998654 334
Q ss_pred cccCCCCccccccccccccCcceEEEEECC-CC-eEEEEECCCcEEEEeccccccccccc-------cCCCCCeEEEEEC
Q 047036 402 MVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DG-SIVVGSLDGKIRLYSKTSMRQAKTAF-------PGLGSPITHVDVT 472 (634)
Q Consensus 402 l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG-~IASGS~DGtIRLWD~~t~r~akt~L-------~GH~d~ItsVdfS 472 (634)
+. ....+.+++++| +| +||+|+.||+|||||+.+++ ....+ .+|..+|++|+|+
T Consensus 203 ~~----------------~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~-~~~~~~~~~~~~~~h~~~v~~v~~~ 265 (393)
T 1erj_A 203 LS----------------IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF-LVERLDSENESGTGHKDSVYSVVFT 265 (393)
T ss_dssp EE----------------CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC-EEEEEC------CCCSSCEEEEEEC
T ss_pred EE----------------cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc-EEEeecccccCCCCCCCCEEEEEEC
Confidence 32 122367888888 77 79999999999999988753 33333 6899999999999
Q ss_pred CCCCEEEE-EcCCcEEEEEcccccC--------CCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccc
Q 047036 473 YDGKWILG-TTDTYLILICTLFSDK--------DGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVT 543 (634)
Q Consensus 473 pDGk~LlS-S~D~tIrLWD~~~~~~--------~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t 543 (634)
|||++|++ +.|++|+|||+..... .+.+...|.+|.. . ...+.|++.
T Consensus 266 ~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------------~-v~~~~~~~~------ 321 (393)
T 1erj_A 266 RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD-----------------F-VLSVATTQN------ 321 (393)
T ss_dssp TTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSS-----------------C-EEEEEECGG------
T ss_pred CCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccC-----------------c-EEEEEECCC------
Confidence 99999999 8999999999862110 0122222222221 0 012333333
Q ss_pred cCCCCceEEEE-EcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 544 ENGKQERHLVA-TVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 544 ~~g~~E~~Ivt-Stg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
+ .+|++ +.|+.|++||++. ++. ...+..|...|..+.|
T Consensus 322 --~---~~l~sgs~D~~v~iwd~~~---~~~-------------~~~l~~h~~~v~~v~~ 360 (393)
T 1erj_A 322 --D---EYILSGSKDRGVLFWDKKS---GNP-------------LLMLQGHRNSVISVAV 360 (393)
T ss_dssp --G---CEEEEEETTSEEEEEETTT---CCE-------------EEEEECCSSCEEEEEE
T ss_pred --C---CEEEEEeCCCeEEEEECCC---CeE-------------EEEECCCCCCEEEEEe
Confidence 2 35554 7899999999863 322 2467889999998888
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=4.5e-27 Score=247.75 Aligned_cols=233 Identities=12% Similarity=0.175 Sum_probs=175.2
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQA 332 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~ 332 (634)
.+.++.+ +++.+++.| .+|.||...... .+..+.+|. .+...+.+.+++++|++++.|
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~-----~~~~~~~h~-------~~V~~v~~~p~~~~l~s~s~D------ 213 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHD-------HNVSSVSIMPNGDHIVSASRD------ 213 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSC-----EEECCCCCS-------SCEEEEEECSSSSEEEEEETT------
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-----eeEEEcCCC-------CCEEEEEEeCCCCEEEEEeCC------
Confidence 4667777 777777765 578899864432 233344552 123333444455677787775
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
++|++||+.+|+++.+|.+|...| ..++|+|+ +.++++|+.|++|++||++++.+ +..+.+|...
T Consensus 214 ~~i~~wd~~~~~~~~~~~~h~~~v--~~~~~~~~--------g~~l~s~s~D~~v~vwd~~~~~~-~~~~~~h~~~---- 278 (410)
T 1vyh_C 214 KTIKMWEVQTGYCVKTFTGHREWV--RMVRPNQD--------GTLIASCSNDQTVRVWVVATKEC-KAELREHRHV---- 278 (410)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCE--EEEEECTT--------SSEEEEEETTSCEEEEETTTCCE-EEEECCCSSC----
T ss_pred CeEEEEECCCCcEEEEEeCCCccE--EEEEECCC--------CCEEEEEcCCCeEEEEECCCCce-eeEecCCCce----
Confidence 799999999999999999999986 46699998 67999999999999999998754 5667665543
Q ss_pred ccccccccCcceEEEEECCC--------------------C-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEE
Q 047036 413 TQGHQFSRGTNFQCFASTGD--------------------G-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDV 471 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~d--------------------G-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdf 471 (634)
+.|++++|+ | +||+||.||+|||||+.+++ +...+.+|..+|++|+|
T Consensus 279 -----------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~-~~~~~~~h~~~v~~v~~ 346 (410)
T 1vyh_C 279 -----------VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLF 346 (410)
T ss_dssp -----------EEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE-EEEEEECCSSCEEEEEE
T ss_pred -----------EEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc-eEEEEECCCCcEEEEEE
Confidence 467777764 4 79999999999999998874 77788999999999999
Q ss_pred CCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCce
Q 047036 472 TYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQER 550 (634)
Q Consensus 472 SpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~ 550 (634)
+|+|++|++ +.|++|+|||+. .++++..|.+|.+.. ..+.|+|. + ..
T Consensus 347 ~~~g~~l~s~s~D~~i~vwd~~----~~~~~~~~~~h~~~v------------------~~l~~~~~--------~--~~ 394 (410)
T 1vyh_C 347 HSGGKFILSCADDKTLRVWDYK----NKRCMKTLNAHEHFV------------------TSLDFHKT--------A--PY 394 (410)
T ss_dssp CSSSSCEEEEETTTEEEEECCT----TSCCCEEEECCSSCE------------------EEEEECSS--------S--SC
T ss_pred cCCCCEEEEEeCCCeEEEEECC----CCceEEEEcCCCCcE------------------EEEEEcCC--------C--CE
Confidence 999999999 899999999985 577777777775311 13445544 2 23
Q ss_pred EEEEEcCCeEEEEeCh
Q 047036 551 HLVATVGKFSVIWDFQ 566 (634)
Q Consensus 551 ~IvtStg~~viiWdl~ 566 (634)
.+++|.|+.|.+|++.
T Consensus 395 l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 395 VVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEEETTSEEEEEC--
T ss_pred EEEEeCCCcEEEEeCC
Confidence 4455789999999863
No 12
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=9.3e-27 Score=237.95 Aligned_cols=231 Identities=13% Similarity=0.126 Sum_probs=176.4
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
.+.++.+ +++.+++.| ..|.+|....+. ....+..+. .....+| ++++++|++++.+
T Consensus 82 ~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~-----~~~~~~~~~~~~~~~~~--------spdg~~l~~g~~d----- 143 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSSLDAHIRLWDLENGK-----QIKSIDAGPVDAWTLAF--------SPDSQYLATGTHV----- 143 (321)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTE-----EEEEEECCTTCCCCEEE--------CTTSSEEEEECTT-----
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCC-----EEEEEeCCCccEEEEEE--------CCCCCEEEEEcCC-----
Confidence 3566666 677777764 578888865432 222333331 1233444 4455667777665
Q ss_pred CCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 332 APGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
++|++||+++|+.+..+.+|...| ..++|+|+ +.+|++|+.|++|++||+++++ +++.+.+|..+
T Consensus 144 -g~v~i~~~~~~~~~~~~~~~~~~v--~~~~~spd--------g~~lasg~~dg~i~iwd~~~~~-~~~~~~~h~~~--- 208 (321)
T 3ow8_A 144 -GKVNIFGVESGKKEYSLDTRGKFI--LSIAYSPD--------GKYLASGAIDGIINIFDIATGK-LLHTLEGHAMP--- 208 (321)
T ss_dssp -SEEEEEETTTCSEEEEEECSSSCE--EEEEECTT--------SSEEEEEETTSCEEEEETTTTE-EEEEECCCSSC---
T ss_pred -CcEEEEEcCCCceeEEecCCCceE--EEEEECCC--------CCEEEEEcCCCeEEEEECCCCc-EEEEEcccCCc---
Confidence 799999999999999999998875 45699998 6799999999999999999864 46777766543
Q ss_pred cccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEE
Q 047036 412 WTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILI 489 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLW 489 (634)
+.+++++|+| +||+||.||+|||||+.+++ ....+.+|..+|++|+|+|||++|++ +.|++|+||
T Consensus 209 ------------v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~-~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iw 275 (321)
T 3ow8_A 209 ------------IRSLTFSPDSQLLVTASDDGYIKIYDVQHAN-LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 275 (321)
T ss_dssp ------------CCEEEECTTSCEEEEECTTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ------------eeEEEEcCCCCEEEEEcCCCeEEEEECCCcc-eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 4688999998 79999999999999998763 67789999999999999999999999 999999999
Q ss_pred EcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeC
Q 047036 490 CTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDF 565 (634)
Q Consensus 490 D~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl 565 (634)
|+. +++++..|.+|.+.. ..+.|+|. | ...++++.|+.|.+||+
T Consensus 276 d~~----~~~~~~~~~~h~~~v------------------~~v~~s~~--------g--~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 276 DVG----TRTCVHTFFDHQDQV------------------WGVKYNGN--------G--SKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp ETT----TTEEEEEECCCSSCE------------------EEEEECTT--------S--SEEEEEETTCCEEEEEC
T ss_pred eCC----CCEEEEEEcCCCCcE------------------EEEEECCC--------C--CEEEEEeCCCeEEEEeC
Confidence 986 688888888776411 12445443 3 23445578999999996
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=6.1e-26 Score=232.07 Aligned_cols=257 Identities=13% Similarity=0.106 Sum_probs=185.9
Q ss_pred CcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCC
Q 047036 256 VQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKP 330 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~ 330 (634)
..+.++.+ +|+.+++.| .+|.||...... ....+..|. .+..++|+ +++++|++++.|
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~-----~~~~~~~~~~~v~~~~~s--------~~~~~l~s~~~d---- 118 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN-----KVHAIPLRSSWVMTCAYA--------PSGNYVACGGLD---- 118 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCC-----EEEEEECSSSCEEEEEEC--------TTSSEEEEEETT----
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCC-----cceEeecCCccEEEEEEC--------CCCCEEEEEeCC----
Confidence 45778888 788888865 588999865433 223343331 12334444 455677777765
Q ss_pred CCCcEEEEeCCCC----cEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCC
Q 047036 331 QAPGVQQLDIETG----KIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGD 406 (634)
Q Consensus 331 ~~~TIrlWDleTG----K~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~ 406 (634)
++|++||+.++ ++.+.+.+|...| ..+.|+|+ ..+++|+.|++|++||++++. .+..+.+|.
T Consensus 119 --~~v~iw~~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~---------~~l~s~s~d~~i~~wd~~~~~-~~~~~~~h~ 184 (340)
T 1got_B 119 --NICSIYNLKTREGNVRVSRELAGHTGYL--SCCRFLDD---------NQIVTSSGDTTCALWDIETGQ-QTTTFTGHT 184 (340)
T ss_dssp --CEEEEEETTTCSBSCEEEEEEECCSSCE--EEEEEEET---------TEEEEEETTSCEEEEETTTTE-EEEEECCCS
T ss_pred --CeEEEEECccCCCcceeEEEecCCCccE--EEEEECCC---------CcEEEEECCCcEEEEECCCCc-EEEEEcCCC
Confidence 79999999876 5778899999976 45689886 469999999999999999865 456776665
Q ss_pred CCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCC
Q 047036 407 SPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDT 484 (634)
Q Consensus 407 s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~ 484 (634)
.. +.+++++|+| +||+|+.||+|||||+.+++ ....+.+|..+|++|+|+|+|++|++ +.|+
T Consensus 185 ~~---------------v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~ 248 (340)
T 1got_B 185 GD---------------VMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNGNAFATGSDDA 248 (340)
T ss_dssp SC---------------EEEEEECTTSSEEEEEETTSCEEEEETTTCS-EEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred Cc---------------eEEEEECCCCCEEEEEeCCCcEEEEECCCCe-eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCC
Confidence 43 5789999998 79999999999999998763 67789999999999999999999999 9999
Q ss_pred cEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEe
Q 047036 485 YLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWD 564 (634)
Q Consensus 485 tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWd 564 (634)
+|+|||++ .++.+..|..+. +. .....+.|+|. | ...++++.|+.|.+||
T Consensus 249 ~v~iwd~~----~~~~~~~~~~~~---------------~~-~~v~~~~~s~~--------g--~~l~~g~~d~~i~vwd 298 (340)
T 1got_B 249 TCRLFDLR----ADQELMTYSHDN---------------II-CGITSVSFSKS--------G--RLLLAGYDDFNCNVWD 298 (340)
T ss_dssp CEEEEETT----TTEEEEEECCTT---------------CC-SCEEEEEECTT--------S--SEEEEEETTSEEEEEE
T ss_pred cEEEEECC----CCcEEEEEccCC---------------cc-cceEEEEECCC--------C--CEEEEECCCCeEEEEE
Confidence 99999986 344444333110 00 00012344443 3 2344557899999999
Q ss_pred ChhhhcccccccccccCCcceeeEEEeccCCCeeeeccccC
Q 047036 565 FQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHD 605 (634)
Q Consensus 565 l~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~~d 605 (634)
+.. +.. ...+..|...|..+.|-.+
T Consensus 299 ~~~---~~~-------------~~~~~~h~~~v~~~~~s~d 323 (340)
T 1got_B 299 ALK---ADR-------------AGVLAGHDNRVSCLGVTDD 323 (340)
T ss_dssp TTT---CCE-------------EEEEECCSSCEEEEEECTT
T ss_pred ccc---CcE-------------eeEeecCCCcEEEEEEcCC
Confidence 863 221 2467889999998888433
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=9.3e-27 Score=242.11 Aligned_cols=242 Identities=16% Similarity=0.174 Sum_probs=172.1
Q ss_pred CcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCC-CCCcccccCcceeeEEeC---------------
Q 047036 256 VQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGG-SSKIGSNSTPKKALLMRG--------------- 315 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~-~~~~g~~fsP~~~mL~~~--------------- 315 (634)
..+.++.+ +|+.+++.| .+|.||...... ....+..| .++..++|+|++.+++.+
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~-----~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ-----KTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTE-----EEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCS
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----cceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCc
Confidence 45778888 788888875 478888864432 12234444 234566677665544321
Q ss_pred ---------------------------CcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEE-----eccCCCcceeEEEE
Q 047036 316 ---------------------------ETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEW-----KFEKDGTDITMRDI 363 (634)
Q Consensus 316 ---------------------------D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~l-----kgH~~~V~I~vvsf 363 (634)
+..+|++++.| ++|++||+.+|+++..+ .+|...| ..++|
T Consensus 142 ~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v--~~~~~ 213 (380)
T 3iz6_a 142 DRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGD------QTCVLWDVTTGQRISIFGSEFPSGHTADV--LSLSI 213 (380)
T ss_dssp SCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTT------SCEEEECTTTCCEEEEECCCSSSSCCSCE--EEEEE
T ss_pred cccCCccceeeccCCCcceEEEEEecCCCCEEEEECCC------CcEEEEEcCCCcEEEEeecccCCCCccCe--EEEEe
Confidence 13356666654 79999999999999998 7898876 34577
Q ss_pred ecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCC
Q 047036 364 TNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDG 442 (634)
Q Consensus 364 sPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DG 442 (634)
+|.. +.++++|+.|++|++||+|.....++.+.+|... +.+++++|+| +||+||.||
T Consensus 214 ~~~~-------~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~---------------v~~v~~~p~~~~l~s~s~D~ 271 (380)
T 3iz6_a 214 NSLN-------ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGD---------------INSVKFFPDGQRFGTGSDDG 271 (380)
T ss_dssp CSSS-------CCEEEEEETTSCEEEEETTTTCCCCEEECCCSSC---------------CCEEEECTTSSEEEEECSSS
T ss_pred ecCC-------CCEEEEEECCCeEEEEECCCCCcceEEECCcCCC---------------eEEEEEecCCCeEEEEcCCC
Confidence 7631 5799999999999999999655556777776654 4688999998 899999999
Q ss_pred cEEEEeccccccccccccCC-------CCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeee----cCCCCC
Q 047036 443 KIRLYSKTSMRQAKTAFPGL-------GSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGF----SGRMGN 510 (634)
Q Consensus 443 tIRLWD~~t~r~akt~L~GH-------~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF----~gh~~~ 510 (634)
+|||||+.+++ ....+..| ...|++|+|||+|++|++ +.|++|+|||+. .++.+..+ .+|.+.
T Consensus 272 ~i~lwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~----~~~~~~~~~~~~~~h~~~ 346 (380)
T 3iz6_a 272 TCRLFDMRTGH-QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL----LAEMVLNLGTLQNSHEGR 346 (380)
T ss_dssp CEEEEETTTTE-EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT----TCCEEEEECCSCSSCCCC
T ss_pred eEEEEECCCCc-EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC----CCceEEEEecccCCCCCc
Confidence 99999998764 44444333 335999999999999999 889999999975 45554444 223210
Q ss_pred CCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEE-EcCCeEEEEeCh
Q 047036 511 KIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVA-TVGKFSVIWDFQ 566 (634)
Q Consensus 511 ~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~ 566 (634)
...+.|+|. | ..|++ |.|+.|.||++.
T Consensus 347 ------------------v~~l~~s~d--------g---~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 347 ------------------ISCLGLSSD--------G---SALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp ------------------CCEEEECSS--------S---SEEEEECTTSCEEEEECC
T ss_pred ------------------eEEEEECCC--------C---CEEEEeeCCCCEEEEecC
Confidence 123445444 3 45555 679999999986
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.95 E-value=4.1e-26 Score=252.82 Aligned_cols=216 Identities=10% Similarity=0.053 Sum_probs=155.3
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCC-CCCcccccCcceeeEE------------------
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGG-SSKIGSNSTPKKALLM------------------ 313 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~-~~~~g~~fsP~~~mL~------------------ 313 (634)
.+.++++ +|+.+++.| .+|.||........ ....+.+| .++.+++|+|++..|+
T Consensus 61 ~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~---~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~ 137 (611)
T 1nr0_A 61 QTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI---LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG 137 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC---EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC
T ss_pred ceEEEEECCCCcEEEEEeCCCCEEEeECCCCcce---eeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC
Confidence 4777888 888888876 47888886432210 11233333 2335566666654443
Q ss_pred ------------------eCCcc-eEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCC
Q 047036 314 ------------------RGETN-MMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDP 374 (634)
Q Consensus 314 ------------------~~D~~-mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~ 374 (634)
++++. +|++++.| ++|++||+.+++++.++.+|...| ..++|+|+
T Consensus 138 ~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D------~~v~lwd~~~~~~~~~l~~H~~~V--~~v~fspd-------- 201 (611)
T 1nr0_A 138 TSNGNLTGQARAMNSVDFKPSRPFRIISGSDD------NTVAIFEGPPFKFKSTFGEHTKFV--HSVRYNPD-------- 201 (611)
T ss_dssp CBCBCCCCCSSCEEEEEECSSSSCEEEEEETT------SCEEEEETTTBEEEEEECCCSSCE--EEEEECTT--------
T ss_pred CCcceecCCCCCceEEEECCCCCeEEEEEeCC------CeEEEEECCCCeEeeeeccccCce--EEEEECCC--------
Confidence 23333 46666654 799999999999999999999987 46699999
Q ss_pred CCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccc
Q 047036 375 SESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMR 453 (634)
Q Consensus 375 g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r 453 (634)
+.+|++|+.|++|++||++++.+ +..+.... + ...+ +...+.+++|+|+| +||+||.|++|||||+.+++
T Consensus 202 g~~las~s~D~~i~lwd~~~g~~-~~~~~~~~--~--~~~~----h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 202 GSLFASTGGDGTIVLYNGVDGTK-TGVFEDDS--L--KNVA----HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCCE-EEECBCTT--S--SSCS----SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred CCEEEEEECCCcEEEEECCCCcE-eeeecccc--c--cccc----cCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 67999999999999999988654 45552100 0 0001 22346899999999 79999999999999987643
Q ss_pred cc------------------------------------------cccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEE
Q 047036 454 QA------------------------------------------KTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILIC 490 (634)
Q Consensus 454 ~a------------------------------------------kt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD 490 (634)
.. ...+.||..+|++|+|||||++|++ +.|++|+|||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 273 VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 11 1235689999999999999999999 9999999999
Q ss_pred cccccCCCCeeeee
Q 047036 491 TLFSDKDGKTKTGF 504 (634)
Q Consensus 491 ~~~~~~~G~~~~gF 504 (634)
+. .|++...+
T Consensus 353 ~~----~~~~~~~~ 362 (611)
T 1nr0_A 353 IS----TGISNRVF 362 (611)
T ss_dssp TT----TCCEEECS
T ss_pred CC----CCceeeec
Confidence 85 45544433
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=7e-27 Score=242.29 Aligned_cols=273 Identities=12% Similarity=0.089 Sum_probs=178.4
Q ss_pred CCcEEEeee-CCCeEEEecC---------eeeEEEccCCceecceeEEEecCC-CCCcccccCcceeeEEeCCcceEEec
Q 047036 255 GVQSLTLGA-LDNSFLVSDL---------GLQVYRNYNRGIHNKGVSVRFDGG-SSKIGSNSTPKKALLMRGETNMMLMS 323 (634)
Q Consensus 255 ~~~~LavG~-~D~sfvv~G~---------~igV~k~~~~gl~~~~~~~~~~~~-~~~~g~~fsP~~~mL~~~D~~mllss 323 (634)
...+.+|+| +|+++++.|+ .|.+|.......... ......+| ..+...+|+|+ +.+|+ +
T Consensus 42 ~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~-~~~~~~~~~~~V~~~~~s~d--------~~~l~-~ 111 (357)
T 4g56_B 42 EVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNES-LCTAGVQTEAGVTDVAWVSE--------KGILV-A 111 (357)
T ss_dssp CSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGG-GCSEEEECSSCEEEEEEETT--------TEEEE-E
T ss_pred cCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCccee-EecccCCCCCCEEEEEEcCC--------CCEEE-E
Confidence 445888999 9999999874 366666533221111 11111122 12244455554 44443 4
Q ss_pred CCCCCCCCCCcEEEEeCCCCcEEE----EEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceE
Q 047036 324 PLKDGKPQAPGVQQLDIETGKIVT----EWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIV 399 (634)
Q Consensus 324 s~d~~~~~~~TIrlWDleTGK~V~----~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~V 399 (634)
+.| ++|++||+.+|+.+. .+.+|...| ..++|+|+ +.+|++|+.|++|++||++++. ++
T Consensus 112 s~d------g~v~lWd~~~~~~~~~~~~~~~~h~~~V--~~v~~spd--------g~~l~sgs~dg~v~iwd~~~~~-~~ 174 (357)
T 4g56_B 112 SDS------GAVELWEILEKESLLVNKFAKYEHDDIV--KTLSVFSD--------GTQAVSGGKDFSVKVWDLSQKA-VL 174 (357)
T ss_dssp ETT------SCEEEC--------CCCCEEECCCSSCE--EEEEECSS--------SSEEEEEETTSCEEEEETTTTE-EE
T ss_pred ECC------CEEEEeeccccceeEEEeeccCCCCCCE--EEEEECCC--------CCEEEEEeCCCeEEEEECCCCc-EE
Confidence 443 689999999998654 345899876 46699998 6799999999999999999864 46
Q ss_pred EecccCCCCccccccccccccCcceEEEEECCCC--eEEEEECCCcEEEEeccccccccc--cccCCCCCeEEEEECCCC
Q 047036 400 QNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG--SIVVGSLDGKIRLYSKTSMRQAKT--AFPGLGSPITHVDVTYDG 475 (634)
Q Consensus 400 q~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG--~IASGS~DGtIRLWD~~t~r~akt--~L~GH~d~ItsVdfSpDG 475 (634)
..+.+|... +.++++++++ .|++|+.||+|||||+.+++ ... .+..|..+|++|+|+|++
T Consensus 175 ~~~~~h~~~---------------v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~-~~~~~~~~~~~~~v~~v~~sp~~ 238 (357)
T 4g56_B 175 KSYNAHSSE---------------VNCVAACPGKDTIFLSCGEDGRILLWDTRKPK-PATRIDFCASDTIPTSVTWHPEK 238 (357)
T ss_dssp EEECCCSSC---------------EEEEEECTTCSSCEEEEETTSCEEECCTTSSS-CBCBCCCTTCCSCEEEEEECTTS
T ss_pred EEEcCCCCC---------------EEEEEEccCCCceeeeeccCCceEEEECCCCc-eeeeeeeccccccccchhhhhcc
Confidence 777666543 5788998876 68999999999999998764 333 345678899999999985
Q ss_pred -CEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEE
Q 047036 476 -KWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLV 553 (634)
Q Consensus 476 -k~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~Iv 553 (634)
.+|++ +.|++|+|||++ +++++..|.+|.... ..+.|+|. + .++|+
T Consensus 239 ~~~la~g~~d~~i~~wd~~----~~~~~~~~~~~~~~v------------------~~l~~sp~--------~--~~~la 286 (357)
T 4g56_B 239 DDTFACGDETGNVSLVNIK----NPDSAQTSAVHSQNI------------------TGLAYSYH--------S--SPFLA 286 (357)
T ss_dssp TTEEEEEESSSCEEEEESS----CGGGCEEECCCSSCE------------------EEEEECSS--------S--SCCEE
T ss_pred cceEEEeecccceeEEECC----CCcEeEEEeccceeE------------------EEEEEcCC--------C--CCEEE
Confidence 57777 889999999986 566777777665311 12445443 2 24565
Q ss_pred E-EcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeecccc-Cc-cccCCCCCCCEEE
Q 047036 554 A-TVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMH-DK-FAVTDSPEAPLVV 619 (634)
Q Consensus 554 t-Stg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~~-d~-f~~~~~~~~~iiv 619 (634)
+ |.|+.|.|||++. ++ ++....|...|.++.|-. |. +-++++.|..|+|
T Consensus 287 sgs~D~~i~iwd~~~---~~--------------~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~i 338 (357)
T 4g56_B 287 SISEDCTVAVLDADF---SE--------------VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLH 338 (357)
T ss_dssp EEETTSCEEEECTTS---CE--------------EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred EEeCCCEEEEEECCC---Cc--------------EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEE
Confidence 5 7799999999862 32 245667899999999831 22 2233344566655
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=6.3e-26 Score=232.85 Aligned_cols=281 Identities=10% Similarity=0.065 Sum_probs=183.7
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
.+.++++ +|+.+++.| .+|.||....+.... ......+|. .+.+.+|+| ++++|++++.|
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~--~~~~~~~h~~~v~~~~~sp--------~g~~l~s~s~D----- 82 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWIC--KSVLSEGHQRTVRKVAWSP--------CGNYLASASFD----- 82 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEE--EEEECSSCSSCEEEEEECT--------TSSEEEEEETT-----
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCccee--eeeeccccCCcEEEEEECC--------CCCEEEEEECC-----
Confidence 4677888 888888865 579999865442110 111123442 234455555 55677777765
Q ss_pred CCcEEEEeCCCC--cEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCc--eEEecccCCC
Q 047036 332 APGVQQLDIETG--KIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSG--IVQNMVKGDS 407 (634)
Q Consensus 332 ~~TIrlWDleTG--K~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~--~Vq~l~gh~s 407 (634)
++|++||+.++ +++.++.+|...| ..++|+|+ +.+|++|+.|++|++||++.+.. ++..+.+|..
T Consensus 83 -~~v~iw~~~~~~~~~~~~~~~h~~~v--~~v~~sp~--------~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~ 151 (345)
T 3fm0_A 83 -ATTCIWKKNQDDFECVTTLEGHENEV--KSVAWAPS--------GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ 151 (345)
T ss_dssp -SCEEEEEECCC-EEEEEEECCCSSCE--EEEEECTT--------SSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS
T ss_pred -CcEEEEEccCCCeEEEEEccCCCCCc--eEEEEeCC--------CCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC
Confidence 79999999887 5688999999986 46699998 67999999999999999987542 3455554443
Q ss_pred CccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccc-cccccccCCCCCeEEEEECCCCCEEEE-EcCC
Q 047036 408 PVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMR-QAKTAFPGLGSPITHVDVTYDGKWILG-TTDT 484 (634)
Q Consensus 408 ~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r-~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~ 484 (634)
.+.+++++|+| +||+||.||+|+|||..+.+ .+...+.+|..+|++|+|+|||++||+ +.|+
T Consensus 152 ---------------~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 152 ---------------DVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp ---------------CEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ---------------CeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 36789999998 79999999999999986542 134578999999999999999999999 9999
Q ss_pred cEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeec-CCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEE
Q 047036 485 YLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLT-PLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIW 563 (634)
Q Consensus 485 tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~-Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiW 563 (634)
+|+|||.... +. ...+... ...+..+++... ..|... ...+.|++. + ...++++.|+.|.+|
T Consensus 217 ~v~iW~~~~~---~~-~~~~~~~--~~~~~~~~~~~~~~~h~~~-v~~v~~~~~--------~--~~l~s~~~d~~i~vw 279 (345)
T 3fm0_A 217 TVRIWRQYLP---GN-EQGVACS--GSDPSWKCICTLSGFHSRT-IYDIAWCQL--------T--GALATACGDDAIRVF 279 (345)
T ss_dssp CEEEEEEECT---TC-TTCCCCC-----CEEEEEEEECSSCSSC-EEEEEECTT--------T--CCEEEEETTSCEEEE
T ss_pred eEEEeccccC---CC-Cccceee--ccCCccceeEEecCCCCCc-EEEEEEecC--------C--CEEEEEeCCCeEEEE
Confidence 9999997521 11 0001000 001212223221 112210 112444433 2 245566889999999
Q ss_pred eChhhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 564 DFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 564 dl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
++..-.......+ +........|...|..+.|
T Consensus 280 ~~~~~~~~~~~~~-------~~~~~~~~~h~~~V~~v~~ 311 (345)
T 3fm0_A 280 QEDPNSDPQQPTF-------SLTAHLHQAHSQDVNCVAW 311 (345)
T ss_dssp EECTTSCTTSCCE-------EEEEEETTSSSSCEEEEEE
T ss_pred EeCCCCCcceeeE-------EEEeeecccccCcEeEeEE
Confidence 9864221111100 1111223467889999998
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=6.5e-26 Score=231.86 Aligned_cols=233 Identities=17% Similarity=0.191 Sum_probs=168.5
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
.+.++.+ +++.+++.| ..|.+|......... .....+.+|. .+..+.|. +++. |++++.|
T Consensus 99 ~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~-~~~~~~~~h~~~v~~~~~~--------~~~~-l~s~s~d----- 163 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNV-RVSRELAGHTGYLSCCRFL--------DDNQ-IVTSSGD----- 163 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSC-EEEEEEECCSSCEEEEEEE--------ETTE-EEEEETT-----
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcc-eeEEEecCCCccEEEEEEC--------CCCc-EEEEECC-----
Confidence 3666777 777777754 477888764432111 1223345552 11233333 3333 5566554
Q ss_pred CCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 332 APGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
++|++||+++|+++.++.+|...| ..++|+|+ +.++++|+.|++|++||++.+.+ ++++.+|..
T Consensus 164 -~~i~~wd~~~~~~~~~~~~h~~~v--~~~~~~~~--------~~~l~sg~~d~~v~~wd~~~~~~-~~~~~~h~~---- 227 (340)
T 1got_B 164 -TTCALWDIETGQQTTTFTGHTGDV--MSLSLAPD--------TRLFVSGACDASAKLWDVREGMC-RQTFTGHES---- 227 (340)
T ss_dssp -SCEEEEETTTTEEEEEECCCSSCE--EEEEECTT--------SSEEEEEETTSCEEEEETTTCSE-EEEECCCSS----
T ss_pred -CcEEEEECCCCcEEEEEcCCCCce--EEEEECCC--------CCEEEEEeCCCcEEEEECCCCee-EEEEcCCcC----
Confidence 799999999999999999999986 45699998 67999999999999999998654 577766654
Q ss_pred cccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccc--cCCCCCeEEEEECCCCCEEEE-EcCCcEE
Q 047036 412 WTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAF--PGLGSPITHVDVTYDGKWILG-TTDTYLI 487 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L--~GH~d~ItsVdfSpDGk~LlS-S~D~tIr 487 (634)
.+.+++++|+| +||+||.||+|||||+.+.+ ....+ +++..+|++|+|+|||++|++ +.|++|+
T Consensus 228 -----------~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~ 295 (340)
T 1got_B 228 -----------DINAICFFPNGNAFATGSDDATCRLFDLRADQ-ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295 (340)
T ss_dssp -----------CEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred -----------CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc-EEEEEccCCcccceEEEEECCCCCEEEEECCCCeEE
Confidence 35789999998 79999999999999987653 33333 345568999999999999999 8999999
Q ss_pred EEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEe
Q 047036 488 LICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWD 564 (634)
Q Consensus 488 LWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWd 564 (634)
|||+. +++.+..|.+|.+.. ..+.|+|. | ...+.+|.|+.|.|||
T Consensus 296 vwd~~----~~~~~~~~~~h~~~v------------------~~~~~s~d--------g--~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 296 VWDAL----KADRAGVLAGHDNRV------------------SCLGVTDD--------G--MAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEETT----TCCEEEEEECCSSCE------------------EEEEECTT--------S--SCEEEEETTSCEEEEC
T ss_pred EEEcc----cCcEeeEeecCCCcE------------------EEEEEcCC--------C--CEEEEEcCCccEEecC
Confidence 99985 577777788776411 12445444 3 2344457899999997
No 19
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=9.4e-26 Score=233.83 Aligned_cols=240 Identities=8% Similarity=0.019 Sum_probs=167.6
Q ss_pred cEEEeee-CCCeEEEec--CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD--LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAP 333 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G--~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~ 333 (634)
.+.++++ +|+.+++.+ ..|.||....+.... .......+|. .+...+.+++++++|++++.| +
T Consensus 96 ~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~-~~~~~~~~h~-------~~V~~v~~spdg~~l~sgs~d------g 161 (357)
T 4g56_B 96 GVTDVAWVSEKGILVASDSGAVELWEILEKESLL-VNKFAKYEHD-------DIVKTLSVFSDGTQAVSGGKD------F 161 (357)
T ss_dssp CEEEEEEETTTEEEEEETTSCEEEC--------C-CCCEEECCCS-------SCEEEEEECSSSSEEEEEETT------S
T ss_pred CEEEEEEcCCCCEEEEECCCEEEEeeccccceeE-EEeeccCCCC-------CCEEEEEECCCCCEEEEEeCC------C
Confidence 4778888 888888865 589999865433111 0112223442 223344445556677777765 7
Q ss_pred cEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccc
Q 047036 334 GVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWT 413 (634)
Q Consensus 334 TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~ 413 (634)
+|++||+++|+++..|++|...| ..++|+|++ ...+++|+.|++|++||++++... ..+..+
T Consensus 162 ~v~iwd~~~~~~~~~~~~h~~~v--~~v~~s~~~-------~~~~~s~~~dg~v~~wd~~~~~~~-~~~~~~-------- 223 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAHSSEV--NCVAACPGK-------DTIFLSCGEDGRILLWDTRKPKPA-TRIDFC-------- 223 (357)
T ss_dssp CEEEEETTTTEEEEEECCCSSCE--EEEEECTTC-------SSCEEEEETTSCEEECCTTSSSCB-CBCCCT--------
T ss_pred eEEEEECCCCcEEEEEcCCCCCE--EEEEEccCC-------CceeeeeccCCceEEEECCCCcee-eeeeec--------
Confidence 99999999999999999999986 456999983 247999999999999999986542 222111
Q ss_pred cccccccCcceEEEEECCCC--eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCC-CEEEE-EcCCcEEEE
Q 047036 414 QGHQFSRGTNFQCFASTGDG--SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDG-KWILG-TTDTYLILI 489 (634)
Q Consensus 414 ~g~~y~~~~~fssva~s~dG--~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDG-k~LlS-S~D~tIrLW 489 (634)
.....+.+++++|++ +||+|+.|+.|+|||+.+++ ....+.+|..+|++|+|||+| ++||+ +.|++|+||
T Consensus 224 -----~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~-~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iw 297 (357)
T 4g56_B 224 -----ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD-SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVL 297 (357)
T ss_dssp -----TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG-GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred -----cccccccchhhhhcccceEEEeecccceeEEECCCCc-EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEE
Confidence 123357899999874 68999999999999998874 778899999999999999998 57888 889999999
Q ss_pred EcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEE-EcCCeEEEEeChh
Q 047036 490 CTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVA-TVGKFSVIWDFQQ 567 (634)
Q Consensus 490 D~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~~ 567 (634)
|+. .|+++. +.+|.+. ...+.|+|. . + ..|++ |.|+.|++|++..
T Consensus 298 d~~----~~~~~~-~~~H~~~------------------V~~vafsP~-----d--~---~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 298 DAD----FSEVFR-DLSHRDF------------------VTGVAWSPL-----D--H---SKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp CTT----SCEEEE-ECCCSSC------------------EEEEEECSS-----S--T---TEEEEEETTSCEEEEECC-
T ss_pred ECC----CCcEeE-ECCCCCC------------------EEEEEEeCC-----C--C---CEEEEEcCCCeEEEEECCC
Confidence 975 455443 3345421 023555553 1 2 35554 7899999999964
No 20
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.94 E-value=9.7e-25 Score=223.02 Aligned_cols=231 Identities=12% Similarity=0.166 Sum_probs=161.2
Q ss_pred CCeEEEec---CeeeEEEccCCcee--cceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEe
Q 047036 265 DNSFLVSD---LGLQVYRNYNRGIH--NKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLD 339 (634)
Q Consensus 265 D~sfvv~G---~~igV~k~~~~gl~--~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWD 339 (634)
|+.+++.| .+|.||........ .......+.+|. .+...+.+++++.+|++++.| ++|++||
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~-------~~V~~~~~~~~~~~l~s~s~D------~~v~lwd 104 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHN-------HFVSDLALSQENCFAISSSWD------KTLRLWD 104 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCS-------SCEEEEEECSSTTEEEEEETT------SEEEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCC-------CceEEEEECCCCCEEEEEcCC------CcEEEEE
Confidence 77777765 47889986443211 011223455652 223334445556677777765 7999999
Q ss_pred CCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccc
Q 047036 340 IETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFS 419 (634)
Q Consensus 340 leTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~ 419 (634)
+.+|++++++.+|...| ..++|+|+ +.+|++|+.|++|++||++.. +. ..+... .+
T Consensus 105 ~~~~~~~~~~~~h~~~v--~~v~~sp~--------~~~l~s~~~d~~i~~wd~~~~-~~-~~~~~~--------~~---- 160 (343)
T 2xzm_R 105 LRTGTTYKRFVGHQSEV--YSVAFSPD--------NRQILSAGAEREIKLWNILGE-CK-FSSAEK--------EN---- 160 (343)
T ss_dssp TTSSCEEEEEECCCSCE--EEEEECSS--------TTEEEEEETTSCEEEEESSSC-EE-EECCTT--------TS----
T ss_pred CCCCcEEEEEcCCCCcE--EEEEECCC--------CCEEEEEcCCCEEEEEeccCC-ce-eeeecc--------cC----
Confidence 99999999999999986 46699998 679999999999999999842 22 222100 01
Q ss_pred cCcceEEEEECCCC-----------eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEE
Q 047036 420 RGTNFQCFASTGDG-----------SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLI 487 (634)
Q Consensus 420 ~~~~fssva~s~dG-----------~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIr 487 (634)
+...+.|++++|++ +||+|+.||+|||||... +....+.+|..+|++|+|+|||++||+ +.|++|+
T Consensus 161 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 161 HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF--QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT--EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred CCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC--ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEE
Confidence 22346888998875 699999999999999543 356678899999999999999999999 8999999
Q ss_pred EEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChh
Q 047036 488 LICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQ 567 (634)
Q Consensus 488 LWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~ 567 (634)
|||+.. .+.....|. ..+.. ..+.|+|. + ++|+++.++.|.+||+..
T Consensus 239 iwd~~~---~~~~~~~~~----------------~~~~v---~~v~~sp~--------~---~~la~~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 239 IWDILN---LTYPQREFD----------------AGSTI---NQIAFNPK--------L---QWVAVGTDQGVKIFNLMT 285 (343)
T ss_dssp EEESSC---CSSCSEEEE----------------CSSCE---EEEEECSS--------S---CEEEEEESSCEEEEESSS
T ss_pred EEECCC---Ccccceeec----------------CCCcE---EEEEECCC--------C---CEEEEECCCCEEEEEeCC
Confidence 999741 121111111 01110 12444443 2 577788899999999863
No 21
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=4.5e-25 Score=230.47 Aligned_cols=245 Identities=17% Similarity=0.246 Sum_probs=173.5
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
...++.+ +|+.+++.| ..|.||...... ....+.+|. .+.+.+|+ +++++|++++.|
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~-----~~~~~~~h~~~v~~~~~~--------p~~~~l~s~s~d----- 186 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRK-----IVMILQGHEQDIYSLDYF--------PSGDKLVSGSGD----- 186 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTE-----EEEEECCCSSCEEEEEEC--------TTSSEEEEEETT-----
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-----EEEEEccCCCCEEEEEEc--------CCCCEEEEecCC-----
Confidence 4677888 888888865 588999865432 233455652 22344444 455667777765
Q ss_pred CCcEEEEeCCCCcEEEEEeccCCCcceeEEEEec-CCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcc
Q 047036 332 APGVQQLDIETGKIVTEWKFEKDGTDITMRDITN-DTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVL 410 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsP-d~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~ 410 (634)
++|++||+.+|+++.++..+. .| ..++|+| + +.++++|+.|++|++||++++.. +..+......
T Consensus 187 -~~v~iwd~~~~~~~~~~~~~~-~v--~~~~~~~~~--------~~~l~~~s~d~~v~iwd~~~~~~-~~~~~~~~~~-- 251 (393)
T 1erj_A 187 -RTVRIWDLRTGQCSLTLSIED-GV--TTVAVSPGD--------GKYIAAGSLDRAVRVWDSETGFL-VERLDSENES-- 251 (393)
T ss_dssp -SEEEEEETTTTEEEEEEECSS-CE--EEEEECSTT--------CCEEEEEETTSCEEEEETTTCCE-EEEEC-------
T ss_pred -CcEEEEECCCCeeEEEEEcCC-Cc--EEEEEECCC--------CCEEEEEcCCCcEEEEECCCCcE-EEeecccccC--
Confidence 799999999999999988654 33 4669998 5 67999999999999999998653 4444211000
Q ss_pred ccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccc-----------cccccccCCCCCeEEEEECCCCCEE
Q 047036 411 HWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMR-----------QAKTAFPGLGSPITHVDVTYDGKWI 478 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r-----------~akt~L~GH~d~ItsVdfSpDGk~L 478 (634)
..+ +...+.+++++++| +||+||.||+|||||+.+.+ .+...+.+|.+.|++|+|+|+|++|
T Consensus 252 --~~~----h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 325 (393)
T 1erj_A 252 --GTG----HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI 325 (393)
T ss_dssp ---CC----CSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEE
T ss_pred --CCC----CCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEE
Confidence 001 23357899999999 79999999999999986531 1334677999999999999999999
Q ss_pred EE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccc-cccccccCCCCceEEEE-E
Q 047036 479 LG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGG-HFSWVTENGKQERHLVA-T 555 (634)
Q Consensus 479 lS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a-~Fs~~t~~g~~E~~Ivt-S 555 (634)
++ +.|++|+|||+. +|+.+..+.+|.+.. . .+.|.++ .|++ +...|++ |
T Consensus 326 ~sgs~D~~v~iwd~~----~~~~~~~l~~h~~~v----~--------------~v~~~~~~~~~p------~~~~l~sgs 377 (393)
T 1erj_A 326 LSGSKDRGVLFWDKK----SGNPLLMLQGHRNSV----I--------------SVAVANGSSLGP------EYNVFATGS 377 (393)
T ss_dssp EEEETTSEEEEEETT----TCCEEEEEECCSSCE----E--------------EEEECSSCTTCT------TCEEEEEEE
T ss_pred EEEeCCCeEEEEECC----CCeEEEEECCCCCCE----E--------------EEEecCCcCcCC------CCCEEEEEC
Confidence 99 999999999986 688888888886421 1 2333332 2332 1245555 7
Q ss_pred cCCeEEEEeChhh
Q 047036 556 VGKFSVIWDFQQV 568 (634)
Q Consensus 556 tg~~viiWdl~~v 568 (634)
.|+.|.||++++.
T Consensus 378 ~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 378 GDCKARIWKYKKI 390 (393)
T ss_dssp TTSEEEEEEEEEC
T ss_pred CCCcEEECccccc
Confidence 7999999998753
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.5e-25 Score=223.11 Aligned_cols=192 Identities=8% Similarity=0.071 Sum_probs=137.9
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEe-cC-CC-CCcccccCcceeeEEeCCcceEEecCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRF-DG-GS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGK 329 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~-~~-~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~ 329 (634)
.+.++.+ ++ +++.| .+|.+|....+... ....+ .+ |. ++.+++|+| ++++|++++.|
T Consensus 16 ~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~---~~~~~~~~~h~~~v~~v~~sp--------~~~~las~s~D--- 79 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFT---LIDVLDETAHKKAIRSVAWRP--------HTSLLAAGSFD--- 79 (330)
T ss_dssp CEEEEEEETT--EEEEEESSSCEEEEECSSSCCE---EEEEECTTCCCSCEEEEEECT--------TSSEEEEEETT---
T ss_pred ceeeeccCCC--EEEEEcCCCEEEEEEecCCCeE---EEEEEecCCccCCEEEEEECC--------CCCEEEEEeCC---
Confidence 4566666 44 55543 57888886543211 11223 22 42 224445555 55667777765
Q ss_pred CCCCcEEEEeCC-------CCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCC---ceE
Q 047036 330 PQAPGVQQLDIE-------TGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRS---GIV 399 (634)
Q Consensus 330 ~~~~TIrlWDle-------TGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~---~~V 399 (634)
++|++||++ +++++..+.+|...| ..++|+|+ +.+|++|+.|++|++||++..+ .++
T Consensus 80 ---~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V--~~v~~sp~--------g~~las~s~D~~v~iwd~~~~~~~~~~~ 146 (330)
T 2hes_X 80 ---STVSIWAKEESADRTFEMDLLAIIEGHENEV--KGVAWSND--------GYYLATCSRDKSVWIWETDESGEEYECI 146 (330)
T ss_dssp ---SCEEEEEC-------CCCEEEEEEC----CE--EEEEECTT--------SCEEEEEETTSCEEEEECCTTCCCCEEE
T ss_pred ---CcEEEEEcccCcCccccceeEEEEcCCCCcE--EEEEECCC--------CCEEEEEeCCCEEEEEeccCCCCCeEEE
Confidence 799999985 356888999999986 46699998 6899999999999999996432 345
Q ss_pred EecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccc-cccccccCCCCCeEEEEECCC--C
Q 047036 400 QNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMR-QAKTAFPGLGSPITHVDVTYD--G 475 (634)
Q Consensus 400 q~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r-~akt~L~GH~d~ItsVdfSpD--G 475 (634)
..+.+|.. .+.+++++|++ +||+||.||+|||||..+.. .+...|.+|..+|++++|+|+ |
T Consensus 147 ~~~~~h~~---------------~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 211 (330)
T 2hes_X 147 SVLQEHSQ---------------DVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGV 211 (330)
T ss_dssp EEECCCSS---------------CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSS
T ss_pred EEeccCCC---------------ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCe
Confidence 56665544 36789999998 89999999999999976531 255688999999999999999 7
Q ss_pred CEEEE-EcCCcEEEEEcc
Q 047036 476 KWILG-TTDTYLILICTL 492 (634)
Q Consensus 476 k~LlS-S~D~tIrLWD~~ 492 (634)
.+|++ +.|++|+|||+.
T Consensus 212 ~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 212 FRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp CEEEEEETTSCEEEEEEE
T ss_pred eEEEEEeCCCeEEEEEec
Confidence 89999 899999999976
No 23
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=9.5e-25 Score=221.72 Aligned_cols=204 Identities=16% Similarity=0.199 Sum_probs=156.9
Q ss_pred cceEEecCCCCCCCCCCcEEEEeCCC-----CcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEE
Q 047036 317 TNMMLMSPLKDGKPQAPGVQQLDIET-----GKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWD 391 (634)
Q Consensus 317 ~~mllsss~d~~~~~~~TIrlWDleT-----GK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD 391 (634)
.++|++++.| ++|++||+.+ |..+++|++|...| ..++|+|+ +.++++|+.|++|++||
T Consensus 30 ~~~l~s~s~D------~~v~~W~~~~~~~~~~~~~~~~~~h~~~v--~~~~~s~d--------g~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 30 PNLLLSASRD------KTLISWKLTGDDQKFGVPVRSFKGHSHIV--QDCTLTAD--------GAYALSASWDKTLRLWD 93 (319)
T ss_dssp TTEEEEEETT------SEEEEEEEEEETTEEEEEEEEEECCSSCE--EEEEECTT--------SSEEEEEETTSEEEEEE
T ss_pred ccEEEEecCC------ccEEEecCCCCCccccccceEEeCCcccE--EEEEECCC--------CCEEEEEeCCCEEEEEE
Confidence 3677788775 7999999864 56789999999986 46699998 67999999999999999
Q ss_pred cCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEE
Q 047036 392 MRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVD 470 (634)
Q Consensus 392 ~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVd 470 (634)
++++. .++.+.+|... +.++++++++ +||+||.||+|||||+.+ .+...+.+|..+|.+|.
T Consensus 94 ~~~~~-~~~~~~~h~~~---------------v~~~~~~~~~~~l~s~s~D~~i~vwd~~~--~~~~~~~~h~~~v~~~~ 155 (319)
T 3frx_A 94 VATGE-TYQRFVGHKSD---------------VMSVDIDKKASMIISGSRDKTIKVWTIKG--QCLATLLGHNDWVSQVR 155 (319)
T ss_dssp TTTTE-EEEEEECCSSC---------------EEEEEECTTSCEEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEE
T ss_pred CCCCC-eeEEEccCCCc---------------EEEEEEcCCCCEEEEEeCCCeEEEEECCC--CeEEEEeccCCcEEEEE
Confidence 99865 46777766543 5788999998 799999999999999875 35677889999999999
Q ss_pred ECCC------CCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccc
Q 047036 471 VTYD------GKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVT 543 (634)
Q Consensus 471 fSpD------Gk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t 543 (634)
|+|+ +.+|++ +.|++|++||+. .++....|.+|.... ..+.|+|.
T Consensus 156 ~~~~~~~~~~~~~l~s~~~d~~i~~wd~~----~~~~~~~~~~h~~~v------------------~~~~~sp~------ 207 (319)
T 3frx_A 156 VVPNEKADDDSVTIISAGNDKMVKAWNLN----QFQIEADFIGHNSNI------------------NTLTASPD------ 207 (319)
T ss_dssp ECCC------CCEEEEEETTSCEEEEETT----TTEEEEEECCCCSCE------------------EEEEECTT------
T ss_pred EccCCCCCCCccEEEEEeCCCEEEEEECC----cchhheeecCCCCcE------------------EEEEEcCC------
Confidence 9995 558888 999999999986 566667777775311 12444443
Q ss_pred cCCCCceEEEE-EcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeecccc
Q 047036 544 ENGKQERHLVA-TVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMH 604 (634)
Q Consensus 544 ~~g~~E~~Ivt-Stg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~~ 604 (634)
| +.|++ +.|+.|.+||+.. ++. .+.+.. ...|..+.|-.
T Consensus 208 --g---~~l~s~~~dg~i~iwd~~~---~~~-------------~~~~~~-~~~v~~~~~sp 247 (319)
T 3frx_A 208 --G---TLIASAGKDGEIMLWNLAA---KKA-------------MYTLSA-QDEVFSLAFSP 247 (319)
T ss_dssp --S---SEEEEEETTCEEEEEETTT---TEE-------------EEEEEC-CSCEEEEEECS
T ss_pred --C---CEEEEEeCCCeEEEEECCC---CcE-------------EEEecC-CCcEEEEEEcC
Confidence 3 35554 7799999999874 211 134443 45677777733
No 24
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.1e-25 Score=224.16 Aligned_cols=190 Identities=9% Similarity=0.115 Sum_probs=138.1
Q ss_pred eEEecCCCCCCCCCCcEEEEeCCCC--cEEEEE-ec-cCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCC
Q 047036 319 MMLMSPLKDGKPQAPGVQQLDIETG--KIVTEW-KF-EKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRD 394 (634)
Q Consensus 319 mllsss~d~~~~~~~TIrlWDleTG--K~V~~l-kg-H~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~ 394 (634)
+|++++.| ++|++||+.++ +++..+ .+ |...| ..++|+|+ +.+|++|+.|++|++||++.
T Consensus 26 ~las~~~D------~~i~lw~~~~~~~~~~~~~~~~~h~~~v--~~v~~sp~--------~~~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 26 ILATGSTD------RKIKLVSVKYDDFTLIDVLDETAHKKAI--RSVAWRPH--------TSLLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp EEEEEESS------SCEEEEECSSSCCEEEEEECTTCCCSCE--EEEEECTT--------SSEEEEEETTSCEEEEEC--
T ss_pred EEEEEcCC------CEEEEEEecCCCeEEEEEEecCCccCCE--EEEEECCC--------CCEEEEEeCCCcEEEEEccc
Confidence 56666665 79999999986 567777 45 99876 46699998 67999999999999999863
Q ss_pred C------CceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccc-cc--cccccccCCCC
Q 047036 395 R------SGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTS-MR--QAKTAFPGLGS 464 (634)
Q Consensus 395 ~------~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t-~r--~akt~L~GH~d 464 (634)
. ..++..+.+|.. .+.+++++|+| +||+||.|++|||||+.. .+ .+...+.+|..
T Consensus 90 ~~~~~~~~~~~~~~~~h~~---------------~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~ 154 (330)
T 2hes_X 90 SADRTFEMDLLAIIEGHEN---------------EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ 154 (330)
T ss_dssp -----CCCEEEEEEC-------------------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS
T ss_pred CcCccccceeEEEEcCCCC---------------cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC
Confidence 2 123455655543 36899999999 799999999999999842 11 24457889999
Q ss_pred CeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccc
Q 047036 465 PITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVT 543 (634)
Q Consensus 465 ~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t 543 (634)
+|++|+|+|+|++|++ +.|++|+|||+.. ...+++..|.+|.+.. ..+.|.|.
T Consensus 155 ~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~--~~~~~~~~~~~h~~~v------------------~~~~~~~~------ 208 (330)
T 2hes_X 155 DVKHVIWHPSEALLASSSYDDTVRIWKDYD--DDWECVAVLNGHEGTV------------------WSSDFDKT------ 208 (330)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEET--TEEEEEEEECCCSSCE------------------EEEEECCS------
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCC--CCeeEEEEccCCCCcE------------------EEEEecCC------
Confidence 9999999999999999 9999999999752 1125666777776411 12444443
Q ss_pred cCCCCceEEEEEcCCeEEEEeChh
Q 047036 544 ENGKQERHLVATVGKFSVIWDFQQ 567 (634)
Q Consensus 544 ~~g~~E~~IvtStg~~viiWdl~~ 567 (634)
+.....+.++.|+.|.+||+..
T Consensus 209 --~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 209 --EGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp --SSSCEEEEEETTSCEEEEEEEE
T ss_pred --CCeeEEEEEeCCCeEEEEEecC
Confidence 1112344457899999999864
No 25
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.94 E-value=7.9e-25 Score=245.00 Aligned_cols=241 Identities=14% Similarity=0.203 Sum_probs=174.4
Q ss_pred CcEEEeee-CCC-eEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCC
Q 047036 256 VQSLTLGA-LDN-SFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKP 330 (634)
Q Consensus 256 ~~~LavG~-~D~-sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~ 330 (634)
..+.++++ +++ .+++.| ..|.+|.....+.........+.+|. .+...+.++.++++|++++.|
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~-------~~v~~v~~s~~g~~l~sgs~D---- 451 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHS-------HFVEDVVLSSDGQFALSGSWD---- 451 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCS-------SCEEEEEECTTSSEEEEEETT----
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCC-------CcEEEEEECCCCCEEEEEeCC----
Confidence 34677777 454 677765 58999987554322222334566663 122333444556677888775
Q ss_pred CCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcc
Q 047036 331 QAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVL 410 (634)
Q Consensus 331 ~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~ 410 (634)
++|++||+.+|++++++.+|...| ..++|+|+ +.+|+||+.|++|++||++.. +. ..+....
T Consensus 452 --g~v~vwd~~~~~~~~~~~~h~~~v--~~~~~s~~--------~~~l~s~s~D~~i~iwd~~~~-~~-~~~~~~~---- 513 (694)
T 3dm0_A 452 --GELRLWDLAAGVSTRRFVGHTKDV--LSVAFSLD--------NRQIVSASRDRTIKLWNTLGE-CK-YTISEGG---- 513 (694)
T ss_dssp --SEEEEEETTTTEEEEEEECCSSCE--EEEEECTT--------SSCEEEEETTSCEEEECTTSC-EE-EEECSST----
T ss_pred --CcEEEEECCCCcceeEEeCCCCCE--EEEEEeCC--------CCEEEEEeCCCEEEEEECCCC-cc-eeeccCC----
Confidence 799999999999999999999986 45699998 678999999999999998754 22 2221000
Q ss_pred ccccccccccCcceEEEEECCCC---eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcE
Q 047036 411 HWTQGHQFSRGTNFQCFASTGDG---SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYL 486 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~dG---~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tI 486 (634)
.+ +...++|++++|++ .|++||.||+|||||+.+. +....+.+|..+|++|+|||||++|++ +.|++|
T Consensus 514 ---~~----h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~-~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i 585 (694)
T 3dm0_A 514 ---EG----HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC-KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVV 585 (694)
T ss_dssp ---TS----CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSBC
T ss_pred ---CC----CCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC-cEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 01 22347899999986 5999999999999999876 477789999999999999999999999 899999
Q ss_pred EEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeCh
Q 047036 487 ILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQ 566 (634)
Q Consensus 487 rLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~ 566 (634)
+|||+. +|+++..+..+.. ...+.|+|. + .+|+++.++.|.|||++
T Consensus 586 ~iwd~~----~~~~~~~~~~~~~-------------------v~~~~~sp~--------~---~~l~~~~~~~i~iwd~~ 631 (694)
T 3dm0_A 586 LLWDLA----EGKKLYSLEANSV-------------------IHALCFSPN--------R---YWLCAATEHGIKIWDLE 631 (694)
T ss_dssp EEEETT----TTEEEECCBCSSC-------------------EEEEEECSS--------S---SEEEEEETTEEEEEETT
T ss_pred EEEECC----CCceEEEecCCCc-------------------EEEEEEcCC--------C---cEEEEEcCCCEEEEECC
Confidence 999986 4555544432210 012344443 2 57888888999999997
Q ss_pred h
Q 047036 567 Q 567 (634)
Q Consensus 567 ~ 567 (634)
.
T Consensus 632 ~ 632 (694)
T 3dm0_A 632 S 632 (694)
T ss_dssp T
T ss_pred C
Confidence 3
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.94 E-value=3.3e-24 Score=230.47 Aligned_cols=249 Identities=14% Similarity=0.183 Sum_probs=184.7
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQA 332 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~ 332 (634)
...++++ +|+.+++.+ ..|.+|..... ....+.+|. .+...+.+++++++|++++.+
T Consensus 305 ~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~------~~~~~~~~~-------~~v~~~~~s~~g~~l~~~~~d------ 365 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQ------HLQTLTGHS-------SSVWGVAFSPDGQTIASASDD------ 365 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSC------EEEEECCCS-------SCEEEEEECTTSSEEEEEETT------
T ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCC------eeEEEeCCC-------CCEEEEEECCCCCEEEEEeCC------
Confidence 4667777 777777654 46888874332 123344442 122334445555667777664
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
++|++||. +|+++.++.+|...| ..++|+|+ ++.|++|+.|++|++||.. + ..++.+.+|...
T Consensus 366 g~v~~~~~-~~~~~~~~~~~~~~v--~~~~~s~d--------g~~l~~~~~d~~v~~~~~~-~-~~~~~~~~~~~~---- 428 (577)
T 2ymu_A 366 KTVKLWNR-NGQLLQTLTGHSSSV--RGVAFSPD--------GQTIASASDDKTVKLWNRN-G-QLLQTLTGHSSS---- 428 (577)
T ss_dssp SEEEEEET-TCCEEEEEECCSSCE--EEEEECTT--------SSCEEEEETTSEEEEECTT-C-CEEEEEECCSSC----
T ss_pred CEEEEEcC-CCCEEEEecCCCCCe--EEEEECCC--------CCEEEEEeCCCEEEEEeCC-C-CEEEEecCCCCC----
Confidence 79999995 589999999999976 45699998 6789999999999999964 2 346777666543
Q ss_pred ccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEE
Q 047036 413 TQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILIC 490 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD 490 (634)
+.+++++|++ +||+|+.|++|+|||..+ +....+.+|..+|++|+|||||++||+ +.|++|+|||
T Consensus 429 -----------v~~~~~s~d~~~l~~~~~d~~v~~w~~~~--~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~ 495 (577)
T 2ymu_A 429 -----------VWGVAFSPDDQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 495 (577)
T ss_dssp -----------EEEEEECTTSSEEEEEETTSEEEEEETTS--CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred -----------eEEEEECCCCCEEEEEcCCCEEEEEECCC--CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEc
Confidence 5789999998 899999999999999754 366788999999999999999999999 8999999999
Q ss_pred cccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChhhhc
Q 047036 491 TLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKN 570 (634)
Q Consensus 491 ~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~v~~ 570 (634)
. +|+++..|.+|.+.. ..+.|+|. | ...++++.|+.|.+||+.
T Consensus 496 ~-----~~~~~~~~~~h~~~v------------------~~l~~s~d--------g--~~l~s~~~dg~v~lwd~~---- 538 (577)
T 2ymu_A 496 R-----NGQLLQTLTGHSSSV------------------RGVAFSPD--------G--QTIASASDDKTVKLWNRN---- 538 (577)
T ss_dssp T-----TSCEEEEEECCSSCE------------------EEEEECTT--------S--SCEEEEETTSEEEEECTT----
T ss_pred C-----CCCEEEEEeCCCCCE------------------EEEEEcCC--------C--CEEEEEECcCEEEEEeCC----
Confidence 4 588888888886411 12445544 3 234445789999999953
Q ss_pred ccccccccccCCcceeeEEEeccCCCeeeecccc
Q 047036 571 SAHECYRNQQGLKSCYCYKIVLKDESIVESRFMH 604 (634)
Q Consensus 571 ~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~~ 604 (634)
++. ...+..|.+.|..+.|-+
T Consensus 539 ~~~-------------~~~~~~h~~~v~~~~fs~ 559 (577)
T 2ymu_A 539 GQL-------------LQTLTGHSSSVWGVAFSP 559 (577)
T ss_dssp SCE-------------EEEEECCSSCEEEEEECT
T ss_pred CCE-------------EEEEcCCCCCEEEEEEcC
Confidence 322 246788999999888843
No 27
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.94 E-value=9.6e-25 Score=219.09 Aligned_cols=198 Identities=7% Similarity=0.036 Sum_probs=146.9
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
.+.++++ +|+.+++.| .+|.||....... ..+..|.+|. ++.+++|+|. .++++|++++.|
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~---~~~~~l~gH~~~V~~v~~s~~------~~g~~l~s~s~D----- 76 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH---KLIDTLTGHEGPVWRVDWAHP------KFGTILASCSYD----- 76 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB---CCCEEECCCSSCEEEEEECCG------GGCSEEEEEETT-----
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc---EEEEEEccccCCeEEEEecCC------CcCCEEEEEcCC-----
Confidence 4677777 788888865 5899998643211 1234566663 2345555432 135677788775
Q ss_pred CCcEEEEeCCCCc--EEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCc-eEEecccCCCC
Q 047036 332 APGVQQLDIETGK--IVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSG-IVQNMVKGDSP 408 (634)
Q Consensus 332 ~~TIrlWDleTGK--~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~-~Vq~l~gh~s~ 408 (634)
++|++||+++|+ .+..+.+|...| ..++|+|+.. +.+|++|+.|++|++||++.... ....+.+|..
T Consensus 77 -~~v~iWd~~~~~~~~~~~~~~h~~~v--~~v~~~p~~~------g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~- 146 (297)
T 2pm7_B 77 -GKVMIWKEENGRWSQIAVHAVHSASV--NSVQWAPHEY------GPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI- 146 (297)
T ss_dssp -TEEEEEEBSSSCBCCCEEECCCSSCE--EEEEECCGGG------CSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS-
T ss_pred -CEEEEEEcCCCceEEEEEeecCCCce--eEEEeCcCCC------CcEEEEEECCCcEEEEEecCCCceeeeeeecccC-
Confidence 799999999984 678899999986 4569999622 46899999999999999987532 1234444443
Q ss_pred ccccccccccccCcceEEEEECCC-------------C-eEEEEECCCcEEEEecccccc---ccccccCCCCCeEEEEE
Q 047036 409 VLHWTQGHQFSRGTNFQCFASTGD-------------G-SIVVGSLDGKIRLYSKTSMRQ---AKTAFPGLGSPITHVDV 471 (634)
Q Consensus 409 V~~~~~g~~y~~~~~fssva~s~d-------------G-~IASGS~DGtIRLWD~~t~r~---akt~L~GH~d~ItsVdf 471 (634)
.+.+++++|+ + +||+||.||+|||||+.+.+. ....|.+|.++|++|+|
T Consensus 147 --------------~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 147 --------------GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp --------------CEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred --------------ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence 3577888875 3 799999999999999876421 34578999999999999
Q ss_pred CCCC---CEEEE-EcCCcEEEEEcc
Q 047036 472 TYDG---KWILG-TTDTYLILICTL 492 (634)
Q Consensus 472 SpDG---k~LlS-S~D~tIrLWD~~ 492 (634)
+|+| ++||+ +.|++|+|||+.
T Consensus 213 sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 213 SPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEES
T ss_pred CCCCCCceEEEEEECCCcEEEEEeC
Confidence 9995 89999 999999999975
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.94 E-value=1.5e-24 Score=233.20 Aligned_cols=226 Identities=15% Similarity=0.224 Sum_probs=169.5
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQA 332 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~ 332 (634)
...++++ +|+.+++.| ..|.+|... .. ....+.+|. .+...+.+++++++|++++.|
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~~-----~~~~~~~~~-------~~v~~~~~s~dg~~l~~~~~d------ 406 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDKTVKLWNRN-GQ-----LLQTLTGHS-------SSVRGVAFSPDGQTIASASDD------ 406 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETT-CC-----EEEEEECCS-------SCEEEEEECTTSSCEEEEETT------
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEcCC-CC-----EEEEecCCC-------CCeEEEEECCCCCEEEEEeCC------
Confidence 4666777 777777765 367777632 11 223444442 122333444555667777665
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
++|++||. +|++++++.+|...| ..++|+|+ +..+++|+.|++|++||... ..+..+.+|..
T Consensus 407 ~~v~~~~~-~~~~~~~~~~~~~~v--~~~~~s~d--------~~~l~~~~~d~~v~~w~~~~--~~~~~~~~~~~----- 468 (577)
T 2ymu_A 407 KTVKLWNR-NGQLLQTLTGHSSSV--WGVAFSPD--------DQTIASASDDKTVKLWNRNG--QLLQTLTGHSS----- 468 (577)
T ss_dssp SEEEEECT-TCCEEEEEECCSSCE--EEEEECTT--------SSEEEEEETTSEEEEEETTS--CEEEEEECCSS-----
T ss_pred CEEEEEeC-CCCEEEEecCCCCCe--EEEEECCC--------CCEEEEEcCCCEEEEEECCC--CEEEEEcCCCC-----
Confidence 79999995 589999999999976 45699998 67999999999999999643 34567765544
Q ss_pred ccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEE
Q 047036 413 TQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILIC 490 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD 490 (634)
.+.+++++|+| +||+|+.|++|||||..+ + ....+.+|..+|++|+|||||++||+ +.|++|+|||
T Consensus 469 ----------~v~~~~~spd~~~las~~~d~~i~iw~~~~-~-~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 469 ----------SVRGVAFSPDGQTIASASDDKTVKLWNRNG-Q-LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp ----------CEEEEEECTTSCEEEEEETTSEEEEEETTS-C-EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ----------CEEEEEEcCCCCEEEEEeCCCEEEEEcCCC-C-EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 36789999999 799999999999999654 3 67789999999999999999999999 8999999999
Q ss_pred cccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEe
Q 047036 491 TLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWD 564 (634)
Q Consensus 491 ~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWd 564 (634)
. +|+++..|.+|.+.. ..+.|+|+ | ...++++.|+.|++||
T Consensus 537 ~-----~~~~~~~~~~h~~~v------------------~~~~fs~d--------g--~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 537 R-----NGQLLQTLTGHSSSV------------------WGVAFSPD--------G--QTIASASSDKTVKLWN 577 (577)
T ss_dssp T-----TSCEEEEEECCSSCE------------------EEEEECTT--------S--SCEEEEETTSCEEEEC
T ss_pred C-----CCCEEEEEcCCCCCE------------------EEEEEcCC--------C--CEEEEEeCCCEEEEeC
Confidence 4 588888888886411 13555554 3 2344557899999997
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.94 E-value=1.2e-24 Score=218.39 Aligned_cols=200 Identities=9% Similarity=0.059 Sum_probs=143.9
Q ss_pred EeCCcceEEecCCCCCCCCCCcEEEEeCCC--CcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEE
Q 047036 313 MRGETNMMLMSPLKDGKPQAPGVQQLDIET--GKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQW 390 (634)
Q Consensus 313 ~~~D~~mllsss~d~~~~~~~TIrlWDleT--GK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklW 390 (634)
++.++++|++++.| ++|++||+++ ++++.+|.+|...| ..++|+|+.. +..|+||+.|++|++|
T Consensus 17 ~s~~g~~las~s~D------~~v~iw~~~~~~~~~~~~l~gH~~~V--~~v~~s~~~~------g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 17 MDYYGKRMATCSSD------KTIKIFEVEGETHKLIDTLTGHEGPV--WRVDWAHPKF------GTILASCSYDGKVMIW 82 (297)
T ss_dssp ECTTSSEEEEEETT------SCEEEEEBCSSCBCCCEEECCCSSCE--EEEEECCGGG------CSEEEEEETTTEEEEE
T ss_pred ECCCCCEEEEEeCC------CEEEEEecCCCCcEEEEEEccccCCe--EEEEecCCCc------CCEEEEEcCCCEEEEE
Confidence 34445667777765 7999999974 47899999999986 4569986411 4799999999999999
Q ss_pred EcCCCC-ceEEecccCCCCccccccccccccCcceEEEEECCC--C-eEEEEECCCcEEEEecccccc-ccccccCCCCC
Q 047036 391 DMRDRS-GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD--G-SIVVGSLDGKIRLYSKTSMRQ-AKTAFPGLGSP 465 (634)
Q Consensus 391 D~R~~~-~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d--G-~IASGS~DGtIRLWD~~t~r~-akt~L~GH~d~ 465 (634)
|++.+. ..+..+.+|.. .+.+++++|+ | +||+|+.||+|||||+.+... ....+.+|..+
T Consensus 83 d~~~~~~~~~~~~~~h~~---------------~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~ 147 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSA---------------SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (297)
T ss_dssp EBSSSCBCCCEEECCCSS---------------CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSC
T ss_pred EcCCCceEEEEEeecCCC---------------ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCc
Confidence 998753 22344544433 4688999986 6 799999999999999876421 23567899999
Q ss_pred eEEEEECCC-------------CCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCC
Q 047036 466 ITHVDVTYD-------------GKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTD 531 (634)
Q Consensus 466 ItsVdfSpD-------------Gk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~ 531 (634)
|++++|+|+ |++||+ +.|++|+|||+.........+..|.+|.+.. ..
T Consensus 148 v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V------------------~~ 209 (297)
T 2pm7_B 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV------------------RD 209 (297)
T ss_dssp EEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE------------------EE
T ss_pred cceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCce------------------EE
Confidence 999999997 579999 9999999999862110111444566665311 23
Q ss_pred cccccccccccccCCCCceEEEE-EcCCeEEEEeChh
Q 047036 532 NKIHGGHFSWVTENGKQERHLVA-TVGKFSVIWDFQQ 567 (634)
Q Consensus 532 i~Ft~a~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~~ 567 (634)
+.|+|.. .....|++ |.|+.|.+||+..
T Consensus 210 v~~sp~~--------~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 210 VAWSPTV--------LLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEECCCC--------SSSEEEEEEETTSCEEEEEESS
T ss_pred EEECCCC--------CCceEEEEEECCCcEEEEEeCC
Confidence 5555541 11245555 7799999999864
No 30
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.93 E-value=6e-24 Score=212.14 Aligned_cols=194 Identities=19% Similarity=0.259 Sum_probs=150.1
Q ss_pred eeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEE
Q 047036 310 ALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQ 389 (634)
Q Consensus 310 ~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIkl 389 (634)
.+.+++++++|++++.| ++|++||+.+|+.+..+.+|...| ..++|+|+ +++|++|+.|++|++
T Consensus 28 ~~~~s~~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~h~~~v--~~~~~~~~--------~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 28 SVKFSPNGEWLASSSAD------KLIKIWGAYDGKFEKTISGHKLGI--SDVAWSSD--------SNLLVSASDDKTLKI 91 (312)
T ss_dssp EEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECCCSSCE--EEEEECTT--------SSEEEEEETTSEEEE
T ss_pred EEEECCCCCEEEEeeCC------CeEEEEeCCCcccchhhccCCCce--EEEEEcCC--------CCEEEEECCCCEEEE
Confidence 34444455667777765 699999999999999999999986 46699998 679999999999999
Q ss_pred EEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEE
Q 047036 390 WDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITH 468 (634)
Q Consensus 390 WD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~Its 468 (634)
||++++.+ +..+.+|.. .+.+++++|++ +||+|+.||+|+|||+.+++ ....+++|..+|.+
T Consensus 92 wd~~~~~~-~~~~~~~~~---------------~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~ 154 (312)
T 4ery_A 92 WDVSSGKC-LKTLKGHSN---------------YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSDPVSA 154 (312)
T ss_dssp EETTTCCE-EEEEECCSS---------------CEEEEEECSSSSEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEE
T ss_pred EECCCCcE-EEEEcCCCC---------------CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE-EEEEecCCCCcEEE
Confidence 99998654 567765544 35788999998 89999999999999998864 67789999999999
Q ss_pred EEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCC
Q 047036 469 VDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGK 547 (634)
Q Consensus 469 VdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~ 547 (634)
|+|+|+|++|++ +.|++|++||+. .++.+..+..+.. +. ...+.|+|. +
T Consensus 155 ~~~~~~~~~l~~~~~d~~i~~wd~~----~~~~~~~~~~~~~---~~--------------~~~~~~~~~--------~- 204 (312)
T 4ery_A 155 VHFNRDGSLIVSSSYDGLCRIWDTA----SGQCLKTLIDDDN---PP--------------VSFVKFSPN--------G- 204 (312)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT----TCCEEEEECCSSC---CC--------------EEEEEECTT--------S-
T ss_pred EEEcCCCCEEEEEeCCCcEEEEECC----CCceeeEEeccCC---Cc--------------eEEEEECCC--------C-
Confidence 999999999999 899999999986 4555444332211 00 011333333 2
Q ss_pred CceEEEEEcCCeEEEEeChh
Q 047036 548 QERHLVATVGKFSVIWDFQQ 567 (634)
Q Consensus 548 ~E~~IvtStg~~viiWdl~~ 567 (634)
...++++.++.|.+||+..
T Consensus 205 -~~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 205 -KYILAATLDNTLKLWDYSK 223 (312)
T ss_dssp -SEEEEEETTTEEEEEETTT
T ss_pred -CEEEEEcCCCeEEEEECCC
Confidence 3455557899999999974
No 31
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.93 E-value=3.6e-24 Score=221.31 Aligned_cols=217 Identities=12% Similarity=0.107 Sum_probs=148.6
Q ss_pred CCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCC------------------------
Q 047036 315 GETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSS------------------------ 370 (634)
Q Consensus 315 ~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~------------------------ 370 (634)
+++++|++++.| ++|++||+.+++.+..+..|...| ..++|+|+++.-
T Consensus 74 ~d~~~l~s~s~D------g~v~vWd~~~~~~~~~~~~~~~~v--~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~ 145 (354)
T 2pbi_B 74 KDKRRIVSSSQD------GKVIVWDSFTTNKEHAVTMPCTWV--MACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAA 145 (354)
T ss_dssp TTSSEEEEEETT------SEEEEEETTTCCEEEEEECSSSCC--CEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGG
T ss_pred CCCCEEEEEeCC------CeEEEEECCCCCcceEEecCCCCE--EEEEECCCCCEEEEeeCCCCEEEEEEeccccccccc
Confidence 344556666654 688888888887776666655443 123444443200
Q ss_pred -------C---------CCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECC--C
Q 047036 371 -------Q---------LDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG--D 432 (634)
Q Consensus 371 -------q---------~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~--d 432 (634)
+ ...+..|++|+.|++|++||++++. +++.+.+|... +.++++++ +
T Consensus 146 ~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~-~~~~~~~h~~~---------------v~~~~~~~~~~ 209 (354)
T 2pbi_B 146 KKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ-LLQSFHGHGAD---------------VLCLDLAPSET 209 (354)
T ss_dssp GCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-EEEEEECCSSC---------------EEEEEECCCSS
T ss_pred cceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe-EEEEEcCCCCC---------------eEEEEEEeCCC
Confidence 0 0014689999999999999999865 46777766543 46677765 4
Q ss_pred C-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCC
Q 047036 433 G-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGN 510 (634)
Q Consensus 433 G-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~ 510 (634)
| +||+||.||+|+|||+.+++ +...+.+|..+|++|+|+|+|++|++ +.|++|+|||++ .++.+..|..+..
T Consensus 210 g~~l~sgs~Dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~----~~~~~~~~~~~~~- 283 (354)
T 2pbi_B 210 GNTFVSGGCDKKAMVWDMRSGQ-CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLR----ADREVAIYSKESI- 283 (354)
T ss_dssp CCEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----TTEEEEEECCTTC-
T ss_pred CCEEEEEeCCCeEEEEECCCCc-EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC----CCcEEEEEcCCCc-
Confidence 5 79999999999999998874 77789999999999999999999999 999999999986 3443333332110
Q ss_pred CCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChhhhcccccccccccCCcceeeEEE
Q 047036 511 KIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKI 590 (634)
Q Consensus 511 ~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i 590 (634)
......+.|+|. | ...++++.|+.|.+||+.. +.. ...+
T Consensus 284 ---------------~~~~~~~~~s~~--------g--~~l~~g~~d~~i~vwd~~~---~~~-------------~~~l 322 (354)
T 2pbi_B 284 ---------------IFGASSVDFSLS--------G--RLLFAGYNDYTINVWDVLK---GSR-------------VSIL 322 (354)
T ss_dssp ---------------CSCEEEEEECTT--------S--SEEEEEETTSCEEEEETTT---CSE-------------EEEE
T ss_pred ---------------ccceeEEEEeCC--------C--CEEEEEECCCcEEEEECCC---Cce-------------EEEE
Confidence 000012333333 3 2344457799999999853 322 2467
Q ss_pred eccCCCeeeecc
Q 047036 591 VLKDESIVESRF 602 (634)
Q Consensus 591 ~~~~~~i~~~~f 602 (634)
..|...|..+.|
T Consensus 323 ~~h~~~v~~l~~ 334 (354)
T 2pbi_B 323 FGHENRVSTLRV 334 (354)
T ss_dssp CCCSSCEEEEEE
T ss_pred ECCCCcEEEEEE
Confidence 789999998888
No 32
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=2.4e-24 Score=238.61 Aligned_cols=199 Identities=12% Similarity=0.095 Sum_probs=151.8
Q ss_pred CCcEEEeee-CCCeEEEe--cCeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCC
Q 047036 255 GVQSLTLGA-LDNSFLVS--DLGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKP 330 (634)
Q Consensus 255 ~~~~LavG~-~D~sfvv~--G~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~ 330 (634)
.+...+++| +|+.+++. +..|.+|...... ....|.+|. .+..++|+|+ +++|++++.|
T Consensus 18 ~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~-----~~~~~~~h~~~v~~~~~spd--------g~~lasg~~d---- 80 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLT-----DTEIYTEHSHQTTVAKTSPS--------GYYCASGDVH---- 80 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEETTEEEEEETTCSS-----CCEEECCCSSCEEEEEECTT--------SSEEEEEETT----
T ss_pred cCceeEEeeCCCCCEEEeCCCCEEEEecCCCcc-----cCeEecCCCCceEEEEECCC--------CcEEEEEeCC----
Confidence 345677888 88877775 4688888864332 233456663 2345556655 4567777765
Q ss_pred CCCcEEEEeCCCC--cEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC----CeEEEEEcCCCCceEEeccc
Q 047036 331 QAPGVQQLDIETG--KIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD----NRLCQWDMRDRSGIVQNMVK 404 (634)
Q Consensus 331 ~~~TIrlWDleTG--K~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D----~tIklWD~R~~~~~Vq~l~g 404 (634)
++|++||+.++ .++.++.+|...| ..++|+|+ +..|++++.+ ++|++||... .+..+.+
T Consensus 81 --~~v~lWd~~~~~~~~~~~~~~~~~~v--~~v~fs~d--------g~~l~~~~~~~~~~~~v~~wd~~~---~~~~l~g 145 (611)
T 1nr0_A 81 --GNVRIWDTTQTTHILKTTIPVFSGPV--KDISWDSE--------SKRIAAVGEGRERFGHVFLFDTGT---SNGNLTG 145 (611)
T ss_dssp --SEEEEEESSSTTCCEEEEEECSSSCE--EEEEECTT--------SCEEEEEECCSSCSEEEEETTTCC---BCBCCCC
T ss_pred --CCEEEeECCCCcceeeEeecccCCce--EEEEECCC--------CCEEEEEECCCCceeEEEEeeCCC---CcceecC
Confidence 79999999765 4567899999986 46699999 6789888876 3899999642 2355666
Q ss_pred CCCCccccccccccccCcceEEEEECCCC--eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-E
Q 047036 405 GDSPVLHWTQGHQFSRGTNFQCFASTGDG--SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-T 481 (634)
Q Consensus 405 h~s~V~~~~~g~~y~~~~~fssva~s~dG--~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S 481 (634)
|..+ +.+++|+|++ .||+||.|++|||||..+++ ...+|.+|..+|++|+|||||++||+ +
T Consensus 146 h~~~---------------v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~-~~~~l~~H~~~V~~v~fspdg~~las~s 209 (611)
T 1nr0_A 146 QARA---------------MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK-FKSTFGEHTKFVHSVRYNPDGSLFASTG 209 (611)
T ss_dssp CSSC---------------EEEEEECSSSSCEEEEEETTSCEEEEETTTBE-EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCC---------------ceEEEECCCCCeEEEEEeCCCeEEEEECCCCe-EeeeeccccCceEEEEECCCCCEEEEEE
Confidence 6543 5789999997 49999999999999988764 67789999999999999999999999 9
Q ss_pred cCCcEEEEEcccccCCCCeeeeec
Q 047036 482 TDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 482 ~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
.|++|+|||+. +|+++..|.
T Consensus 210 ~D~~i~lwd~~----~g~~~~~~~ 229 (611)
T 1nr0_A 210 GDGTIVLYNGV----DGTKTGVFE 229 (611)
T ss_dssp TTSCEEEEETT----TCCEEEECB
T ss_pred CCCcEEEEECC----CCcEeeeec
Confidence 99999999975 577766663
No 33
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=1.5e-24 Score=229.03 Aligned_cols=207 Identities=12% Similarity=0.067 Sum_probs=147.2
Q ss_pred cEEEeee-C-CCeEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCC
Q 047036 257 QSLTLGA-L-DNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKP 330 (634)
Q Consensus 257 ~~LavG~-~-D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~ 330 (634)
.+.++++ | +..+|+.| ..|.||....... .....+.+|. ++.+.+|+|. ++++|++++.|
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~---~~~~~~~gH~~~V~~l~f~p~-------~~~~l~s~s~D---- 186 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK---PTFIKGIGAGGSITGLKFNPL-------NTNQFYASSME---- 186 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC---CEEECCCSSSCCCCEEEECSS-------CTTEEEEECSS----
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc---eeEEEccCCCCCEEEEEEeCC-------CCCEEEEEeCC----
Confidence 3666777 4 55566654 4788887544321 1233444552 3455666653 45678888775
Q ss_pred CCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcc
Q 047036 331 QAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVL 410 (634)
Q Consensus 331 ~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~ 410 (634)
++|++||++++.+......|...+.++.++|+|+ +.+|++|+.|++|++||++.+ .+..+.+|..
T Consensus 187 --~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~g~~dg~i~~wd~~~~--~~~~~~~h~~--- 251 (435)
T 4e54_B 187 --GTTRLQDFKGNILRVFASSDTINIWFCSLDVSAS--------SRMVVTGDNVGNVILLNMDGK--ELWNLRMHKK--- 251 (435)
T ss_dssp --SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETT--------TTEEEEECSSSBEEEEESSSC--BCCCSBCCSS---
T ss_pred --CEEEEeeccCCceeEEeccCCCCccEEEEEECCC--------CCEEEEEeCCCcEeeeccCcc--eeEEEecccc---
Confidence 7999999987655444444444433455699998 679999999999999999753 2456655544
Q ss_pred ccccccccccCcceEEEEECCCC--eEEEEECCCcEEEEecccccccc--ccccCCCCCeEEEEECCCCCEEEE-EcCCc
Q 047036 411 HWTQGHQFSRGTNFQCFASTGDG--SIVVGSLDGKIRLYSKTSMRQAK--TAFPGLGSPITHVDVTYDGKWILG-TTDTY 485 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~dG--~IASGS~DGtIRLWD~~t~r~ak--t~L~GH~d~ItsVdfSpDGk~LlS-S~D~t 485 (634)
.+.+++++|++ .||+||.||+|+|||+.+.+... ....+|..+|++|+|||||++|++ +.|++
T Consensus 252 ------------~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~ 319 (435)
T 4e54_B 252 ------------KVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE 319 (435)
T ss_dssp ------------CEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC
T ss_pred ------------eEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE
Confidence 36789999987 58899999999999987653211 234689999999999999999999 99999
Q ss_pred EEEEEcccccCCCCeeeeecCCC
Q 047036 486 LILICTLFSDKDGKTKTGFSGRM 508 (634)
Q Consensus 486 IrLWD~~~~~~~G~~~~gF~gh~ 508 (634)
|+|||+. .+.+...+.+|.
T Consensus 320 i~iwd~~----~~~~~~~~~~~~ 338 (435)
T 4e54_B 320 IRVYSAS----QWDCPLGLIPHP 338 (435)
T ss_dssp EEEEESS----SSSSEEEECCCC
T ss_pred EEEEECC----CCccceEEeccc
Confidence 9999986 566666665554
No 34
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=1.9e-23 Score=207.64 Aligned_cols=267 Identities=12% Similarity=0.124 Sum_probs=183.2
Q ss_pred CCcEEEeee-CC-CeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCC
Q 047036 255 GVQSLTLGA-LD-NSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGK 329 (634)
Q Consensus 255 ~~~~LavG~-~D-~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~ 329 (634)
.+.+.++++ ++ +.+++.| .+|.||...............+.+|. .+...+.+++++++|++++.|
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~-------~~V~~~~~s~dg~~l~s~~~d--- 107 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS-------HFVSDVVISSDGQFALSGSWD--- 107 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCS-------SCEEEEEECTTSSEEEEEETT---
T ss_pred cCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCC-------CCEEEEEECCCCCEEEEEccc---
Confidence 345778888 66 5788765 57999997554322111233455552 233344445566777777775
Q ss_pred CCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCc
Q 047036 330 PQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPV 409 (634)
Q Consensus 330 ~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V 409 (634)
++|++|+...+........|...+ ....++|+ +..+++|+.|+.+++||++........+.+|.
T Consensus 108 ---~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--------~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~--- 171 (340)
T 4aow_A 108 ---GTLRLWDLTTGTTTRRFVGHTKDV--LSVAFSSD--------NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHS--- 171 (340)
T ss_dssp ---SEEEEEETTTTEEEEEEECCSSCE--EEEEECTT--------SSCEEEEETTSCEEEECTTSCEEEEECSSSCS---
T ss_pred ---ccceEEeecccceeeeecCCCCce--eEEEEeec--------CccceeecCCCeEEEEEeCCCceEEEEecccc---
Confidence 799999999999999999888865 45578887 57899999999999999986544333333333
Q ss_pred cccccccccccCcceEEEEECCCC---eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCc
Q 047036 410 LHWTQGHQFSRGTNFQCFASTGDG---SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTY 485 (634)
Q Consensus 410 ~~~~~g~~y~~~~~fssva~s~dG---~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~t 485 (634)
..+.++++++++ .+|+|+.|++|++||+.+.+ ....+.+|..+|++|+|+|||++|++ +.|++
T Consensus 172 ------------~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~-~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~ 238 (340)
T 4aow_A 172 ------------EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ 238 (340)
T ss_dssp ------------SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred ------------CcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc-eeeEecCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence 235677787664 58999999999999998864 77889999999999999999999999 99999
Q ss_pred EEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeC
Q 047036 486 LILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDF 565 (634)
Q Consensus 486 IrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl 565 (634)
|+|||+. .++.+..+.++.. . ..+.|.|. ...++++.|+.|.+||+
T Consensus 239 i~iwd~~----~~~~~~~~~~~~~-----------------v--~~~~~~~~-----------~~~~~~~~d~~i~iwd~ 284 (340)
T 4aow_A 239 AMLWDLN----EGKHLYTLDGGDI-----------------I--NALCFSPN-----------RYWLCAATGPSIKIWDL 284 (340)
T ss_dssp EEEEETT----TTEEEEEEECSSC-----------------E--EEEEECSS-----------SSEEEEEETTEEEEEET
T ss_pred EEEEEec----cCceeeeecCCce-----------------E--EeeecCCC-----------CceeeccCCCEEEEEEC
Confidence 9999986 4555544443321 0 12333332 25778889999999998
Q ss_pred hhhhc-ccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 566 QQVKN-SAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 566 ~~v~~-~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
+.-.. ..+. ..+.......+...|..+.|
T Consensus 285 ~~~~~~~~~~--------~~~~~~~~~~h~~~v~~l~~ 314 (340)
T 4aow_A 285 EGKIIVDELK--------QEVISTSSKAEPPQCTSLAW 314 (340)
T ss_dssp TTTEEEEEEC--------CC-------CCCCCEEEEEE
T ss_pred CCCeEEEecc--------ccceeeeccCCCCCEEEEEE
Confidence 73211 0000 01112345567788888777
No 35
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=3.6e-25 Score=225.31 Aligned_cols=234 Identities=7% Similarity=0.006 Sum_probs=158.3
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQA 332 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~ 332 (634)
.+.++.+ +|+.+++.| ..|.||.....+.. ....+.+|. .+...+.+++++++|++++.|
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~---~~~~~~~h~-------~~v~~~~~s~~~~~l~s~s~d------ 76 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWK---HARTFSDHD-------KIVTCVDWAPKSNRIVTCSQD------ 76 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEE---ECCCBCCCS-------SCEEEEEECTTTCCEEEEETT------
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceE---EEEEEecCC-------ceEEEEEEeCCCCEEEEEeCC------
Confidence 4566677 788877765 47889987654211 112233442 233344445556677777765
Q ss_pred CcEEEEeCCCCc---EEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCc--eEEeccc-CC
Q 047036 333 PGVQQLDIETGK---IVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSG--IVQNMVK-GD 406 (634)
Q Consensus 333 ~TIrlWDleTGK---~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~--~Vq~l~g-h~ 406 (634)
++|++||+.+++ .+..+.+|...| ..++|+|+ +..+++|+.|++|++||++.+.. +++.+.+ |.
T Consensus 77 ~~v~vwd~~~~~~~~~~~~~~~~~~~v--~~~~~~~~--------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~ 146 (377)
T 3dwl_C 77 RNAYVYEKRPDGTWKQTLVLLRLNRAA--TFVRWSPN--------EDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLR 146 (377)
T ss_dssp SSEEEC------CCCCEEECCCCSSCE--EEEECCTT--------SSCCEEEESSSCEEECCC-----CCCCEEECSSCC
T ss_pred CeEEEEEcCCCCceeeeeEecccCCce--EEEEECCC--------CCEEEEEecCCeEEEEEECCcccceeeeEeecccC
Confidence 699999999988 788899999976 46699998 67899999999999999997642 2345543 33
Q ss_pred CCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecc------------------ccccccccccCCCCCeE
Q 047036 407 SPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKT------------------SMRQAKTAFPGLGSPIT 467 (634)
Q Consensus 407 s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~------------------t~r~akt~L~GH~d~It 467 (634)
..+.+++++|+| +||+|+.||+|+|||+. .+ .....+ +|..+|+
T Consensus 147 ---------------~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~v~ 209 (377)
T 3dwl_C 147 ---------------STILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFN-TVCAEY-PSGGWVH 209 (377)
T ss_dssp ---------------SCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEE-EEEECC-CCSSSEE
T ss_pred ---------------CCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchh-hhhhcc-cCCceEE
Confidence 346899999998 79999999999999974 22 244556 9999999
Q ss_pred EEEECCCCCEEEE-EcCCcEEEEEcccccCCCCe----eeeecCCCCCCCCCceeEeecCCCccccCCCccccccccccc
Q 047036 468 HVDVTYDGKWILG-TTDTYLILICTLFSDKDGKT----KTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWV 542 (634)
Q Consensus 468 sVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~----~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~ 542 (634)
+|+|+|||++|++ +.|++|+|||+. .+++ +..+.+|... ...+.|+|.
T Consensus 210 ~~~~sp~~~~l~~~~~d~~i~iwd~~----~~~~~~~~~~~~~~~~~~------------------v~~~~~s~~----- 262 (377)
T 3dwl_C 210 AVGFSPSGNALAYAGHDSSVTIAYPS----APEQPPRALITVKLSQLP------------------LRSLLWANE----- 262 (377)
T ss_dssp EEEECTTSSCEEEEETTTEEC-CEEC----STTSCEEECCCEECSSSC------------------EEEEEEEET-----
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECC----CCCCcceeeEeecCCCCc------------------eEEEEEcCC-----
Confidence 9999999999999 899999999986 3443 3444444320 012444443
Q ss_pred ccCCCCceEEEEEcCCeEEEEeCh
Q 047036 543 TENGKQERHLVATVGKFSVIWDFQ 566 (634)
Q Consensus 543 t~~g~~E~~IvtStg~~viiWdl~ 566 (634)
| +.|+++.++.+++|+..
T Consensus 263 ---~---~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 263 ---S---AIVAAGYNYSPILLQGN 280 (377)
T ss_dssp ---T---EEEEEESSSSEEEECCC
T ss_pred ---C---CEEEEEcCCcEEEEEeC
Confidence 3 67888777778888875
No 36
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.93 E-value=6.8e-25 Score=222.50 Aligned_cols=222 Identities=11% Similarity=0.048 Sum_probs=156.7
Q ss_pred CCcceEEecCCCCCCCCCCcEEEEeCCCCc--EEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEc
Q 047036 315 GETNMMLMSPLKDGKPQAPGVQQLDIETGK--IVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDM 392 (634)
Q Consensus 315 ~D~~mllsss~d~~~~~~~TIrlWDleTGK--~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~ 392 (634)
.++++|++++.| ++|++||+.+|+ ++.+|++|.+.| ..++|+|+.. +.+|+||+.|++|++||+
T Consensus 23 ~~g~~lasgs~D------~~v~lwd~~~~~~~~~~~l~gH~~~V--~~v~~~~~~~------~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 23 YYGTRLATCSSD------RSVKIFDVRNGGQILIADLRGHEGPV--WQVAWAHPMY------GNILASCSYDRKVIIWRE 88 (316)
T ss_dssp GGGCEEEEEETT------TEEEEEEEETTEEEEEEEEECCSSCE--EEEEECCGGG------SSCEEEEETTSCEEEECC
T ss_pred CCCCEEEEEeCC------CeEEEEEecCCCcEEEEEEcCCCccE--EEEEeCCCCC------CCEEEEEECCCEEEEEEC
Confidence 344567777765 799999999885 578899999986 4569986311 468999999999999999
Q ss_pred CCCC-ceEEecccCCCCccccccccccccCcceEEEEECCC--C-eEEEEECCCcEEEEecccccc--ccccccCCCCCe
Q 047036 393 RDRS-GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD--G-SIVVGSLDGKIRLYSKTSMRQ--AKTAFPGLGSPI 466 (634)
Q Consensus 393 R~~~-~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d--G-~IASGS~DGtIRLWD~~t~r~--akt~L~GH~d~I 466 (634)
+++. ..+..+.+|... +.+++++|+ | +||+||.||+|||||+.+... ....+.+|..+|
T Consensus 89 ~~~~~~~~~~~~~h~~~---------------V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v 153 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSS---------------VNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGC 153 (316)
T ss_dssp SSSCCCEEEEECCCSSC---------------CCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCB
T ss_pred CCCcceEEEEccCCCCc---------------eEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCc
Confidence 9753 234556555543 468899987 6 799999999999999875321 246778999999
Q ss_pred EEEEECCC-----------------CCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCcccc
Q 047036 467 THVDVTYD-----------------GKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLA 528 (634)
Q Consensus 467 tsVdfSpD-----------------Gk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~ 528 (634)
.+|+|+|+ |++||+ +.|++|+|||+... ...+++..|.+|.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~-~~~~~~~~l~~h~~~V----------------- 215 (316)
T 3bg1_A 154 NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED-GQWKEEQKLEAHSDWV----------------- 215 (316)
T ss_dssp CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTT-SCEEEEECCBCCSSCE-----------------
T ss_pred ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCC-CccceeeecccCCCce-----------------
Confidence 99999998 578998 89999999997410 0113455566665311
Q ss_pred CCCcccccccccccccCCCCceEEEE-EcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeeccc
Q 047036 529 GTDNKIHGGHFSWVTENGKQERHLVA-TVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFM 603 (634)
Q Consensus 529 g~~i~Ft~a~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~ 603 (634)
..+.|+|..- .....|++ |.|+.|.+|++.....+... ...+..+...|..+.|-
T Consensus 216 -~~v~~sp~~~-------~~~~~las~s~D~~v~iw~~~~~~~~~~~------------~~~~~~~~~~v~~v~~s 271 (316)
T 3bg1_A 216 -RDVAWAPSIG-------LPTSTIASCSQDGRVFIWTCDDASSNTWS------------PKLLHKFNDVVWHVSWS 271 (316)
T ss_dssp -EEEECCCCSS-------CSCCEEEEEETTCEEEEEECSSTTCCCCB------------CCEEEECSSCEEEEEEC
T ss_pred -EEEEecCCCC-------CCCceEEEEcCCCeEEEEEccCccccchh------------hhhhhcCCCcEEEEEEc
Confidence 2345555421 11235554 78999999998753222111 12355677888888883
No 37
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.93 E-value=3.7e-24 Score=222.50 Aligned_cols=232 Identities=13% Similarity=0.152 Sum_probs=150.8
Q ss_pred eCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcC
Q 047036 314 RGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMR 393 (634)
Q Consensus 314 ~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R 393 (634)
++++++|++++.| ++|++||+.+|+.+..+++|...|. .++|+|+ ++.+++|+.|++|++||+.
T Consensus 75 sp~~~~l~s~s~D------~~v~iWd~~~~~~~~~~~~h~~~v~--~~~~s~~--------g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 75 TPEKNWIVSASQD------GRLIVWNALTSQKTHAIKLHCPWVM--ECAFAPN--------GQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp CTTSSCEEEEETT------SEEEEEETTTTEEEEEEECCCTTCC--CCEECTT--------SSEEEECCSSSCCEEEECC
T ss_pred cCCCCEEEEEeCC------CeEEEEECCCCccceEEecCCCCEE--EEEECCC--------CCEEEEeeCCCcEEEEECC
Confidence 3445667777775 7999999999999999999999873 4599998 4556666666666666654
Q ss_pred CCC------ceEEecccCCCCc----------------------cccc--cccc---------cccCcceEEEEECC-CC
Q 047036 394 DRS------GIVQNMVKGDSPV----------------------LHWT--QGHQ---------FSRGTNFQCFASTG-DG 433 (634)
Q Consensus 394 ~~~------~~Vq~l~gh~s~V----------------------~~~~--~g~~---------y~~~~~fssva~s~-dG 433 (634)
... .+...+.+|...| ..|. .+.. ..+...+.++++++ ++
T Consensus 139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 218 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNA 218 (380)
T ss_dssp CCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSC
T ss_pred CCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCC
Confidence 210 0112223332211 1111 0000 01234567888865 66
Q ss_pred -eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCC
Q 047036 434 -SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNK 511 (634)
Q Consensus 434 -~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~ 511 (634)
.||+||.||+|||||+.........+.+|..+|++|+|+|||++|++ +.|++|+|||++ +|+++..|..+....
T Consensus 219 ~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~----~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 219 NMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR----TGHQLQVYNREPDRN 294 (380)
T ss_dssp CEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETT----TTEEEEEECCCCSSS
T ss_pred CEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC----CCcEEEEeccccccc
Confidence 79999999999999987433467789999999999999999999999 899999999986 677777776554211
Q ss_pred CCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChhhhcccccccccccCCcceeeEEE-
Q 047036 512 IPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKI- 590 (634)
Q Consensus 512 ~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i- 590 (634)
+.+. ...+...|++. | ...++++.++.|.+||+.. +... +.+
T Consensus 295 ------------~~~~----~~v~~~~~s~~---g--~~l~~g~~dg~i~vwd~~~---~~~~-------------~~~~ 337 (380)
T 3iz6_a 295 ------------DNEL----PIVTSVAFSIS---G--RLLFAGYSNGDCYVWDTLL---AEMV-------------LNLG 337 (380)
T ss_dssp ------------CCSS----CSCSEEEECSS---S--SEEEEECTTSCEEEEETTT---CCEE-------------EEEC
T ss_pred ------------cccc----CceEEEEECCC---C--CEEEEEECCCCEEEEECCC---CceE-------------EEEe
Confidence 0000 01122334431 3 2344446799999999752 2211 223
Q ss_pred ---eccCCCeeeecc
Q 047036 591 ---VLKDESIVESRF 602 (634)
Q Consensus 591 ---~~~~~~i~~~~f 602 (634)
..|...|.++.|
T Consensus 338 ~~~~~h~~~v~~l~~ 352 (380)
T 3iz6_a 338 TLQNSHEGRISCLGL 352 (380)
T ss_dssp CSCSSCCCCCCEEEE
T ss_pred cccCCCCCceEEEEE
Confidence 457777887777
No 38
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.93 E-value=8.6e-25 Score=221.75 Aligned_cols=198 Identities=9% Similarity=-0.021 Sum_probs=144.8
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
.+.++.+ +|+.+++.| .+|.||....++. .....|.+|. ++.+++|+|. .++++|++++.|
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~---~~~~~l~gH~~~V~~v~~~~~------~~~~~l~s~s~D----- 80 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ---ILIADLRGHEGPVWQVAWAHP------MYGNILASCSYD----- 80 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEE---EEEEEEECCSSCEEEEEECCG------GGSSCEEEEETT-----
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc---EEEEEEcCCCccEEEEEeCCC------CCCCEEEEEECC-----
Confidence 4677777 788887765 4788898654321 1233466663 2344555432 135677888775
Q ss_pred CCcEEEEeCCCC--cEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCce--EEecccCCC
Q 047036 332 APGVQQLDIETG--KIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGI--VQNMVKGDS 407 (634)
Q Consensus 332 ~~TIrlWDleTG--K~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~--Vq~l~gh~s 407 (634)
++|++||+++| +.+.++.+|...|. .++|+|+.. +.+|++|+.|++|++||++.+... ...+.+|..
T Consensus 81 -~~v~iWd~~~~~~~~~~~~~~h~~~V~--~v~~~p~~~------g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 81 -RKVIIWREENGTWEKSHEHAGHDSSVN--SVCWAPHDY------GLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp -SCEEEECCSSSCCCEEEEECCCSSCCC--EEEECCTTT------CSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred -CEEEEEECCCCcceEEEEccCCCCceE--EEEECCCCC------CcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence 79999999998 47888999999874 569999732 468999999999999999875321 233444443
Q ss_pred CccccccccccccCcceEEEEECCC-----------------C-eEEEEECCCcEEEEeccccc--cccccccCCCCCeE
Q 047036 408 PVLHWTQGHQFSRGTNFQCFASTGD-----------------G-SIVVGSLDGKIRLYSKTSMR--QAKTAFPGLGSPIT 467 (634)
Q Consensus 408 ~V~~~~~g~~y~~~~~fssva~s~d-----------------G-~IASGS~DGtIRLWD~~t~r--~akt~L~GH~d~It 467 (634)
. +.+++++|+ + +||+||.||+|||||..+.. .....|.+|.++|+
T Consensus 152 ~---------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~ 216 (316)
T 3bg1_A 152 G---------------CNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVR 216 (316)
T ss_dssp C---------------BCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEE
T ss_pred C---------------cceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceE
Confidence 3 345556654 3 79999999999999986431 24567899999999
Q ss_pred EEEECCCC----CEEEE-EcCCcEEEEEcc
Q 047036 468 HVDVTYDG----KWILG-TTDTYLILICTL 492 (634)
Q Consensus 468 sVdfSpDG----k~LlS-S~D~tIrLWD~~ 492 (634)
+|+|+|+| ++||+ +.|++|+|||+.
T Consensus 217 ~v~~sp~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 217 DVAWAPSIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp EEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred EEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence 99999997 88999 999999999975
No 39
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=1.8e-23 Score=213.66 Aligned_cols=184 Identities=14% Similarity=0.127 Sum_probs=143.2
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCC-------CcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEE
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIET-------GKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLC 388 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleT-------GK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIk 388 (634)
++++|++++.| ++|++||+.+ |+.+..+.+|...| ..++|+|+ +.++++|+.|++|+
T Consensus 38 d~~~l~sgs~D------~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V--~~~~~~~~--------~~~l~s~s~D~~v~ 101 (343)
T 2xzm_R 38 DSPVLISGSRD------KTVMIWKLYEEEQNGYFGIPHKALTGHNHFV--SDLALSQE--------NCFAISSSWDKTLR 101 (343)
T ss_dssp CCCEEEEEETT------SCEEEEEECSSCCSSBSEEEEEEECCCSSCE--EEEEECSS--------TTEEEEEETTSEEE
T ss_pred CCCEEEEEcCC------CEEEEEECCcCCcccccccccchhccCCCce--EEEEECCC--------CCEEEEEcCCCcEE
Confidence 66778888876 7999999974 56788999999986 45699998 67999999999999
Q ss_pred EEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccccc--ccccCCCCC
Q 047036 389 QWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAK--TAFPGLGSP 465 (634)
Q Consensus 389 lWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~ak--t~L~GH~d~ 465 (634)
+||++++.. +..+.+|..+ +.+++++|+| +||+||.||+|||||+.+. ... ....+|..+
T Consensus 102 lwd~~~~~~-~~~~~~h~~~---------------v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 102 LWDLRTGTT-YKRFVGHQSE---------------VYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDW 164 (343)
T ss_dssp EEETTSSCE-EEEEECCCSC---------------EEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSC
T ss_pred EEECCCCcE-EEEEcCCCCc---------------EEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCce
Confidence 999998654 5777766543 5789999998 7999999999999998742 111 223489999
Q ss_pred eEEEEECCCC----------CEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCccc
Q 047036 466 ITHVDVTYDG----------KWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKI 534 (634)
Q Consensus 466 ItsVdfSpDG----------k~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~F 534 (634)
|.+|+|+|++ .+|++ +.|++|+|||. .++....|.+|.+.. ..+.|
T Consensus 165 v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-----~~~~~~~~~~h~~~v------------------~~~~~ 221 (343)
T 2xzm_R 165 VSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-----NFQIRYTFKAHESNV------------------NHLSI 221 (343)
T ss_dssp EEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-----TTEEEEEEECCSSCE------------------EEEEE
T ss_pred eeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-----CCceeEEEcCccccc------------------eEEEE
Confidence 9999999998 78998 99999999994 355556666665310 12444
Q ss_pred ccccccccccCCCCceEEEE-EcCCeEEEEeCh
Q 047036 535 HGGHFSWVTENGKQERHLVA-TVGKFSVIWDFQ 566 (634)
Q Consensus 535 t~a~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~ 566 (634)
+|. | ++|++ +.|+.|.+||+.
T Consensus 222 s~~--------g---~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 222 SPN--------G---KYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CTT--------S---SEEEEEETTCEEEEEESS
T ss_pred CCC--------C---CEEEEEcCCCeEEEEECC
Confidence 443 3 35554 779999999984
No 40
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.93 E-value=1.1e-23 Score=211.97 Aligned_cols=235 Identities=7% Similarity=-0.000 Sum_probs=171.7
Q ss_pred EEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCC
Q 047036 258 SLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAP 333 (634)
Q Consensus 258 ~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~ 333 (634)
..++.+ +|+.+++.| ..|.||........ ....+.+|. .+...+.+++++++|++++.| +
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~---~~~~~~~h~-------~~v~~~~~~~~~~~l~~~~~d------g 74 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWV---QVHELKEHN-------GQVTGVDWAPDSNRIVTCGTD------R 74 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEE---EEEEEECCS-------SCEEEEEEETTTTEEEEEETT------S
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEE---eeeeecCCC-------CcccEEEEeCCCCEEEEEcCC------C
Confidence 555666 677777655 57888886543211 233444542 233445555666778877765 6
Q ss_pred cEEEEeCCCCcEEEEE--eccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCc--eEEec-ccCCCC
Q 047036 334 GVQQLDIETGKIVTEW--KFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSG--IVQNM-VKGDSP 408 (634)
Q Consensus 334 TIrlWDleTGK~V~~l--kgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~--~Vq~l-~gh~s~ 408 (634)
+|++||+++++....+ .+|...| ..++|+|+ +..+++|+.|++|++||++.+.. ....+ .+|
T Consensus 75 ~i~vwd~~~~~~~~~~~~~~~~~~v--~~~~~~~~--------~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~--- 141 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPTLVILRINRAA--RCVRWAPN--------EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPI--- 141 (372)
T ss_dssp CEEEEEEETTEEEEEEECCCCSSCE--EEEEECTT--------SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTC---
T ss_pred eEEEEECCCCeeeeeEEeecCCCce--eEEEECCC--------CCEEEEEeCCCEEEEEEecCCCcceeeeeeeccc---
Confidence 8999999999876654 6788765 56699998 67999999999999999997653 11222 222
Q ss_pred ccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecc------------------ccccccccccCCCCCeEEE
Q 047036 409 VLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKT------------------SMRQAKTAFPGLGSPITHV 469 (634)
Q Consensus 409 V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~------------------t~r~akt~L~GH~d~ItsV 469 (634)
...+.+++++|++ +||+|+.||.|+|||+. .+ .....+.+|..+|++|
T Consensus 142 ------------~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~ 208 (372)
T 1k8k_C 142 ------------RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFG-ELMFESSSSCGWVHGV 208 (372)
T ss_dssp ------------CSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTT-CEEEECCCCSSCEEEE
T ss_pred ------------CCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchh-hheEecCCCCCeEEEE
Confidence 3357899999998 79999999999999953 33 3566788999999999
Q ss_pred EECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCC
Q 047036 470 DVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQ 548 (634)
Q Consensus 470 dfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~ 548 (634)
+|+|+|++|++ +.|++|++||+. +++.+..|.+|.... ..+.|+|. +
T Consensus 209 ~~~~~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~~~~~~v------------------~~~~~~~~--------~-- 256 (372)
T 1k8k_C 209 CFSANGSRVAWVSHDSTVCLADAD----KKMAVATLASETLPL------------------LAVTFITE--------S-- 256 (372)
T ss_dssp EECSSSSEEEEEETTTEEEEEEGG----GTTEEEEEECSSCCE------------------EEEEEEET--------T--
T ss_pred EECCCCCEEEEEeCCCEEEEEECC----CCceeEEEccCCCCe------------------EEEEEecC--------C--
Confidence 99999999999 899999999986 577777776664210 12344443 3
Q ss_pred ceEEEEEcCCeEEEEeChh
Q 047036 549 ERHLVATVGKFSVIWDFQQ 567 (634)
Q Consensus 549 E~~IvtStg~~viiWdl~~ 567 (634)
..|+++.++.|.+|++..
T Consensus 257 -~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 257 -SLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp -EEEEEETTSSCEEEEEET
T ss_pred -CEEEEEeCCeEEEEEccC
Confidence 578888999999999975
No 41
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=4.4e-24 Score=222.32 Aligned_cols=192 Identities=13% Similarity=0.054 Sum_probs=142.2
Q ss_pred eeEEeCCcceEEe-cCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEE
Q 047036 310 ALLMRGETNMMLM-SPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLC 388 (634)
Q Consensus 310 ~mL~~~D~~mlls-ss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIk 388 (634)
.+.+++|+++|+. +++. |++||+||+++++++.++. |...| ..++|+|| |.++++|+++ +++
T Consensus 138 ~v~fSpDg~~la~as~~~-----d~~i~iwd~~~~~~~~~~~-~~~~V--~~v~fspd--------g~~l~s~s~~-~~~ 200 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKV-----PAIMRIIDPSDLTEKFEIE-TRGEV--KDLHFSTD--------GKVVAYITGS-SLE 200 (365)
T ss_dssp EEEECTTSSCEEEEESCS-----SCEEEEEETTTTEEEEEEE-CSSCC--CEEEECTT--------SSEEEEECSS-CEE
T ss_pred EEEEcCCCCEEEEEECCC-----CCEEEEeECCCCcEEEEeC-CCCce--EEEEEccC--------CceEEeccce-eEE
Confidence 3455667776653 4433 3899999999999999997 55555 45699999 6789998855 567
Q ss_pred EEEcCCCCceEEe-cccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCC----cEEEEecccccc---ccccc
Q 047036 389 QWDMRDRSGIVQN-MVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDG----KIRLYSKTSMRQ---AKTAF 459 (634)
Q Consensus 389 lWD~R~~~~~Vq~-l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DG----tIRLWD~~t~r~---akt~L 459 (634)
+|+..++.++... +.+ +...+.+++|+|+| +|++++.|+ +|++||...... ....+
T Consensus 201 ~~~~~~~~~~~~~~~~~---------------~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~ 265 (365)
T 4h5i_A 201 VISTVTGSCIARKTDFD---------------KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQV 265 (365)
T ss_dssp EEETTTCCEEEEECCCC---------------TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEeccCcceeeeecCC---------------CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeee
Confidence 7777766543222 211 23357899999999 799999998 689999765321 12457
Q ss_pred cCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeee-cCCCCCCCCCceeEeecCCCccccCCCcccccc
Q 047036 460 PGLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGF-SGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGG 537 (634)
Q Consensus 460 ~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF-~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a 537 (634)
.+|..+|++|+|||||++||+ +.|++|+|||+. +|+++..| .+|.+.. ..+.|+|+
T Consensus 266 ~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~----~~~~~~~~~~gH~~~V------------------~~v~fSpd 323 (365)
T 4h5i_A 266 TNRFKGITSMDVDMKGELAVLASNDNSIALVKLK----DLSMSKIFKQAHSFAI------------------TEVTISPD 323 (365)
T ss_dssp ESSCSCEEEEEECTTSCEEEEEETTSCEEEEETT----TTEEEEEETTSSSSCE------------------EEEEECTT
T ss_pred cCCCCCeEeEEECCCCCceEEEcCCCEEEEEECC----CCcEEEEecCcccCCE------------------EEEEECCC
Confidence 899999999999999999999 999999999986 68877765 5776411 23566665
Q ss_pred cccccccCCCCceEEEE-EcCCeEEEEeCh
Q 047036 538 HFSWVTENGKQERHLVA-TVGKFSVIWDFQ 566 (634)
Q Consensus 538 ~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~ 566 (634)
| ++|++ |.|+.|.||++.
T Consensus 324 --------g---~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 324 --------S---TYVASVSAANTIHIIKLP 342 (365)
T ss_dssp --------S---CEEEEEETTSEEEEEECC
T ss_pred --------C---CEEEEEeCCCeEEEEEcC
Confidence 4 46655 789999999995
No 42
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.93 E-value=5.5e-24 Score=218.38 Aligned_cols=193 Identities=10% Similarity=0.077 Sum_probs=145.5
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEE---EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeE
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTE---WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRL 387 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~---lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tI 387 (634)
+.+++++++|++++.| ++|++||+++++.+.. ..+|...| ..++|+|+ +.+|++|+.|++|
T Consensus 22 l~~sp~g~~las~~~D------~~i~iw~~~~~~~~~~~~~~~~h~~~v--~~~~~sp~--------g~~l~s~s~D~~v 85 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGD------RRIRIWGTEGDSWICKSVLSEGHQRTV--RKVAWSPC--------GNYLASASFDATT 85 (345)
T ss_dssp EEECTTSSCEEEEETT------SCEEEEEEETTEEEEEEEECSSCSSCE--EEEEECTT--------SSEEEEEETTSCE
T ss_pred EEECCCCCEEEEEcCC------CeEEEEEcCCCcceeeeeeccccCCcE--EEEEECCC--------CCEEEEEECCCcE
Confidence 3344455667777765 7999999999875433 36899986 46699998 6799999999999
Q ss_pred EEEEcCCCC-ceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccc--cccccccCCC
Q 047036 388 CQWDMRDRS-GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMR--QAKTAFPGLG 463 (634)
Q Consensus 388 klWD~R~~~-~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r--~akt~L~GH~ 463 (634)
++||++.+. ..+..+.+|..+ +.+++++|+| +||+||.||+|+|||+.+.. .....+.+|.
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~---------------v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~ 150 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENE---------------VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHT 150 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSC---------------EEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCC
T ss_pred EEEEccCCCeEEEEEccCCCCC---------------ceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcC
Confidence 999998754 345667666543 5789999999 89999999999999987542 2345788999
Q ss_pred CCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCC--eeeeecCCCCCCCCCceeEeecCCCccccCCCccccccccc
Q 047036 464 SPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGK--TKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFS 540 (634)
Q Consensus 464 d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~--~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs 540 (634)
.+|++|+|+|+|++|++ +.|++|+|||+. .++ +...+.+|.+.. ..+.|+|.
T Consensus 151 ~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~----~~~~~~~~~~~~h~~~v------------------~~l~~sp~--- 205 (345)
T 3fm0_A 151 QDVKHVVWHPSQELLASASYDDTVKLYREE----EDDWVCCATLEGHESTV------------------WSLAFDPS--- 205 (345)
T ss_dssp SCEEEEEECSSSSCEEEEETTSCEEEEEEE----TTEEEEEEEECCCSSCE------------------EEEEECTT---
T ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEec----CCCEEEEEEecCCCCce------------------EEEEECCC---
Confidence 99999999999999999 999999999975 232 344566665311 13455544
Q ss_pred ccccCCCCceEEEEEcCCeEEEEeCh
Q 047036 541 WVTENGKQERHLVATVGKFSVIWDFQ 566 (634)
Q Consensus 541 ~~t~~g~~E~~IvtStg~~viiWdl~ 566 (634)
| ...++++.|+.|.||++.
T Consensus 206 -----g--~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 206 -----G--QRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp -----S--SEEEEEETTSCEEEEEEE
T ss_pred -----C--CEEEEEeCCCeEEEeccc
Confidence 3 234455789999999963
No 43
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=4.9e-25 Score=224.29 Aligned_cols=239 Identities=10% Similarity=0.041 Sum_probs=153.5
Q ss_pred cccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCC--cEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEE
Q 047036 301 IGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETG--KIVTEWKFEKDGTDITMRDITNDTKSSQLDPSEST 378 (634)
Q Consensus 301 ~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTG--K~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~l 378 (634)
...+|+|+ +++|++++.| ++|++||+.++ +++.++.+|...| ..++|+|+ +++|
T Consensus 15 ~~~~~s~~--------g~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~h~~~v--~~~~~s~~--------~~~l 70 (377)
T 3dwl_C 15 YEHAFNSQ--------RTEFVTTTAT------NQVELYEQDGNGWKHARTFSDHDKIV--TCVDWAPK--------SNRI 70 (377)
T ss_dssp SCCEECSS--------SSEEECCCSS------SCBCEEEEETTEEEECCCBCCCSSCE--EEEEECTT--------TCCE
T ss_pred EEEEECCC--------CCEEEEecCC------CEEEEEEccCCceEEEEEEecCCceE--EEEEEeCC--------CCEE
Confidence 55556655 4566666654 79999999999 8999999999986 46699998 6789
Q ss_pred EEEeCCCeEEEEEcCCCC--ceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccc-
Q 047036 379 FLGLDDNRLCQWDMRDRS--GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQ- 454 (634)
Q Consensus 379 aSGS~D~tIklWD~R~~~--~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~- 454 (634)
++|+.|++|++||++.+. ..+..+.+|. ..+.+++++|+| +||+|+.||+|+|||+.+.+.
T Consensus 71 ~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 135 (377)
T 3dwl_C 71 VTCSQDRNAYVYEKRPDGTWKQTLVLLRLN---------------RAATFVRWSPNEDKFAVGSGARVISVCYFEQENDW 135 (377)
T ss_dssp EEEETTSSEEEC------CCCCEEECCCCS---------------SCEEEEECCTTSSCCEEEESSSCEEECCC-----C
T ss_pred EEEeCCCeEEEEEcCCCCceeeeeEecccC---------------CceEEEEECCCCCEEEEEecCCeEEEEEECCcccc
Confidence 999999999999998764 1234444443 346899999998 799999999999999887531
Q ss_pred -ccccccC-CCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCC
Q 047036 455 -AKTAFPG-LGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTD 531 (634)
Q Consensus 455 -akt~L~G-H~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~ 531 (634)
....+.+ |..+|++|+|+|||++|++ +.|++|+|||+........... ...+...+...+++.. .|... ...
T Consensus 136 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~-v~~ 210 (377)
T 3dwl_C 136 WVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEA---SVWGSRLPFNTVCAEY-PSGGW-VHA 210 (377)
T ss_dssp CCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCS---CSSCSCCCEEEEEECC-CCSSS-EEE
T ss_pred eeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccc---cccccccchhhhhhcc-cCCce-EEE
Confidence 3456777 9999999999999999999 8999999999863221111100 0011111112222222 22110 012
Q ss_pred cccccccccccccCCCCceEEEEEcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeeccccC
Q 047036 532 NKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHD 605 (634)
Q Consensus 532 i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~~d 605 (634)
+.|+|. | ...++++.|+.|.+||+..- .... ...+.+..+...|..+.|..+
T Consensus 211 ~~~sp~--------~--~~l~~~~~d~~i~iwd~~~~---~~~~---------~~~~~~~~~~~~v~~~~~s~~ 262 (377)
T 3dwl_C 211 VGFSPS--------G--NALAYAGHDSSVTIAYPSAP---EQPP---------RALITVKLSQLPLRSLLWANE 262 (377)
T ss_dssp EEECTT--------S--SCEEEEETTTEEC-CEECST---TSCE---------EECCCEECSSSCEEEEEEEET
T ss_pred EEECCC--------C--CEEEEEeCCCcEEEEECCCC---CCcc---------eeeEeecCCCCceEEEEEcCC
Confidence 334433 3 24455578999999998742 2100 012457778888888888444
No 44
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.92 E-value=2.5e-23 Score=215.60 Aligned_cols=267 Identities=11% Similarity=0.088 Sum_probs=165.5
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCce-------ecceeEEEecCCCCC----cccc-cCcceeeEEeCCc--c
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGI-------HNKGVSVRFDGGSSK----IGSN-STPKKALLMRGET--N 318 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl-------~~~~~~~~~~~~~~~----~g~~-fsP~~~mL~~~D~--~ 318 (634)
.+.++.+ +|+.+++.| ..|.||....... .+. ....+.+|.+. .... -.+...+.+.+++ .
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~ 108 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYN-VYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAA 108 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEE-EEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSS
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCccccccee-EecccccccccccccccccccCceEEEEEcCCCCcc
Confidence 4677777 777777765 4788888654320 110 13345555200 0000 0122333344444 5
Q ss_pred eEEecCCCCCCCCCCcEEEEeCCCCcEE---------------------------------------EE-EeccCCCcce
Q 047036 319 MMLMSPLKDGKPQAPGVQQLDIETGKIV---------------------------------------TE-WKFEKDGTDI 358 (634)
Q Consensus 319 mllsss~d~~~~~~~TIrlWDleTGK~V---------------------------------------~~-lkgH~~~V~I 358 (634)
+|++++.| ++|++||+.+++.. +. +.+|...|
T Consensus 109 ~l~s~s~d------~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-- 180 (447)
T 3dw8_B 109 QFLLSTND------KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI-- 180 (447)
T ss_dssp EEEEEECS------SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC--
T ss_pred eEEEeCCC------CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce--
Confidence 67777665 79999999886653 23 37899987
Q ss_pred eEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC--eEE
Q 047036 359 TMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG--SIV 436 (634)
Q Consensus 359 ~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG--~IA 436 (634)
..++|+|+ +..+++| .|++|++||++..+..++.+..... ....+...+.+++++|+| .||
T Consensus 181 ~~~~~~~~--------~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~--------~~~~~~~~v~~~~~~p~~~~~l~ 243 (447)
T 3dw8_B 181 NSISINSD--------YETYLSA-DDLRINLWHLEITDRSFNIVDIKPA--------NMEELTEVITAAEFHPNSCNTFV 243 (447)
T ss_dssp CEEEECTT--------SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCS--------SGGGCCCCEEEEEECSSCTTEEE
T ss_pred EEEEEcCC--------CCEEEEe-CCCeEEEEECCCCCceeeeeecccc--------cccccCcceEEEEECCCCCcEEE
Confidence 45699998 6789999 8999999999854433442210000 000123457899999987 699
Q ss_pred EEECCCcEEEEeccccccc----cccccCCCC------------CeEEEEECCCCCEEEEEcCCcEEEEEcccccCCCCe
Q 047036 437 VGSLDGKIRLYSKTSMRQA----KTAFPGLGS------------PITHVDVTYDGKWILGTTDTYLILICTLFSDKDGKT 500 (634)
Q Consensus 437 SGS~DGtIRLWD~~t~r~a----kt~L~GH~d------------~ItsVdfSpDGk~LlSS~D~tIrLWD~~~~~~~G~~ 500 (634)
+|+.||+|+|||+.+++ . ...+.+|.+ +|++|+|+|||++|+++.+++|+|||+.. .++.
T Consensus 244 s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~---~~~~ 319 (447)
T 3dw8_B 244 YSSSKGTIRLCDMRASA-LCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNM---ENRP 319 (447)
T ss_dssp EEETTSCEEEEETTTCS-SSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTC---CSSC
T ss_pred EEeCCCeEEEEECcCCc-cccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCC---Cccc
Confidence 99999999999998754 3 467888886 99999999999999994449999999862 3777
Q ss_pred eeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEE-EcCCeEEEEeChh
Q 047036 501 KTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVA-TVGKFSVIWDFQQ 567 (634)
Q Consensus 501 ~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~~ 567 (634)
+..|.+|..-. .++..+...+... ......|++. | ..|++ +.|+.|.+||+..
T Consensus 320 ~~~~~~~~~~~---~~l~~~~~~~~i~-----~~~~~~~s~~---~---~~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 320 VETYQVHEYLR---SKLCSLYENDCIF-----DKFECCWNGS---D---SVVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp SCCEESCGGGT---TTHHHHHHTSGGG-----CCCCEEECTT---S---SEEEEECSTTEEEEEETTT
T ss_pred cceeecccccc---ccccccccccccc-----cceEEEECCC---C---CEEEEeccCCEEEEEEcCC
Confidence 77787775311 0000000000000 0112345431 3 34544 7799999999974
No 45
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.3e-24 Score=240.43 Aligned_cols=243 Identities=9% Similarity=-0.005 Sum_probs=167.5
Q ss_pred CcEEEeee-C--------CCeEEEec---CeeeEEEccCCceecceeEEEecCC-CCCcccccCcceeeEEeCCcceEEe
Q 047036 256 VQSLTLGA-L--------DNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGG-SSKIGSNSTPKKALLMRGETNMMLM 322 (634)
Q Consensus 256 ~~~LavG~-~--------D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~-~~~~g~~fsP~~~mL~~~D~~mlls 322 (634)
.+.||+|. . +.++++.| .+|.+|....+.+... ....+.+| ..+.+++|+|... .+++..+|++
T Consensus 154 ~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~-~~~~l~~~~~~V~~v~wsp~~~--~~~~~~~LAs 230 (524)
T 2j04_B 154 IQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCV-KVQTIVHSFGEVWDLKWHEGCH--APHLVGCLSF 230 (524)
T ss_dssp EEEEEEEEEC------------------CEEEEEEEEETTTCCEE-EEEEEEECCCSEEEEEECSSCC--CSSSSCEEEE
T ss_pred CeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCce-EEEEEEecCCcEEEEEECCCCC--CCCCCceEEE
Confidence 36777776 2 23345544 4788888655432211 11123333 2346677888631 1234567777
Q ss_pred cCCCCCCCCCCcEEEEeCCCCcE-----------EEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEE
Q 047036 323 SPLKDGKPQAPGVQQLDIETGKI-----------VTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWD 391 (634)
Q Consensus 323 ss~d~~~~~~~TIrlWDleTGK~-----------V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD 391 (634)
++.| ++|++||+.+++. +.++.+|...| ..++|+|+ ..|++|+.|++|++||
T Consensus 231 ~s~D------gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v--~sv~~s~~---------~~lasgs~DgtV~lWD 293 (524)
T 2j04_B 231 VSQE------GTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLI--TTFDFLSP---------TTVVCGFKNGFVAEFD 293 (524)
T ss_dssp EETT------SCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCE--EEEEESSS---------SEEEEEETTSEEEEEE
T ss_pred EecC------CeEEEEEcCCCccccccceeecCceEEEEcCCCCE--EEEEecCC---------CeEEEEeCCCEEEEEE
Confidence 7765 7999999988752 24789999876 46699875 4899999999999999
Q ss_pred cCCCCceEEecccCCCCccccccccccccCcceEEE--EECCCC--eEEEEECCCcEEEEeccccccccccccCCCC--C
Q 047036 392 MRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCF--ASTGDG--SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGS--P 465 (634)
Q Consensus 392 ~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssv--a~s~dG--~IASGS~DGtIRLWD~~t~r~akt~L~GH~d--~ 465 (634)
++++.+++..+.+|..+ +.++ +++++| .|||||.||+|||||+++++ +..++.+|.. .
T Consensus 294 ~~~~~~~~~~~~~H~~~---------------V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~-~~~~~~~~~~~~~ 357 (524)
T 2j04_B 294 LTDPEVPSFYDQVHDSY---------------ILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA-TTKTTVSRFRGSN 357 (524)
T ss_dssp TTBCSSCSEEEECSSSC---------------EEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH-HHCEEEEECSCCS
T ss_pred CCCCCCceEEeeccccc---------------EEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC-cccccccccccCc
Confidence 99765545566666654 4566 578876 68999999999999998764 5556777764 5
Q ss_pred eEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCccccccccccccc
Q 047036 466 ITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTE 544 (634)
Q Consensus 466 ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~ 544 (634)
|++|+|||||+.||+ +.|++|+|||++ .+.++..|.+|.+.. ..+.|+|.
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~----~~~~~~~l~gH~~~V------------------~sva~Sp~------- 408 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSR----AAFAVHPLVSRETTI------------------TAIGVSRL------- 408 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETT----CTTCCEEEEECSSCE------------------EEEECCSS-------
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECc----ccccceeeecCCCce------------------EEEEeCCC-------
Confidence 899999999999998 789999999986 577777788876421 23555554
Q ss_pred CCCCceEEEEEcCCeEEEEeCh
Q 047036 545 NGKQERHLVATVGKFSVIWDFQ 566 (634)
Q Consensus 545 ~g~~E~~IvtStg~~viiWdl~ 566 (634)
| ...+++|.|+.|.+||+.
T Consensus 409 -g--~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 409 -H--PMVLAGSADGSLIITNAA 427 (524)
T ss_dssp -C--CBCEEEETTTEEECCBSC
T ss_pred -C--CeEEEEECCCEEEEEech
Confidence 3 234455789999999974
No 46
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=7.5e-23 Score=204.31 Aligned_cols=273 Identities=10% Similarity=0.048 Sum_probs=177.8
Q ss_pred CcEEEeee-CC-----CeEEEec--CeeeEEEccCCceecceeEEEecCC------CCCcccccCcceeeEEeCCcceEE
Q 047036 256 VQSLTLGA-LD-----NSFLVSD--LGLQVYRNYNRGIHNKGVSVRFDGG------SSKIGSNSTPKKALLMRGETNMML 321 (634)
Q Consensus 256 ~~~LavG~-~D-----~sfvv~G--~~igV~k~~~~gl~~~~~~~~~~~~------~~~~g~~fsP~~~mL~~~D~~mll 321 (634)
....++.+ ++ ..+++.+ ..|.||....++. ...+..+ ..+...+|+|+. ..++.+|+
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~l~ 89 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGE-----IRLLQSYVDADADENFYTCAWTYDS----NTSHPLLA 89 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGC-----EEEEEEEECSCTTCCEEEEEEEECT----TTCCEEEE
T ss_pred CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcE-----EEeeeeccccCCCCcEEEEEeccCC----CCCCCEEE
Confidence 34677777 42 2344432 5789998765431 1122211 112444455542 11245677
Q ss_pred ecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEec-CCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEE
Q 047036 322 MSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITN-DTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQ 400 (634)
Q Consensus 322 sss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsP-d~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq 400 (634)
+++.| ++|++||+.+++++..+.+|...| ..++|+| + +.++++|+.|++|++||++.+.. +.
T Consensus 90 ~~~~d------g~i~v~d~~~~~~~~~~~~~~~~i--~~~~~~~~~--------~~~l~s~~~dg~i~iwd~~~~~~-~~ 152 (366)
T 3k26_A 90 VAGSR------GIIRIINPITMQCIKHYVGHGNAI--NELKFHPRD--------PNLLLSVSKDHALRLWNIQTDTL-VA 152 (366)
T ss_dssp EEETT------CEEEEECTTTCCEEEEEESCCSCE--EEEEECSSC--------TTEEEEEETTSCEEEEETTTTEE-EE
T ss_pred EecCC------CEEEEEEchhceEeeeecCCCCcE--EEEEECCCC--------CCEEEEEeCCCeEEEEEeecCeE-EE
Confidence 77765 799999999999999999999976 4669999 6 67999999999999999998643 44
Q ss_pred ec---ccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccccccccc----------------
Q 047036 401 NM---VKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFP---------------- 460 (634)
Q Consensus 401 ~l---~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~---------------- 460 (634)
.+ .+|. ..+.+++++|+| +|++|+.||.|++||+.+++ ....+.
T Consensus 153 ~~~~~~~~~---------------~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 216 (366)
T 3k26_A 153 IFGGVEGHR---------------DEVLSADYDLLGEKIMSCGMDHSLKLWRINSKR-MMNAIKESYDYNPNKTNRPFIS 216 (366)
T ss_dssp EECSTTSCS---------------SCEEEEEECTTSSEEEEEETTSCEEEEESCSHH-HHHHHHHHHTCCGGGCSSCCCC
T ss_pred Eeccccccc---------------CceeEEEECCCCCEEEEecCCCCEEEEECCCCc-cccccceeEEecCCCCcccccc
Confidence 54 2332 346899999998 89999999999999998753 333333
Q ss_pred ------------CCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCee-eeecCCCCCCCCCceeEeecCCCcc
Q 047036 461 ------------GLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTK-TGFSGRMGNKIPAPRLLKLTPLDSH 526 (634)
Q Consensus 461 ------------GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~-~gF~gh~~~~~p~pr~L~L~Pe~~~ 526 (634)
+|..+|++|+|+ |++|++ +.|++|++||+.. ++.. ..+..+ ....+.+...+.|..
T Consensus 217 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~----~~~~~~~~~~~----~~~~~~~~~~~~~~~ 286 (366)
T 3k26_A 217 QKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGK----MEDDIDKIKPS----ESNVTILGRFDYSQC 286 (366)
T ss_dssp EEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESS----TTCCGGGCCTT----CCCEEEEEEEECSSC
T ss_pred eeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCC----ccccccccccC----CcchheeccccccCC
Confidence 399999999999 789998 8899999999862 3221 111111 122233443333321
Q ss_pred ccCCCcccccccccccccCCCCceEEEE-EcCCeEEEEeChhhhcccccccccccCCcceeeEEEecc--CCCeeeecc
Q 047036 527 LAGTDNKIHGGHFSWVTENGKQERHLVA-TVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLK--DESIVESRF 602 (634)
Q Consensus 527 ~~g~~i~Ft~a~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~--~~~i~~~~f 602 (634)
. ...+.|+|.. +.+.|++ +.++.|.+||+..-.... ...+.+..+ ...|..+.|
T Consensus 287 ~-v~~~~~s~~~---------~~~~l~~~~~dg~i~vwd~~~~~~~~------------~~~~~~~~~~~~~~v~~~~~ 343 (366)
T 3k26_A 287 D-IWYMRFSMDF---------WQKMLALGNQVGKLYVWDLEVEDPHK------------AKCTTLTHHKCGAAIRQTSF 343 (366)
T ss_dssp C-SSCCCCEECT---------TSSEEEEECTTSCEEEEECCSSSGGG------------CEEEEECCTTCCSCEEEEEE
T ss_pred c-EEEEEEcCCC---------CCcEEEEEecCCcEEEEECCCCCCcc------------ccceEEcccccCCceEEEEe
Confidence 1 1234444431 1245554 678999999997422111 123456666 688888887
No 47
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=1.2e-22 Score=209.28 Aligned_cols=270 Identities=10% Similarity=0.039 Sum_probs=174.5
Q ss_pred CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeC
Q 047036 264 LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDI 340 (634)
Q Consensus 264 ~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDl 340 (634)
+|+.+++.| ..|.||...... ....+.+|. .+...+.+++++++|++++.| ++|++||+
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~h~-------~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~ 168 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFNL-----QREIDQAHV-------SEITKLKFFPSGEALISSSQD------MQLKIWSV 168 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSCE-----EEEETTSSS-------SCEEEEEECTTSSEEEEEETT------SEEEEEET
T ss_pred cCCCEEEEEECCCCEEEEeCCCcc-----eeeeccccc-------CccEEEEECCCCCEEEEEeCC------CeEEEEeC
Confidence 555555543 367777654321 122233442 233344445556677777765 79999999
Q ss_pred CCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCC---Cccccc--cc
Q 047036 341 ETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDS---PVLHWT--QG 415 (634)
Q Consensus 341 eTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s---~V~~~~--~g 415 (634)
.+|++++++.+|...| ..++|+|+ +..+++|+.|++|++||++++. .+..+..|.. .|.... .+
T Consensus 169 ~~~~~~~~~~~h~~~v--~~~~~~~~--------~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~ 237 (420)
T 3vl1_A 169 KDGSNPRTLIGHRATV--TDIAIIDR--------GRNVLSASLDGTIRLWECGTGT-TIHTFNRKENPHDGVNSIALFVG 237 (420)
T ss_dssp TTCCCCEEEECCSSCE--EEEEEETT--------TTEEEEEETTSCEEEEETTTTE-EEEEECBTTBTTCCEEEEEEEEC
T ss_pred CCCcCceEEcCCCCcE--EEEEEcCC--------CCEEEEEcCCCcEEEeECCCCc-eeEEeecCCCCCCCccEEEEecC
Confidence 9999999999999986 46699998 6799999999999999999865 4566654321 111000 00
Q ss_pred c----ccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCC-EEEE-EcCCcEEE
Q 047036 416 H----QFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGK-WILG-TTDTYLIL 488 (634)
Q Consensus 416 ~----~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk-~LlS-S~D~tIrL 488 (634)
. .......+.+++++|+| +||+|+.||.|+|||+.+++.......+|..+|++|+|+|+|+ +|++ +.|++|+|
T Consensus 238 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~v 317 (420)
T 3vl1_A 238 TDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQ 317 (420)
T ss_dssp CCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred CcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEE
Confidence 0 00012344566778999 7999999999999999876534444567999999999999999 8988 89999999
Q ss_pred EEcccccCCCC-eeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEE-EcCCeEEEEeCh
Q 047036 489 ICTLFSDKDGK-TKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVA-TVGKFSVIWDFQ 566 (634)
Q Consensus 489 WD~~~~~~~G~-~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~ 566 (634)
||+. +++ .+..+.+|.+. .+. ...|.. + ..|++ +.|+.|.+|++.
T Consensus 318 wd~~----~~~~~~~~~~~~~~~--------------------~v~--~~~~~~----~---~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 318 WDLR----SPECPVGEFLINEGT--------------------PIN--NVYFAA----G---ALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp EETT----CTTSCSEEEEESTTS--------------------CEE--EEEEET----T---EEEEEETTTEEEEEEEEC
T ss_pred EEcC----CCcCchhhhhccCCC--------------------Cce--EEEeCC----C---CEEEEecCCccEEEEecc
Confidence 9986 332 23444443210 111 111211 2 35555 668999999987
Q ss_pred hhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 567 QVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 567 ~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
.-.+.... .....+..+..+...|.+..|
T Consensus 365 ~~~~~~~~-------~~~~~~~~~~~~~~~v~~~~~ 393 (420)
T 3vl1_A 365 DPESERPA-------IEFETPTFLVSNDDAVSQFCY 393 (420)
T ss_dssp CTTCCSCE-------ECTTSCEEECCSSCCCCEEEE
T ss_pred CCCCCccc-------eeccCccEEccCCcceEEEEE
Confidence 52221100 000112346778888887777
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=1.2e-23 Score=216.57 Aligned_cols=212 Identities=11% Similarity=0.056 Sum_probs=157.4
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEE
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQW 390 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklW 390 (634)
+.+++++++|++++.| ++|++||+.+++.+..+.+|. + +.+..|+|+ +..+++|+.|++|++|
T Consensus 62 ~~~s~~g~~l~~~~~d------~~v~i~d~~~~~~~~~~~~~~--~-~~~~~~~~~--------~~~l~~~~~dg~i~iw 124 (420)
T 3vl1_A 62 NTFEKVGSHLYKARLD------GHDFLFNTIIRDGSKMLKRAD--Y-TAVDTAKLQ--------MRRFILGTTEGDIKVL 124 (420)
T ss_dssp CEEEEEETTEEEEEET------TEEEEEECCSEETTTTSCSCC--E-EEEEEECSS--------SCEEEEEETTSCEEEE
T ss_pred eeeeecCCeEEEEEcC------CcEEEEEecccceeeEEecCC--c-eEEEEEecC--------CCEEEEEECCCCEEEE
Confidence 3344445666777665 699999999998888888883 2 356678888 6799999999999999
Q ss_pred EcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEE
Q 047036 391 DMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHV 469 (634)
Q Consensus 391 D~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsV 469 (634)
|++.+. +++.+.+|.. .+.+++++|+| +||+|+.||+|+|||+.+++ ....+.+|..+|++|
T Consensus 125 d~~~~~-~~~~~~~h~~---------------~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~h~~~v~~~ 187 (420)
T 3vl1_A 125 DSNFNL-QREIDQAHVS---------------EITKLKFFPSGEALISSSQDMQLKIWSVKDGS-NPRTLIGHRATVTDI 187 (420)
T ss_dssp CTTSCE-EEEETTSSSS---------------CEEEEEECTTSSEEEEEETTSEEEEEETTTCC-CCEEEECCSSCEEEE
T ss_pred eCCCcc-eeeecccccC---------------ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-CceEEcCCCCcEEEE
Confidence 998754 4556655544 36899999998 79999999999999998864 677889999999999
Q ss_pred EECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCcccc--CCCcccccccccccccCC
Q 047036 470 DVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLA--GTDNKIHGGHFSWVTENG 546 (634)
Q Consensus 470 dfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~--g~~i~Ft~a~Fs~~t~~g 546 (634)
+|+|||++|++ +.|++|+|||+. +++.+..|.+|.+.. .....+.+.|.+.... ......+...|++. |
T Consensus 188 ~~~~~~~~l~s~~~d~~v~iwd~~----~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~ 259 (420)
T 3vl1_A 188 AIIDRGRNVLSASLDGTIRLWECG----TGTTIHTFNRKENPH-DGVNSIALFVGTDRQLHEISTSKKNNLEFGTY---G 259 (420)
T ss_dssp EEETTTTEEEEEETTSCEEEEETT----TTEEEEEECBTTBTT-CCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT---T
T ss_pred EEcCCCCEEEEEcCCCcEEEeECC----CCceeEEeecCCCCC-CCccEEEEecCCcceeeecccCcccceEEcCC---C
Confidence 99999999999 899999999986 688888888765422 2234555555432110 01112233445431 3
Q ss_pred CCceEEE-EEcCCeEEEEeChh
Q 047036 547 KQERHLV-ATVGKFSVIWDFQQ 567 (634)
Q Consensus 547 ~~E~~Iv-tStg~~viiWdl~~ 567 (634)
..|+ ++.++.|.+||+..
T Consensus 260 ---~~l~~~~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 260 ---KYVIAGHVSGVITVHNVFS 278 (420)
T ss_dssp ---EEEEEEETTSCEEEEETTT
T ss_pred ---CEEEEEcCCCeEEEEECCC
Confidence 4554 47799999999863
No 49
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.91 E-value=6e-22 Score=195.54 Aligned_cols=255 Identities=12% Similarity=0.149 Sum_probs=174.8
Q ss_pred cEEEeee-CCCeEEEec--CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD--LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAP 333 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G--~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~ 333 (634)
...++.+ +|+.+++.| ..|.||.....+...........+|. .+...+.+++++++|++++.+ +
T Consensus 53 ~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~d------~ 119 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRD-------NYIRSCKLLPDGCTLIVGGEA------S 119 (337)
T ss_dssp CCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTT-------SBEEEEEECTTSSEEEEEESS------S
T ss_pred ceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCC-------CcEEEEEEcCCCCEEEEEcCC------C
Confidence 4566666 777777754 58888987554321111111111221 233444455566777777665 6
Q ss_pred cEEEEeCCCCc--EEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 334 GVQQLDIETGK--IVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 334 TIrlWDleTGK--~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
+|++||+.+++ .+..+.+|...| ..++|+|+ +..+++|+.|++|++||++++. .+..+.+|..
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~~~~~i--~~~~~~~~--------~~~l~~~~~dg~v~~~d~~~~~-~~~~~~~~~~---- 184 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTSSAPAC--YALAISPD--------SKVCFSCCSDGNIAVWDLHNQT-LVRQFQGHTD---- 184 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSSSCE--EEEEECTT--------SSEEEEEETTSCEEEEETTTTE-EEEEECCCSS----
T ss_pred cEEEEECCCCCcceeeecccCCCce--EEEEECCC--------CCEEEEEeCCCcEEEEeCCCCc-eeeeeecccC----
Confidence 99999999988 778899999875 46699998 6799999999999999999764 4566654443
Q ss_pred cccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEE
Q 047036 412 WTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILI 489 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLW 489 (634)
.+.+++++|+| +|++|+.||.|++||+.+++ ....+ .|..+|.+++|+|+|++|++ +.|+.|++|
T Consensus 185 -----------~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~ 251 (337)
T 1gxr_A 185 -----------GASCIDISNDGTKLWTGGLDNTVRSWDLREGR-QLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVL 251 (337)
T ss_dssp -----------CEEEEEECTTSSEEEEEETTSEEEEEETTTTE-EEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred -----------ceEEEEECCCCCEEEEEecCCcEEEEECCCCc-eEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEE
Confidence 36789999998 89999999999999998764 44444 47889999999999999999 889999999
Q ss_pred EcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChhhh
Q 047036 490 CTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVK 569 (634)
Q Consensus 490 D~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~v~ 569 (634)
|+. .++ ...+.+|... ...+.|+|. + ...++++.++.|.+||+..
T Consensus 252 ~~~----~~~-~~~~~~~~~~------------------v~~~~~~~~--------~--~~l~~~~~dg~i~~~~~~~-- 296 (337)
T 1gxr_A 252 HVN----KPD-KYQLHLHESC------------------VLSLKFAYC--------G--KWFVSTGKDNLLNAWRTPY-- 296 (337)
T ss_dssp ETT----SSC-EEEECCCSSC------------------EEEEEECTT--------S--SEEEEEETTSEEEEEETTT--
T ss_pred ECC----CCC-eEEEcCCccc------------------eeEEEECCC--------C--CEEEEecCCCcEEEEECCC--
Confidence 975 222 2223333210 012344443 2 2344557799999999873
Q ss_pred cccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 570 NSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 570 ~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
++. .....+...|..+.|
T Consensus 297 -~~~--------------~~~~~~~~~v~~~~~ 314 (337)
T 1gxr_A 297 -GAS--------------IFQSKESSSVLSCDI 314 (337)
T ss_dssp -CCE--------------EEEEECSSCEEEEEE
T ss_pred -CeE--------------EEEecCCCcEEEEEE
Confidence 221 123446677777666
No 50
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.91 E-value=5.6e-22 Score=197.73 Aligned_cols=214 Identities=14% Similarity=0.164 Sum_probs=154.7
Q ss_pred CCcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCC
Q 047036 255 GVQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKP 330 (634)
Q Consensus 255 ~~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~ 330 (634)
...+.++.+ +|+.+++.| ..|.||...... ....+.+|. .+...+.+++++++|++++.|
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~-----~~~~~~~h~-------~~v~~~~~~~~~~~l~s~~~d---- 95 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE-----RLGTLDGHT-------GTIWSIDVDCFTKYCVTGSAD---- 95 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC-----EEEEECCCS-------SCEEEEEECTTSSEEEEEETT----
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch-----hhhhhhhcC-------CcEEEEEEcCCCCEEEEEeCC----
Confidence 345778888 788888765 478999865543 233455552 223344445556677777765
Q ss_pred CCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC-----CeEEEEEcCCCCceEEecc-c
Q 047036 331 QAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD-----NRLCQWDMRDRSGIVQNMV-K 404 (634)
Q Consensus 331 ~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D-----~tIklWD~R~~~~~Vq~l~-g 404 (634)
++|++||+.+|+++..+. |...| ..++|+|+ +..+++++.+ +.|++||++..... ..+. .
T Consensus 96 --g~i~iwd~~~~~~~~~~~-~~~~v--~~~~~~~~--------~~~l~~~~~~~~~~~g~i~~~d~~~~~~~-~~~~~~ 161 (369)
T 3zwl_B 96 --YSIKLWDVSNGQCVATWK-SPVPV--KRVEFSPC--------GNYFLAILDNVMKNPGSINIYEIERDSAT-HELTKV 161 (369)
T ss_dssp --TEEEEEETTTCCEEEEEE-CSSCE--EEEEECTT--------SSEEEEEECCBTTBCCEEEEEEEEECTTT-CCEEEE
T ss_pred --CeEEEEECCCCcEEEEee-cCCCe--EEEEEccC--------CCEEEEecCCccCCCCEEEEEEecCCccc-eeeccc
Confidence 799999999999999998 66654 56699998 6799999999 99999999875421 1111 0
Q ss_pred CCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-Ec
Q 047036 405 GDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TT 482 (634)
Q Consensus 405 h~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~ 482 (634)
....+.. ..++ .....+.+++++++| +||+|+.||.|++||+.+.......+.+|..+|++|+|+|||++|++ +.
T Consensus 162 ~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 238 (369)
T 3zwl_B 162 SEEPIHK-IITH--EGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR 238 (369)
T ss_dssp CSSCSEE-EECC--TTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred ccceeee-ccCC--cCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecC
Confidence 0011000 0000 011267899999998 79999999999999998732466788899999999999999999999 89
Q ss_pred CCcEEEEEcccccCCCCeeeeec
Q 047036 483 DTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 483 D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
|++|++||+. +++.+..|.
T Consensus 239 d~~i~v~d~~----~~~~~~~~~ 257 (369)
T 3zwl_B 239 DTNSFLVDVS----TLQVLKKYE 257 (369)
T ss_dssp TSEEEEEETT----TCCEEEEEE
T ss_pred CceEEEEECC----CCceeeeec
Confidence 9999999986 566665555
No 51
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.91 E-value=1.6e-22 Score=226.57 Aligned_cols=255 Identities=12% Similarity=0.119 Sum_probs=186.4
Q ss_pred CcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 256 VQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
..+.++++ +|+.+++.| ..|.||....+. ....+.+|. .|...+.+++++++|++++.|
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~-----~~~~~~~~~-------~~v~~~~~s~~~~~l~~~~~d----- 76 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV-----EVRSIQVTE-------TPVRAGKFIARKNWIIVGSDD----- 76 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-----EEEEEECCS-------SCEEEEEEEGGGTEEEEEETT-----
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCCCc-----eEEEEecCC-------CcEEEEEEeCCCCEEEEEeCC-----
Confidence 45777888 888888865 478899865532 233455542 234444555566777777765
Q ss_pred CCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 332 APGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
++|++||+.+|+.+.++.+|...| ..++|+|+ +..|++|+.|++|++||++.+...++.+.+|..
T Consensus 77 -g~i~vw~~~~~~~~~~~~~~~~~v--~~~~~s~~--------~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~---- 141 (814)
T 3mkq_A 77 -FRIRVFNYNTGEKVVDFEAHPDYI--RSIAVHPT--------KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH---- 141 (814)
T ss_dssp -SEEEEEETTTCCEEEEEECCSSCE--EEEEECSS--------SSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS----
T ss_pred -CeEEEEECCCCcEEEEEecCCCCE--EEEEEeCC--------CCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC----
Confidence 799999999999999999999976 46699998 678999999999999999986555666665543
Q ss_pred cccccccccCcceEEEEECC-CC-eEEEEECCCcEEEEeccccccccccccC-CCCCeEEEEECC--CCCEEEE-EcCCc
Q 047036 412 WTQGHQFSRGTNFQCFASTG-DG-SIVVGSLDGKIRLYSKTSMRQAKTAFPG-LGSPITHVDVTY--DGKWILG-TTDTY 485 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~-dG-~IASGS~DGtIRLWD~~t~r~akt~L~G-H~d~ItsVdfSp--DGk~LlS-S~D~t 485 (634)
.+.+++++| +| .|++|+.||+|++||+.+.+ ....+.. |..+|.+++|+| +|.+|++ +.|++
T Consensus 142 -----------~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~ 209 (814)
T 3mkq_A 142 -----------FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST-PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT 209 (814)
T ss_dssp -----------CEEEEEEETTEEEEEEEEETTSEEEEEETTCSS-CSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE
T ss_pred -----------cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-ceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE
Confidence 367899999 77 79999999999999987754 4455554 458999999999 9999999 88999
Q ss_pred EEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeC
Q 047036 486 LILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDF 565 (634)
Q Consensus 486 IrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl 565 (634)
|++||+. .++.+..+.+|.+.. ..+.|+|. | ...++++.++.|.+||+
T Consensus 210 i~~~d~~----~~~~~~~~~~~~~~v------------------~~~~~~~~--------~--~~l~~~~~dg~v~vwd~ 257 (814)
T 3mkq_A 210 IKIWDYQ----TKSCVATLEGHMSNV------------------SFAVFHPT--------L--PIIISGSEDGTLKIWNS 257 (814)
T ss_dssp EEEEETT----TTEEEEEEECCSSCE------------------EEEEECSS--------S--SEEEEEETTSCEEEEET
T ss_pred EEEEECC----CCcEEEEEcCCCCCE------------------EEEEEcCC--------C--CEEEEEeCCCeEEEEEC
Confidence 9999975 566777777665311 12334433 3 23444577899999998
Q ss_pred hhhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 566 QQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 566 ~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
.. ++. ...+..+.+.|..+.|
T Consensus 258 ~~---~~~-------------~~~~~~~~~~v~~~~~ 278 (814)
T 3mkq_A 258 ST---YKV-------------EKTLNVGLERSWCIAT 278 (814)
T ss_dssp TT---CSE-------------EEEECCSSSSEEEEEE
T ss_pred CC---CcE-------------EEEeecCCCcEEEEEE
Confidence 73 222 1345556666666666
No 52
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.91 E-value=5e-23 Score=201.66 Aligned_cols=154 Identities=10% Similarity=0.133 Sum_probs=121.5
Q ss_pred eeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCC----cEEEEEeccCCCcceeEEEEec--CCCCCCCCCCCEEEEEe
Q 047036 309 KALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETG----KIVTEWKFEKDGTDITMRDITN--DTKSSQLDPSESTFLGL 382 (634)
Q Consensus 309 ~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTG----K~V~~lkgH~~~V~I~vvsfsP--d~K~~q~~~g~~laSGS 382 (634)
..+.++.++++|++++.| ++|++||+.++ +++..+.+|...| ..++|+| + +.+|++|+
T Consensus 15 ~~~~~~~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~d--------~~~l~s~~ 78 (351)
T 3f3f_A 15 HDVVYDFYGRHVATCSSD------QHIKVFKLDKDTSNWELSDSWRAHDSSI--VAIDWASPEY--------GRIIASAS 78 (351)
T ss_dssp EEEEECSSSSEEEEEETT------SEEEEEEECSSSCCEEEEEEEECCSSCE--EEEEECCGGG--------CSEEEEEE
T ss_pred eEEEEcCCCCEEEEeeCC------CeEEEEECCCCCCcceecceeccCCCcE--EEEEEcCCCC--------CCEEEEEc
Confidence 334444455667777765 79999999987 6889999999986 4669998 4 57999999
Q ss_pred CCCeEEEEEcCCCC--------ceEEecccCCCCccccccccccccCcceEEEEECCC--C-eEEEEECCCcEEEEeccc
Q 047036 383 DDNRLCQWDMRDRS--------GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD--G-SIVVGSLDGKIRLYSKTS 451 (634)
Q Consensus 383 ~D~tIklWD~R~~~--------~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d--G-~IASGS~DGtIRLWD~~t 451 (634)
.|++|++||++.+. ..+..+.+|. ..+.+++++|+ + +||+|+.||.|+|||+.+
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 143 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSK---------------GSLYSVKFAPAHLGLKLACLGNDGILRLYDALE 143 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCCS---------------SCEEEEEECCGGGCSEEEEEETTCEEEEEECSS
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecccC---------------CceeEEEEcCCCCCcEEEEecCCCcEEEecCCC
Confidence 99999999998753 2244444443 34688999998 7 799999999999999765
Q ss_pred ccc-----------------------------------------------------------ccccccCCCCCeEEEEEC
Q 047036 452 MRQ-----------------------------------------------------------AKTAFPGLGSPITHVDVT 472 (634)
Q Consensus 452 ~r~-----------------------------------------------------------akt~L~GH~d~ItsVdfS 472 (634)
++. ....+++|..+|++|+|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~ 223 (351)
T 3f3f_A 144 PSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWA 223 (351)
T ss_dssp TTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEEC
T ss_pred hHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEEC
Confidence 321 134567899999999999
Q ss_pred CCC----CEEEE-EcCCcEEEEEccc
Q 047036 473 YDG----KWILG-TTDTYLILICTLF 493 (634)
Q Consensus 473 pDG----k~LlS-S~D~tIrLWD~~~ 493 (634)
|+| ++|++ +.|++|+|||+..
T Consensus 224 p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 224 PSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp CCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred CCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 999 88998 8999999999863
No 53
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.1e-22 Score=207.47 Aligned_cols=134 Identities=16% Similarity=0.157 Sum_probs=107.8
Q ss_pred CcEEEE---------eCCCCcEEEEEe-ccCCCcceeEEEEec--CCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEE
Q 047036 333 PGVQQL---------DIETGKIVTEWK-FEKDGTDITMRDITN--DTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQ 400 (634)
Q Consensus 333 ~TIrlW---------DleTGK~V~~lk-gH~~~V~I~vvsfsP--d~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq 400 (634)
++|++| |+.++++++.+. +|.+.| ..++|+| + +.++++|+.|++|++||++++.. ++
T Consensus 95 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~--------~~~l~s~s~dg~i~~wd~~~~~~-~~ 163 (343)
T 3lrv_A 95 NRLLLLYPGNQITILDSKTNKVLREIEVDSANEI--IYMYGHNEVN--------TEYFIWADNRGTIGFQSYEDDSQ-YI 163 (343)
T ss_dssp TEEEEEETTTEEEEEETTTCCEEEEEECCCSSCE--EEEECCC-----------CCEEEEEETTCCEEEEESSSSCE-EE
T ss_pred CeEEEEEccCceEEeecCCcceeEEeecCCCCCE--EEEEcCCCCC--------CCEEEEEeCCCcEEEEECCCCcE-EE
Confidence 567666 566888888876 777765 4569999 7 67999999999999999998654 33
Q ss_pred ecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccccc-ccccC-CCCCeEEEEECCCCCE
Q 047036 401 NMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAK-TAFPG-LGSPITHVDVTYDGKW 477 (634)
Q Consensus 401 ~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~ak-t~L~G-H~d~ItsVdfSpDGk~ 477 (634)
.+..+ ....+.|++++|+| +||+|+.||+|||||+.+++ .. ..+.+ |..+|++|+|+|||++
T Consensus 164 ~~~~~--------------~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~-~~~~~~~~~h~~~v~~l~fs~~g~~ 228 (343)
T 3lrv_A 164 VHSAK--------------SDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD-QASSRFPVDEEAKIKEVKFADNGYW 228 (343)
T ss_dssp EECCC--------------SSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT-SCCEECCCCTTSCEEEEEECTTSSE
T ss_pred EEecC--------------CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC-CCccEEeccCCCCEEEEEEeCCCCE
Confidence 33211 12246899999999 79999999999999998875 44 67887 9999999999999999
Q ss_pred EEEEcCCcEEEEEcc
Q 047036 478 ILGTTDTYLILICTL 492 (634)
Q Consensus 478 LlSS~D~tIrLWD~~ 492 (634)
|+++.|++|+|||++
T Consensus 229 l~s~~~~~v~iwd~~ 243 (343)
T 3lrv_A 229 MVVECDQTVVCFDLR 243 (343)
T ss_dssp EEEEESSBEEEEETT
T ss_pred EEEEeCCeEEEEEcC
Confidence 999557799999986
No 54
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.91 E-value=9.6e-23 Score=203.37 Aligned_cols=280 Identities=10% Similarity=0.081 Sum_probs=179.6
Q ss_pred CCcEEEeee-CCC-eEEEec------CeeeEEEccCCceecceeEEEecCC-CCCcccccCcceeeEEeCCcceEEecCC
Q 047036 255 GVQSLTLGA-LDN-SFLVSD------LGLQVYRNYNRGIHNKGVSVRFDGG-SSKIGSNSTPKKALLMRGETNMMLMSPL 325 (634)
Q Consensus 255 ~~~~LavG~-~D~-sfvv~G------~~igV~k~~~~gl~~~~~~~~~~~~-~~~~g~~fsP~~~mL~~~D~~mllsss~ 325 (634)
.....++.+ +++ .+++.| ..|.||....+.+.. ...+ +| .++...+|+|+. .++++|++++.
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~---~~~~-~~~~~v~~~~~~~~~-----~~~~~l~~~~~ 88 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL---LREI-EKAKPIKCGTFGATS-----LQQRYLATGDF 88 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE---EEEE-EESSCEEEEECTTCC-----TTTCCEEEEET
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc---eeee-cccCcEEEEEEcCCC-----CCCceEEEecC
Confidence 345788888 766 566555 479999876544211 1111 22 233555566542 12466777776
Q ss_pred CCCCCCCCcEEEEeCCCCc-EEEEEeccCCCcceeEEEE------ecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCce
Q 047036 326 KDGKPQAPGVQQLDIETGK-IVTEWKFEKDGTDITMRDI------TNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGI 398 (634)
Q Consensus 326 d~~~~~~~TIrlWDleTGK-~V~~lkgH~~~V~I~vvsf------sPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~ 398 (634)
| ++|++||+.+++ .+..+.+|...| ..++| +|+ +..+++|+.|++|++||++.+.+.
T Consensus 89 d------g~i~iwd~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~s~~--------~~~l~~~~~d~~i~vwd~~~~~~~ 152 (357)
T 3i2n_A 89 G------GNLHIWNLEAPEMPVYSVKGHKEII--NAIDGIGGLGIGEG--------APEIVTGSRDGTVKVWDPRQKDDP 152 (357)
T ss_dssp T------SCEEEECTTSCSSCSEEECCCSSCE--EEEEEESGGGCC-C--------CCEEEEEETTSCEEEECTTSCSSC
T ss_pred C------CeEEEEeCCCCCccEEEEEecccce--EEEeeccccccCCC--------ccEEEEEeCCCeEEEEeCCCCCCc
Confidence 5 689999999998 999999999976 34444 565 679999999999999999987645
Q ss_pred EEecccCCCCccccccccccccCcceEEEE----ECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECC
Q 047036 399 VQNMVKGDSPVLHWTQGHQFSRGTNFQCFA----STGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTY 473 (634)
Q Consensus 399 Vq~l~gh~s~V~~~~~g~~y~~~~~fssva----~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSp 473 (634)
+..+..|... ....+.+++ +++++ +|++|+.||.|++||+.+++ . ....+|..+|++|+|+|
T Consensus 153 ~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~-~~~~~~~~~v~~~~~~~ 219 (357)
T 3i2n_A 153 VANMEPVQGE-----------NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA-L-RWETNIKNGVCSLEFDR 219 (357)
T ss_dssp SEEECCCTTS-----------CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE-E-EEEEECSSCEEEEEESC
T ss_pred ceeccccCCC-----------CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc-e-eeecCCCCceEEEEcCC
Confidence 5666433321 123466666 67888 79999999999999998753 3 44567999999999999
Q ss_pred ---CCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCc
Q 047036 474 ---DGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQE 549 (634)
Q Consensus 474 ---DGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E 549 (634)
+|.+|++ +.|++|+|||+.. ++.+..|. +...+.|... ...+.|+|. + .
T Consensus 220 ~~~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~------------~~~~~~~~~~-v~~~~~~~~--------~--~ 272 (357)
T 3i2n_A 220 KDISMNKLVATSLEGKFHVFDMRT----QHPTKGFA------------SVSEKAHKST-VWQVRHLPQ--------N--R 272 (357)
T ss_dssp SSSSCCEEEEEESTTEEEEEEEEE----EETTTEEE------------EEEEECCSSC-EEEEEEETT--------E--E
T ss_pred CCCCCCEEEEECCCCeEEEEeCcC----CCccccee------------eeccCCCcCC-EEEEEECCC--------C--C
Confidence 9999999 8899999999862 22222221 0000011100 012344433 2 2
Q ss_pred eEEEE-EcCCeEEEEeChhhhcccccccccccC------CcceeeEEEeccCCCeeeecc
Q 047036 550 RHLVA-TVGKFSVIWDFQQVKNSAHECYRNQQG------LKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 550 ~~Ivt-Stg~~viiWdl~~v~~~~~~~y~~~~~------~~~~~~Y~i~~~~~~i~~~~f 602 (634)
..|++ +.++.|.+||+..-...... ...| ++--....+..+...|..+.|
T Consensus 273 ~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~ 329 (357)
T 3i2n_A 273 ELFLTAGGAGGLHLWKYEYPIQRSKK---DSEGIEMGVAGSVSLLQNVTLSTQPISSLDW 329 (357)
T ss_dssp EEEEEEETTSEEEEEEEECCSCC--C---CTTSCCCCCCCEEEEEEEEECCSSCEEEEEE
T ss_pred cEEEEEeCCCcEEEeecCCCcccccc---cCCCCccccccccceeeccccCCCCeeEEEE
Confidence 24544 77999999998742211000 0000 011124677888999998887
No 55
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.91 E-value=4.8e-23 Score=214.44 Aligned_cols=190 Identities=9% Similarity=0.046 Sum_probs=142.1
Q ss_pred EEEeee-CCCeEEE--ec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 258 SLTLGA-LDNSFLV--SD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 258 ~LavG~-~D~sfvv--~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
+.+|++ +|+++++ .| ..|+||...... ....+..+..+.+++|+|++ ++|+++++
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~-----~~~~~~~~~~V~~v~fspdg--------~~l~s~s~------ 196 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLT-----EKFEIETRGEVKDLHFSTDG--------KVVAYITG------ 196 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTE-----EEEEEECSSCCCEEEECTTS--------SEEEEECS------
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc-----EEEEeCCCCceEEEEEccCC--------ceEEeccc------
Confidence 677888 8988764 43 478999865532 22334333344666677665 45556654
Q ss_pred CCcEEEEeCCCCcEEEE--EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCC----eEEEEEcCCCCce---EEec
Q 047036 332 APGVQQLDIETGKIVTE--WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDN----RLCQWDMRDRSGI---VQNM 402 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~--lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~----tIklWD~R~~~~~---Vq~l 402 (634)
+++++|+..+|+.+.. +.+|...| ..++|+|+ +..+++++.|+ +|++||++..... ...+
T Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~~~~v--~~v~fspd--------g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~ 265 (365)
T 4h5i_A 197 -SSLEVISTVTGSCIARKTDFDKNWSL--SKINFIAD--------DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQV 265 (365)
T ss_dssp -SCEEEEETTTCCEEEEECCCCTTEEE--EEEEEEET--------TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEE
T ss_pred -eeEEEEEeccCcceeeeecCCCCCCE--EEEEEcCC--------CCEEEEEecCCcceeEEeecccccceecceeeeee
Confidence 3688899888987754 45687765 56699999 67899999988 7999998865321 1223
Q ss_pred ccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-
Q 047036 403 VKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG- 480 (634)
Q Consensus 403 ~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS- 480 (634)
.+|. ..++|++|+|+| +||+||.||+|||||+.+++...+.+.||..+|++|+|||||++|||
T Consensus 266 ~~~~---------------~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 266 TNRF---------------KGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASV 330 (365)
T ss_dssp ESSC---------------SCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEE
T ss_pred cCCC---------------CCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEE
Confidence 3332 346899999999 79999999999999998875333457899999999999999999999
Q ss_pred EcCCcEEEEEcc
Q 047036 481 TTDTYLILICTL 492 (634)
Q Consensus 481 S~D~tIrLWD~~ 492 (634)
|.|++|||||+.
T Consensus 331 S~D~tvrvw~ip 342 (365)
T 4h5i_A 331 SAANTIHIIKLP 342 (365)
T ss_dssp ETTSEEEEEECC
T ss_pred eCCCeEEEEEcC
Confidence 999999999974
No 56
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.6e-23 Score=231.72 Aligned_cols=249 Identities=9% Similarity=-0.017 Sum_probs=165.7
Q ss_pred CCcccccCcce---------eeEEeC-----------CcceEEecCCCCCCCCCCcEEEEeCCCCcEE----EEEeccCC
Q 047036 299 SKIGSNSTPKK---------ALLMRG-----------ETNMMLMSPLKDGKPQAPGVQQLDIETGKIV----TEWKFEKD 354 (634)
Q Consensus 299 ~~~g~~fsP~~---------~mL~~~-----------D~~mllsss~d~~~~~~~TIrlWDleTGK~V----~~lkgH~~ 354 (634)
++.+++|+|.. .+|+-+ +.+++++++.| ++|++||+.++++. .++.+|.+
T Consensus 135 ~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D------~tI~iWd~~~~~~~~~~~~~l~~~~~ 208 (524)
T 2j04_B 135 LVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHS------SCIQIFKMNTSTLHCVKVQTIVHSFG 208 (524)
T ss_dssp --CCCSCEEECCCCSSCSSEEEEEEEEEC------------------C------EEEEEEEEETTTCCEEEEEEEEECCC
T ss_pred ceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCC------ceEEEEEccCCCCCceEEEEEEecCC
Confidence 44788888875 344332 23345445443 79999999998753 45778888
Q ss_pred CcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCce----------EEecccCCCCccccccccccccCcce
Q 047036 355 GTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGI----------VQNMVKGDSPVLHWTQGHQFSRGTNF 424 (634)
Q Consensus 355 ~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~----------Vq~l~gh~s~V~~~~~g~~y~~~~~f 424 (634)
.| ..++|+|++++.+ .+.+||+|+.|++|++||+..+.+. +.++.+| ...+
T Consensus 209 ~V--~~v~wsp~~~~~~--~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h---------------~~~v 269 (524)
T 2j04_B 209 EV--WDLKWHEGCHAPH--LVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLA---------------DSLI 269 (524)
T ss_dssp SE--EEEEECSSCCCSS--SSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCT---------------TTCE
T ss_pred cE--EEEEECCCCCCCC--CCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcC---------------CCCE
Confidence 76 4569999743221 1469999999999999999865321 1122222 2457
Q ss_pred EEEEECCCCeEEEEECCCcEEEEeccccccccccccCCCCCeEEE--EECCCC-CEEEE-EcCCcEEEEEcccccCCCCe
Q 047036 425 QCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHV--DVTYDG-KWILG-TTDTYLILICTLFSDKDGKT 500 (634)
Q Consensus 425 ssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsV--dfSpDG-k~LlS-S~D~tIrLWD~~~~~~~G~~ 500 (634)
+|+++++++.||+||.||+|+|||+.+++.....+.+|..+|++| +|+|+| ++||| |.|++|+|||++ ++++
T Consensus 270 ~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~----~~~~ 345 (524)
T 2j04_B 270 TTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK----DIAT 345 (524)
T ss_dssp EEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG----GHHH
T ss_pred EEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC----CCCc
Confidence 899999888999999999999999986543455789999999999 679999 89999 999999999986 4666
Q ss_pred eeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChhhhccccccccccc
Q 047036 501 KTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQ 580 (634)
Q Consensus 501 ~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~v~~~~~~~y~~~~ 580 (634)
+..+.+|.... . ...+.|+|. + ...++++.|+.|.+||+.. +..
T Consensus 346 ~~~~~~~~~~~------------~----v~~v~fsp~--------~--~~l~s~~~d~tv~lwd~~~---~~~------- 389 (524)
T 2j04_B 346 TKTTVSRFRGS------------N----LVPVVYCPQ--------I--YSYIYSDGASSLRAVPSRA---AFA------- 389 (524)
T ss_dssp HCEEEEECSCC------------S----CCCEEEETT--------T--TEEEEECSSSEEEEEETTC---TTC-------
T ss_pred ccccccccccC------------c----ccceEeCCC--------c--CeEEEeCCCCcEEEEECcc---ccc-------
Confidence 66666665210 0 023455543 2 2344556788999999874 221
Q ss_pred CCcceeeEEEeccCCCeeeeccccCc--cccCCCCCCCEEE
Q 047036 581 GLKSCYCYKIVLKDESIVESRFMHDK--FAVTDSPEAPLVV 619 (634)
Q Consensus 581 ~~~~~~~Y~i~~~~~~i~~~~f~~d~--f~~~~~~~~~iiv 619 (634)
...+..|...|.++.| +++ +.++++.|..|.|
T Consensus 390 ------~~~l~gH~~~V~sva~-Sp~g~~l~Sgs~Dgtv~l 423 (524)
T 2j04_B 390 ------VHPLVSRETTITAIGV-SRLHPMVLAGSADGSLII 423 (524)
T ss_dssp ------CEEEEECSSCEEEEEC-CSSCCBCEEEETTTEEEC
T ss_pred ------ceeeecCCCceEEEEe-CCCCCeEEEEECCCEEEE
Confidence 1457788889998888 433 2233333455543
No 57
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.91 E-value=2.3e-22 Score=205.89 Aligned_cols=204 Identities=9% Similarity=0.059 Sum_probs=148.9
Q ss_pred CcEEEeee-CCC-eEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCC
Q 047036 256 VQSLTLGA-LDN-SFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGK 329 (634)
Q Consensus 256 ~~~LavG~-~D~-sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~ 329 (634)
....++.+ +++ .+++.| ..|.||........ ....+.+|. .+.+.+|+|. ++++|++++.|
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~h~~~v~~~~~~~~-------~~~~l~s~~~d--- 140 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT---SFIQGMGPGDAITGMKFNQF-------NTNQLFVSSIR--- 140 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE---EEECCCSTTCBEEEEEEETT-------EEEEEEEEETT---
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc---eeeecCCcCCceeEEEeCCC-------CCCEEEEEeCC---
Confidence 34777787 776 677765 58899987544311 111122331 2234444442 44567777665
Q ss_pred CCCCcEEEEeCCCCcEEEEEeccC---CCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCC
Q 047036 330 PQAPGVQQLDIETGKIVTEWKFEK---DGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGD 406 (634)
Q Consensus 330 ~~~~TIrlWDleTGK~V~~lkgH~---~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~ 406 (634)
++|++||+. ++.+..+.+|. ..| ..++|+|+ +..+++|+.|++|++||++. ..+..+.+|.
T Consensus 141 ---~~i~iwd~~-~~~~~~~~~~~~~~~~v--~~~~~~~~--------~~~l~~~~~d~~i~i~d~~~--~~~~~~~~h~ 204 (383)
T 3ei3_B 141 ---GATTLRDFS-GSVIQVFAKTDSWDYWY--CCVDVSVS--------RQMLATGDSTGRLLLLGLDG--HEIFKEKLHK 204 (383)
T ss_dssp ---TEEEEEETT-SCEEEEEECCCCSSCCE--EEEEEETT--------TTEEEEEETTSEEEEEETTS--CEEEEEECSS
T ss_pred ---CEEEEEECC-CCceEEEeccCCCCCCe--EEEEECCC--------CCEEEEECCCCCEEEEECCC--CEEEEeccCC
Confidence 799999999 57788887665 544 56799998 67999999999999999953 3466776554
Q ss_pred CCccccccccccccCcceEEEEECCCC--eEEEEECCCcEEEEeccccc---cccccccCCCCCeEEEEECC-CCCEEEE
Q 047036 407 SPVLHWTQGHQFSRGTNFQCFASTGDG--SIVVGSLDGKIRLYSKTSMR---QAKTAFPGLGSPITHVDVTY-DGKWILG 480 (634)
Q Consensus 407 s~V~~~~~g~~y~~~~~fssva~s~dG--~IASGS~DGtIRLWD~~t~r---~akt~L~GH~d~ItsVdfSp-DGk~LlS 480 (634)
. .+.+++++|++ .||+|+.||+|+|||+.+.+ .....+ +|..+|++|+|+| ||++|++
T Consensus 205 ~---------------~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~ 268 (383)
T 3ei3_B 205 A---------------KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLT 268 (383)
T ss_dssp S---------------CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEE
T ss_pred C---------------cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEE
Confidence 4 35789999988 59999999999999988632 133344 7999999999999 9999999
Q ss_pred -EcCCcEEEEEcccccCCCCeeeeecCCC
Q 047036 481 -TTDTYLILICTLFSDKDGKTKTGFSGRM 508 (634)
Q Consensus 481 -S~D~tIrLWD~~~~~~~G~~~~gF~gh~ 508 (634)
+.|++|+|||+. +++.+..+.+|.
T Consensus 269 ~~~d~~i~iwd~~----~~~~~~~~~~~~ 293 (383)
T 3ei3_B 269 TDQRNEIRVYSSY----DWSKPDQIIIHP 293 (383)
T ss_dssp EESSSEEEEEETT----BTTSCSEEEECC
T ss_pred EcCCCcEEEEECC----CCcccccccccc
Confidence 899999999986 566666677665
No 58
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.91 E-value=6.5e-23 Score=213.72 Aligned_cols=255 Identities=15% Similarity=0.208 Sum_probs=171.6
Q ss_pred CcEEEeee-C-CCeEEEec---CeeeEEEccC--CceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCC
Q 047036 256 VQSLTLGA-L-DNSFLVSD---LGLQVYRNYN--RGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDG 328 (634)
Q Consensus 256 ~~~LavG~-~-D~sfvv~G---~~igV~k~~~--~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~ 328 (634)
..+.++.+ + |+.+++.| ..|.||.... .+.... ....+ .| -.+...+.+.+++++|++++.|
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~-~h-------~~~v~~~~~~~~~~~l~s~s~d-- 132 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYS-SSLTY-DC-------SSTVTQITMIPNFDAFAVSSKD-- 132 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCS-CSEEE-EC-------SSCEEEEEECTTSSEEEEEETT--
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccc-eeeec-cC-------CCCEEEEEEeCCCCEEEEEeCC--
Confidence 45777777 7 88888876 4899998643 111111 11122 12 1234445555566777888775
Q ss_pred CCCCCcEEEEeCC---CCcEEEEEeccCCCcceeEEEEe----------------cCCCCCCCCCCCEEEEEeCCCeEEE
Q 047036 329 KPQAPGVQQLDIE---TGKIVTEWKFEKDGTDITMRDIT----------------NDTKSSQLDPSESTFLGLDDNRLCQ 389 (634)
Q Consensus 329 ~~~~~TIrlWDle---TGK~V~~lkgH~~~V~I~vvsfs----------------Pd~K~~q~~~g~~laSGS~D~tIkl 389 (634)
++|++||++ +|++++.+.+|. |..+.|+ |+ +..+++|+.|++|++
T Consensus 133 ----g~i~vwd~~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~~~d~~i~i 196 (437)
T 3gre_A 133 ----GQIIVLKVNHYQQESEVKFLNCEC----IRKINLKNFGKNEYAVRMRAFVNEE--------KSLLVALTNLSRVII 196 (437)
T ss_dssp ----SEEEEEEEEEEEETTEEEEEEEEE----EEEEEGGGGSSCCCEEEEEEEECSS--------CEEEEEEETTSEEEE
T ss_pred ----CEEEEEEeccccCCceeeccccce----eEEEEccCcccccCceEEEEEEcCC--------CCEEEEEeCCCeEEE
Confidence 799999995 888888887762 2233433 34 579999999999999
Q ss_pred EEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccccccccc-CCCCCeE
Q 047036 390 WDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFP-GLGSPIT 467 (634)
Q Consensus 390 WD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~-GH~d~It 467 (634)
||++++.. +..+.++. +...+++++++|+| +||+|+.||+|+|||+.+++ ....+. +|..+|+
T Consensus 197 wd~~~~~~-~~~~~~~~-------------h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~ 261 (437)
T 3gre_A 197 FDIRTLER-LQIIENSP-------------RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV-LIRSWSFGDHAPIT 261 (437)
T ss_dssp EETTTCCE-EEEEECCG-------------GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE-EEEEEBCTTCEEEE
T ss_pred EeCCCCee-eEEEccCC-------------CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc-EEEEEecCCCCceE
Confidence 99998654 56665410 12247899999999 79999999999999998764 555554 7888999
Q ss_pred EE----EECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccc-----cC--CCcccc
Q 047036 468 HV----DVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHL-----AG--TDNKIH 535 (634)
Q Consensus 468 sV----dfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~-----~g--~~i~Ft 535 (634)
+| +|+|||++|++ +.|++|+|||+. +|+++..|.+|... +..+.+.|..... .+ .....+
T Consensus 262 ~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~v~ 333 (437)
T 3gre_A 262 HVEVCQFYGKNSVIVVGGSSKTFLTIWNFV----KGHCQYAFINSDEQ----PSMEHFLPIEKGLEELNFCGIRSLNALS 333 (437)
T ss_dssp EEEECTTTCTTEEEEEEESTTEEEEEEETT----TTEEEEEEESSSSC----CCGGGGSCBCSSGGGCCCCCCCSGGGGC
T ss_pred EEEeccccCCCccEEEEEcCCCcEEEEEcC----CCcEEEEEEcCCCC----CccceecccccccccceecccccCCceE
Confidence 99 55568999999 789999999986 68889999988642 2233344432110 00 011122
Q ss_pred cccccccccCCCCceEEEE-EcCCeEEEEeChh
Q 047036 536 GGHFSWVTENGKQERHLVA-TVGKFSVIWDFQQ 567 (634)
Q Consensus 536 ~a~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~~ 567 (634)
...|+. + .+|++ +.|+.|++||+..
T Consensus 334 ~l~~~~----~---~~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 334 TISVSN----D---KILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp CEEEET----T---EEEEEEGGGTEEEEEETTC
T ss_pred EEEECC----c---eEEEecCCCCeEEEEECCC
Confidence 233431 2 45655 5699999999974
No 59
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.91 E-value=4e-21 Score=194.67 Aligned_cols=275 Identities=12% Similarity=0.097 Sum_probs=181.8
Q ss_pred CcEEEeee-C-CCeEEEec---CeeeEEEccCCceecceeEEEe--cCCCCCcccccCcceeeEEeC-CcceEEecCCCC
Q 047036 256 VQSLTLGA-L-DNSFLVSD---LGLQVYRNYNRGIHNKGVSVRF--DGGSSKIGSNSTPKKALLMRG-ETNMMLMSPLKD 327 (634)
Q Consensus 256 ~~~LavG~-~-D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~--~~~~~~~g~~fsP~~~mL~~~-D~~mllsss~d~ 327 (634)
....++.+ + ++.+++.| ..|.||..........-..... ..... ....-.+...+.+.+ +.++|++++.|
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~d- 121 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDH-PDVHRYSVETVQWYPHDTGMFTSSSFD- 121 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTC-TTCCSSCEEEEEECTTCTTCEEEEETT-
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccc-cccCCCcEEEEEEccCCCcEEEEEeCC-
Confidence 34777777 6 88877765 4788998755432111000000 00000 000112334444444 56677777765
Q ss_pred CCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCC
Q 047036 328 GKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDS 407 (634)
Q Consensus 328 ~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s 407 (634)
++|++||+.+++++..+.. ...+ ..+.++|.++. +..+++|+.|+.|++||++++.. +..+.+|..
T Consensus 122 -----~~i~iwd~~~~~~~~~~~~-~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~v~~~d~~~~~~-~~~~~~~~~ 187 (408)
T 4a11_B 122 -----KTLKVWDTNTLQTADVFNF-EETV--YSHHMSPVSTK-----HCLVAVGTRGPKVQLCDLKSGSC-SHILQGHRQ 187 (408)
T ss_dssp -----SEEEEEETTTTEEEEEEEC-SSCE--EEEEECSSCSS-----CCEEEEEESSSSEEEEESSSSCC-CEEECCCCS
T ss_pred -----CeEEEeeCCCCccceeccC-CCce--eeeEeecCCCC-----CcEEEEEcCCCeEEEEeCCCcce-eeeecCCCC
Confidence 7999999999999999884 4443 45688886431 45999999999999999998654 456655443
Q ss_pred CccccccccccccCcceEEEEECCCC-e-EEEEECCCcEEEEecccccccccc---------------ccCCCCCeEEEE
Q 047036 408 PVLHWTQGHQFSRGTNFQCFASTGDG-S-IVVGSLDGKIRLYSKTSMRQAKTA---------------FPGLGSPITHVD 470 (634)
Q Consensus 408 ~V~~~~~g~~y~~~~~fssva~s~dG-~-IASGS~DGtIRLWD~~t~r~akt~---------------L~GH~d~ItsVd 470 (634)
.+.+++++|++ + ||+|+.||.|++||+.+....... +.+|..+|++|+
T Consensus 188 ---------------~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 188 ---------------EILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp ---------------CEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred ---------------cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence 46899999998 4 899999999999998654322222 368999999999
Q ss_pred ECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCc
Q 047036 471 VTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQE 549 (634)
Q Consensus 471 fSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E 549 (634)
|+|+|++|++ +.|++|++||+. .++....+.++..... .....+... . +...
T Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~----~~~~~~~~~~~~~~~~----------------~~~~~~~~~-----~--~~~~ 305 (408)
T 4a11_B 253 FTSDGLHLLTVGTDNRMRLWNSS----NGENTLVNYGKVCNNS----------------KKGLKFTVS-----C--GCSS 305 (408)
T ss_dssp ECTTSSEEEEEETTSCEEEEETT----TCCBCCCCCCCCCCCC----------------SSCCCCEEC-----C--SSSS
T ss_pred EcCCCCEEEEecCCCeEEEEECC----CCccceeccccccccc----------------cccceeEEe-----c--CCCc
Confidence 9999999999 899999999986 4554443433322110 011222211 0 1123
Q ss_pred eEEEEEcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeecccc
Q 047036 550 RHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMH 604 (634)
Q Consensus 550 ~~IvtStg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~~ 604 (634)
..++++.++.|.+||+.. +.. ...+..+...|..+.|..
T Consensus 306 ~~~~~~~~~~i~v~d~~~---~~~-------------~~~~~~~~~~v~~~~~s~ 344 (408)
T 4a11_B 306 EFVFVPYGSTIAVYTVYS---GEQ-------------ITMLKGHYKTVDCCVFQS 344 (408)
T ss_dssp CEEEEEETTEEEEEETTT---CCE-------------EEEECCCSSCEEEEEEET
T ss_pred eEEEEecCCEEEEEECcC---Ccc-------------eeeeccCCCeEEEEEEcC
Confidence 577788899999999873 332 246778889999888843
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.91 E-value=2.5e-22 Score=202.07 Aligned_cols=232 Identities=13% Similarity=0.121 Sum_probs=156.2
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCc--EEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEE
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGK--IVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLC 388 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK--~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIk 388 (634)
+.+++++++|++++.+ ++|++||+.+++ .+.++.+|...| ..++|+|+ +..+++|+.|++|+
T Consensus 14 ~~~s~~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~--------~~~l~~~~~dg~i~ 77 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNN------HEVHIYEKSGNKWVQVHELKEHNGQV--TGVDWAPD--------SNRIVTCGTDRNAY 77 (372)
T ss_dssp EEECTTSSEEEEECSS------SEEEEEEEETTEEEEEEEEECCSSCE--EEEEEETT--------TTEEEEEETTSCEE
T ss_pred EEECCCCCEEEEEeCC------CEEEEEeCCCCcEEeeeeecCCCCcc--cEEEEeCC--------CCEEEEEcCCCeEE
Confidence 3334455667777654 799999999998 999999999976 46699998 67999999999999
Q ss_pred EEEcCCCCce-EEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccc---ccccccCCC
Q 047036 389 QWDMRDRSGI-VQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQ---AKTAFPGLG 463 (634)
Q Consensus 389 lWD~R~~~~~-Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~---akt~L~GH~ 463 (634)
+||++.+... ...+.+| ...+.+++++++| +||+|+.||.|++||+...+. ......+|.
T Consensus 78 vwd~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~ 142 (372)
T 1k8k_C 78 VWTLKGRTWKPTLVILRI---------------NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIR 142 (372)
T ss_dssp EEEEETTEEEEEEECCCC---------------SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCC
T ss_pred EEECCCCeeeeeEEeecC---------------CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccC
Confidence 9999875421 1122222 3357899999998 899999999999999876431 234456899
Q ss_pred CCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCccccccccccc
Q 047036 464 SPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWV 542 (634)
Q Consensus 464 d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~ 542 (634)
.+|++|+|+|+|++|++ +.|++|++||+......... .....+...+..+.++..+.|... ...+.|+|.
T Consensus 143 ~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~----- 213 (372)
T 1k8k_C 143 STVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERP---APTPWGSKMPFGELMFESSSSCGW-VHGVCFSAN----- 213 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCC---CCBTTBSCCCTTCEEEECCCCSSC-EEEEEECSS-----
T ss_pred CCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccc---cccccccccchhhheEecCCCCCe-EEEEEECCC-----
Confidence 99999999999999999 88999999997532111100 000011111122233322222110 012333332
Q ss_pred ccCCCCceEEEEEcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeeccc
Q 047036 543 TENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFM 603 (634)
Q Consensus 543 t~~g~~E~~IvtStg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~ 603 (634)
+ ...++++.++.|.+||+.. ++. ...+..+...|..+.|-
T Consensus 214 ---~--~~l~~~~~d~~i~i~d~~~---~~~-------------~~~~~~~~~~v~~~~~~ 253 (372)
T 1k8k_C 214 ---G--SRVAWVSHDSTVCLADADK---KMA-------------VATLASETLPLLAVTFI 253 (372)
T ss_dssp ---S--SEEEEEETTTEEEEEEGGG---TTE-------------EEEEECSSCCEEEEEEE
T ss_pred ---C--CEEEEEeCCCEEEEEECCC---Cce-------------eEEEccCCCCeEEEEEe
Confidence 2 2445557899999999973 222 24667777788888873
No 61
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.91 E-value=1.1e-22 Score=213.03 Aligned_cols=256 Identities=15% Similarity=0.061 Sum_probs=157.1
Q ss_pred CCcceEEecCCCCCCCCCCcEEEEeCCCCcEEE-----EEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEE
Q 047036 315 GETNMMLMSPLKDGKPQAPGVQQLDIETGKIVT-----EWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQ 389 (634)
Q Consensus 315 ~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~-----~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIkl 389 (634)
.++++|++++.| ++||+||+.+|++.. .+.||.+.| ..++|+|..-......+++|||||.|++||+
T Consensus 99 ~~~~~las~~~d------~~v~lw~~~~~~~~~~~~~~~~~gH~~~v--~~v~~~p~~~~~~~~d~~~las~s~D~tv~~ 170 (393)
T 4gq1_A 99 VYSLFLACVCQD------NTVRLIITKNETIITQHVLGGKSGHHNFV--NDIDIADVYSADNRLAEQVIASVGDDCTLII 170 (393)
T ss_dssp EEEEEEEEEETT------SCEEEEEEETTEEEEEEEECTTTSCSSCE--EEEEEEEEECTTCSEEEEEEEEEETTSEEEE
T ss_pred CCCCEEEEEeCC------CcEEEEECCCCccceeeeecccCCCCCce--EEEEEccccccccCCCCCEEEEEECCCeEEE
Confidence 344456666654 799999999987643 478999987 4669998211000001579999999999999
Q ss_pred EEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC--eEEEEECCCcEEEEecccccccc-----------
Q 047036 390 WDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG--SIVVGSLDGKIRLYSKTSMRQAK----------- 456 (634)
Q Consensus 390 WD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG--~IASGS~DGtIRLWD~~t~r~ak----------- 456 (634)
||++.++++ ..+.+|.+ .+.+++|+|++ +||+|+.||+|||||+.+++...
T Consensus 171 Wd~~~~~~~-~~~~~~~~---------------~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 171 WRLTDEGPI-LAGYPLSS---------------PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEETTEEE-EEEEECSS---------------CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred EECCCCcee-eeecCCCC---------------CcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 999876654 34434433 35789999986 69999999999999987643111
Q ss_pred -------------ccccCCCCCeEEEEEC-CCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeec
Q 047036 457 -------------TAFPGLGSPITHVDVT-YDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLT 521 (634)
Q Consensus 457 -------------t~L~GH~d~ItsVdfS-pDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~ 521 (634)
....+|.+.|.+|.|+ |||+.|++ +.|+++++||+. .++....|.+|.... ..+.+.
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~----~~~~~~~l~~~~~~~----~~~~~~ 306 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLF----ANNDYNEISDSTMKL----GPKNLL 306 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------------CCS
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECc----cCCCCceEeeecCcc----ccEEEc
Confidence 1234788999999997 89999999 899999999986 355555566655421 111112
Q ss_pred CCCccccCCCcccccccccccccCCCCceEEEEE-cCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeee
Q 047036 522 PLDSHLAGTDNKIHGGHFSWVTENGKQERHLVAT-VGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVES 600 (634)
Q Consensus 522 Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtS-tg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~ 600 (634)
|........ .....+.|.+ . ....+++++ .|+.|.+||+.. ++.. ..+..+...|.++
T Consensus 307 ~~~~~~~~~-~~~~~~~~~~-~---~~~~~~~sgs~Dg~V~lwd~~~---~~~~-------------~~~~~~~~~V~sv 365 (393)
T 4gq1_A 307 PNVQGISLF-PSLLGACPHP-R---YMDYFATAHSQHGLIQLINTYE---KDSN-------------SIPIQLGMPIVDF 365 (393)
T ss_dssp CSEEEECSS-CCSSCCEECS-S---CTTEEEEEETTTTEEEEEETTC---TTCC-------------EEEEECSSCEEEE
T ss_pred ccccccccc-CcceeEEEcc-C---CCCEEEEEECCCCEEEEEECCC---CcEE-------------EEecCCCCcEEEE
Confidence 211100000 0111223332 1 123566664 589999999873 3221 2456778889988
Q ss_pred ccccCccccCCCCCCCEEEEcCCceeeeecc
Q 047036 601 RFMHDKFAVTDSPEAPLVVATPMKVSSISLS 631 (634)
Q Consensus 601 ~f~~d~f~~~~~~~~~iivA~~~~v~~~~~~ 631 (634)
.| +++ .+-|.+|+.+-|..+.+-
T Consensus 366 af-spd-------G~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 366 CW-HQD-------GSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp EE-CTT-------SSEEEEEESSEEEEEEEG
T ss_pred EE-cCC-------CCEEEEEeCCCeEEEEEe
Confidence 88 221 257788888888777663
No 62
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.5e-22 Score=199.65 Aligned_cols=199 Identities=7% Similarity=0.035 Sum_probs=147.6
Q ss_pred CcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCC
Q 047036 256 VQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKP 330 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~ 330 (634)
..+.++.+ +|+.+++.| ..|.||....... .....+.+|. ++.+..|+|. .++++|++++.|
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~h~~~v~~~~~~~~------~~~~~l~s~~~d---- 78 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH---KLIDTLTGHEGPVWRVDWAHP------KFGTILASCSYD---- 78 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE---EEEEEECCCSSCEEEEEECCG------GGCSEEEEEETT----
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc---eeeeEecCCCCcEEEEEeCCC------CCCCEEEEeccC----
Confidence 34777888 788877765 4799998653221 1233455552 2233444332 226677777765
Q ss_pred CCCcEEEEeCCCCc--EEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCc-eEEecccCCC
Q 047036 331 QAPGVQQLDIETGK--IVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSG-IVQNMVKGDS 407 (634)
Q Consensus 331 ~~~TIrlWDleTGK--~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~-~Vq~l~gh~s 407 (634)
++|++||+.+|+ .+..+.+|...| ..++|+|+.. +..+++|+.|++|++||++.... ....+.+|.
T Consensus 79 --g~v~iwd~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~- 147 (379)
T 3jrp_A 79 --GKVLIWKEENGRWSQIAVHAVHSASV--NSVQWAPHEY------GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA- 147 (379)
T ss_dssp --SCEEEEEEETTEEEEEEEECCCSSCE--EEEEECCGGG------CSEEEEEETTSEEEEEECCTTSCCCEEEEECCT-
T ss_pred --CEEEEEEcCCCceeEeeeecCCCcce--EEEEeCCCCC------CCEEEEecCCCcEEEEecCCCCceeeEEecCCC-
Confidence 799999999998 888999999876 5669999721 36899999999999999997632 223333333
Q ss_pred CccccccccccccCcceEEEEECC-------------CC-eEEEEECCCcEEEEeccccc---cccccccCCCCCeEEEE
Q 047036 408 PVLHWTQGHQFSRGTNFQCFASTG-------------DG-SIVVGSLDGKIRLYSKTSMR---QAKTAFPGLGSPITHVD 470 (634)
Q Consensus 408 ~V~~~~~g~~y~~~~~fssva~s~-------------dG-~IASGS~DGtIRLWD~~t~r---~akt~L~GH~d~ItsVd 470 (634)
..+.+++++| ++ +||+|+.||.|+|||+.+.+ .....+.+|..+|++|+
T Consensus 148 --------------~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~ 213 (379)
T 3jrp_A 148 --------------IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 213 (379)
T ss_dssp --------------TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred --------------CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEE
Confidence 3468889988 56 89999999999999987642 13357889999999999
Q ss_pred ECCC---CCEEEE-EcCCcEEEEEcc
Q 047036 471 VTYD---GKWILG-TTDTYLILICTL 492 (634)
Q Consensus 471 fSpD---Gk~LlS-S~D~tIrLWD~~ 492 (634)
|+|+ |++|++ +.|++|+|||+.
T Consensus 214 ~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 214 WSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 9999 899999 899999999976
No 63
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.9e-22 Score=202.00 Aligned_cols=233 Identities=10% Similarity=0.148 Sum_probs=168.4
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQA 332 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~ 332 (634)
...++.+ +|+.+++.| ..|.||. .... ....+.+|. .|...+.+.+++++|++++.|
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~-----~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~d------ 170 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWN-KTGA-----LLNVLNFHR-------APIVSVKWNKDGTHIISMDVE------ 170 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEE-TTSC-----EEEEECCCC-------SCEEEEEECTTSSEEEEEETT------
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCC-----eeeeccCCC-------ccEEEEEECCCCCEEEEEecC------
Confidence 4677777 777777754 4788887 2221 233444442 233444455566677777765
Q ss_pred CcEEEEeCCCCcEEEEEeccCCC---------------cceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDG---------------TDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSG 397 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~---------------V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~ 397 (634)
++|++||+.+|+.+..+..|... | ..++|+|+ ..+++|+.|+.|++||++.+..
T Consensus 171 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---------~~~~~~~~~g~i~~~d~~~~~~ 239 (425)
T 1r5m_A 171 NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLG--VDVEWVDD---------DKFVIPGPKGAIFVYQITEKTP 239 (425)
T ss_dssp CCEEEEETTTTEEEEEECCC---------------CCCB--SCCEEEET---------TEEEEECGGGCEEEEETTCSSC
T ss_pred CeEEEEECCCCcEEEEeeccccCccceeeccccCCccee--eEEEEcCC---------CEEEEEcCCCeEEEEEcCCCce
Confidence 68999999999999999998875 4 34588886 5799999999999999998653
Q ss_pred eEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCC
Q 047036 398 IVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGK 476 (634)
Q Consensus 398 ~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk 476 (634)
+..+.+|.. .+.++++++++ +||+|+.||.|++||+.+++ ....+.+|..+|++|+|+|+|
T Consensus 240 -~~~~~~~~~---------------~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~- 301 (425)
T 1r5m_A 240 -TGKLIGHHG---------------PISVLEFNDTNKLLLSASDDGTLRIWHGGNGN-SQNCFYGHSQSIVSASWVGDD- 301 (425)
T ss_dssp -SEEECCCSS---------------CEEEEEEETTTTEEEEEETTSCEEEECSSSBS-CSEEECCCSSCEEEEEEETTT-
T ss_pred -eeeeccCCC---------------ceEEEEECCCCCEEEEEcCCCEEEEEECCCCc-cceEecCCCccEEEEEECCCC-
Confidence 455544433 46889999998 89999999999999998864 777888999999999999999
Q ss_pred EEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEE
Q 047036 477 WILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVAT 555 (634)
Q Consensus 477 ~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtS 555 (634)
+|++ +.|++|++||+. .++.+..+.+|.... ..+.|+|. + ...++++
T Consensus 302 ~l~~~~~d~~i~i~d~~----~~~~~~~~~~~~~~i------------------~~~~~s~~--------~--~~l~~~~ 349 (425)
T 1r5m_A 302 KVISCSMDGSVRLWSLK----QNTLLALSIVDGVPI------------------FAGRISQD--------G--QKYAVAF 349 (425)
T ss_dssp EEEEEETTSEEEEEETT----TTEEEEEEECTTCCE------------------EEEEECTT--------S--SEEEEEE
T ss_pred EEEEEeCCCcEEEEECC----CCcEeEecccCCccE------------------EEEEEcCC--------C--CEEEEEE
Confidence 8887 999999999985 566666666553210 12344433 2 2344557
Q ss_pred cCCeEEEEeChhhh
Q 047036 556 VGKFSVIWDFQQVK 569 (634)
Q Consensus 556 tg~~viiWdl~~v~ 569 (634)
.++.|.+||+..-.
T Consensus 350 ~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 350 MDGQVNVYDLKKLN 363 (425)
T ss_dssp TTSCEEEEECHHHH
T ss_pred CCCeEEEEECCCCc
Confidence 79999999998544
No 64
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.91 E-value=7.6e-22 Score=207.27 Aligned_cols=235 Identities=17% Similarity=0.232 Sum_probs=159.2
Q ss_pred CCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCC
Q 047036 265 DNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIE 341 (634)
Q Consensus 265 D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDle 341 (634)
++.+++.| ..|.||...... ....+.+|. .+...+.+.+++ +|++++.| ++|++||++
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~-----~~~~~~~h~-------~~V~~l~~~~~~-~l~s~s~d------g~i~vwd~~ 191 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKK-----FLLQLSGHD-------GGVWALKYAHGG-ILVSGSTD------RTVRVWDIK 191 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTE-----EEEEECCCS-------SCEEEEEECSTT-EEEEEETT------SCEEEEETT
T ss_pred CCCEEEEEcCCCcEEEEECCCCc-----EEEEEeCCC-------cCEEEEEEcCCC-EEEEEeCC------CCEEEEECC
Confidence 34455554 478889865532 334455652 122333333333 56667665 799999999
Q ss_pred CCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCc-----------c
Q 047036 342 TGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPV-----------L 410 (634)
Q Consensus 342 TGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V-----------~ 410 (634)
+|+++..+.+|...| ..++|+|... +..+++|+.|++|++||++...........+..+. .
T Consensus 192 ~~~~~~~~~~h~~~v--~~l~~~~~~~------~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (464)
T 3v7d_B 192 KGCCTHVFEGHNSTV--RCLDIVEYKN------IKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFV 263 (464)
T ss_dssp TTEEEEEECCCSSCE--EEEEEEESSS------CEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEE
T ss_pred CCcEEEEECCCCCcc--EEEEEecCCC------CCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEE
Confidence 999999999999986 4568885311 57899999999999999997643210000000000 0
Q ss_pred ccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEE
Q 047036 411 HWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLIL 488 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrL 488 (634)
....+ +...+.++ ++++ +||+|+.||+|++||+.+++ ....+.+|..+|++++|+|+|++|++ +.|++|++
T Consensus 264 ~~~~~----~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~v 336 (464)
T 3v7d_B 264 GVLRG----HMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMK-CLYILSGHTDRIYSTIYDHERKRCISASMDTTIRI 336 (464)
T ss_dssp EEECC----CSSCEEEE--EEETTEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred EEccC----ccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCc-EEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 00011 12233444 4556 89999999999999998864 77789999999999999999999999 99999999
Q ss_pred EEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChh
Q 047036 489 ICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQ 567 (634)
Q Consensus 489 WD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~ 567 (634)
||+. +|+++..|.+|.... + .+.| + + ...++++.|+.|.+||+..
T Consensus 337 wd~~----~~~~~~~~~~h~~~v----~--------------~~~~-----~-----~--~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 337 WDLE----NGELMYTLQGHTALV----G--------------LLRL-----S-----D--KFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp EETT----TTEEEEEECCCSSCE----E--------------EEEE-----C-----S--SEEEEEETTSEEEEEETTT
T ss_pred EECC----CCcEEEEEeCCCCcE----E--------------EEEE-----c-----C--CEEEEEeCCCcEEEEECCC
Confidence 9986 688888888775311 1 1222 2 1 1345557889999999874
No 65
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.91 E-value=4e-23 Score=206.28 Aligned_cols=206 Identities=13% Similarity=0.087 Sum_probs=140.5
Q ss_pred cEEEeee-CC----CeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeC-CcceEEecCCCC
Q 047036 257 QSLTLGA-LD----NSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRG-ETNMMLMSPLKD 327 (634)
Q Consensus 257 ~~LavG~-~D----~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~-D~~mllsss~d~ 327 (634)
...++.+ ++ +.+++.| ..|.||...... ....+.+|. .+...+.+++ ++++|++++.|
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~-------~~i~~~~~~~~~~~~l~s~~~d- 137 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ-----CIKHYVGHG-------NAINELKFHPRDPNLLLSVSKD- 137 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC-----EEEEEESCC-------SCEEEEEECSSCTTEEEEEETT-
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce-----EeeeecCCC-------CcEEEEEECCCCCCEEEEEeCC-
Confidence 3555555 44 4455543 467777754432 233444442 2233344444 56677777765
Q ss_pred CCCCCCcEEEEeCCCCcEEEEE---eccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEeccc
Q 047036 328 GKPQAPGVQQLDIETGKIVTEW---KFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVK 404 (634)
Q Consensus 328 ~~~~~~TIrlWDleTGK~V~~l---kgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~g 404 (634)
++|++||+.+|+.+..+ .+|...| ..++|+|+ +..+++|+.|++|++||++.+.. +..+..
T Consensus 138 -----g~i~iwd~~~~~~~~~~~~~~~~~~~v--~~~~~~~~--------~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~ 201 (366)
T 3k26_A 138 -----HALRLWNIQTDTLVAIFGGVEGHRDEV--LSADYDLL--------GEKIMSCGMDHSLKLWRINSKRM-MNAIKE 201 (366)
T ss_dssp -----SCEEEEETTTTEEEEEECSTTSCSSCE--EEEEECTT--------SSEEEEEETTSCEEEEESCSHHH-HHHHHH
T ss_pred -----CeEEEEEeecCeEEEEecccccccCce--eEEEECCC--------CCEEEEecCCCCEEEEECCCCcc-ccccce
Confidence 79999999999999999 7899876 46699998 67999999999999999997532 222211
Q ss_pred CCC-----Cccccc--------cccccccCcceEEEEECCCCeEEEEECCCcEEEEecccccc-------------cccc
Q 047036 405 GDS-----PVLHWT--------QGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQ-------------AKTA 458 (634)
Q Consensus 405 h~s-----~V~~~~--------~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~-------------akt~ 458 (634)
+.. ..+... ......+...+.+++++ +.+|++|+.||.|++||+.+++. ....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 280 (366)
T 3k26_A 202 SYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGR 280 (366)
T ss_dssp HHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEE
T ss_pred eEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheecc
Confidence 000 000000 00000033456788888 44999999999999999876531 2456
Q ss_pred ccCCCCCeEEEEECCC--CCEEEE-EcCCcEEEEEcc
Q 047036 459 FPGLGSPITHVDVTYD--GKWILG-TTDTYLILICTL 492 (634)
Q Consensus 459 L~GH~d~ItsVdfSpD--Gk~LlS-S~D~tIrLWD~~ 492 (634)
+.+|..+|++|+|+|| |++|++ +.|++|+|||+.
T Consensus 281 ~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~ 317 (366)
T 3k26_A 281 FDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLE 317 (366)
T ss_dssp EECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECC
T ss_pred ccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECC
Confidence 7789999999999999 999999 889999999986
No 66
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=4.6e-22 Score=222.60 Aligned_cols=251 Identities=10% Similarity=0.088 Sum_probs=163.4
Q ss_pred EEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCC
Q 047036 258 SLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAP 333 (634)
Q Consensus 258 ~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~ 333 (634)
+.++.+ +|+.+++.| ..|.||....+. ....+.+|. .+...+.++.++++|++++.| +
T Consensus 433 v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~-----~~~~~~~h~-------~~v~~~~~s~~~~~l~s~s~D------~ 494 (694)
T 3dm0_A 433 VEDVVLSSDGQFALSGSWDGELRLWDLAAGV-----STRRFVGHT-------KDVLSVAFSLDNRQIVSASRD------R 494 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTE-----EEEEEECCS-------SCEEEEEECTTSSCEEEEETT------S
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCc-----ceeEEeCCC-------CCEEEEEEeCCCCEEEEEeCC------C
Confidence 445555 566666554 356666654321 223344542 123334445556677888775 7
Q ss_pred cEEEEeCCCCcEEEEE----eccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCc
Q 047036 334 GVQQLDIETGKIVTEW----KFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPV 409 (634)
Q Consensus 334 TIrlWDleTGK~V~~l----kgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V 409 (634)
+|++||+..+. ...+ .+|...| ..++|+|++. ...+++|+.|++|++||++... ++..+.+|...
T Consensus 495 ~i~iwd~~~~~-~~~~~~~~~~h~~~v--~~~~~~~~~~------~~~l~s~s~d~~v~vwd~~~~~-~~~~~~~h~~~- 563 (694)
T 3dm0_A 495 TIKLWNTLGEC-KYTISEGGEGHRDWV--SCVRFSPNTL------QPTIVSASWDKTVKVWNLSNCK-LRSTLAGHTGY- 563 (694)
T ss_dssp CEEEECTTSCE-EEEECSSTTSCSSCE--EEEEECSCSS------SCEEEEEETTSCEEEEETTTCC-EEEEECCCSSC-
T ss_pred EEEEEECCCCc-ceeeccCCCCCCCcE--EEEEEeCCCC------cceEEEEeCCCeEEEEECCCCc-EEEEEcCCCCC-
Confidence 99999987544 3333 4788876 5669999832 2589999999999999999764 45677766543
Q ss_pred cccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEEEcCCcEEE
Q 047036 410 LHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLIL 488 (634)
Q Consensus 410 ~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlSS~D~tIrL 488 (634)
+++++++|+| +||+||.||+|||||+.+++ ....+.. ...|.+|+|||+|.+|+++.|+.|+|
T Consensus 564 --------------v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~-~~~~~~~-~~~v~~~~~sp~~~~l~~~~~~~i~i 627 (694)
T 3dm0_A 564 --------------VSTVAVSPDGSLCASGGKDGVVLLWDLAEGK-KLYSLEA-NSVIHALCFSPNRYWLCAATEHGIKI 627 (694)
T ss_dssp --------------EEEEEECTTSSEEEEEETTSBCEEEETTTTE-EEECCBC-SSCEEEEEECSSSSEEEEEETTEEEE
T ss_pred --------------EEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-eEEEecC-CCcEEEEEEcCCCcEEEEEcCCCEEE
Confidence 5789999999 79999999999999998864 5556654 56899999999999999988999999
Q ss_pred EEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeCh
Q 047036 489 ICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQ 566 (634)
Q Consensus 489 WD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~ 566 (634)
||+. .++.+..+..+...... ......|.... ...+..+...|++. | ...++++.|+.|.||++.
T Consensus 628 wd~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~l~~spd---g--~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 628 WDLE----SKSIVEDLKVDLKAEAE--KADNSGPAATK--RKVIYCTSLNWSAD---G--STLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EETT----TTEEEEEECCCCC--------------------CCCCEEEEEECTT---S--SEEEEEETTSEEEEEEC-
T ss_pred EECC----CCCChhhhccccccccc--cccccccccCC--ceeEEeeeEEEcCC---C--CEEEEEcCCCeEEEEecc
Confidence 9986 57777777655431100 00000000000 01112233445541 3 334444789999999985
No 67
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.90 E-value=2.3e-21 Score=191.40 Aligned_cols=191 Identities=17% Similarity=0.225 Sum_probs=144.5
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQA 332 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~ 332 (634)
...++.+ +|+.+++.| ..|.+|........ ....+..|. .+...+.+++++++|++++.+
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~---~~~~~~~~~-------~~i~~~~~~~~~~~l~~~~~d------ 162 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR---IKAELTSSA-------PACYALAISPDSKVCFSCCSD------ 162 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--E---EEEEEECSS-------SCEEEEEECTTSSEEEEEETT------
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcc---eeeecccCC-------CceEEEEECCCCCEEEEEeCC------
Confidence 4666777 677666643 47888886543211 122333331 122334445556677777665
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
++|++||+.+++.+..+.+|...| ..++|+|+ +..+++|+.|++|++||++.+.. +..+.
T Consensus 163 g~v~~~d~~~~~~~~~~~~~~~~i--~~~~~~~~--------~~~l~~~~~dg~i~~~d~~~~~~-~~~~~--------- 222 (337)
T 1gxr_A 163 GNIAVWDLHNQTLVRQFQGHTDGA--SCIDISND--------GTKLWTGGLDNTVRSWDLREGRQ-LQQHD--------- 222 (337)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCE--EEEEECTT--------SSEEEEEETTSEEEEEETTTTEE-EEEEE---------
T ss_pred CcEEEEeCCCCceeeeeecccCce--EEEEECCC--------CCEEEEEecCCcEEEEECCCCce-Eeeec---------
Confidence 689999999999999999999876 46699998 67999999999999999997643 33332
Q ss_pred ccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEE
Q 047036 413 TQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILIC 490 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD 490 (634)
....+.+++++|+| +||+|+.||.|++||+.+.+ ...+.+|..+|++++|+|||++|++ +.|++|++||
T Consensus 223 -------~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 293 (337)
T 1gxr_A 223 -------FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWR 293 (337)
T ss_dssp -------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred -------CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC--eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEE
Confidence 22346889999998 79999999999999988753 4567899999999999999999999 8899999999
Q ss_pred cc
Q 047036 491 TL 492 (634)
Q Consensus 491 ~~ 492 (634)
+.
T Consensus 294 ~~ 295 (337)
T 1gxr_A 294 TP 295 (337)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 68
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.90 E-value=4.1e-22 Score=203.20 Aligned_cols=217 Identities=10% Similarity=0.043 Sum_probs=147.9
Q ss_pred CcEEEeeeCCCeEEEec--CeeeEEEccCCce-ecceeEEEecCCC-CCcccccCcceeeEEeCCc---ceEEecCCCCC
Q 047036 256 VQSLTLGALDNSFLVSD--LGLQVYRNYNRGI-HNKGVSVRFDGGS-SKIGSNSTPKKALLMRGET---NMMLMSPLKDG 328 (634)
Q Consensus 256 ~~~LavG~~D~sfvv~G--~~igV~k~~~~gl-~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~---~mllsss~d~~ 328 (634)
..+.++.+..+.+++.+ ..|.||....... .-......+.+|. ++....|+|+. ..++ ++|++++.|
T Consensus 17 ~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~~g~~~~~l~s~~~d-- 90 (397)
T 1sq9_A 17 ADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAI----ERDAFELCLVATTSFS-- 90 (397)
T ss_dssp SCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEE----ETTTEEEEEEEEEETT--
T ss_pred cCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEeccc----ccCCccccEEEEEcCC--
Confidence 34677777334333332 5888998755430 0001233444542 22344444441 1115 667777665
Q ss_pred CCCCCcEEEEeCCCCcE-----EEEEecc-----CCCcceeEEEEe----cCCCCCCCCCCCE-EEEEeCCCeEEEEEcC
Q 047036 329 KPQAPGVQQLDIETGKI-----VTEWKFE-----KDGTDITMRDIT----NDTKSSQLDPSES-TFLGLDDNRLCQWDMR 393 (634)
Q Consensus 329 ~~~~~TIrlWDleTGK~-----V~~lkgH-----~~~V~I~vvsfs----Pd~K~~q~~~g~~-laSGS~D~tIklWD~R 393 (634)
++|++||+.+++. +..+.+| ...| ..++|+ |+ +.. +++|+.|++|++||++
T Consensus 91 ----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~--------~~~~l~~~~~dg~i~iwd~~ 156 (397)
T 1sq9_A 91 ----GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSF--WALKWGASNDRL--------LSHRLVATDVKGTTYIWKFH 156 (397)
T ss_dssp ----SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCE--EEEEEECCC------------CEEEEEEETTSCEEEEEEE
T ss_pred ----CCEEEEEccCCcccccccceeecccccccCCCcE--EEEEEeeccCCC--------CceEEEEEeCCCcEEEEeCC
Confidence 6899999999998 9999999 4655 566999 87 678 9999999999999998
Q ss_pred C------CCceEE-----ecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccC-
Q 047036 394 D------RSGIVQ-----NMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPG- 461 (634)
Q Consensus 394 ~------~~~~Vq-----~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~G- 461 (634)
. +..+ . .+.++.. ....+...+.+++++|+|.||+|+.||.|++||+.+.+ ....+.+
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~ 226 (397)
T 1sq9_A 157 PFADESNSLTL-NWSPTLELQGTVE--------SPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLR-PLYNFESQ 226 (397)
T ss_dssp SSSSHHHHTTT-CCCCEEEEEEEEC--------CSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTE-EEEEEECC
T ss_pred cccccccccee-eccCcceeeeeec--------cccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCc-eeEEEecc
Confidence 7 4332 2 2311000 00012345688999998888999999999999998764 6677888
Q ss_pred --C---CCCeEEEEECCCCCEEEE-EcC---CcEEEEEcccccCCCCeeeeecC
Q 047036 462 --L---GSPITHVDVTYDGKWILG-TTD---TYLILICTLFSDKDGKTKTGFSG 506 (634)
Q Consensus 462 --H---~d~ItsVdfSpDGk~LlS-S~D---~tIrLWD~~~~~~~G~~~~gF~g 506 (634)
| ..+|++|+|+|+|++|++ +.| +.|+|||+. +++.+..|.+
T Consensus 227 ~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~----~~~~~~~~~~ 276 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETE----FGERIGSLSV 276 (397)
T ss_dssp C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETT----TCCEEEEECB
T ss_pred ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECC----CCcccceecc
Confidence 9 999999999999999999 888 999999986 5777777765
No 69
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.90 E-value=1.2e-21 Score=203.87 Aligned_cols=211 Identities=12% Similarity=0.089 Sum_probs=157.1
Q ss_pred eeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEE
Q 047036 310 ALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQ 389 (634)
Q Consensus 310 ~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIkl 389 (634)
.+.+++++++|++++.| ++|++||+++++.++++.+|...| ..++|+ +..+++|+.|++|++
T Consensus 139 ~v~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~v--~~~~~~----------~~~l~~~~~dg~i~i 200 (401)
T 4aez_A 139 SVKWSHDGSFLSVGLGN------GLVDIYDVESQTKLRTMAGHQARV--GCLSWN----------RHVLSSGSRSGAIHH 200 (401)
T ss_dssp EEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECCCSSCE--EEEEEE----------TTEEEEEETTSEEEE
T ss_pred EEEECCCCCEEEEECCC------CeEEEEECcCCeEEEEecCCCCce--EEEEEC----------CCEEEEEcCCCCEEE
Confidence 34444455677777665 689999999999999999999876 344664 469999999999999
Q ss_pred EEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEE
Q 047036 390 WDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITH 468 (634)
Q Consensus 390 WD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~Its 468 (634)
||++.....+..+.+|.. .+.+++++++| +||+|+.||+|++||+.+. .....+.+|..+|++
T Consensus 201 ~d~~~~~~~~~~~~~~~~---------------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~v~~ 264 (401)
T 4aez_A 201 HDVRIANHQIGTLQGHSS---------------EVCGLAWRSDGLQLASGGNDNVVQIWDARSS-IPKFTKTNHNAAVKA 264 (401)
T ss_dssp EETTSSSCEEEEEECCSS---------------CEEEEEECTTSSEEEEEETTSCEEEEETTCS-SEEEEECCCSSCCCE
T ss_pred EecccCcceeeEEcCCCC---------------CeeEEEEcCCCCEEEEEeCCCeEEEccCCCC-CccEEecCCcceEEE
Confidence 999966655667765544 36789999998 7999999999999999876 366778899999999
Q ss_pred EEECCCCCEEEE-E---cCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCccccccccccccc
Q 047036 469 VDVTYDGKWILG-T---TDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTE 544 (634)
Q Consensus 469 VdfSpDGk~LlS-S---~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~ 544 (634)
|+|+|+|..|++ + .|++|++||+. +++.+..+..+.. + ..+.|+|.
T Consensus 265 ~~~~p~~~~ll~~~~gs~d~~i~i~d~~----~~~~~~~~~~~~~---------------v----~~~~~s~~------- 314 (401)
T 4aez_A 265 VAWCPWQSNLLATGGGTMDKQIHFWNAA----TGARVNTVDAGSQ---------------V----TSLIWSPH------- 314 (401)
T ss_dssp EEECTTSTTEEEEECCTTTCEEEEEETT----TCCEEEEEECSSC---------------E----EEEEECSS-------
T ss_pred EEECCCCCCEEEEecCCCCCEEEEEECC----CCCEEEEEeCCCc---------------E----EEEEECCC-------
Confidence 999999877666 4 49999999986 5666555542210 0 12344433
Q ss_pred CCCCceEEEE-E--cCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 545 NGKQERHLVA-T--VGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 545 ~g~~E~~Ivt-S--tg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
+ ..|++ + .++.|.+|++.. +... ..+.+..+...|..+.|
T Consensus 315 -~---~~l~~~~g~~dg~i~v~~~~~---~~~~-----------~~~~~~~h~~~v~~~~~ 357 (401)
T 4aez_A 315 -S---KEIMSTHGFPDNNLSIWSYSS---SGLT-----------KQVDIPAHDTRVLYSAL 357 (401)
T ss_dssp -S---SEEEEEECTTTCEEEEEEEET---TEEE-----------EEEEEECCSSCCCEEEE
T ss_pred -C---CeEEEEeecCCCcEEEEecCC---ccce-----------eEEEecCCCCCEEEEEE
Confidence 2 34444 3 589999999874 2111 13467788888888887
No 70
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.90 E-value=1.5e-21 Score=204.92 Aligned_cols=248 Identities=11% Similarity=0.100 Sum_probs=173.1
Q ss_pred CcEEEeeeCCCeEEEecCeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCCCCCc
Q 047036 256 VQSLTLGALDNSFLVSDLGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPG 334 (634)
Q Consensus 256 ~~~LavG~~D~sfvv~G~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~T 334 (634)
+|.||||. |+ +|.||....+.+. ..+.+.+|. .+.+++|+|+ +++|++++.| ++
T Consensus 116 ~n~lAvgl-d~-------tV~lWd~~tg~~~---~~~~~~~~~~~V~sv~fspd--------g~~lasgs~D------g~ 170 (420)
T 4gga_A 116 GNVLAVAL-DN-------SVYLWSASSGDIL---QLLQMEQPGEYISSVAWIKE--------GNYLAVGTSS------AE 170 (420)
T ss_dssp TSEEEEEE-TT-------EEEEEETTTCCEE---EEEECCSTTCCEEEEEECTT--------SSEEEEEETT------SC
T ss_pred CCEEEEEe-CC-------EEEEEECCCCCEE---EEEEecCCCCcEEEEEECCC--------CCEEEEEECC------Ce
Confidence 35777775 44 4566654443211 122233331 2355666655 4566777765 79
Q ss_pred EEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccccc
Q 047036 335 VQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQ 414 (634)
Q Consensus 335 IrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~ 414 (634)
|++||+++|++++++.+|...| .+++++ +..+++|+.|+++++||.+.....+..+.+|...
T Consensus 171 v~iWd~~~~~~~~~~~~h~~~v----~~~s~~--------~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~------ 232 (420)
T 4gga_A 171 VQLWDVQQQKRLRNMTSHSARV----GSLSWN--------SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE------ 232 (420)
T ss_dssp EEEEETTTTEEEEEECCCSSCE----EEEEEE--------TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC------
T ss_pred EEEEEcCCCcEEEEEeCCCCce----EEEeeC--------CCEEEEEeCCCceeEeeecccceeeEEecccccc------
Confidence 9999999999999999999854 356665 5799999999999999999877667777766543
Q ss_pred ccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccc---ccccccCCCCCeEEEEECCCCCEEEE----EcCCcE
Q 047036 415 GHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQ---AKTAFPGLGSPITHVDVTYDGKWILG----TTDTYL 486 (634)
Q Consensus 415 g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~---akt~L~GH~d~ItsVdfSpDGk~LlS----S~D~tI 486 (634)
+.+++++++| +|++|+.||.|+|||..+++. ....+.+|..+|.+++|+|++..+++ +.|++|
T Consensus 233 ---------~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I 303 (420)
T 4gga_A 233 ---------VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHI 303 (420)
T ss_dssp ---------EEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEE
T ss_pred ---------eeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEE
Confidence 4677889988 899999999999999876531 23456689999999999998876654 259999
Q ss_pred EEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEE--cCCeEEEEe
Q 047036 487 ILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVAT--VGKFSVIWD 564 (634)
Q Consensus 487 rLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtS--tg~~viiWd 564 (634)
+|||+. +|+++..+..|.. . ..+.|.+. + ...++++ .++.|+|||
T Consensus 304 ~iwd~~----t~~~~~~~~~~~~-----------------v--~~~~~~~~--------~--~~lv~~sg~~d~~I~iwd 350 (420)
T 4gga_A 304 RIWNVC----SGACLSAVDAHSQ-----------------V--CSILWSPH--------Y--KELISGHGFAQNQLVIWK 350 (420)
T ss_dssp EEEETT----TTEEEEEEECSSC-----------------E--EEEEEETT--------T--TEEEEEECTTTCCEEEEE
T ss_pred EEEeCC----ccccceeeccccc-----------------e--eeeeecCC--------C--CeEEEEEecCCCEEEEEE
Confidence 999986 5766665554431 0 11223322 2 2344443 578999999
Q ss_pred ChhhhcccccccccccCCcceeeEEEeccCCCeeeecccc
Q 047036 565 FQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMH 604 (634)
Q Consensus 565 l~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~~ 604 (634)
+.. ++. ...+..|...|..+.|-.
T Consensus 351 ~~~---~~~-------------v~~l~gH~~~V~~l~~sp 374 (420)
T 4gga_A 351 YPT---MAK-------------VAELKGHTSRVLSLTMSP 374 (420)
T ss_dssp TTT---CCE-------------EEEECCCSSCEEEEEECT
T ss_pred CCC---CcE-------------EEEEcCCCCCEEEEEEcC
Confidence 863 322 257888999999999833
No 71
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.4e-22 Score=205.77 Aligned_cols=249 Identities=12% Similarity=0.097 Sum_probs=176.5
Q ss_pred CcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCC
Q 047036 256 VQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKP 330 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~ 330 (634)
....++.+ +|+.+++.| ..|.||...... .+......+.+|. .+...+|+|+ +.++|++++.|
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~-------~~~~l~s~~~d---- 135 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALDNGSLELYSTNEAN-NAINSMARFSNHSSSVKTVKFNAK-------QDNVLASGGNN---- 135 (416)
T ss_dssp SCEEEEEECSSSSCEEEEESSSCEEEECCSSTT-SCCCEEEECCCSSSCCCEEEECSS-------STTBEEEECSS----
T ss_pred CceEEEEECCCCCeEEEEccCCeEEEeeccccc-ccccchhhccCCccceEEEEEcCC-------CCCEEEEEcCC----
Confidence 34777777 788777765 478899865411 1111334455552 2244444443 15667777765
Q ss_pred CCCcEEEEeCCCCc------EE---EEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEe
Q 047036 331 QAPGVQQLDIETGK------IV---TEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQN 401 (634)
Q Consensus 331 ~~~TIrlWDleTGK------~V---~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~ 401 (634)
++|++||+.+++ .. ..+.+|...| ..++|+|++ +.++++|+.|++|++||++.+.. +..
T Consensus 136 --g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~-------~~~l~~~~~dg~v~iwd~~~~~~-~~~ 203 (416)
T 2pm9_A 136 --GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEV--ISLAWNQSL-------AHVFASAGSSNFASIWDLKAKKE-VIH 203 (416)
T ss_dssp --SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCC--CEEEECSSC-------TTEEEEESSSSCEEEEETTTTEE-EEE
T ss_pred --CeEEEEECCCCccccccccccccccccCCCCCe--eEEEeCCCC-------CcEEEEEcCCCCEEEEECCCCCc-ceE
Confidence 799999999987 33 3357898876 456999972 36899999999999999998653 455
Q ss_pred cccCCCCccccccccccccCcceEEEEECCCC--eEEEEECCC---cEEEEecccccccccccc-CCCCCeEEEEECC-C
Q 047036 402 MVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG--SIVVGSLDG---KIRLYSKTSMRQAKTAFP-GLGSPITHVDVTY-D 474 (634)
Q Consensus 402 l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG--~IASGS~DG---tIRLWD~~t~r~akt~L~-GH~d~ItsVdfSp-D 474 (634)
+..|... .+ +...+.+++++|+| .||+|+.|+ .|++||+.+.+.....+. +|..+|++|+|+| +
T Consensus 204 ~~~~~~~-----~~----~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 274 (416)
T 2pm9_A 204 LSYTSPN-----SG----IKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQD 274 (416)
T ss_dssp ECCCCCS-----SC----CCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSC
T ss_pred Eeccccc-----cc----cCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCC
Confidence 5433210 01 13467899999987 699999999 999999987544667788 9999999999999 9
Q ss_pred CCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEE
Q 047036 475 GKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLV 553 (634)
Q Consensus 475 Gk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~Iv 553 (634)
|++|++ +.|++|+|||+. +++.+..|.+|.+.. ..+.|+|. + ...|+
T Consensus 275 ~~~l~s~~~dg~v~~wd~~----~~~~~~~~~~~~~~v------------------~~~~~s~~--------~--~~~l~ 322 (416)
T 2pm9_A 275 EHLLLSSGRDNTVLLWNPE----SAEQLSQFPARGNWC------------------FKTKFAPE--------A--PDLFA 322 (416)
T ss_dssp SSCEEEEESSSEEEEECSS----SCCEEEEEECSSSCC------------------CCEEECTT--------C--TTEEE
T ss_pred CCeEEEEeCCCCEEEeeCC----CCccceeecCCCCce------------------EEEEECCC--------C--CCEEE
Confidence 999999 889999999986 577777777765311 23455544 1 13555
Q ss_pred E-EcCCeEEEEeChhhh
Q 047036 554 A-TVGKFSVIWDFQQVK 569 (634)
Q Consensus 554 t-Stg~~viiWdl~~v~ 569 (634)
+ +.|+.|.+|++....
T Consensus 323 s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 323 CASFDNKIEVQTLQNLT 339 (416)
T ss_dssp ECCSSSEEEEEESCCCC
T ss_pred EEecCCcEEEEEccCCC
Confidence 4 779999999997543
No 72
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=2.2e-21 Score=204.16 Aligned_cols=268 Identities=14% Similarity=0.201 Sum_probs=185.0
Q ss_pred EEEeeeCCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCCc
Q 047036 258 SLTLGALDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPG 334 (634)
Q Consensus 258 ~LavG~~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~T 334 (634)
+.++.+ |+.+++.| ..|.||...... ....+.+|. .+...+.+ ++++|++++.| ++
T Consensus 136 v~~~~~-d~~~l~~g~~dg~i~iwd~~~~~-----~~~~~~~h~-------~~v~~l~~--~~~~l~sg~~d------g~ 194 (435)
T 1p22_A 136 VYCLQY-DDQKIVSGLRDNTIKIWDKNTLE-----CKRILTGHT-------GSVLCLQY--DERVIITGSSD------ST 194 (435)
T ss_dssp EEEEEC-CSSEEEEEESSSCEEEEESSSCC-----EEEEECCCS-------SCEEEEEC--CSSEEEEEETT------SC
T ss_pred EEEEEE-CCCEEEEEeCCCeEEEEeCCCCe-----EEEEEcCCC-------CcEEEEEE--CCCEEEEEcCC------Ce
Confidence 455555 56666654 588899865432 233455552 12233333 56778888775 79
Q ss_pred EEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCce--EEecccCCCCcccc
Q 047036 335 VQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGI--VQNMVKGDSPVLHW 412 (634)
Q Consensus 335 IrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~--Vq~l~gh~s~V~~~ 412 (634)
|++||+.+|+++.++.+|...| ..++|++ ..+++|+.|++|++||++++... ...+.+|..
T Consensus 195 i~vwd~~~~~~~~~~~~h~~~v--~~l~~~~----------~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~----- 257 (435)
T 1p22_A 195 VRVWDVNTGEMLNTLIHHCEAV--LHLRFNN----------GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA----- 257 (435)
T ss_dssp EEEEESSSCCEEEEECCCCSCE--EEEECCT----------TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS-----
T ss_pred EEEEECCCCcEEEEEcCCCCcE--EEEEEcC----------CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCC-----
Confidence 9999999999999999999875 3446653 58999999999999999976532 144444443
Q ss_pred ccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEc
Q 047036 413 TQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICT 491 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~ 491 (634)
.+.++++ .+.+||+|+.||+|++||+.+++ ....+.+|..+|.++++ +|++|++ +.|++|+|||+
T Consensus 258 ----------~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~ 323 (435)
T 1p22_A 258 ----------AVNVVDF-DDKYIVSASGDRTIKVWNTSTCE-FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDI 323 (435)
T ss_dssp ----------CEEEEEE-ETTEEEEEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEET
T ss_pred ----------cEEEEEe-CCCEEEEEeCCCeEEEEECCcCc-EEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEEC
Confidence 3567777 33489999999999999998874 77889999999999999 5789999 89999999998
Q ss_pred ccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChhhhcc
Q 047036 492 LFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNS 571 (634)
Q Consensus 492 ~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~v~~~ 571 (634)
. +|+++..|.+|.... ..+.| + + ...++++.|+.|.+||+..-...
T Consensus 324 ~----~~~~~~~~~~h~~~v------------------~~~~~-----~-----~--~~l~sg~~dg~i~vwd~~~~~~~ 369 (435)
T 1p22_A 324 E----CGACLRVLEGHEELV------------------RCIRF-----D-----N--KRIVSGAYDGKIKVWDLVAALDP 369 (435)
T ss_dssp T----TCCEEEEECCCSSCE------------------EEEEC-----C-----S--SEEEEEETTSCEEEEEHHHHTST
T ss_pred C----CCCEEEEEeCCcCcE------------------EEEEe-----c-----C--CEEEEEeCCCcEEEEECCCCCCc
Confidence 6 688888888775311 11222 2 2 24555578999999999754321
Q ss_pred cccccccccCCcceeeEEEeccCCCeeeeccccCccccCCCCCCCEEE
Q 047036 572 AHECYRNQQGLKSCYCYKIVLKDESIVESRFMHDKFAVTDSPEAPLVV 619 (634)
Q Consensus 572 ~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~~d~f~~~~~~~~~iiv 619 (634)
... ....| ...+..+...|..+.| .+++.+.++.|..|.|
T Consensus 370 ~~~------~~~~~-~~~~~~h~~~v~~l~~-~~~~l~s~s~Dg~i~i 409 (435)
T 1p22_A 370 RAP------AGTLC-LRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILI 409 (435)
T ss_dssp TSC------TTTTE-EEEECCCSSCCCCEEE-CSSCEEECCSSSEEEE
T ss_pred ccc------ccchh-eeeccCCCCCeEEEEe-CCCEEEEEeCCCEEEE
Confidence 110 00112 3567888999998888 5555444433444443
No 73
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.90 E-value=5.7e-22 Score=201.49 Aligned_cols=277 Identities=13% Similarity=0.143 Sum_probs=181.1
Q ss_pred cEEEeee-CCCe-EEEec---CeeeEEEc----cCCceecce-eEEEecC----CCCCcccccCcceeeEEeCCcceEEe
Q 047036 257 QSLTLGA-LDNS-FLVSD---LGLQVYRN----YNRGIHNKG-VSVRFDG----GSSKIGSNSTPKKALLMRGETNMMLM 322 (634)
Q Consensus 257 ~~LavG~-~D~s-fvv~G---~~igV~k~----~~~gl~~~~-~~~~~~~----~~~~~g~~fsP~~~mL~~~D~~mlls 322 (634)
...++.+ +|+. +++.| ..|.||.. ..+...+.. ....+.. +.. .+..-.+...+.+++++++|++
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~ 125 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSAS-SGKTTNQVTCLAWSHDGNSIVT 125 (425)
T ss_dssp CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC-------CBCEEEEEECTTSSEEEE
T ss_pred ceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccccc-ccCCCCceEEEEEcCCCCEEEE
Confidence 3556667 6776 77754 57889987 443210000 1111211 000 0001124455666667777888
Q ss_pred cCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEec
Q 047036 323 SPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNM 402 (634)
Q Consensus 323 ss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l 402 (634)
++.| ++|++|| .+|+.+..+.+|...| ..++|+|+ +..+++|+.|++|++||++++. .++.+
T Consensus 126 ~~~d------g~i~i~~-~~~~~~~~~~~~~~~v--~~~~~~~~--------~~~l~~~~~d~~i~iwd~~~~~-~~~~~ 187 (425)
T 1r5m_A 126 GVEN------GELRLWN-KTGALLNVLNFHRAPI--VSVKWNKD--------GTHIISMDVENVTILWNVISGT-VMQHF 187 (425)
T ss_dssp EETT------SCEEEEE-TTSCEEEEECCCCSCE--EEEEECTT--------SSEEEEEETTCCEEEEETTTTE-EEEEE
T ss_pred EeCC------CeEEEEe-CCCCeeeeccCCCccE--EEEEECCC--------CCEEEEEecCCeEEEEECCCCc-EEEEe
Confidence 7765 6899999 6799999999999976 46699998 6799999999999999998764 35555
Q ss_pred ccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-E
Q 047036 403 VKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-T 481 (634)
Q Consensus 403 ~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S 481 (634)
..|..................+.++++++++.+++|+.||.|++||+.+. .....+.+|..+|++|+|+|+|++|++ +
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 266 (425)
T 1r5m_A 188 ELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEK-TPTGKLIGHHGPISVLEFNDTNKLLLSAS 266 (425)
T ss_dssp CCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCS-SCSEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred eccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCC-ceeeeeccCCCceEEEEECCCCCEEEEEc
Confidence 44332100000000000111256778888999999999999999999886 366788899999999999999999999 8
Q ss_pred cCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEE
Q 047036 482 TDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSV 561 (634)
Q Consensus 482 ~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~vi 561 (634)
.|++|++||+. .++.+..|.+|.... ..+.|+|. + ..++++.++.|.
T Consensus 267 ~d~~i~i~d~~----~~~~~~~~~~~~~~i------------------~~~~~~~~--------~---~l~~~~~d~~i~ 313 (425)
T 1r5m_A 267 DDGTLRIWHGG----NGNSQNCFYGHSQSI------------------VSASWVGD--------D---KVISCSMDGSVR 313 (425)
T ss_dssp TTSCEEEECSS----SBSCSEEECCCSSCE------------------EEEEEETT--------T---EEEEEETTSEEE
T ss_pred CCCEEEEEECC----CCccceEecCCCccE------------------EEEEECCC--------C---EEEEEeCCCcEE
Confidence 89999999976 455555555443210 12334333 2 455668899999
Q ss_pred EEeChhhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 562 IWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 562 iWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
+||+.. ++. ...+..+...|..+.|
T Consensus 314 i~d~~~---~~~-------------~~~~~~~~~~i~~~~~ 338 (425)
T 1r5m_A 314 LWSLKQ---NTL-------------LALSIVDGVPIFAGRI 338 (425)
T ss_dssp EEETTT---TEE-------------EEEEECTTCCEEEEEE
T ss_pred EEECCC---CcE-------------eEecccCCccEEEEEE
Confidence 999863 222 1356667778887777
No 74
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.90 E-value=1.1e-22 Score=214.66 Aligned_cols=154 Identities=9% Similarity=0.064 Sum_probs=118.6
Q ss_pred cccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCc--EEEEEeccCCCcceeEEEEecCCCCCCCCCCCEE
Q 047036 301 IGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGK--IVTEWKFEKDGTDITMRDITNDTKSSQLDPSEST 378 (634)
Q Consensus 301 ~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK--~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~l 378 (634)
.+.+|+|. +.++|++++.| ++|++||+.+++ .+.++.||.+.| ..++|+|.. +.+|
T Consensus 123 ~~l~~~P~-------~~~~lasGs~d------g~i~lWd~~~~~~~~~~~~~gH~~~V--~~l~f~p~~-------~~~l 180 (435)
T 4e54_B 123 TSLAWHPT-------HPSTVAVGSKG------GDIMLWNFGIKDKPTFIKGIGAGGSI--TGLKFNPLN-------TNQF 180 (435)
T ss_dssp EEEEECSS-------CTTCEEEEETT------SCEEEECSSCCSCCEEECCCSSSCCC--CEEEECSSC-------TTEE
T ss_pred EEEEEeCC-------CCCEEEEEeCC------CEEEEEECCCCCceeEEEccCCCCCE--EEEEEeCCC-------CCEE
Confidence 44555553 34567777765 799999998875 455677999987 456999841 5799
Q ss_pred EEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccc
Q 047036 379 FLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKT 457 (634)
Q Consensus 379 aSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt 457 (634)
+|||.|++|++||++.+. ++.+..+.. ....+.+++++++| +||+|+.||+|+|||+.+ + ...
T Consensus 181 ~s~s~D~~v~iwd~~~~~--~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~-~~~ 244 (435)
T 4e54_B 181 YASSMEGTTRLQDFKGNI--LRVFASSDT------------INIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-K-ELW 244 (435)
T ss_dssp EEECSSSCEEEEETTSCE--EEEEECCSS------------CSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-C-BCC
T ss_pred EEEeCCCEEEEeeccCCc--eeEEeccCC------------CCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-c-eeE
Confidence 999999999999998642 233322211 12345678899998 899999999999999876 3 567
Q ss_pred cccCCCCCeEEEEECCCCCE-EEE-EcCCcEEEEEcc
Q 047036 458 AFPGLGSPITHVDVTYDGKW-ILG-TTDTYLILICTL 492 (634)
Q Consensus 458 ~L~GH~d~ItsVdfSpDGk~-LlS-S~D~tIrLWD~~ 492 (634)
.+.+|..+|++|+|+|+|.+ |++ +.|++|+|||++
T Consensus 245 ~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~ 281 (435)
T 4e54_B 245 NLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLR 281 (435)
T ss_dssp CSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETT
T ss_pred EEecccceEEeeeecCCCceEEEEecCcceeeEEecc
Confidence 88999999999999999985 556 789999999986
No 75
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.90 E-value=8.9e-22 Score=192.76 Aligned_cols=215 Identities=10% Similarity=0.044 Sum_probs=149.6
Q ss_pred CcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCC
Q 047036 256 VQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKP 330 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~ 330 (634)
..+.++.+ +|+.+++.| ..|.||......... .....+.+|. ++.+.+|+|. .++++|++++.|
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~------~d~~~l~s~~~d---- 80 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNW-ELSDSWRAHDSSIVAIDWASP------EYGRIIASASYD---- 80 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCE-EEEEEEECCSSCEEEEEECCG------GGCSEEEEEETT----
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcc-eecceeccCCCcEEEEEEcCC------CCCCEEEEEcCC----
Confidence 34777888 788877765 479999875543111 1233444552 2244444442 145677777765
Q ss_pred CCCcEEEEeCCCC---------cEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEe
Q 047036 331 QAPGVQQLDIETG---------KIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQN 401 (634)
Q Consensus 331 ~~~TIrlWDleTG---------K~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~ 401 (634)
++|++||+.++ +.+..+.+|...| ..++|+|+.. +..+++|+.|++|++||++.+..+ +.
T Consensus 81 --g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~------~~~l~~~~~dg~v~iwd~~~~~~~-~~ 149 (351)
T 3f3f_A 81 --KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSL--YSVKFAPAHL------GLKLACLGNDGILRLYDALEPSDL-RS 149 (351)
T ss_dssp --SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCE--EEEEECCGGG------CSEEEEEETTCEEEEEECSSTTCT-TC
T ss_pred --CeEEEEecCCCcccccccCcceeeeecccCCce--eEEEEcCCCC------CcEEEEecCCCcEEEecCCChHHh-cc
Confidence 79999999998 7799999999976 4669999722 368999999999999999875421 11
Q ss_pred cc-------------cCCCCcc------------------------ccc--ccc-----cc-ccCcceEEEEECCCC---
Q 047036 402 MV-------------KGDSPVL------------------------HWT--QGH-----QF-SRGTNFQCFASTGDG--- 433 (634)
Q Consensus 402 l~-------------gh~s~V~------------------------~~~--~g~-----~y-~~~~~fssva~s~dG--- 433 (634)
+. +|...+. .|. .+. .+ .+...+.+++++|+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~ 229 (351)
T 3f3f_A 150 WTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRW 229 (351)
T ss_dssp CEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCS
T ss_pred ccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCc
Confidence 10 1110000 000 000 00 134568999999996
Q ss_pred --eEEEEECCCcEEEEeccccc---------------------------------------------cccccccCCCCCe
Q 047036 434 --SIVVGSLDGKIRLYSKTSMR---------------------------------------------QAKTAFPGLGSPI 466 (634)
Q Consensus 434 --~IASGS~DGtIRLWD~~t~r---------------------------------------------~akt~L~GH~d~I 466 (634)
+||+|+.||+|+|||+.... .....+.+|..+|
T Consensus 230 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (351)
T 3f3f_A 230 YQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV 309 (351)
T ss_dssp SEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCE
T ss_pred ceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccE
Confidence 69999999999999987531 2445678999999
Q ss_pred EEEEECCCCCEEEE-EcCCcEEEEEcc
Q 047036 467 THVDVTYDGKWILG-TTDTYLILICTL 492 (634)
Q Consensus 467 tsVdfSpDGk~LlS-S~D~tIrLWD~~ 492 (634)
++|+|+|||++|++ +.|++|+|||+.
T Consensus 310 ~~~~~s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 310 WSVSWNLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp EEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEEEcCCCCEEEEecCCCcEEEEecC
Confidence 99999999999999 899999999986
No 76
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.90 E-value=4.8e-22 Score=211.36 Aligned_cols=179 Identities=14% Similarity=0.102 Sum_probs=130.7
Q ss_pred CCCcEEEEeC-CCCcEEEEEeccCCCcceeEEEEec-CCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCC
Q 047036 331 QAPGVQQLDI-ETGKIVTEWKFEKDGTDITMRDITN-DTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSP 408 (634)
Q Consensus 331 ~~~TIrlWDl-eTGK~V~~lkgH~~~V~I~vvsfsP-d~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~ 408 (634)
|+++|++|++ .+|+.+.++.+|...| .+++|+| ++. ++.|+|||.|++||+||++++++ +++|.+|...
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v--~~l~fs~~~g~------~~~LaSgS~D~TIkIWDl~TGk~-l~tL~g~~~~ 225 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEE--TILTFAEVQGM------QEALLGTTIMNNIVIWNLKTGQL-LKKMHIDDSY 225 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSS--CEEEEEEEETS------TTEEEEEETTSEEEEEETTTCCE-EEEEECCC--
T ss_pred CCCcEEEEEECCCCceeeeeccCCCce--eeEEeeccCCC------CceEEEecCCCcEEEEECCCCcE-EEEEcCCCcc
Confidence 5589999999 6699999999999987 4778998 311 58999999999999999998764 6788654332
Q ss_pred ccccccccccccCcceEEEEECCCC-eE------------EEEECCCcEEEEeccccccccccc-----cCCCCCeEEEE
Q 047036 409 VLHWTQGHQFSRGTNFQCFASTGDG-SI------------VVGSLDGKIRLYSKTSMRQAKTAF-----PGLGSPITHVD 470 (634)
Q Consensus 409 V~~~~~g~~y~~~~~fssva~s~dG-~I------------ASGS~DGtIRLWD~~t~r~akt~L-----~GH~d~ItsVd 470 (634)
+ ..+.+++|+|+| +| |+|+.|++|||||..+++ ....+ .||...+.+.+
T Consensus 226 v------------~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk-~l~v~~~~~p~Gh~~~~lsg~ 292 (356)
T 2w18_A 226 Q------------ASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL-SVGVMLYCLPPGQAGRFLEGD 292 (356)
T ss_dssp -------------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE-EEEEEEECCCTTCCCCEEEEE
T ss_pred e------------eeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE-EEEEEEeeccCCCcceeEccc
Confidence 1 135677888888 33 789999999999998864 33332 38887766666
Q ss_pred ECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCc
Q 047036 471 VTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQE 549 (634)
Q Consensus 471 fSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E 549 (634)
++ |.++|| +.|++|+|||+. +|+++.+|.+|.... . ..+.|+|+ |
T Consensus 293 ~s--g~~lASgS~DgTIkIWDl~----tGk~l~tL~gH~~~v---------------v--s~vafSPD--------G--- 338 (356)
T 2w18_A 293 VK--DHCAAAILTSGTIAIWDLL----LGQCTALLPPVSDQH---------------W--SFVKWSGT--------D--- 338 (356)
T ss_dssp EE--TTEEEEEETTSCEEEEETT----TCSEEEEECCC--CC---------------C--CEEEECSS--------S---
T ss_pred cC--CCEEEEEcCCCcEEEEECC----CCcEEEEecCCCCCe---------------E--EEEEECCC--------C---
Confidence 55 999999 899999999986 799999999886421 0 11345554 4
Q ss_pred eEEEE-EcCCeEEEEeC
Q 047036 550 RHLVA-TVGKFSVIWDF 565 (634)
Q Consensus 550 ~~Ivt-Stg~~viiWdl 565 (634)
++|++ |.|+.|+|||+
T Consensus 339 ~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 339 SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SEEEEECTTSCEEEEEE
T ss_pred CEEEEEECCCcEEEecC
Confidence 45655 77999999985
No 77
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.90 E-value=3e-21 Score=202.67 Aligned_cols=248 Identities=13% Similarity=0.136 Sum_probs=171.5
Q ss_pred CcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEe--CCcceEEecCCCCCC
Q 047036 256 VQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMR--GETNMMLMSPLKDGK 329 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~--~D~~mllsss~d~~~ 329 (634)
....++.+ +++ +++.| ..|.||....+. ....+.+|. .+...+.+. .++++|++++.|
T Consensus 163 ~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~-----~~~~~~~h~-------~~v~~l~~~~~~~~~~l~s~s~d--- 226 (464)
T 3v7d_B 163 GGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC-----CTHVFEGHN-------STVRCLDIVEYKNIKYIVTGSRD--- 226 (464)
T ss_dssp SCEEEEEECSTT-EEEEEETTSCEEEEETTTTE-----EEEEECCCS-------SCEEEEEEEESSSCEEEEEEETT---
T ss_pred cCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc-----EEEEECCCC-------CccEEEEEecCCCCCEEEEEcCC---
Confidence 34666776 555 44433 478888865432 233444442 222223333 456777887765
Q ss_pred CCCCcEEEEeCCCCc-----------------------EEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCe
Q 047036 330 PQAPGVQQLDIETGK-----------------------IVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNR 386 (634)
Q Consensus 330 ~~~~TIrlWDleTGK-----------------------~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~t 386 (634)
++|++||+.+++ ++..+.+|...| .+++|+ +..+++|+.|++
T Consensus 227 ---~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~~--------~~~l~~~~~d~~ 291 (464)
T 3v7d_B 227 ---NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV----RTVSGH--------GNIVVSGSYDNT 291 (464)
T ss_dssp ---SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCE----EEEEEE--------TTEEEEEETTSC
T ss_pred ---CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceE----EEEcCC--------CCEEEEEeCCCe
Confidence 799999999887 477889998754 467777 679999999999
Q ss_pred EEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCC
Q 047036 387 LCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSP 465 (634)
Q Consensus 387 IklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ 465 (634)
|++||++++. ++..+.+|.. .+.+++++++| +||+|+.||+|++||+.+++ ....+.+|..+
T Consensus 292 i~vwd~~~~~-~~~~~~~~~~---------------~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~-~~~~~~~h~~~ 354 (464)
T 3v7d_B 292 LIVWDVAQMK-CLYILSGHTD---------------RIYSTIYDHERKRCISASMDTTIRIWDLENGE-LMYTLQGHTAL 354 (464)
T ss_dssp EEEEETTTTE-EEEEECCCSS---------------CEEEEEEETTTTEEEEEETTSCEEEEETTTTE-EEEEECCCSSC
T ss_pred EEEEECCCCc-EEEEecCCCC---------------CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc-EEEEEeCCCCc
Confidence 9999999765 4566765544 35788999998 89999999999999998874 77889999999
Q ss_pred eEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCccccccccccccc
Q 047036 466 ITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTE 544 (634)
Q Consensus 466 ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~ 544 (634)
|++|+|+ |++|++ +.|++|++||+. ++.....+ +. .+.. ..+.|.+.
T Consensus 355 v~~~~~~--~~~l~s~s~dg~v~vwd~~----~~~~~~~~--~~--------------~~~~---~~~~~~~~------- 402 (464)
T 3v7d_B 355 VGLLRLS--DKFLVSAAADGSIRGWDAN----DYSRKFSY--HH--------------TNLS---AITTFYVS------- 402 (464)
T ss_dssp EEEEEEC--SSEEEEEETTSEEEEEETT----TCCEEEEE--EC--------------TTCC---CEEEEEEC-------
T ss_pred EEEEEEc--CCEEEEEeCCCcEEEEECC----CCceeeee--cC--------------CCCc---cEEEEEeC-------
Confidence 9999998 689998 999999999975 33322211 11 0000 11233332
Q ss_pred CCCCceEEEEEcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 545 NGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 545 ~g~~E~~IvtStg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
+ ..|+++.++.|.+||++. |++-. -.+..+...|.++.|
T Consensus 403 -~---~~l~~~~dg~i~iwd~~~---g~~~~------------~~~~~~~~~v~~v~~ 441 (464)
T 3v7d_B 403 -D---NILVSGSENQFNIYNLRS---GKLVH------------ANILKDADQIWSVNF 441 (464)
T ss_dssp -S---SEEEEEETTEEEEEETTT---CCEEE------------SCTTTTCSEEEEEEE
T ss_pred -C---CEEEEecCCeEEEEECCC---CcEEe------------hhhccCCCcEEEEEe
Confidence 3 577777799999999974 33210 013445677887777
No 78
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.90 E-value=1.3e-22 Score=215.68 Aligned_cols=158 Identities=12% Similarity=0.105 Sum_probs=106.7
Q ss_pred CCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcc-eeEEEEecCCCCCCC---C-CCCEEEEEeCCCeEEE
Q 047036 315 GETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTD-ITMRDITNDTKSSQL---D-PSESTFLGLDDNRLCQ 389 (634)
Q Consensus 315 ~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~-I~vvsfsPd~K~~q~---~-~g~~laSGS~D~tIkl 389 (634)
+++.+|++++.| +|||+||+.||+++++|.+|...+. +..++|+|+++.--. + ....++||+.|++|++
T Consensus 191 g~~~~LaSgS~D------~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 191 GMQEALLGTTIM------NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp TSTTEEEEEETT------SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred CCCceEEEecCC------CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 467788888776 7999999999999999998654321 234589998542100 0 0013578999999999
Q ss_pred EEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCCCCCeE-E
Q 047036 390 WDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPIT-H 468 (634)
Q Consensus 390 WD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~It-s 468 (634)
||++++.. +..+.-. ...||. ..+.+..++ +-.+|+||.||+|||||+.+++ +..+|.||.+.|. +
T Consensus 265 Wd~~tgk~-l~v~~~~------~p~Gh~----~~~lsg~~s-g~~lASgS~DgTIkIWDl~tGk-~l~tL~gH~~~vvs~ 331 (356)
T 2w18_A 265 INPKTTLS-VGVMLYC------LPPGQA----GRFLEGDVK-DHCAAAILTSGTIAIWDLLLGQ-CTALLPPVSDQHWSF 331 (356)
T ss_dssp EETTTTEE-EEEEEEC------CCTTCC----CCEEEEEEE-TTEEEEEETTSCEEEEETTTCS-EEEEECCC--CCCCE
T ss_pred EECCCCEE-EEEEEee------ccCCCc----ceeEccccC-CCEEEEEcCCCcEEEEECCCCc-EEEEecCCCCCeEEE
Confidence 99998653 3433100 001221 113444444 2379999999999999999974 7888999998766 5
Q ss_pred EEECCCCCEEEE-EcCCcEEEEEc
Q 047036 469 VDVTYDGKWILG-TTDTYLILICT 491 (634)
Q Consensus 469 VdfSpDGk~LlS-S~D~tIrLWD~ 491 (634)
|+|||||++|+| +.|++|||||+
T Consensus 332 vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 332 VKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEECCCCCEEEEEECCCcEEEecC
Confidence 999999999999 89999999995
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.89 E-value=3.1e-21 Score=188.95 Aligned_cols=230 Identities=11% Similarity=0.122 Sum_probs=165.2
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQA 332 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~ 332 (634)
...++.+ +++.+++.| ..|.+|...... .. .....+.+|. .+...+.+ +.++|++++.|
T Consensus 61 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~-~~-~~~~~~~~~~-------~~i~~~~~--~~~~l~~~~~d------ 123 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGKDTMINGVPLFATS-GE-DPLYTLIGHQ-------GNVCSLSF--QDGVVISGSWD------ 123 (313)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTCCT-TS-CC-CEECCCS-------SCEEEEEE--ETTEEEEEETT------
T ss_pred cEEEEEECCCCCEEEEecCCCeEEEEEeeecC-CC-Ccccchhhcc-------cCEEEEEe--cCCEEEEEeCC------
Confidence 4666676 677766654 467788764421 00 1122333331 22333333 45677777765
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEec-CCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITN-DTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsP-d~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
++|++|| +++.+..+.+|...| ..++|.| + +..+++|+.|++|++||.+ ..+..+..+
T Consensus 124 ~~i~~~d--~~~~~~~~~~~~~~v--~~~~~~~~~--------~~~l~~~~~d~~i~i~d~~---~~~~~~~~~------ 182 (313)
T 3odt_A 124 KTAKVWK--EGSLVYNLQAHNASV--WDAKVVSFS--------ENKFLTASADKTIKLWQND---KVIKTFSGI------ 182 (313)
T ss_dssp SEEEEEE--TTEEEEEEECCSSCE--EEEEEEETT--------TTEEEEEETTSCEEEEETT---EEEEEECSS------
T ss_pred CCEEEEc--CCcEEEecccCCCce--eEEEEccCC--------CCEEEEEECCCCEEEEecC---ceEEEEecc------
Confidence 7999999 789999999999976 3457777 5 5799999999999999953 234444320
Q ss_pred cccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEE
Q 047036 412 WTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILIC 490 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD 490 (634)
....+.++++++++.|++|+.||.|++||+.+++ ....+.+|..+|++|+|+|+|+ |++ +.|++|++||
T Consensus 183 --------~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~-l~~~~~dg~v~iwd 252 (313)
T 3odt_A 183 --------HNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGD-VLRTYEGHESFVYCIKLLPNGD-IVSCGEDRTVRIWS 252 (313)
T ss_dssp --------CSSCEEEEEEEETTEEEEEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEECTTSC-EEEEETTSEEEEEC
T ss_pred --------CcccEEEEEEcCCCeEEEccCCCeEEEEECCchh-hhhhhhcCCceEEEEEEecCCC-EEEEecCCEEEEEE
Confidence 2334788999999999999999999999998764 7778899999999999999996 556 9999999999
Q ss_pred cccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChh
Q 047036 491 TLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQ 567 (634)
Q Consensus 491 ~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~ 567 (634)
+. +++.+..+.+|.+.. ..+.|+|. + +.|+++.|+.|.+|+++.
T Consensus 253 ~~----~~~~~~~~~~~~~~i------------------~~~~~~~~--------~---~~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 253 KE----NGSLKQVITLPAISI------------------WSVDCMSN--------G---DIIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp TT----TCCEEEEEECSSSCE------------------EEEEECTT--------S---CEEEEETTSCEEEEESCG
T ss_pred CC----CCceeEEEeccCceE------------------EEEEEccC--------C---CEEEEeCCCcEEEEeCCC
Confidence 86 577777676654210 12344443 3 477788999999999974
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=4.5e-22 Score=199.63 Aligned_cols=203 Identities=9% Similarity=0.059 Sum_probs=145.0
Q ss_pred eeEEeCCcceEEecCCCCCCCCCCcEEEEeCC--CCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeE
Q 047036 310 ALLMRGETNMMLMSPLKDGKPQAPGVQQLDIE--TGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRL 387 (634)
Q Consensus 310 ~mL~~~D~~mllsss~d~~~~~~~TIrlWDle--TGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tI 387 (634)
.+.++.++++|++++.| ++|++||+. +++++..+.+|...| ..++|+|+.. +.+|++|+.|++|
T Consensus 16 ~~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h~~~v--~~~~~~~~~~------~~~l~s~~~dg~v 81 (379)
T 3jrp_A 16 DAVLDYYGKRLATCSSD------KTIKIFEVEGETHKLIDTLTGHEGPV--WRVDWAHPKF------GTILASCSYDGKV 81 (379)
T ss_dssp EEEECSSSSEEEEEETT------SCEEEEEEETTEEEEEEEECCCSSCE--EEEEECCGGG------CSEEEEEETTSCE
T ss_pred EEEEcCCCCEEEEEECC------CcEEEEecCCCcceeeeEecCCCCcE--EEEEeCCCCC------CCEEEEeccCCEE
Confidence 33344455667777665 699999998 788999999999976 4569987521 4799999999999
Q ss_pred EEEEcCCCCc-eEEecccCCCCccccccccccccCcceEEEEECCC--C-eEEEEECCCcEEEEecccccc-ccccccCC
Q 047036 388 CQWDMRDRSG-IVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD--G-SIVVGSLDGKIRLYSKTSMRQ-AKTAFPGL 462 (634)
Q Consensus 388 klWD~R~~~~-~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d--G-~IASGS~DGtIRLWD~~t~r~-akt~L~GH 462 (634)
++||++.+.. .+..+.+|. ..+.+++++|+ | +|++|+.||+|++||+.+... ....+.+|
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 146 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHS---------------ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH 146 (379)
T ss_dssp EEEEEETTEEEEEEEECCCS---------------SCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC
T ss_pred EEEEcCCCceeEeeeecCCC---------------cceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC
Confidence 9999997641 344444333 34689999998 7 799999999999999876521 23467799
Q ss_pred CCCeEEEEECC-------------CCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCcccc
Q 047036 463 GSPITHVDVTY-------------DGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLA 528 (634)
Q Consensus 463 ~d~ItsVdfSp-------------DGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~ 528 (634)
..+|++|+|+| ||++|++ +.|++|+|||++........+..+.+|.+.
T Consensus 147 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~------------------ 208 (379)
T 3jrp_A 147 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW------------------ 208 (379)
T ss_dssp TTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC------------------
T ss_pred CCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc------------------
Confidence 99999999999 7999999 899999999986311111223334444320
Q ss_pred CCCcccccccccccccCCCCceEEE-EEcCCeEEEEeChh
Q 047036 529 GTDNKIHGGHFSWVTENGKQERHLV-ATVGKFSVIWDFQQ 567 (634)
Q Consensus 529 g~~i~Ft~a~Fs~~t~~g~~E~~Iv-tStg~~viiWdl~~ 567 (634)
...+.|+|... ....|+ ++.|+.|.+||+..
T Consensus 209 v~~~~~sp~~~--------~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 209 VRDVAWSPTVL--------LRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp EEEEEECCCCS--------SSEEEEEEETTSCEEEEEESS
T ss_pred EeEEEECCCCC--------CCCeEEEEeCCCEEEEEeCCC
Confidence 01244444311 013454 47799999999874
No 81
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.89 E-value=2.5e-21 Score=192.33 Aligned_cols=204 Identities=16% Similarity=0.190 Sum_probs=149.4
Q ss_pred EecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCC-----cEEEEEeccCCCcceeEEEEecC
Q 047036 293 RFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETG-----KIVTEWKFEKDGTDITMRDITND 366 (634)
Q Consensus 293 ~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTG-----K~V~~lkgH~~~V~I~vvsfsPd 366 (634)
+|.||. ++.+++|+|+. +++|++++.| ++|++||+.++ ..++.+++|...| ..++|+|+
T Consensus 33 tL~GH~~~V~~v~~sp~~-------~~~l~S~s~D------~~i~vWd~~~~~~~~~~~~~~l~~h~~~V--~~~~~s~d 97 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQF-------PDMILSASRD------KTIIMWKLTRDETNYGIPQRALRGHSHFV--SDVVISSD 97 (340)
T ss_dssp EECCCSSCEEEEEECTTC-------TTEEEEEETT------SCEEEEEECCSSSCSEEEEEEECCCSSCE--EEEEECTT
T ss_pred EECCccCCEEEEEEeCCC-------CCEEEEEcCC------CeEEEEECCCCCcccceeeEEEeCCCCCE--EEEEECCC
Confidence 356663 23556666652 3567777775 79999998765 4678899999986 56799998
Q ss_pred CCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEE
Q 047036 367 TKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIR 445 (634)
Q Consensus 367 ~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIR 445 (634)
+..|++|+.|+.|++|+...... ......+ .....++++++++ +||+|+.||.|+
T Consensus 98 --------g~~l~s~~~d~~i~~~~~~~~~~-~~~~~~~---------------~~~~~~~~~~~~~~~l~s~s~d~~~~ 153 (340)
T 4aow_A 98 --------GQFALSGSWDGTLRLWDLTTGTT-TRRFVGH---------------TKDVLSVAFSSDNRQIVSGSRDKTIK 153 (340)
T ss_dssp --------SSEEEEEETTSEEEEEETTTTEE-EEEEECC---------------SSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred --------CCEEEEEcccccceEEeecccce-eeeecCC---------------CCceeEEEEeecCccceeecCCCeEE
Confidence 68999999999999999987543 2222211 2234566778877 899999999999
Q ss_pred EEeccccccccccccCCCCCeEEEEECCCC--CEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecC
Q 047036 446 LYSKTSMRQAKTAFPGLGSPITHVDVTYDG--KWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTP 522 (634)
Q Consensus 446 LWD~~t~r~akt~L~GH~d~ItsVdfSpDG--k~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~P 522 (634)
+||..........+.+|...|..++|++++ .++++ +.|++|++||+. .++.+..|.+|.+..
T Consensus 154 ~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~----~~~~~~~~~~h~~~v----------- 218 (340)
T 4aow_A 154 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHIGHTGYL----------- 218 (340)
T ss_dssp EECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT----TTEEEEEECCCSSCE-----------
T ss_pred EEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECC----CCceeeEecCCCCcE-----------
Confidence 999876443445678999999999999887 45677 889999999986 577777777775311
Q ss_pred CCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChh
Q 047036 523 LDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQ 567 (634)
Q Consensus 523 e~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~ 567 (634)
..+.|+|. | ...++++.|+.|++||+..
T Consensus 219 -------~~~~~s~~--------~--~~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 219 -------NTVTVSPD--------G--SLCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp -------EEEEECTT--------S--SEEEEEETTCEEEEEETTT
T ss_pred -------EEEEECCC--------C--CEEEEEeCCCeEEEEEecc
Confidence 12444443 3 2344557899999999874
No 82
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.89 E-value=6.2e-22 Score=201.87 Aligned_cols=212 Identities=12% Similarity=0.042 Sum_probs=152.5
Q ss_pred cEEEeee-CC----C---eEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEe----CCcce-E
Q 047036 257 QSLTLGA-LD----N---SFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMR----GETNM-M 320 (634)
Q Consensus 257 ~~LavG~-~D----~---sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~----~D~~m-l 320 (634)
...++.+ ++ + .+++.| ..|.+|.........+.....+..|... ..-.+...+.+. +++++ |
T Consensus 64 ~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~l 141 (397)
T 1sq9_A 64 GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSD--MKKHSFWALKWGASNDRLLSHRL 141 (397)
T ss_dssp CEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTT--GGGSCEEEEEEECCC----CEEE
T ss_pred cEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccc--cCCCcEEEEEEeeccCCCCceEE
Confidence 4666666 56 6 666654 5788888654431101012334443100 001334445555 66677 7
Q ss_pred EecCCCCCCCCCCcEEEEeCCC------CcEEE-----EEec-------cCCCcceeEEEEecCCCCCCCCCCCEEEEEe
Q 047036 321 LMSPLKDGKPQAPGVQQLDIET------GKIVT-----EWKF-------EKDGTDITMRDITNDTKSSQLDPSESTFLGL 382 (634)
Q Consensus 321 lsss~d~~~~~~~TIrlWDleT------GK~V~-----~lkg-------H~~~V~I~vvsfsPd~K~~q~~~g~~laSGS 382 (634)
++++.| ++|++||+.+ ++.+. ++.+ |...| ..++|+|+ + .+++|+
T Consensus 142 ~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~~--------~-~l~~~~ 204 (397)
T 1sq9_A 142 VATDVK------GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFA--TSVDISER--------G-LIATGF 204 (397)
T ss_dssp EEEETT------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCC--CEEEECTT--------S-EEEEEC
T ss_pred EEEeCC------CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCc--eEEEECCC--------c-eEEEEe
Confidence 777665 7899999999 88888 8865 77765 46699998 7 999999
Q ss_pred CCCeEEEEEcCCCCceEEeccc---CCCCccccccccccccCcceEEEEECCCC-eEEEEECC---CcEEEEeccccccc
Q 047036 383 DDNRLCQWDMRDRSGIVQNMVK---GDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLD---GKIRLYSKTSMRQA 455 (634)
Q Consensus 383 ~D~tIklWD~R~~~~~Vq~l~g---h~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~D---GtIRLWD~~t~r~a 455 (634)
.|++|++||++.+. .+..+.+ |.. ....+.+++++|+| +||+|+.| |.|+|||+.+++ .
T Consensus 205 ~dg~i~i~d~~~~~-~~~~~~~~~~h~~------------~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~-~ 270 (397)
T 1sq9_A 205 NNGTVQISELSTLR-PLYNFESQHSMIN------------NSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE-R 270 (397)
T ss_dssp TTSEEEEEETTTTE-EEEEEECCC---C------------CCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC-E
T ss_pred CCCcEEEEECCCCc-eeEEEeccccccc------------cCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc-c
Confidence 99999999999754 4566654 300 02346899999998 79999999 999999998764 6
Q ss_pred cccccC-------------CCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeec
Q 047036 456 KTAFPG-------------LGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 456 kt~L~G-------------H~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
...+.+ |..+|++|+|+|||++|++ +.|++|+|||+. .++.+..|.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~----~~~~~~~~~ 330 (397)
T 1sq9_A 271 IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK----TKERITTLN 330 (397)
T ss_dssp EEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT----TTEEEEEEE
T ss_pred cceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC----CCceeEEEe
Confidence 777888 9999999999999999999 889999999986 677888887
No 83
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.89 E-value=6.6e-22 Score=202.48 Aligned_cols=223 Identities=6% Similarity=0.035 Sum_probs=157.1
Q ss_pred ceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCC----CcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeC
Q 047036 308 KKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIET----GKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLD 383 (634)
Q Consensus 308 ~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleT----GK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~ 383 (634)
...+.+++++++|++++.| ++|++||+.+ .+.+..+.+|...| ..++|+|++ +.++++|+.
T Consensus 70 v~~~~~s~~~~~l~~~~~d------g~v~vw~~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~~-------~~~l~s~~~ 134 (416)
T 2pm9_A 70 FNDLDWSHNNKIIAGALDN------GSLELYSTNEANNAINSMARFSNHSSSV--KTVKFNAKQ-------DNVLASGGN 134 (416)
T ss_dssp EEEEEECSSSSCEEEEESS------SCEEEECCSSTTSCCCEEEECCCSSSCC--CEEEECSSS-------TTBEEEECS
T ss_pred eEEEEECCCCCeEEEEccC------CeEEEeecccccccccchhhccCCccce--EEEEEcCCC-------CCEEEEEcC
Confidence 3444555666777777765 6899999998 46999999999987 456999972 468999999
Q ss_pred CCeEEEEEcCCCC------ceEEecccCCCCccccccccccccCcceEEEEECCC-C-eEEEEECCCcEEEEeccccccc
Q 047036 384 DNRLCQWDMRDRS------GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD-G-SIVVGSLDGKIRLYSKTSMRQA 455 (634)
Q Consensus 384 D~tIklWD~R~~~------~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d-G-~IASGS~DGtIRLWD~~t~r~a 455 (634)
|++|++||++.+. .. ..+. ....+...+.+++++++ + .||+|+.||.|+|||+.+++ .
T Consensus 135 dg~v~iwd~~~~~~~~~~~~~-~~~~------------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-~ 200 (416)
T 2pm9_A 135 NGEIFIWDMNKCTESPSNYTP-LTPG------------QSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK-E 200 (416)
T ss_dssp SSCEEBCBTTTTSSCTTTCCC-BCCC------------CSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE-E
T ss_pred CCeEEEEECCCCccccccccc-cccc------------cccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC-c
Confidence 9999999999765 21 1110 00112335678999998 4 79999999999999998764 5
Q ss_pred cccccCC------CCCeEEEEECCCC-CEEEE-EcCC---cEEEEEcccccCCCCeeeeec-CCCCCCCCCceeEeecCC
Q 047036 456 KTAFPGL------GSPITHVDVTYDG-KWILG-TTDT---YLILICTLFSDKDGKTKTGFS-GRMGNKIPAPRLLKLTPL 523 (634)
Q Consensus 456 kt~L~GH------~d~ItsVdfSpDG-k~LlS-S~D~---tIrLWD~~~~~~~G~~~~gF~-gh~~~~~p~pr~L~L~Pe 523 (634)
...+..| ..+|++|+|+|+| .+|++ +.|+ +|++||++. ..+.+..|. +|...
T Consensus 201 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~---~~~~~~~~~~~~~~~------------- 264 (416)
T 2pm9_A 201 VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN---ANTPLQTLNQGHQKG------------- 264 (416)
T ss_dssp EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS---TTSCSBCCCSCCSSC-------------
T ss_pred ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC---CCCCcEEeecCccCc-------------
Confidence 5566655 8999999999998 57777 7787 999999862 123344444 44321
Q ss_pred CccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeeccc
Q 047036 524 DSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFM 603 (634)
Q Consensus 524 ~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~ 603 (634)
...+.|+|. . + ...++++.|+.|.+||+.. ++. ...+..+...|..+.|-
T Consensus 265 -----v~~~~~s~~-----~--~--~~l~s~~~dg~v~~wd~~~---~~~-------------~~~~~~~~~~v~~~~~s 314 (416)
T 2pm9_A 265 -----ILSLDWCHQ-----D--E--HLLLSSGRDNTVLLWNPES---AEQ-------------LSQFPARGNWCFKTKFA 314 (416)
T ss_dssp -----EEEEEECSS-----C--S--SCEEEEESSSEEEEECSSS---CCE-------------EEEEECSSSCCCCEEEC
T ss_pred -----eeEEEeCCC-----C--C--CeEEEEeCCCCEEEeeCCC---Ccc-------------ceeecCCCCceEEEEEC
Confidence 012444442 0 2 2345557799999999873 222 25677888889888884
Q ss_pred cC
Q 047036 604 HD 605 (634)
Q Consensus 604 ~d 605 (634)
.+
T Consensus 315 ~~ 316 (416)
T 2pm9_A 315 PE 316 (416)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 84
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.89 E-value=1.2e-20 Score=185.56 Aligned_cols=211 Identities=12% Similarity=0.113 Sum_probs=150.6
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEE
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQW 390 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklW 390 (634)
+.+++++++|++++.| ++|++||+++|++++++.+|...+ .+++++ +..+++|+.++.+++|
T Consensus 73 v~~~~~~~~l~sgs~D------g~v~iw~~~~~~~~~~~~~h~~~~----~~~~~~--------~~~l~s~~~~~~~~~~ 134 (318)
T 4ggc_A 73 VAWIKEGNYLAVGTSS------AEVQLWDVQQQKRLRNMTSHSARV----GSLSWN--------SYILSSGSRSGHIHHH 134 (318)
T ss_dssp EEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSCE----EEEEEE--------TTEEEEEETTSEEEEE
T ss_pred EEECCCCCEEEEEECC------CcEEEeecCCceeEEEecCccceE----EEeecC--------CCEEEEEecCCceEee
Confidence 3344455677777765 799999999999999999999753 466665 5799999999999999
Q ss_pred EcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccc---ccccccCCCCCe
Q 047036 391 DMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQ---AKTAFPGLGSPI 466 (634)
Q Consensus 391 D~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~---akt~L~GH~d~I 466 (634)
+.......+..+.+|... +.+++++++| +|++|+.||+|+|||+.+++. .......|..+|
T Consensus 135 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v 199 (318)
T 4ggc_A 135 DVRVAEHHVATLSGHSQE---------------VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAV 199 (318)
T ss_dssp ETTSSSCEEEEEECCSSC---------------EEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCE
T ss_pred ecCCCceeEEEEcCccCc---------------eEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCce
Confidence 999876666777665543 4677888888 799999999999999887532 223455788999
Q ss_pred EEEEECCCCCEEE---E-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCccccccccccc
Q 047036 467 THVDVTYDGKWIL---G-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWV 542 (634)
Q Consensus 467 tsVdfSpDGk~Ll---S-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~ 542 (634)
.+++++|++..++ + +.+++|+|||.. .+.....+..+. .+ ..+.|.+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~----~~~~~~~~~~~~---------------~v----~~~~~~~~----- 251 (318)
T 4ggc_A 200 KAVAWCPWQSNVLATGGGTSDRHIRIWNVC----SGACLSAVDAHS---------------QV----CSILWSPH----- 251 (318)
T ss_dssp EEEEECTTSTTEEEEEECTTTCEEEEEETT----TCCEEEEEECSS---------------CE----EEEEEETT-----
T ss_pred EEEEecCCCCcEEEEEecCCCCEEEEEecc----ccccccccccee---------------ee----eeeeeccc-----
Confidence 9999999987665 3 468999999975 233222111110 00 11233322
Q ss_pred ccCCCCceEEEEE--cCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeeccc
Q 047036 543 TENGKQERHLVAT--VGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFM 603 (634)
Q Consensus 543 t~~g~~E~~IvtS--tg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~ 603 (634)
+ ...++++ .++.|+|||+.. ++. ...+..|.+.|.++.|-
T Consensus 252 ---~--~~~~~~sg~~d~~i~iwd~~~---~~~-------------~~~l~gH~~~V~~l~~s 293 (318)
T 4ggc_A 252 ---Y--KELISGHGFAQNQLVIWKYPT---MAK-------------VAELKGHTSRVLSLTMS 293 (318)
T ss_dssp ---T--TEEEEEECTTTCCEEEEETTT---CCE-------------EEEECCCSSCEEEEEEC
T ss_pred ---c--cceEEEEEcCCCEEEEEECCC---CcE-------------EEEEcCCCCCEEEEEEc
Confidence 2 2344443 589999999873 332 25788899999999983
No 85
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.89 E-value=4.2e-21 Score=198.40 Aligned_cols=199 Identities=11% Similarity=0.057 Sum_probs=130.8
Q ss_pred CCcEEEeee-CCCeEEEec--CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceE-EecCCCCCCC
Q 047036 255 GVQSLTLGA-LDNSFLVSD--LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMM-LMSPLKDGKP 330 (634)
Q Consensus 255 ~~~~LavG~-~D~sfvv~G--~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~ml-lsss~d~~~~ 330 (634)
...+.++++ +|+++++.| +.+.||...... ....... .....+.+..+.+++ ++++.+
T Consensus 19 ~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~-----~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~d---- 80 (355)
T 3vu4_A 19 SNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVA-----HIMSQEM---------RHLSKVRMLHRTNYVAFVTGVK---- 80 (355)
T ss_dssp CCCCCEEEECTTSSEEEEECSSEEEEEEETTEE-----EEEEEEC---------SCCCEEEECTTSSEEEEECSST----
T ss_pred CCceEEEEECCCCCEEEEEcCCEEEEEecCCcc-----eeeeeec---------CCeEEEEEcCCCCEEEEEECCc----
Confidence 345778888 899888876 567788854422 1111110 112223333444555 445443
Q ss_pred CCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCC---------CCCCC------------------CEEEE--E
Q 047036 331 QAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSS---------QLDPS------------------ESTFL--G 381 (634)
Q Consensus 331 ~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~---------q~~~g------------------~~laS--G 381 (634)
++|++||+.+|+++.++..+. .| ..++|+|+.... .+..+ ..++. |
T Consensus 81 --~~v~iWd~~~~~~~~~~~~~~-~v--~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg 155 (355)
T 3vu4_A 81 --EVVHIWDDVKKQDVSRIKVDA-PV--KDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNE 155 (355)
T ss_dssp --TEEEEEETTTTEEEEEEECSS-CE--EEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEES
T ss_pred --cEEEEEECCCCcEEEEEECCC-ce--EEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCC
Confidence 699999999999999998544 44 445777641000 00000 12222 4
Q ss_pred eCCCeEEEEEcCCCCc--------------e-EEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCc-E
Q 047036 382 LDDNRLCQWDMRDRSG--------------I-VQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGK-I 444 (634)
Q Consensus 382 S~D~tIklWD~R~~~~--------------~-Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGt-I 444 (634)
+.|++|++||++.+.. + ++.+.+| ...+.+++++|+| +||+||.||+ |
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h---------------~~~v~~~~~s~~g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH---------------TNPIKMVRLNRKSDMVATCSQDGTII 220 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCC---------------SSCEEEEEECTTSSEEEEEETTCSEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEcc---------------CCceEEEEECCCCCEEEEEeCCCCEE
Confidence 5666666666654320 0 2333333 3357899999999 7999999999 9
Q ss_pred EEEecccccccccccc-C-CCCCeEEEEECCCCCEEEE-EcCCcEEEEEcc
Q 047036 445 RLYSKTSMRQAKTAFP-G-LGSPITHVDVTYDGKWILG-TTDTYLILICTL 492 (634)
Q Consensus 445 RLWD~~t~r~akt~L~-G-H~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~ 492 (634)
||||+.+++ ....|. | |..+|++|+|||||++|++ +.|++|+|||+.
T Consensus 221 ~iwd~~~~~-~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 221 RVFKTEDGV-LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp EEEETTTCC-EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred EEEECCCCc-EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 999998874 667777 6 9999999999999999999 899999999986
No 86
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.89 E-value=3.3e-21 Score=197.39 Aligned_cols=194 Identities=10% Similarity=0.034 Sum_probs=142.4
Q ss_pred eCCc-ceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEe--ccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEE
Q 047036 314 RGET-NMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWK--FEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQW 390 (634)
Q Consensus 314 ~~D~-~mllsss~d~~~~~~~TIrlWDleTGK~V~~lk--gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklW 390 (634)
+.++ ++|++++.| ++|++||+.+++....+. +|...| ..++|+|+. +..+++|+.|++|++|
T Consensus 82 ~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~h~~~v--~~~~~~~~~-------~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 82 HPTHPTTVAVGSKG------GDIILWDYDVQNKTSFIQGMGPGDAI--TGMKFNQFN-------TNQLFVSSIRGATTLR 146 (383)
T ss_dssp CSSCTTEEEEEEBT------SCEEEEETTSTTCEEEECCCSTTCBE--EEEEEETTE-------EEEEEEEETTTEEEEE
T ss_pred CCCCCCEEEEEcCC------CeEEEEeCCCcccceeeecCCcCCce--eEEEeCCCC-------CCEEEEEeCCCEEEEE
Confidence 3344 566677665 799999999999988886 698876 466999941 5799999999999999
Q ss_pred EcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEE
Q 047036 391 DMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHV 469 (634)
Q Consensus 391 D~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsV 469 (634)
|++. . .+..+..|.. ....+.++++++++ +||+|+.||+|++||+.+ .....+.+|..+|++|
T Consensus 147 d~~~-~-~~~~~~~~~~------------~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~~~~~~~~h~~~v~~~ 210 (383)
T 3ei3_B 147 DFSG-S-VIQVFAKTDS------------WDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG--HEIFKEKLHKAKVTHA 210 (383)
T ss_dssp ETTS-C-EEEEEECCCC------------SSCCEEEEEEETTTTEEEEEETTSEEEEEETTS--CEEEEEECSSSCEEEE
T ss_pred ECCC-C-ceEEEeccCC------------CCCCeEEEEECCCCCEEEEECCCCCEEEEECCC--CEEEEeccCCCcEEEE
Confidence 9985 3 3455543221 12457899999998 899999999999999853 3667888999999999
Q ss_pred EECCCCC-EEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCccccc-ccccccccCC
Q 047036 470 DVTYDGK-WILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHG-GHFSWVTENG 546 (634)
Q Consensus 470 dfSpDGk-~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~-a~Fs~~t~~g 546 (634)
+|+|+|+ +|++ +.|++|+|||+......+.++..+ +|.+. ...+.|+| . |
T Consensus 211 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~------------------v~~~~~s~~~--------~ 263 (383)
T 3ei3_B 211 EFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKP------------------VNAAYFNPTD--------S 263 (383)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSC------------------EEEEEECTTT--------S
T ss_pred EECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCc------------------eEEEEEcCCC--------C
Confidence 9999999 7888 889999999987322223333333 22210 01345554 2 2
Q ss_pred CCceEEEEEcCCeEEEEeChh
Q 047036 547 KQERHLVATVGKFSVIWDFQQ 567 (634)
Q Consensus 547 ~~E~~IvtStg~~viiWdl~~ 567 (634)
...++++.|+.|.+||+..
T Consensus 264 --~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 264 --TKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp --CEEEEEESSSEEEEEETTB
T ss_pred --CEEEEEcCCCcEEEEECCC
Confidence 2344557799999999874
No 87
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.89 E-value=7.3e-21 Score=186.27 Aligned_cols=245 Identities=14% Similarity=0.157 Sum_probs=169.9
Q ss_pred cEEEeeeCCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCC
Q 047036 257 QSLTLGALDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAP 333 (634)
Q Consensus 257 ~~LavG~~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~ 333 (634)
...++.++++.+++.| ..|.||...... ....+..| -.+...+.+++++++|++++.| +
T Consensus 20 ~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~-----~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~d------g 81 (313)
T 3odt_A 20 DVRDVVAVDDSKVASVSRDGTVRLWSKDDQW-----LGTVVYTG-------QGFLNSVCYDSEKELLLFGGKD------T 81 (313)
T ss_dssp CEEEEEEEETTEEEEEETTSEEEEEEESSSE-----EEEEEEEC-------SSCEEEEEEETTTTEEEEEETT------S
T ss_pred CcEEEEecCCCEEEEEEcCCcEEEEECCCCE-----EEEEeecC-------CccEEEEEECCCCCEEEEecCC------C
Confidence 3555555566556654 478889874432 12223332 1234445556667778888775 6
Q ss_pred cEEEEeCCCC---cEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcc
Q 047036 334 GVQQLDIETG---KIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVL 410 (634)
Q Consensus 334 TIrlWDleTG---K~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~ 410 (634)
+|++||+... +.+..+.+|...| ..++| + +..+++|+.|++|++||. ...+..+.+|..+
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~--~--------~~~l~~~~~d~~i~~~d~---~~~~~~~~~~~~~-- 144 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTLIGHQGNV--CSLSF--Q--------DGVVISGSWDKTAKVWKE---GSLVYNLQAHNAS-- 144 (313)
T ss_dssp CEEEEETTCCTTSCC-CEECCCSSCE--EEEEE--E--------TTEEEEEETTSEEEEEET---TEEEEEEECCSSC--
T ss_pred eEEEEEeeecCCCCcccchhhcccCE--EEEEe--c--------CCEEEEEeCCCCEEEEcC---CcEEEecccCCCc--
Confidence 8999998654 7789999999875 34466 3 469999999999999993 2345566555433
Q ss_pred ccccccccccCcceEEEEECC-CC-eEEEEECCCcEEEEeccccccccccccC-CCCCeEEEEECCCCCEEEE-EcCCcE
Q 047036 411 HWTQGHQFSRGTNFQCFASTG-DG-SIVVGSLDGKIRLYSKTSMRQAKTAFPG-LGSPITHVDVTYDGKWILG-TTDTYL 486 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~-dG-~IASGS~DGtIRLWD~~t~r~akt~L~G-H~d~ItsVdfSpDGk~LlS-S~D~tI 486 (634)
+.++++.+ ++ +|++|+.||.|++||.. .....+.+ |..+|.+++|+|+|+ |++ +.|++|
T Consensus 145 -------------v~~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i 207 (313)
T 3odt_A 145 -------------VWDAKVVSFSENKFLTASADKTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLI 207 (313)
T ss_dssp -------------EEEEEEEETTTTEEEEEETTSCEEEEETT---EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEE
T ss_pred -------------eeEEEEccCCCCEEEEEECCCCEEEEecC---ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeE
Confidence 45666655 55 89999999999999943 24556666 999999999999999 666 999999
Q ss_pred EEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeCh
Q 047036 487 ILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQ 566 (634)
Q Consensus 487 rLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~ 566 (634)
++||+. .++.+..|.+|.+.. ..+.|+|. + +.++++.++.|.+||+.
T Consensus 208 ~i~d~~----~~~~~~~~~~~~~~i------------------~~~~~~~~--------~---~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 208 KLVDMH----TGDVLRTYEGHESFV------------------YCIKLLPN--------G---DIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp EEEETT----TCCEEEEEECCSSCE------------------EEEEECTT--------S---CEEEEETTSEEEEECTT
T ss_pred EEEECC----chhhhhhhhcCCceE------------------EEEEEecC--------C---CEEEEecCCEEEEEECC
Confidence 999986 577777777665310 12444443 3 46667889999999987
Q ss_pred hhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 567 QVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 567 ~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
. ++. ...+..+...|..+.|
T Consensus 255 ~---~~~-------------~~~~~~~~~~i~~~~~ 274 (313)
T 3odt_A 255 N---GSL-------------KQVITLPAISIWSVDC 274 (313)
T ss_dssp T---CCE-------------EEEEECSSSCEEEEEE
T ss_pred C---Cce-------------eEEEeccCceEEEEEE
Confidence 3 322 2466777788888887
No 88
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.89 E-value=1e-20 Score=198.84 Aligned_cols=218 Identities=14% Similarity=0.225 Sum_probs=158.8
Q ss_pred CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeC
Q 047036 264 LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDI 340 (634)
Q Consensus 264 ~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDl 340 (634)
.++.+++.| .+|.||...... ....+.+|. .+...+.++ .++|++++.| ++|++||+
T Consensus 127 ~~g~~l~sg~~dg~i~vwd~~~~~-----~~~~~~~h~-------~~v~~~~~~--~~~l~s~~~d------g~i~vwd~ 186 (445)
T 2ovr_B 127 FCGNRIVSGSDDNTLKVWSAVTGK-----CLRTLVGHT-------GGVWSSQMR--DNIIISGSTD------RTLKVWNA 186 (445)
T ss_dssp EETTEEEEEETTSCEEEEETTTCC-----EEEECCCCS-------SCEEEEEEE--TTEEEEEETT------SCEEEEET
T ss_pred EcCCEEEEEECCCcEEEEECCCCc-----EEEEEcCCC-------CCEEEEEec--CCEEEEEeCC------CeEEEEEC
Confidence 345555554 588889865543 233455552 122333333 4577777765 79999999
Q ss_pred CCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccccccccccc
Q 047036 341 ETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSR 420 (634)
Q Consensus 341 eTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~ 420 (634)
.+|+++.++.+|...| ..++|+ +..+++|+.|++|++||++++.. +..+.+|..+
T Consensus 187 ~~~~~~~~~~~h~~~v--~~~~~~----------~~~l~s~s~dg~i~~wd~~~~~~-~~~~~~~~~~------------ 241 (445)
T 2ovr_B 187 ETGECIHTLYGHTSTV--RCMHLH----------EKRVVSGSRDATLRVWDIETGQC-LHVLMGHVAA------------ 241 (445)
T ss_dssp TTTEEEEEECCCSSCE--EEEEEE----------TTEEEEEETTSEEEEEESSSCCE-EEEEECCSSC------------
T ss_pred CcCcEEEEECCCCCcE--EEEEec----------CCEEEEEeCCCEEEEEECCCCcE-EEEEcCCccc------------
Confidence 9999999999999875 344664 35899999999999999998654 5667655443
Q ss_pred CcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCC
Q 047036 421 GTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGK 499 (634)
Q Consensus 421 ~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~ 499 (634)
+.|+++ .+.+||+|+.||.|++||+.+++ ....+.+|..+|++++| ||++|++ +.|++|++||+. +++
T Consensus 242 ---v~~~~~-~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~----~~~ 310 (445)
T 2ovr_B 242 ---VRCVQY-DGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE----TGN 310 (445)
T ss_dssp ---EEEEEE-CSSCEEEEETTSCEEEEEGGGTE-EEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT----TCC
T ss_pred ---EEEEEE-CCCEEEEEcCCCEEEEEECCCCc-EeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC----CCC
Confidence 467777 33489999999999999998864 77788999999999999 8999999 899999999986 677
Q ss_pred eeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChh
Q 047036 500 TKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQ 567 (634)
Q Consensus 500 ~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~ 567 (634)
++..+.+|.... ..+. |+ + ...++++.|+.|.+||+..
T Consensus 311 ~~~~~~~~~~~v--------------------~~~~---~~-----~--~~l~~~~~dg~i~vwd~~~ 348 (445)
T 2ovr_B 311 CIHTLTGHQSLT--------------------SGME---LK-----D--NILVSGNADSTVKIWDIKT 348 (445)
T ss_dssp EEEEECCCCSCE--------------------EEEE---EE-----T--TEEEEEETTSCEEEEETTT
T ss_pred EEEEEcCCcccE--------------------EEEE---Ee-----C--CEEEEEeCCCeEEEEECCC
Confidence 777777665310 1111 11 2 2455557899999999863
No 89
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.89 E-value=2.5e-21 Score=228.27 Aligned_cols=237 Identities=16% Similarity=0.160 Sum_probs=174.7
Q ss_pred CcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCC
Q 047036 256 VQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKP 330 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~ 330 (634)
..+.++++ +|+.+++.| .+|.||...... ....+.+|. ++.+.+|+| ++++|++++.|
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~-----~~~~~~~h~~~v~~~~~s~--------~~~~l~s~~~d---- 678 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGE-----KLLDIKAHEDEVLCCAFSS--------DDSYIATCSAD---- 678 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-----EEEEECCCSSCEEEEEECT--------TSSEEEEEETT----
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCC-----EEEEeccCCCCEEEEEEec--------CCCEEEEEeCC----
Confidence 34778888 899988875 589999976543 344566652 234455555 55667777765
Q ss_pred CCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcc
Q 047036 331 QAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVL 410 (634)
Q Consensus 331 ~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~ 410 (634)
++|++||+.+|+++.++.+|...| ..++|+|++. +..+++|+.|++|++||++++.+ +..+.+|..+
T Consensus 679 --~~v~vwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~------~~~l~sg~~d~~v~vwd~~~~~~-~~~~~~h~~~-- 745 (1249)
T 3sfz_A 679 --KKVKIWDSATGKLVHTYDEHSEQV--NCCHFTNKSN------HLLLATGSNDFFLKLWDLNQKEC-RNTMFGHTNS-- 745 (1249)
T ss_dssp --SEEEEEETTTCCEEEEEECCSSCE--EEEEECSSSS------CCEEEEEETTSCEEEEETTSSSE-EEEECCCSSC--
T ss_pred --CeEEEEECCCCceEEEEcCCCCcE--EEEEEecCCC------ceEEEEEeCCCeEEEEECCCcch-hheecCCCCC--
Confidence 799999999999999999999986 4669999633 46899999999999999998764 5677666543
Q ss_pred ccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccccccc-------------------------------
Q 047036 411 HWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTA------------------------------- 458 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~------------------------------- 458 (634)
+.+++++|+| +||+|+.||+|++||+.+++ ....
T Consensus 746 -------------v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~ 811 (1249)
T 3sfz_A 746 -------------VNHCRFSPDDELLASCSADGTLRLWDVRSAN-ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD 811 (1249)
T ss_dssp -------------EEEEEECSSTTEEEEEESSSEEEEEEGGGTE-EEEEEECCCCC--------CCCCCBCCCCBCTTSS
T ss_pred -------------EEEEEEecCCCEEEEEECCCeEEEEeCCCCc-ccceecccccccccCCccccccceEEEEEECCCCC
Confidence 5788999998 89999999999999987642 1111
Q ss_pred ------------------------ccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCC
Q 047036 459 ------------------------FPGLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIP 513 (634)
Q Consensus 459 ------------------------L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p 513 (634)
..+|..+|++++|+|+|++|++ +.|++|++||+. .+..+..+.+|.+..
T Consensus 812 ~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~----~~~~~~~~~~h~~~v-- 885 (1249)
T 3sfz_A 812 KIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNID----SRLKVADCRGHLSWV-- 885 (1249)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETT----TTEEEEEECCCSSCE--
T ss_pred EEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcC----CCceeeecCCCccce--
Confidence 1277888888889999888888 788889999875 566666666665311
Q ss_pred CceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChhh
Q 047036 514 APRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQV 568 (634)
Q Consensus 514 ~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~v 568 (634)
..+.|+|. | ...++++.|+.|.+|++...
T Consensus 886 ----------------~~v~~spd--------g--~~l~s~s~dg~v~vw~~~~~ 914 (1249)
T 3sfz_A 886 ----------------HGVMFSPD--------G--SSFLTASDDQTIRVWETKKV 914 (1249)
T ss_dssp ----------------EEEEECTT--------S--SEEEEEETTSCEEEEEHHHH
T ss_pred ----------------EEEEECCC--------C--CEEEEEeCCCeEEEEEcccc
Confidence 12445443 3 24455578999999998753
No 90
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.89 E-value=2.8e-21 Score=200.46 Aligned_cols=180 Identities=14% Similarity=0.080 Sum_probs=136.3
Q ss_pred CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeC-CcceEEecCCCCCCCCCCcEEEEeCCCC-------c
Q 047036 273 LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRG-ETNMMLMSPLKDGKPQAPGVQQLDIETG-------K 344 (634)
Q Consensus 273 ~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~-D~~mllsss~d~~~~~~~TIrlWDleTG-------K 344 (634)
..|.||.....|.... ....+.+|. .+...+.+++ ++++|++++.| ++|++||+.++ +
T Consensus 57 g~i~v~~~~~~~~~~~-~~~~~~~h~-------~~V~~~~~~p~~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~ 122 (402)
T 2aq5_A 57 GAFLVLPLGKTGRVDK-NVPLVCGHT-------APVLDIAWCPHNDNVIASGSED------CTVMVWEIPDGGLVLPLRE 122 (402)
T ss_dssp CCEEEEETTCCEECCT-TCCCBCCCS-------SCEEEEEECTTCTTEEEEEETT------SEEEEEECCTTCCSSCBCS
T ss_pred CEEEEEECccCCCCCC-CCceEecCC-------CCEEEEEeCCCCCCEEEEEeCC------CeEEEEEccCCCCccccCC
Confidence 5677787655431111 111233441 2333444444 56777887765 79999999998 6
Q ss_pred EEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEec--ccCCCCccccccccccccCc
Q 047036 345 IVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNM--VKGDSPVLHWTQGHQFSRGT 422 (634)
Q Consensus 345 ~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l--~gh~s~V~~~~~g~~y~~~~ 422 (634)
.+..+.+|...| ..++|+|++ ...+++|+.|++|++||++++. .+..+ .+|..
T Consensus 123 ~~~~~~~h~~~v--~~~~~~p~~-------~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~--------------- 177 (402)
T 2aq5_A 123 PVITLEGHTKRV--GIVAWHPTA-------QNVLLSAGCDNVILVWDVGTGA-AVLTLGPDVHPD--------------- 177 (402)
T ss_dssp CSEEEECCSSCE--EEEEECSSB-------TTEEEEEETTSCEEEEETTTTE-EEEEECTTTCCS---------------
T ss_pred ceEEecCCCCeE--EEEEECcCC-------CCEEEEEcCCCEEEEEECCCCC-ccEEEecCCCCC---------------
Confidence 789999999986 466999983 1599999999999999999865 35566 44433
Q ss_pred ceEEEEECCCC-eEEEEECCCcEEEEeccccccccccc-cCCCCC-eEEEEECCCCCEEEEE----cCCcEEEEEcc
Q 047036 423 NFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAF-PGLGSP-ITHVDVTYDGKWILGT----TDTYLILICTL 492 (634)
Q Consensus 423 ~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L-~GH~d~-ItsVdfSpDGk~LlSS----~D~tIrLWD~~ 492 (634)
.+.+++++|+| +||+|+.||+|+|||+.+++ ....+ .+|... |.++.|+|||++|+++ .|++|+|||+.
T Consensus 178 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 178 TIYSVDWSRDGALICTSCRDKRVRVIEPRKGT-VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETTTTE-EEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEeCCCCc-eeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 46899999998 79999999999999998864 55666 788876 9999999999999886 79999999976
No 91
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.89 E-value=2.1e-21 Score=217.46 Aligned_cols=217 Identities=13% Similarity=0.093 Sum_probs=159.7
Q ss_pred cccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEE
Q 047036 301 IGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFL 380 (634)
Q Consensus 301 ~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laS 380 (634)
.+.+|+|+ +.+|++++.+ ++|++||+.+|+.++++.+|...| ..++|+|+ +..|++
T Consensus 17 ~~i~~sp~--------~~~la~~~~~------g~v~iwd~~~~~~~~~~~~~~~~v--~~~~~s~~--------~~~l~~ 72 (814)
T 3mkq_A 17 KGIDFHPT--------EPWVLTTLYS------GRVEIWNYETQVEVRSIQVTETPV--RAGKFIAR--------KNWIIV 72 (814)
T ss_dssp EEEEECSS--------SSEEEEEETT------SEEEEEETTTTEEEEEEECCSSCE--EEEEEEGG--------GTEEEE
T ss_pred EEEEECCC--------CCEEEEEeCC------CEEEEEECCCCceEEEEecCCCcE--EEEEEeCC--------CCEEEE
Confidence 45556655 4556666654 799999999999999999999976 46699998 679999
Q ss_pred EeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccc
Q 047036 381 GLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAF 459 (634)
Q Consensus 381 GS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L 459 (634)
|+.|++|++||+++++. +..+.+|.. .+.+++++|+| +||+|+.||+|++||+.+.......+
T Consensus 73 ~~~dg~i~vw~~~~~~~-~~~~~~~~~---------------~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 136 (814)
T 3mkq_A 73 GSDDFRIRVFNYNTGEK-VVDFEAHPD---------------YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (814)
T ss_dssp EETTSEEEEEETTTCCE-EEEEECCSS---------------CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE
T ss_pred EeCCCeEEEEECCCCcE-EEEEecCCC---------------CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE
Confidence 99999999999998754 567765544 36889999999 79999999999999988753456788
Q ss_pred cCCCCCeEEEEECC-CCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccc
Q 047036 460 PGLGSPITHVDVTY-DGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGG 537 (634)
Q Consensus 460 ~GH~d~ItsVdfSp-DGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a 537 (634)
.+|..+|++++|+| +|++|++ +.|++|++||+. .++....+..+... . ...+.|.|.
T Consensus 137 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~----~~~~~~~~~~~~~~-------------~----v~~~~~~~~ 195 (814)
T 3mkq_A 137 EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG----QSTPNFTLTTGQER-------------G----VNYVDYYPL 195 (814)
T ss_dssp ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETT----CSSCSEEEECCCTT-------------C----CCEEEECCS
T ss_pred cCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECC----CCcceeEEecCCCC-------------C----EEEEEEEEC
Confidence 89999999999999 9999999 899999999975 34333333322210 0 012344432
Q ss_pred cccccccCCCCceEEEEEcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 538 HFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 538 ~Fs~~t~~g~~E~~IvtStg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
. .+ ...++++.++.|.+||+.. ++. ...+..+...|..+.|
T Consensus 196 -----~-~~--~~l~~~~~dg~i~~~d~~~---~~~-------------~~~~~~~~~~v~~~~~ 236 (814)
T 3mkq_A 196 -----P-DK--PYMITASDDLTIKIWDYQT---KSC-------------VATLEGHMSNVSFAVF 236 (814)
T ss_dssp -----T-TC--CEEEEECTTSEEEEEETTT---TEE-------------EEEEECCSSCEEEEEE
T ss_pred -----C-CC--CEEEEEeCCCEEEEEECCC---CcE-------------EEEEcCCCCCEEEEEE
Confidence 1 12 2344456789999999863 221 2345566667776666
No 92
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.89 E-value=5.6e-21 Score=205.18 Aligned_cols=236 Identities=8% Similarity=0.053 Sum_probs=170.2
Q ss_pred CcEEEeee-CCCeEEEe--cCeeeEEEccCCceecceeEEEecCCCCCcccccCc-ceeeEEeC--CcceEEecCCCCCC
Q 047036 256 VQSLTLGA-LDNSFLVS--DLGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTP-KKALLMRG--ETNMMLMSPLKDGK 329 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~--G~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP-~~~mL~~~--D~~mllsss~d~~~ 329 (634)
+...++++ +|+.+++- +..|.||......-. ......+.+|. .+ ...+.+++ ++++|++++.|
T Consensus 19 ~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~-~~~~~~~~~h~-------~~~v~~~~~sp~~~~~~l~s~~~d--- 87 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSK-VPPVVQFTGHG-------SSVVTTVKFSPIKGSQYLCSGDES--- 87 (615)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCS-SCSEEEECTTT-------TSCEEEEEECSSTTCCEEEEEETT---
T ss_pred CceeEEEECCCCCEEEEecCCeEEEEECCCCCCc-cccceEEecCC-------CceEEEEEECcCCCCCEEEEecCC---
Confidence 34566666 67766554 468899987643100 01344566652 12 33344444 55677777765
Q ss_pred CCCCcEEEEeCCCC--------cEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC----CeEEEEEcCCCCc
Q 047036 330 PQAPGVQQLDIETG--------KIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD----NRLCQWDMRDRSG 397 (634)
Q Consensus 330 ~~~~TIrlWDleTG--------K~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D----~tIklWD~R~~~~ 397 (634)
++|++||+.+| +++.++.+|...| ..++|+|+ +..+++++.+ +.|++||. +.
T Consensus 88 ---g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~s~~--------~~~l~~~~~~~~~~~~v~~~d~--~~- 151 (615)
T 1pgu_A 88 ---GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPI--SDISWDFE--------GRRLCVVGEGRDNFGVFISWDS--GN- 151 (615)
T ss_dssp ---SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCE--EEEEECTT--------SSEEEEEECCSSCSEEEEETTT--CC-
T ss_pred ---CEEEEEeCCCCcccccccccccchhhcccccE--EEEEEeCC--------CCEEEEeccCCCCccEEEEEEC--CC-
Confidence 79999999866 8889999999876 46699998 6789999988 79999994 23
Q ss_pred eEEecccCCCCccccccccccccCcceEEEEECCCC--eEEEEECCCcEEEEeccccccccccccCCCC---CeEEEEEC
Q 047036 398 IVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG--SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGS---PITHVDVT 472 (634)
Q Consensus 398 ~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG--~IASGS~DGtIRLWD~~t~r~akt~L~GH~d---~ItsVdfS 472 (634)
.+..+.+|.. .+.+++++|+| .||+|+.||.|++||+.+++ ....+.+|.. +|++|+|+
T Consensus 152 ~~~~~~~~~~---------------~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~~ 215 (615)
T 1pgu_A 152 SLGEVSGHSQ---------------RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK-FSASDRTHHKQGSFVRDVEFS 215 (615)
T ss_dssp EEEECCSCSS---------------CEEEEEECSSSSCEEEEEETTTEEEEEETTTBE-EEEEECSSSCTTCCEEEEEEC
T ss_pred cceeeecCCc---------------cEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc-eeeeecccCCCCceEEEEEEC
Confidence 4567765544 36789999998 69999999999999998864 7778999999 99999999
Q ss_pred CC-CCEEEE-EcCCcEEEEEcccccCCCCeeeee-c---CCCCCCCCCceeEeecCCCccccCCCcccccccccccccCC
Q 047036 473 YD-GKWILG-TTDTYLILICTLFSDKDGKTKTGF-S---GRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENG 546 (634)
Q Consensus 473 pD-Gk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF-~---gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g 546 (634)
|+ |++|++ +.|++|++||+. .|+.+..| . +|.+. ...+.|+ . +
T Consensus 216 ~~~~~~l~~~~~dg~i~vwd~~----~~~~~~~~~~~~~~~~~~------------------v~~~~~~-~--------~ 264 (615)
T 1pgu_A 216 PDSGEFVITVGSDRKISCFDGK----SGEFLKYIEDDQEPVQGG------------------IFALSWL-D--------S 264 (615)
T ss_dssp STTCCEEEEEETTCCEEEEETT----TCCEEEECCBTTBCCCSC------------------EEEEEES-S--------S
T ss_pred CCCCCEEEEEeCCCeEEEEECC----CCCEeEEecccccccCCc------------------eEEEEEc-C--------C
Confidence 99 999999 889999999985 56666666 3 33320 0123333 2 2
Q ss_pred CCceEEEEEcCCeEEEEeChh
Q 047036 547 KQERHLVATVGKFSVIWDFQQ 567 (634)
Q Consensus 547 ~~E~~IvtStg~~viiWdl~~ 567 (634)
...++++.++.|.+||+..
T Consensus 265 --~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 265 --QKFATVGADATIRVWDVTT 283 (615)
T ss_dssp --SEEEEEETTSEEEEEETTT
T ss_pred --CEEEEEcCCCcEEEEECCC
Confidence 2445557799999999973
No 93
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.88 E-value=1.9e-21 Score=201.62 Aligned_cols=177 Identities=15% Similarity=0.133 Sum_probs=136.6
Q ss_pred CcEEEEeCCCC----cEEEEEeccCCCcceeEEEEec-CCCCCCCCCCCEEEEEeCCCeEEEEEcCCCC------ceEEe
Q 047036 333 PGVQQLDIETG----KIVTEWKFEKDGTDITMRDITN-DTKSSQLDPSESTFLGLDDNRLCQWDMRDRS------GIVQN 401 (634)
Q Consensus 333 ~TIrlWDleTG----K~V~~lkgH~~~V~I~vvsfsP-d~K~~q~~~g~~laSGS~D~tIklWD~R~~~------~~Vq~ 401 (634)
++|++||+.+. +.+..+.+|...| ..++|+| + +.+|++|+.|++|++||+..++ ..+..
T Consensus 57 g~i~v~~~~~~~~~~~~~~~~~~h~~~V--~~~~~~p~~--------~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~ 126 (402)
T 2aq5_A 57 GAFLVLPLGKTGRVDKNVPLVCGHTAPV--LDIAWCPHN--------DNVIASGSEDCTVMVWEIPDGGLVLPLREPVIT 126 (402)
T ss_dssp CCEEEEETTCCEECCTTCCCBCCCSSCE--EEEEECTTC--------TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEE
T ss_pred CEEEEEECccCCCCCCCCceEecCCCCE--EEEEeCCCC--------CCEEEEEeCCCeEEEEEccCCCCccccCCceEE
Confidence 79999999654 3456788999986 4669999 6 6799999999999999998763 23455
Q ss_pred cccCCCCccccccccccccCcceEEEEECCCC--eEEEEECCCcEEEEeccccccccccc--cCCCCCeEEEEECCCCCE
Q 047036 402 MVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG--SIVVGSLDGKIRLYSKTSMRQAKTAF--PGLGSPITHVDVTYDGKW 477 (634)
Q Consensus 402 l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG--~IASGS~DGtIRLWD~~t~r~akt~L--~GH~d~ItsVdfSpDGk~ 477 (634)
+.+|.. .+.+++++|+| .||+|+.||+|+|||+.+++ ....+ .+|..+|++|+|+|||++
T Consensus 127 ~~~h~~---------------~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 127 LEGHTK---------------RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA-AVLTLGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp EECCSS---------------CEEEEEECSSBTTEEEEEETTSCEEEEETTTTE-EEEEECTTTCCSCEEEEEECTTSSC
T ss_pred ecCCCC---------------eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC-ccEEEecCCCCCceEEEEECCCCCE
Confidence 555543 46899999997 69999999999999998864 66677 899999999999999999
Q ss_pred EEE-EcCCcEEEEEcccccCCCCeeeee-cCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEE
Q 047036 478 ILG-TTDTYLILICTLFSDKDGKTKTGF-SGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVAT 555 (634)
Q Consensus 478 LlS-S~D~tIrLWD~~~~~~~G~~~~gF-~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtS 555 (634)
|++ +.|++|+|||++ .++.+..+ .+|.+.. + ..+.|+|. | ..|+++
T Consensus 191 l~~~~~d~~i~iwd~~----~~~~~~~~~~~~~~~~---~--------------~~~~~~~~--------~---~~l~~g 238 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPR----KGTVVAEKDRPHEGTR---P--------------VHAVFVSE--------G---KILTTG 238 (402)
T ss_dssp EEEEETTSEEEEEETT----TTEEEEEEECSSCSSS---C--------------CEEEECST--------T---EEEEEE
T ss_pred EEEEecCCcEEEEeCC----CCceeeeeccCCCCCc---c--------------eEEEEcCC--------C---cEEEEe
Confidence 999 889999999986 56666666 4554310 0 12333332 3 566665
Q ss_pred ----cCCeEEEEeChh
Q 047036 556 ----VGKFSVIWDFQQ 567 (634)
Q Consensus 556 ----tg~~viiWdl~~ 567 (634)
.++.|.+||+..
T Consensus 239 ~~~~~d~~i~iwd~~~ 254 (402)
T 2aq5_A 239 FSRMSERQVALWDTKH 254 (402)
T ss_dssp ECTTCCEEEEEEETTB
T ss_pred ccCCCCceEEEEcCcc
Confidence 689999999874
No 94
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.88 E-value=2.7e-21 Score=192.93 Aligned_cols=147 Identities=13% Similarity=0.092 Sum_probs=114.0
Q ss_pred eCCcceEEecCCCCCCCCCCcEEEEeCCCCc-EEEEEeccCCC--cceeEEE----EecCCCCCCCCCCCEEEEEeCCCe
Q 047036 314 RGETNMMLMSPLKDGKPQAPGVQQLDIETGK-IVTEWKFEKDG--TDITMRD----ITNDTKSSQLDPSESTFLGLDDNR 386 (634)
Q Consensus 314 ~~D~~mllsss~d~~~~~~~TIrlWDleTGK-~V~~lkgH~~~--V~I~vvs----fsPd~K~~q~~~g~~laSGS~D~t 386 (634)
+.++++|++++.| ++|++||+.+++ .+..+..|... ..+..++ |+|+ +..+++|+.|++
T Consensus 126 s~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--------~~~l~~~~~d~~ 191 (357)
T 3i2n_A 126 GEGAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQE--------ERVVCAGYDNGD 191 (357)
T ss_dssp C-CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-C--------CCEEEEEETTSE
T ss_pred CCCccEEEEEeCC------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCC--------CCEEEEEccCCe
Confidence 3455667777765 799999999997 88999877651 1123445 5566 689999999999
Q ss_pred EEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECC---CC-eEEEEECCCcEEEEecccccccccccc--
Q 047036 387 LCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG---DG-SIVVGSLDGKIRLYSKTSMRQAKTAFP-- 460 (634)
Q Consensus 387 IklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~---dG-~IASGS~DGtIRLWD~~t~r~akt~L~-- 460 (634)
|++||++.+.. +.. ..| ...+.+++++| ++ +|++|+.||.|+|||+.+.+ ....+.
T Consensus 192 i~i~d~~~~~~-~~~-~~~---------------~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~ 253 (357)
T 3i2n_A 192 IKLFDLRNMAL-RWE-TNI---------------KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH-PTKGFASV 253 (357)
T ss_dssp EEEEETTTTEE-EEE-EEC---------------SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE-TTTEEEEE
T ss_pred EEEEECccCce-eee-cCC---------------CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC-cccceeee
Confidence 99999998643 222 222 23578999998 76 89999999999999988753 445554
Q ss_pred ---CCCCCeEEEEECCCCC-EEEE-EcCCcEEEEEcc
Q 047036 461 ---GLGSPITHVDVTYDGK-WILG-TTDTYLILICTL 492 (634)
Q Consensus 461 ---GH~d~ItsVdfSpDGk-~LlS-S~D~tIrLWD~~ 492 (634)
+|..+|++|+|+|+|+ +|++ +.|++|+|||+.
T Consensus 254 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 254 SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 9999999999999999 7888 889999999986
No 95
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.2e-20 Score=199.83 Aligned_cols=162 Identities=10% Similarity=0.073 Sum_probs=129.5
Q ss_pred ceeeEEeCCcceE-EecCCCCCCCCCCcEEEEeCC--CCcEEEEEec--cCCCcceeEEEEecCCCCCCCCCCCEEEEEe
Q 047036 308 KKALLMRGETNMM-LMSPLKDGKPQAPGVQQLDIE--TGKIVTEWKF--EKDGTDITMRDITNDTKSSQLDPSESTFLGL 382 (634)
Q Consensus 308 ~~~mL~~~D~~ml-lsss~d~~~~~~~TIrlWDle--TGK~V~~lkg--H~~~V~I~vvsfsPd~K~~q~~~g~~laSGS 382 (634)
...+.+++++++| ++++.| ++|++||+. +|++++.+.. |...| ..++|+|+ +..|++|+
T Consensus 105 v~~~~~s~d~~~l~~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~v--~~~~~sp~--------~~~l~~~~ 168 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSD------KSLLVFDVDKTSKNVLKLRKRFCFSKRP--NAISIAED--------DTTVIIAD 168 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGG------TEEEEEEECSSSSSCEEEEEEEECSSCE--EEEEECTT--------SSEEEEEE
T ss_pred eEEEEEcCCCCEEEEEECCC------CeEEEEECcCCCCceeeeeecccCCCCc--eEEEEcCC--------CCEEEEEe
Confidence 4556667777776 555554 799999999 9999999984 45554 56799998 67999999
Q ss_pred CCCeEEEEEcCCCCc---eEEecccCCCCccccccccccccCcceEEEEECCC---C-eEEEEECCCcEEEEeccccccc
Q 047036 383 DDNRLCQWDMRDRSG---IVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD---G-SIVVGSLDGKIRLYSKTSMRQA 455 (634)
Q Consensus 383 ~D~tIklWD~R~~~~---~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d---G-~IASGS~DGtIRLWD~~t~r~a 455 (634)
.|+.|++||++.... .+..+.+|. ..+.+++++|+ | +||+|+.|++|||||+.+++ .
T Consensus 169 ~~g~v~~~~~~~~~~~~~~~~~~~~h~---------------~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~-~ 232 (450)
T 2vdu_B 169 KFGDVYSIDINSIPEEKFTQEPILGHV---------------SMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF-I 232 (450)
T ss_dssp TTSEEEEEETTSCCCSSCCCCCSEECS---------------SCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT-C
T ss_pred CCCcEEEEecCCcccccccceeeeccc---------------CceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc-e
Confidence 999999999987542 112343333 34688999998 8 89999999999999998764 4
Q ss_pred cc-cccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecC
Q 047036 456 KT-AFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSG 506 (634)
Q Consensus 456 kt-~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~g 506 (634)
.. .+.+|..+|++|+|+ ||++|++ +.|++|+|||+. +|+++..+..
T Consensus 233 ~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~----~~~~~~~~~~ 280 (450)
T 2vdu_B 233 VDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWK----TGKNLSTFDY 280 (450)
T ss_dssp EEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETT----TCCEEEEEEC
T ss_pred eeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECC----CCcEeeeecc
Confidence 44 477999999999999 9999999 999999999986 6777777754
No 96
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.88 E-value=4.7e-21 Score=194.15 Aligned_cols=210 Identities=13% Similarity=0.162 Sum_probs=147.2
Q ss_pred cEEEeee-C-CCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 257 QSLTLGA-L-DNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 257 ~~LavG~-~-D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
...++.+ + ++.+++.| ..|.+|...... ....+..........|.|.. .+..++++++.+
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----- 165 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ-----TADVFNFEETVYSHHMSPVS-----TKHCLVAVGTRG----- 165 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTE-----EEEEEECSSCEEEEEECSSC-----SSCCEEEEEESS-----
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc-----cceeccCCCceeeeEeecCC-----CCCcEEEEEcCC-----
Confidence 4666666 5 55455543 478888865532 11122211122344444432 344577777665
Q ss_pred CCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCC-EEEEEeCCCeEEEEEcCCCCceEEecccCCCCcc
Q 047036 332 APGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSE-STFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVL 410 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~-~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~ 410 (634)
++|++||+.+++++..+.+|...| ..++|+|+ +. ++++|+.|++|++||++.....+..+..+.....
T Consensus 166 -~~v~~~d~~~~~~~~~~~~~~~~v--~~~~~~~~--------~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 166 -PKVQLCDLKSGSCSHILQGHRQEI--LAVSWSPR--------YDYILATASADSRVKLWDVRRASGCLITLDQHNGKKS 234 (408)
T ss_dssp -SSEEEEESSSSCCCEEECCCCSCE--EEEEECSS--------CTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred -CeEEEEeCCCcceeeeecCCCCcE--EEEEECCC--------CCcEEEEEcCCCcEEEEECCCCCcccccccccccccc
Confidence 689999999999999999999976 45699998 44 6999999999999999987644555543332110
Q ss_pred ccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccc------------------------------------
Q 047036 411 HWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMR------------------------------------ 453 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r------------------------------------ 453 (634)
.........+...+.+++++|+| +||+|+.||.|++||+.+++
T Consensus 235 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (408)
T 4a11_B 235 QAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS 314 (408)
T ss_dssp CCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT
T ss_pred eeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCC
Confidence 00000011244568999999999 79999999999999987642
Q ss_pred ----------cccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcc
Q 047036 454 ----------QAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTL 492 (634)
Q Consensus 454 ----------~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~ 492 (634)
.....+.+|..+|++|+|+|||++|++ +.|++|+|||+.
T Consensus 315 ~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 315 TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPS 364 (408)
T ss_dssp EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEEC
T ss_pred EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCC
Confidence 123345789999999999999999999 899999999975
No 97
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.88 E-value=1.5e-21 Score=202.31 Aligned_cols=220 Identities=11% Similarity=0.131 Sum_probs=142.2
Q ss_pred ceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCc-----------EEEEEeccC------------CCcceeEEEEe
Q 047036 308 KKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGK-----------IVTEWKFEK------------DGTDITMRDIT 364 (634)
Q Consensus 308 ~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK-----------~V~~lkgH~------------~~V~I~vvsfs 364 (634)
...+.++.++++|++++.| ++|++||+.+++ ++.++.+|. ..| ..++|+
T Consensus 31 V~~v~~s~~g~~la~g~~d------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V--~~l~~~ 102 (447)
T 3dw8_B 31 ISTVEFNHSGELLATGDKG------GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKI--NKIRWL 102 (447)
T ss_dssp EEEEEECSSSSEEEEEETT------SEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCC--CEEEEC
T ss_pred EEEEEECCCCCEEEEEcCC------CeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCce--EEEEEc
Confidence 3444555566777777765 799999999988 689999998 766 456999
Q ss_pred cCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEe--cccCCC--------------------------Ccccccccc
Q 047036 365 NDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQN--MVKGDS--------------------------PVLHWTQGH 416 (634)
Q Consensus 365 Pd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~--l~gh~s--------------------------~V~~~~~g~ 416 (634)
|++. ...+++|+.|++|++||++.+...... +.++.. ++..+..+
T Consensus 103 ~~~~------~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 175 (447)
T 3dw8_B 103 PQKN------AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANA- 175 (447)
T ss_dssp CCCS------SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSC-
T ss_pred CCCC------cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccC-
Confidence 9821 168999999999999999763321000 000000 00000011
Q ss_pred ccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccc-------cccCCCCCeEEEEECCCC-CEEEE-EcCCcE
Q 047036 417 QFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKT-------AFPGLGSPITHVDVTYDG-KWILG-TTDTYL 486 (634)
Q Consensus 417 ~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt-------~L~GH~d~ItsVdfSpDG-k~LlS-S~D~tI 486 (634)
+...+.+++++|+| +||+| .||+|+|||+....+... .+.+|..+|++|+|+|+| ++|++ +.|++|
T Consensus 176 ---h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 176 ---HTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp ---CSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ---CCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 33457899999999 78888 799999999874222333 477999999999999999 99999 899999
Q ss_pred EEEEcccccCCCCe----eeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEE
Q 047036 487 ILICTLFSDKDGKT----KTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVI 562 (634)
Q Consensus 487 rLWD~~~~~~~G~~----~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~vii 562 (634)
+|||++ .++. +..|.+|.... .+ .....| .-..+...|++. | ++|+++.++.|.+
T Consensus 252 ~iwd~~----~~~~~~~~~~~~~~~~~~~---~~--~~~~~~------~~~v~~~~~s~~---g---~~l~~~~~~~v~i 310 (447)
T 3dw8_B 252 RLCDMR----ASALCDRHSKLFEEPEDPS---NR--SFFSEI------ISSISDVKFSHS---G---RYMMTRDYLSVKV 310 (447)
T ss_dssp EEEETT----TCSSSCTTCEEECCC--------C--CHHHHH------TTCEEEEEECTT---S---SEEEEEESSEEEE
T ss_pred EEEECc----CCccccceeeEeccCCCcc---cc--cccccc------CceEEEEEECCC---C---CEEEEeeCCeEEE
Confidence 999986 3443 45666654310 00 000000 001223334431 3 5676655599999
Q ss_pred EeChh
Q 047036 563 WDFQQ 567 (634)
Q Consensus 563 Wdl~~ 567 (634)
||+..
T Consensus 311 wd~~~ 315 (447)
T 3dw8_B 311 WDLNM 315 (447)
T ss_dssp EETTC
T ss_pred EeCCC
Confidence 99974
No 98
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.88 E-value=5.1e-21 Score=225.70 Aligned_cols=160 Identities=14% Similarity=0.188 Sum_probs=133.2
Q ss_pred ceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeE
Q 047036 308 KKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRL 387 (634)
Q Consensus 308 ~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tI 387 (634)
...+.+++++++|++++.| ++|++||+.+|+.+.++.+|...| ..++|+|+ +..+++|+.|++|
T Consensus 618 v~~~~~s~~~~~l~s~~~d------~~i~vw~~~~~~~~~~~~~h~~~v--~~~~~s~~--------~~~l~s~~~d~~v 681 (1249)
T 3sfz_A 618 VYHACFSQDGQRIASCGAD------KTLQVFKAETGEKLLDIKAHEDEV--LCCAFSSD--------DSYIATCSADKKV 681 (1249)
T ss_dssp EEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECCCSSCE--EEEEECTT--------SSEEEEEETTSEE
T ss_pred EEEEEECCCCCEEEEEeCC------CeEEEEECCCCCEEEEeccCCCCE--EEEEEecC--------CCEEEEEeCCCeE
Confidence 3344455566777777765 799999999999999999999986 46699998 6799999999999
Q ss_pred EEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCC--C-eEEEEECCCcEEEEeccccccccccccCCCC
Q 047036 388 CQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD--G-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGS 464 (634)
Q Consensus 388 klWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d--G-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d 464 (634)
++||++++. .+..+.+|.. .+.+++++++ + .||+|+.||+|++||+.+++ ....+.+|..
T Consensus 682 ~vwd~~~~~-~~~~~~~~~~---------------~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~-~~~~~~~h~~ 744 (1249)
T 3sfz_A 682 KIWDSATGK-LVHTYDEHSE---------------QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE-CRNTMFGHTN 744 (1249)
T ss_dssp EEEETTTCC-EEEEEECCSS---------------CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS-EEEEECCCSS
T ss_pred EEEECCCCc-eEEEEcCCCC---------------cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc-hhheecCCCC
Confidence 999999865 4677766654 3578899884 3 68999999999999998874 7788999999
Q ss_pred CeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeee
Q 047036 465 PITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGF 504 (634)
Q Consensus 465 ~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF 504 (634)
+|++++|+|||++|++ +.|++|++||+. .++....+
T Consensus 745 ~v~~~~~sp~~~~l~s~s~dg~v~vwd~~----~~~~~~~~ 781 (1249)
T 3sfz_A 745 SVNHCRFSPDDELLASCSADGTLRLWDVR----SANERKSI 781 (1249)
T ss_dssp CEEEEEECSSTTEEEEEESSSEEEEEEGG----GTEEEEEE
T ss_pred CEEEEEEecCCCEEEEEECCCeEEEEeCC----CCccccee
Confidence 9999999999999999 899999999986 45444443
No 99
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.88 E-value=6.1e-21 Score=201.51 Aligned_cols=196 Identities=14% Similarity=0.128 Sum_probs=142.0
Q ss_pred cEEEeee-CC-CeEEEec---CeeeEEEccCC-------ceecceeEEEecCCC-CCcccccCcceeeEEeCCcc-eEEe
Q 047036 257 QSLTLGA-LD-NSFLVSD---LGLQVYRNYNR-------GIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETN-MMLM 322 (634)
Q Consensus 257 ~~LavG~-~D-~sfvv~G---~~igV~k~~~~-------gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~-mlls 322 (634)
.+..+.+ ++ +.+++.| ..|.||..... + .. .....+.+|. .+.+.+|+|. +. +|++
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~-~~-~~~~~~~~h~~~v~~l~~~~~--------~~~~l~s 199 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSG-EC-QPDLRLRGHQKEGYGLSWNPN--------LNGYLLS 199 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTC-CC-CCSEEEECCSSCCCCEEECTT--------STTEEEE
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccc-cC-CCcEEecCCCCCeEEEEeCCC--------CCCeEEE
Confidence 3444555 54 5666654 47999997542 1 01 1233455552 2244455544 34 6677
Q ss_pred cCCCCCCCCCCcEEEEeCCCCcE-------EEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCC
Q 047036 323 SPLKDGKPQAPGVQQLDIETGKI-------VTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDR 395 (634)
Q Consensus 323 ss~d~~~~~~~TIrlWDleTGK~-------V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~ 395 (634)
++.| ++|++||+.+++. +..+.+|...| ..++|+|+. +.++++|+.|++|++||+|..
T Consensus 200 ~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v--~~v~~~p~~-------~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 200 ASDD------HTICLWDINATPKEHRVIDAKNIFTGHTAVV--EDVAWHLLH-------ESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp ECTT------SCEEEEETTSCCBGGGEEECSEEECCCSSCE--EEEEECSSC-------TTEEEEEETTSEEEEEETTCS
T ss_pred EeCC------CeEEEEeCCCCCCCCceeccceeecCCCCCE--eeeEEeCCC-------CCEEEEEeCCCeEEEEECCCC
Confidence 7664 7999999998432 56788999876 466999952 479999999999999999976
Q ss_pred C--ceEEecccCCCCccccccccccccCcceEEEEECCCC--eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEE
Q 047036 396 S--GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG--SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDV 471 (634)
Q Consensus 396 ~--~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG--~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdf 471 (634)
. ..+..+..|. ..+++++++|++ .||+|+.||+|+|||+.+.+.....+.+|..+|++|+|
T Consensus 265 ~~~~~~~~~~~~~---------------~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~ 329 (430)
T 2xyi_A 265 NTSKPSHTVDAHT---------------AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW 329 (430)
T ss_dssp CSSSCSEEEECCS---------------SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEE
T ss_pred CCCcceeEeecCC---------------CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEE
Confidence 3 3344444443 346899999987 48999999999999988744466788899999999999
Q ss_pred CCCCC-EEEE-EcCCcEEEEEcc
Q 047036 472 TYDGK-WILG-TTDTYLILICTL 492 (634)
Q Consensus 472 SpDGk-~LlS-S~D~tIrLWD~~ 492 (634)
+|+|+ +|++ +.|++|+|||+.
T Consensus 330 sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 330 SPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp CSSCTTEEEEEETTSCCEEEEGG
T ss_pred CCCCCCEEEEEeCCCcEEEEeCC
Confidence 99996 4667 889999999986
No 100
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.88 E-value=8.7e-22 Score=205.22 Aligned_cols=159 Identities=13% Similarity=0.161 Sum_probs=125.3
Q ss_pred EeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEec--cCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEE
Q 047036 313 MRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKF--EKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQW 390 (634)
Q Consensus 313 ~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkg--H~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklW 390 (634)
.+.++++|++++.| ++|++||+.+++++.++.+ |...| ..++|+|+ +..+++|+.|++|++|
T Consensus 178 ~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h~~~v--~~~~~s~~--------~~~l~s~~~dg~i~iw 241 (437)
T 3gre_A 178 VNEEKSLLVALTNL------SRVIIFDIRTLERLQIIENSPRHGAV--SSICIDEE--------CCVLILGTTRGIIDIW 241 (437)
T ss_dssp ECSSCEEEEEEETT------SEEEEEETTTCCEEEEEECCGGGCCE--EEEEECTT--------SCEEEEEETTSCEEEE
T ss_pred EcCCCCEEEEEeCC------CeEEEEeCCCCeeeEEEccCCCCCce--EEEEECCC--------CCEEEEEcCCCeEEEE
Confidence 44677888888775 7999999999999999999 88875 56699998 6799999999999999
Q ss_pred EcCCCCceEEecc-cCCCCccccccccccccCcceEEEEE----CCCC-eEEEEECCCcEEEEecccccccccccc----
Q 047036 391 DMRDRSGIVQNMV-KGDSPVLHWTQGHQFSRGTNFQCFAS----TGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFP---- 460 (634)
Q Consensus 391 D~R~~~~~Vq~l~-gh~s~V~~~~~g~~y~~~~~fssva~----s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~---- 460 (634)
|++.+. ++..+. +| ...+.++++ +++| +||+|+.||+|+|||+.+++ ....+.
T Consensus 242 d~~~~~-~~~~~~~~~---------------~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~ 304 (437)
T 3gre_A 242 DIRFNV-LIRSWSFGD---------------HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH-CQYAFINSDE 304 (437)
T ss_dssp ETTTTE-EEEEEBCTT---------------CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE-EEEEEESSSS
T ss_pred EcCCcc-EEEEEecCC---------------CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc-EEEEEEcCCC
Confidence 999854 455543 22 224677744 4567 79999999999999998653 333332
Q ss_pred --------------------C--CCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCC
Q 047036 461 --------------------G--LGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMG 509 (634)
Q Consensus 461 --------------------G--H~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~ 509 (634)
| |..+|++|+|+ +|++|++ +.|++|++||+. +++++..+.+|..
T Consensus 305 ~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~----~~~~~~~~~~~~~ 371 (437)
T 3gre_A 305 QPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLN----ELSSSKAVISPSR 371 (437)
T ss_dssp CCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETT----CGGGCEEEECC--
T ss_pred CCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECC----CcccceEEecccc
Confidence 3 67779999999 8899999 789999999986 6777788887753
No 101
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=2.2e-22 Score=210.79 Aligned_cols=223 Identities=9% Similarity=-0.020 Sum_probs=135.2
Q ss_pred ecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCC
Q 047036 294 FDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQL 372 (634)
Q Consensus 294 ~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~ 372 (634)
+.+|. ++.+++|+|........|+++|++++.| +|||+||+.+++.+..+.+|...| ..++|+|++
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D------~tv~~Wd~~~~~~~~~~~~~~~~v--~~v~~~p~~----- 198 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD------CTLIIWRLTDEGPILAGYPLSSPG--ISVQFRPSN----- 198 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT------SEEEEEEEETTEEEEEEEECSSCE--EEEEEETTE-----
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECC------CeEEEEECCCCceeeeecCCCCCc--EEEEECCCC-----
Confidence 34552 3477888886554445577888888876 799999999999999888998876 356999982
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCCceEEecccCC----CCccccccc------cccccCcceEEEEEC-CCC-eEEEEEC
Q 047036 373 DPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGD----SPVLHWTQG------HQFSRGTNFQCFAST-GDG-SIVVGSL 440 (634)
Q Consensus 373 ~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~----s~V~~~~~g------~~y~~~~~fssva~s-~dG-~IASGS~ 440 (634)
..+|++|+.|++|++||++++... ..+..+. ..+...... ..-.+...+.++++. ++| +|++++.
T Consensus 199 --~~~l~~~~~d~~v~~wd~~t~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~ 275 (393)
T 4gq1_A 199 --PNQLIVGERNGNIRIFDWTLNLSA-EENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCK 275 (393)
T ss_dssp --EEEEEEEETTSEEEEEETTCCC-----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECT
T ss_pred --CceEEecCCCCEEEEEECCCCccc-ccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeC
Confidence 248999999999999999986542 2222111 111100000 000012234566664 787 7999999
Q ss_pred CCcEEEEeccccccccccccCCCCCeEEEEECCC--------------------CCEEEE-EcCCcEEEEEcccccCCCC
Q 047036 441 DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYD--------------------GKWILG-TTDTYLILICTLFSDKDGK 499 (634)
Q Consensus 441 DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpD--------------------Gk~LlS-S~D~tIrLWD~~~~~~~G~ 499 (634)
|++|++||+.+.+ ....|.+|...+..+.++|+ +.++++ +.|++|+|||+. .|+
T Consensus 276 d~~i~vwd~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~----~~~ 350 (393)
T 4gq1_A 276 SGAWLRWNLFANN-DYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTY----EKD 350 (393)
T ss_dssp TSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETT----CTT
T ss_pred CCCEEEEECccCC-CCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECC----CCc
Confidence 9999999998764 56677788877777777664 345666 679999999986 455
Q ss_pred eeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeCh
Q 047036 500 TKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQ 566 (634)
Q Consensus 500 ~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~ 566 (634)
++..+.+|.. | ...+.|+|+ | +.|++++++.+++|.|.
T Consensus 351 ~~~~~~~~~~---~---------------V~svafspd--------G---~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 351 SNSIPIQLGM---P---------------IVDFCWHQD--------G---SHLAIATEGSVLLTRLM 388 (393)
T ss_dssp CCEEEEECSS---C---------------EEEEEECTT--------S---SEEEEEESSEEEEEEEG
T ss_pred EEEEecCCCC---c---------------EEEEEEcCC--------C---CEEEEEeCCCeEEEEEe
Confidence 5555544432 1 023555555 4 67888778888888765
No 102
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1e-20 Score=188.57 Aligned_cols=193 Identities=10% Similarity=0.044 Sum_probs=144.5
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEE
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQW 390 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklW 390 (634)
+.+++++++|++++.| ++|++||+.+|+.+.++.+|...| ..++|+|+ +..+++|+.|++|++|
T Consensus 38 ~~~s~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~h~~~v--~~~~~~~~--------~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 38 VKYNKEGDLLFSCSKD------SSASVWYSLNGERLGTLDGHTGTI--WSIDVDCF--------TKYCVTGSADYSIKLW 101 (369)
T ss_dssp EEECTTSCEEEEEESS------SCEEEEETTTCCEEEEECCCSSCE--EEEEECTT--------SSEEEEEETTTEEEEE
T ss_pred EEEcCCCCEEEEEeCC------CEEEEEeCCCchhhhhhhhcCCcE--EEEEEcCC--------CCEEEEEeCCCeEEEE
Confidence 3334445667777665 689999999999999999999986 45699998 6799999999999999
Q ss_pred EcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECC-----CcEEEEecccccc----------
Q 047036 391 DMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLD-----GKIRLYSKTSMRQ---------- 454 (634)
Q Consensus 391 D~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~D-----GtIRLWD~~t~r~---------- 454 (634)
|++++.. +..+. ....+.+++++++| +|++++.+ |.|++||+...+.
T Consensus 102 d~~~~~~-~~~~~----------------~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 164 (369)
T 3zwl_B 102 DVSNGQC-VATWK----------------SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEE 164 (369)
T ss_dssp ETTTCCE-EEEEE----------------CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSS
T ss_pred ECCCCcE-EEEee----------------cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccc
Confidence 9998654 44442 23357899999999 79999999 9999999876421
Q ss_pred ccccccCCCC--CeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCC
Q 047036 455 AKTAFPGLGS--PITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTD 531 (634)
Q Consensus 455 akt~L~GH~d--~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~ 531 (634)
....+.+|.. .|++++|+|+|++|++ +.|++|++||+.. .++.+..+.+|.+.. ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~~v------------------~~ 223 (369)
T 3zwl_B 165 PIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSN---NYEYVDSIDLHEKSI------------------SD 223 (369)
T ss_dssp CSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTT---TTEEEEEEECCSSCE------------------EE
T ss_pred eeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCC---CcEeEEEEecCCCce------------------eE
Confidence 2234556666 9999999999999999 8999999999861 255555555554210 12
Q ss_pred cccccccccccccCCCCceEEEEEcCCeEEEEeChh
Q 047036 532 NKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQ 567 (634)
Q Consensus 532 i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~ 567 (634)
+.|+|. + ...++++.++.|.+||+..
T Consensus 224 ~~~~~~--------~--~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 224 MQFSPD--------L--TYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp EEECTT--------S--SEEEEEETTSEEEEEETTT
T ss_pred EEECCC--------C--CEEEEecCCceEEEEECCC
Confidence 344443 2 2345557799999999874
No 103
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.88 E-value=3.3e-20 Score=193.07 Aligned_cols=230 Identities=13% Similarity=0.117 Sum_probs=161.2
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQA 332 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~ 332 (634)
...++.+ +|+.+++.| ..|.||...... ....+.+|. .+...+.+ +.++|++++.|
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~~~-------~~v~~~~~--~~~~l~~~~~d------ 195 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQT-----KLRTMAGHQ-------ARVGCLSW--NRHVLSSGSRS------ 195 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCC-----EEEEECCCS-------SCEEEEEE--ETTEEEEEETT------
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECcCCe-----EEEEecCCC-------CceEEEEE--CCCEEEEEcCC------
Confidence 3566666 677666654 478888765433 233444442 12233333 34577777765
Q ss_pred CcEEEEeCC-CCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 333 PGVQQLDIE-TGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 333 ~TIrlWDle-TGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
++|++||+. .++.+..+.+|...| ..++|+|+ +..+++|+.|++|++||++.+.. +..+.+|..+
T Consensus 196 g~i~i~d~~~~~~~~~~~~~~~~~v--~~~~~~~~--------~~~l~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~--- 261 (401)
T 4aez_A 196 GAIHHHDVRIANHQIGTLQGHSSEV--CGLAWRSD--------GLQLASGGNDNVVQIWDARSSIP-KFTKTNHNAA--- 261 (401)
T ss_dssp SEEEEEETTSSSCEEEEEECCSSCE--EEEEECTT--------SSEEEEEETTSCEEEEETTCSSE-EEEECCCSSC---
T ss_pred CCEEEEecccCcceeeEEcCCCCCe--eEEEEcCC--------CCEEEEEeCCCeEEEccCCCCCc-cEEecCCcce---
Confidence 799999999 578899999999976 56699998 67999999999999999998653 5566555443
Q ss_pred cccccccccCcceEEEEECCCC--eEEEEE--CCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-E--cCC
Q 047036 412 WTQGHQFSRGTNFQCFASTGDG--SIVVGS--LDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-T--TDT 484 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~dG--~IASGS--~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S--~D~ 484 (634)
+.+++++|++ .|++|+ .||.|++||+.+++ ....+. |..+|++|+|+|+|++|++ + .|+
T Consensus 262 ------------v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~-~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg 327 (401)
T 4aez_A 262 ------------VKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA-RVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDN 327 (401)
T ss_dssp ------------CCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC-EEEEEE-CSSCEEEEEECSSSSEEEEEECTTTC
T ss_pred ------------EEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC-EEEEEe-CCCcEEEEEECCCCCeEEEEeecCCC
Confidence 5788999976 466765 79999999998764 555665 6788999999999999998 4 599
Q ss_pred cEEEEEcccccCCCCeee--eecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEE-EcCCeEE
Q 047036 485 YLILICTLFSDKDGKTKT--GFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVA-TVGKFSV 561 (634)
Q Consensus 485 tIrLWD~~~~~~~G~~~~--gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~Ivt-Stg~~vi 561 (634)
+|+|||+. .++... .+.+|.+. ...+.|+|. | .+|++ +.|+.|.
T Consensus 328 ~i~v~~~~----~~~~~~~~~~~~h~~~------------------v~~~~~s~d--------g---~~l~s~~~dg~i~ 374 (401)
T 4aez_A 328 NLSIWSYS----SSGLTKQVDIPAHDTR------------------VLYSALSPD--------G---RILSTAASDENLK 374 (401)
T ss_dssp EEEEEEEE----TTEEEEEEEEECCSSC------------------CCEEEECTT--------S---SEEEEECTTSEEE
T ss_pred cEEEEecC----CccceeEEEecCCCCC------------------EEEEEECCC--------C---CEEEEEeCCCcEE
Confidence 99999975 333222 23333321 012444443 3 45554 6799999
Q ss_pred EEeChh
Q 047036 562 IWDFQQ 567 (634)
Q Consensus 562 iWdl~~ 567 (634)
+|++..
T Consensus 375 iw~~~~ 380 (401)
T 4aez_A 375 FWRVYD 380 (401)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999873
No 104
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=6.9e-22 Score=231.12 Aligned_cols=218 Identities=8% Similarity=0.024 Sum_probs=146.3
Q ss_pred CCcceEEecCCCCCCCCCCcEEEEeCCCCcEE--EEE----e-----ccCCCcceeEEEEecCCCCCCCCCCCEEEEEeC
Q 047036 315 GETNMMLMSPLKDGKPQAPGVQQLDIETGKIV--TEW----K-----FEKDGTDITMRDITNDTKSSQLDPSESTFLGLD 383 (634)
Q Consensus 315 ~D~~mllsss~d~~~~~~~TIrlWDleTGK~V--~~l----k-----gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~ 383 (634)
+++++|++++.| ++||+||+.+|++. ..+ . +|...| ..++|+|| ++.||+|+.
T Consensus 445 pdg~~laSgs~D------gtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V--~svafspd--------g~~LAsgs~ 508 (902)
T 2oaj_A 445 EYGTAFITGHSN------GSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAV--DKISFAAE--------TLELAVSIE 508 (902)
T ss_dssp SEEEEEEEEETT------SEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCE--EEEEEETT--------TTEEEEEET
T ss_pred ccCcEEEEecCC------CcEEEEECCCccccCCceEEeechhhcCCCCCCce--eEEEecCC--------CCeEEEEec
Confidence 344567777775 79999999998532 112 2 888876 46699999 679999999
Q ss_pred CCeEEEEEcCCCCc--------------------------------------------eEEecccCCCCccccccccccc
Q 047036 384 DNRLCQWDMRDRSG--------------------------------------------IVQNMVKGDSPVLHWTQGHQFS 419 (634)
Q Consensus 384 D~tIklWD~R~~~~--------------------------------------------~Vq~l~gh~s~V~~~~~g~~y~ 419 (634)
|++|++||+.++.. ++..+.+|
T Consensus 509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h-------------- 574 (902)
T 2oaj_A 509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHAN-------------- 574 (902)
T ss_dssp TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCC--------------
T ss_pred CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcC--------------
Confidence 99999999975420 12333333
Q ss_pred cCcceEEEEECCCCeEEEEECCCcEEEEecccccccc-----cccc-CCCCCeEEEEEC-----CCC---CEEEE-EcCC
Q 047036 420 RGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAK-----TAFP-GLGSPITHVDVT-----YDG---KWILG-TTDT 484 (634)
Q Consensus 420 ~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~ak-----t~L~-GH~d~ItsVdfS-----pDG---k~LlS-S~D~ 484 (634)
...+++++|+|+|+||+|+.||+|||||+.+.. .. ..+. ||...|++|+|| ||| ++|++ |.|+
T Consensus 575 -~~~V~svafSpdG~lAsgs~D~tv~lwd~~~~~-~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~ 652 (902)
T 2oaj_A 575 -KGKTSAINNSNIGFVGIAYAAGSLMLIDRRGPA-IIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMG 652 (902)
T ss_dssp -SCSEEEEEECBTSEEEEEETTSEEEEEETTTTE-EEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTS
T ss_pred -CCcEEEEEecCCcEEEEEeCCCcEEEEECCCCe-EEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCC
Confidence 335789999999999999999999999987642 21 3465 999999999999 886 89999 9999
Q ss_pred cEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEe
Q 047036 485 YLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWD 564 (634)
Q Consensus 485 tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWd 564 (634)
+|++||+.+ ..+|+++..|.+|..-+.. ...+.+.|-+.. .+....=+...|.+........-.++++++..+.||+
T Consensus 653 tv~~wd~~p-~~~g~~~~~~~~~~~~~~~-~~v~~i~~~~~~-~~~~~~a~~~~~~~l~~~~~~~~~~l~~~~~~ir~~~ 729 (902)
T 2oaj_A 653 EVITYKILP-ASGGKFDVQLMDITNVTSK-GPIHKIDAFSKE-TKSSCLATIPKMQNLSKGLCIPGIVLITGFDDIRLIT 729 (902)
T ss_dssp EEEEEEEEE-CGGGCEEEEEEEEEECCSS-CCCCEEEEEETT-TCCBCBCBHHHHHGGGGTCCCCEEEEEECSSEEEEEC
T ss_pred cEEEEEEec-CCCCcEEEEecCceecCCC-CceEEEEeEecC-CCCcccCCHHHHhccCCCCCCCeEEEEEeccceEEEe
Confidence 999999843 2378899999998631101 122333332210 0000000001111100001122456666799999999
Q ss_pred Chh
Q 047036 565 FQQ 567 (634)
Q Consensus 565 l~~ 567 (634)
+.+
T Consensus 730 ~~~ 732 (902)
T 2oaj_A 730 LGK 732 (902)
T ss_dssp TTC
T ss_pred Ccc
Confidence 975
No 105
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=4.9e-21 Score=223.94 Aligned_cols=232 Identities=11% Similarity=0.041 Sum_probs=137.6
Q ss_pred eccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceE--EecccCCCCccccccccccccCcceEEE
Q 047036 350 KFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIV--QNMVKGDSPVLHWTQGHQFSRGTNFQCF 427 (634)
Q Consensus 350 kgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~V--q~l~gh~s~V~~~~~g~~y~~~~~fssv 427 (634)
.||...|. .++|+|+ ++.|+||+.|++||+||+..+. +. ..+.-.-...+ ..+ +...+.++
T Consensus 432 ~G~~~~v~--sv~~spd--------g~~laSgs~DgtVrlWd~~~g~-~~~~~~~~~~l~~~~--~~~----h~~~V~sv 494 (902)
T 2oaj_A 432 KGGVRTKR--QKLPAEY--------GTAFITGHSNGSVRIYDASHGD-IQDNASFEVNLSRTL--NKA----KELAVDKI 494 (902)
T ss_dssp CCSBCCCC--CCCCCSE--------EEEEEEEETTSEEEEEESSCCT-TTTTBCEEEEHHHHT--TCS----SSCCEEEE
T ss_pred cCCcCCCC--ccccccc--------CcEEEEecCCCcEEEEECCCcc-ccCCceEEeechhhc--CCC----CCCceeEE
Confidence 44444432 2366676 6799999999999999998752 10 00000000000 001 23357899
Q ss_pred EECCCC-eEEEEECCCcEEEEeccccc--------------------------------------------cccccccCC
Q 047036 428 ASTGDG-SIVVGSLDGKIRLYSKTSMR--------------------------------------------QAKTAFPGL 462 (634)
Q Consensus 428 a~s~dG-~IASGS~DGtIRLWD~~t~r--------------------------------------------~akt~L~GH 462 (634)
+|+|+| +||+|+.||+|||||+.+++ ++..+|.+|
T Consensus 495 afspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h 574 (902)
T 2oaj_A 495 SFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHAN 574 (902)
T ss_dssp EEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCC
T ss_pred EecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcC
Confidence 999999 89999999999999987642 124678899
Q ss_pred CCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCee-----eeec-CCCCCCCCCceeEeecCCCccccCCCcccc
Q 047036 463 GSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTK-----TGFS-GRMGNKIPAPRLLKLTPLDSHLAGTDNKIH 535 (634)
Q Consensus 463 ~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~-----~gF~-gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft 535 (634)
..+|++|+||||| +||+ +.|++|+|||+. .+..+ .+|. ||.+. ...+.|+
T Consensus 575 ~~~V~svafSpdG-~lAsgs~D~tv~lwd~~----~~~~~~~~~~~~~~~gh~~~------------------V~sv~Fs 631 (902)
T 2oaj_A 575 KGKTSAINNSNIG-FVGIAYAAGSLMLIDRR----GPAIIYMENIREISGAQSAC------------------VTCIEFV 631 (902)
T ss_dssp SCSEEEEEECBTS-EEEEEETTSEEEEEETT----TTEEEEEEEGGGTCSSCCCC------------------EEEEEEE
T ss_pred CCcEEEEEecCCc-EEEEEeCCCcEEEEECC----CCeEEEEeehhHhccccccc------------------eEEEEEE
Confidence 9999999999999 9998 899999999974 22222 1332 44321 1246666
Q ss_pred cccccccccCCCCceEEEE-EcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeec-cccC--------
Q 047036 536 GGHFSWVTENGKQERHLVA-TVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESR-FMHD-------- 605 (634)
Q Consensus 536 ~a~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~-f~~d-------- 605 (634)
-....+ +|...++|++ +.|+.|++||+..-..|+... .........+...|..+. |-.+
T Consensus 632 ~~~~~~---Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~--------~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~ 700 (902)
T 2oaj_A 632 IMEYGD---DGYSSILMVCGTDMGEVITYKILPASGGKFDV--------QLMDITNVTSKGPIHKIDAFSKETKSSCLAT 700 (902)
T ss_dssp EEECTT---SSSEEEEEEEEETTSEEEEEEEEECGGGCEEE--------EEEEEEECCSSCCCCEEEEEETTTCCBCBCB
T ss_pred EEecCC---CCCcceEEEEEecCCcEEEEEEecCCCCcEEE--------EecCceecCCCCceEEEEeEecCCCCcccCC
Confidence 111111 0212356655 679999999982211332110 000111111234555444 3111
Q ss_pred -----ccccCCCCCCCEEEEcCCceeeeeccC
Q 047036 606 -----KFAVTDSPEAPLVVATPMKVSSISLSG 632 (634)
Q Consensus 606 -----~f~~~~~~~~~iivA~~~~v~~~~~~~ 632 (634)
+..-+..++..||+++...|..+++..
T Consensus 701 ~~~~~~l~~~~~~~~~~l~~~~~~ir~~~~~~ 732 (902)
T 2oaj_A 701 IPKMQNLSKGLCIPGIVLITGFDDIRLITLGK 732 (902)
T ss_dssp HHHHHGGGGTCCCCEEEEEECSSEEEEECTTC
T ss_pred HHHHhccCCCCCCCeEEEEEeccceEEEeCcc
Confidence 111123345679999999998888753
No 106
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.88 E-value=3.1e-20 Score=199.37 Aligned_cols=265 Identities=11% Similarity=0.023 Sum_probs=182.4
Q ss_pred EEEeee-C--CCeEEEec---CeeeEEEccCCc----eecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCC
Q 047036 258 SLTLGA-L--DNSFLVSD---LGLQVYRNYNRG----IHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKD 327 (634)
Q Consensus 258 ~LavG~-~--D~sfvv~G---~~igV~k~~~~g----l~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~ 327 (634)
..++.+ + |+.+++.| ..|.||....+. +. ......+..|. .|...+.+++++++|++++.+.
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~~~~~~~~-------~~v~~~~~s~~~~~l~~~~~~~ 138 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVE-VNVKSEFQVLA-------GPISDISWDFEGRRLCVVGEGR 138 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEE-EEEEEEEECCS-------SCEEEEEECTTSSEEEEEECCS
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccccccc-ccccchhhccc-------ccEEEEEEeCCCCEEEEeccCC
Confidence 667777 7 88888865 478888864320 00 01223344331 2344445555666677766542
Q ss_pred CCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCC-EEEEEeCCCeEEEEEcCCCCceEEecccCC
Q 047036 328 GKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSE-STFLGLDDNRLCQWDMRDRSGIVQNMVKGD 406 (634)
Q Consensus 328 ~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~-~laSGS~D~tIklWD~R~~~~~Vq~l~gh~ 406 (634)
...+.|++|| +++.+..+.+|...| ..++|+|+ +. .+++|+.|++|++||++... .+..+.+|.
T Consensus 139 --~~~~~v~~~d--~~~~~~~~~~~~~~v--~~~~~~~~--------~~~~l~~~~~d~~v~vwd~~~~~-~~~~~~~~~ 203 (615)
T 1pgu_A 139 --DNFGVFISWD--SGNSLGEVSGHSQRI--NACHLKQS--------RPMRSMTVGDDGSVVFYQGPPFK-FSASDRTHH 203 (615)
T ss_dssp --SCSEEEEETT--TCCEEEECCSCSSCE--EEEEECSS--------SSCEEEEEETTTEEEEEETTTBE-EEEEECSSS
T ss_pred --CCccEEEEEE--CCCcceeeecCCccE--EEEEECCC--------CCcEEEEEeCCCcEEEEeCCCcc-eeeeecccC
Confidence 1225788888 789999999999976 56699998 44 89999999999999998754 456666554
Q ss_pred CCccccccccccccCcceEEEEECCC-C-eEEEEECCCcEEEEeccccccccccc-c---CCCCCeEEEEECCCCCEEEE
Q 047036 407 SPVLHWTQGHQFSRGTNFQCFASTGD-G-SIVVGSLDGKIRLYSKTSMRQAKTAF-P---GLGSPITHVDVTYDGKWILG 480 (634)
Q Consensus 407 s~V~~~~~g~~y~~~~~fssva~s~d-G-~IASGS~DGtIRLWD~~t~r~akt~L-~---GH~d~ItsVdfSpDGk~LlS 480 (634)
. ....+.+++++|+ | +||+|+.||.|++||+.+++ ....+ . +|..+|++|+|+ +|++|++
T Consensus 204 ~------------~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~ 269 (615)
T 1pgu_A 204 K------------QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE-FLKYIEDDQEPVQGGIFALSWL-DSQKFAT 269 (615)
T ss_dssp C------------TTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC-EEEECCBTTBCCCSCEEEEEES-SSSEEEE
T ss_pred C------------CCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC-EeEEecccccccCCceEEEEEc-CCCEEEE
Confidence 3 0114689999999 8 79999999999999998864 66667 6 899999999999 9999999
Q ss_pred -EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCe
Q 047036 481 -TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKF 559 (634)
Q Consensus 481 -S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~ 559 (634)
+.|++|++||+. +++.+..|..+.... ........|+. + ...++++.++.
T Consensus 270 ~~~d~~i~~wd~~----~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~----~--~~l~~~~~~g~ 320 (615)
T 1pgu_A 270 VGADATIRVWDVT----TSKCVQKWTLDKQQL-------------------GNQQVGVVATG----N--GRIISLSLDGT 320 (615)
T ss_dssp EETTSEEEEEETT----TTEEEEEEECCTTCG-------------------GGCEEEEEEEE----T--TEEEEEETTSC
T ss_pred EcCCCcEEEEECC----CCcEEEEEcCCCCcc-------------------cCceeEEEeCC----C--CeEEEEECCCC
Confidence 889999999986 577666666553110 00111122221 2 34556678999
Q ss_pred EEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeeccccC
Q 047036 560 SVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHD 605 (634)
Q Consensus 560 viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~~d 605 (634)
|.+||+.. ++. .+.+..+...|..+.| .+
T Consensus 321 i~~~d~~~---~~~-------------~~~~~~~~~~v~~~~~-~~ 349 (615)
T 1pgu_A 321 LNFYELGH---DEV-------------LKTISGHNKGITALTV-NP 349 (615)
T ss_dssp EEEEETTE---EEE-------------EEEECCCSSCEEEEET-TT
T ss_pred EEEEECCC---CcE-------------EEEEeCCCCCEEEEEe-cC
Confidence 99999874 221 1355666666666666 44
No 107
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.88 E-value=1.1e-20 Score=198.67 Aligned_cols=215 Identities=14% Similarity=0.162 Sum_probs=160.0
Q ss_pred CCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCC
Q 047036 315 GETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRD 394 (634)
Q Consensus 315 ~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~ 394 (634)
.++++|++++.| ++|++||+.+|+++..+.+|...| .+++.+ +..+++|+.|++|++||+++
T Consensus 141 ~d~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~h~~~v----~~l~~~--------~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 141 YDDQKIVSGLRD------NTIKIWDKNTLECKRILTGHTGSV----LCLQYD--------ERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp CCSSEEEEEESS------SCEEEEESSSCCEEEEECCCSSCE----EEEECC--------SSEEEEEETTSCEEEEESSS
T ss_pred ECCCEEEEEeCC------CeEEEEeCCCCeEEEEEcCCCCcE----EEEEEC--------CCEEEEEcCCCeEEEEECCC
Confidence 356778888765 799999999999999999999865 244445 57999999999999999998
Q ss_pred CCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEecccccccc---ccccCCCCCeEEEEE
Q 047036 395 RSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAK---TAFPGLGSPITHVDV 471 (634)
Q Consensus 395 ~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~ak---t~L~GH~d~ItsVdf 471 (634)
+. .+..+.+|... +.+++++ ++.||+|+.||+|++||+.+.+ .. ..+.+|..+|++|+|
T Consensus 203 ~~-~~~~~~~h~~~---------------v~~l~~~-~~~l~s~s~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~ 264 (435)
T 1p22_A 203 GE-MLNTLIHHCEA---------------VLHLRFN-NGMMVTCSKDRSIAVWDMASPT-DITLRRVLVGHRAAVNVVDF 264 (435)
T ss_dssp CC-EEEEECCCCSC---------------EEEEECC-TTEEEEEETTSCEEEEECSSSS-CCEEEEEECCCSSCEEEEEE
T ss_pred Cc-EEEEEcCCCCc---------------EEEEEEc-CCEEEEeeCCCcEEEEeCCCCC-CceeeeEecCCCCcEEEEEe
Confidence 75 46777665543 5677776 4599999999999999988753 33 567899999999999
Q ss_pred CCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCce
Q 047036 472 TYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQER 550 (634)
Q Consensus 472 SpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~ 550 (634)
+|++|++ +.|++|++||+. +++.+..|.+|.+.. ..+.| + + ..
T Consensus 265 --~~~~l~s~~~dg~i~vwd~~----~~~~~~~~~~~~~~v------------------~~~~~-----~-----~--~~ 308 (435)
T 1p22_A 265 --DDKYIVSASGDRTIKVWNTS----TCEFVRTLNGHKRGI------------------ACLQY-----R-----D--RL 308 (435)
T ss_dssp --ETTEEEEEETTSEEEEEETT----TCCEEEEEECCSSCE------------------EEEEE-----E-----T--TE
T ss_pred --CCCEEEEEeCCCeEEEEECC----cCcEEEEEcCCCCcE------------------EEEEe-----C-----C--CE
Confidence 8999999 899999999986 677787787775311 01222 2 2 24
Q ss_pred EEEEEcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeeccccCccccCCCCCCCEE
Q 047036 551 HLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHDKFAVTDSPEAPLV 618 (634)
Q Consensus 551 ~IvtStg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f~~d~f~~~~~~~~~ii 618 (634)
.++++.|+.|.+||+.. ++. ...+..+...|..+.| .+++.+..+.|..|.
T Consensus 309 l~~g~~dg~i~iwd~~~---~~~-------------~~~~~~h~~~v~~~~~-~~~~l~sg~~dg~i~ 359 (435)
T 1p22_A 309 VVSGSSDNTIRLWDIEC---GAC-------------LRVLEGHEELVRCIRF-DNKRIVSGAYDGKIK 359 (435)
T ss_dssp EEEEETTSCEEEEETTT---CCE-------------EEEECCCSSCEEEEEC-CSSEEEEEETTSCEE
T ss_pred EEEEeCCCeEEEEECCC---CCE-------------EEEEeCCcCcEEEEEe-cCCEEEEEeCCCcEE
Confidence 55567899999999974 322 2456778888888887 555533333344443
No 108
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.87 E-value=1.7e-20 Score=186.92 Aligned_cols=222 Identities=9% Similarity=0.091 Sum_probs=150.0
Q ss_pred CCcEEEeee-CC---CeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCC
Q 047036 255 GVQSLTLGA-LD---NSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKD 327 (634)
Q Consensus 255 ~~~~LavG~-~D---~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~ 327 (634)
.....++.+ ++ +.+++.| ..|.||.....+.. ....+.+|. .+...+.+++++++|++++.|
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~h~-------~~v~~~~~~~~~~~l~s~~~d- 107 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQT---IPKAQQMHT-------GPVLDVCWSDDGSKVFTASCD- 107 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCE---EEEEEEECS-------SCEEEEEECTTSSEEEEEETT-
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCce---eEEEecccc-------CCEEEEEECcCCCEEEEEcCC-
Confidence 345778888 66 4777765 47999997653411 112344442 233344445566677777765
Q ss_pred CCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEE--ecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccC
Q 047036 328 GKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDI--TNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKG 405 (634)
Q Consensus 328 ~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsf--sPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh 405 (634)
++|++||+.+++++. +.+|...| ..++| +|+ +..+++|+.|++|++||++++.. +..+..|
T Consensus 108 -----g~v~iwd~~~~~~~~-~~~~~~~v--~~~~~~~~~~--------~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~ 170 (368)
T 3mmy_A 108 -----KTAKMWDLSSNQAIQ-IAQHDAPV--KTIHWIKAPN--------YSCVMTGSWDKTLKFWDTRSSNP-MMVLQLP 170 (368)
T ss_dssp -----SEEEEEETTTTEEEE-EEECSSCE--EEEEEEECSS--------CEEEEEEETTSEEEEECSSCSSC-SEEEECS
T ss_pred -----CcEEEEEcCCCCcee-eccccCce--EEEEEEeCCC--------CCEEEEccCCCcEEEEECCCCcE-EEEEecC
Confidence 799999999999877 66798876 45688 666 57899999999999999998653 3455433
Q ss_pred CCC------------------cccccc--c-c-----ccccCcceEEEEECCCC-e----EEEEECCCcEEEEeccccc-
Q 047036 406 DSP------------------VLHWTQ--G-H-----QFSRGTNFQCFASTGDG-S----IVVGSLDGKIRLYSKTSMR- 453 (634)
Q Consensus 406 ~s~------------------V~~~~~--g-~-----~y~~~~~fssva~s~dG-~----IASGS~DGtIRLWD~~t~r- 453 (634)
... +..|.. . . .........++++.+++ . ||+|+.||.|++||+....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~ 250 (368)
T 3mmy_A 171 ERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250 (368)
T ss_dssp SCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH
T ss_pred CCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc
Confidence 210 000100 0 0 00011233455554333 2 9999999999999987642
Q ss_pred -cccccccCCCC------------CeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCC
Q 047036 454 -QAKTAFPGLGS------------PITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRM 508 (634)
Q Consensus 454 -~akt~L~GH~d------------~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~ 508 (634)
.....+.+|.. +|++|+|+|||++|++ +.|++|+|||+. +++++..|.+|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~ 315 (368)
T 3mmy_A 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKD----ARTKLKTSEQLD 315 (368)
T ss_dssp HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETT----TTEEEEECCCCS
T ss_pred cccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECC----CCcEEEEecCCC
Confidence 23456677776 8999999999999999 899999999986 677777777665
No 109
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.87 E-value=1.4e-20 Score=198.84 Aligned_cols=221 Identities=8% Similarity=0.048 Sum_probs=153.0
Q ss_pred ceEEecCCCCCCCCCCcEEEEeCCC----------CcEEEEEeccCCCcceeEEEEecCCCCCCCCCCC-EEEEEeCCCe
Q 047036 318 NMMLMSPLKDGKPQAPGVQQLDIET----------GKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSE-STFLGLDDNR 386 (634)
Q Consensus 318 ~mllsss~d~~~~~~~TIrlWDleT----------GK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~-~laSGS~D~t 386 (634)
++|++++.+ ++|++||+.+ ++.+.++.+|...| ..++|+|+ +. .|++|+.|++
T Consensus 142 ~~lat~~~d------g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v--~~l~~~~~--------~~~~l~s~~~dg~ 205 (430)
T 2xyi_A 142 CVIATKTPS------SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEG--YGLSWNPN--------LNGYLLSASDDHT 205 (430)
T ss_dssp EEEEEECSS------SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCC--CCEEECTT--------STTEEEEECTTSC
T ss_pred cEEEEECCC------CcEEEEECCCcccccCccccCCCcEEecCCCCCe--EEEEeCCC--------CCCeEEEEeCCCe
Confidence 455666554 7899999987 78899999999976 45699998 34 9999999999
Q ss_pred EEEEEcCCCCc---e---EEecccCCCCccccccccccccCcceEEEEECC-CC-eEEEEECCCcEEEEeccccc--ccc
Q 047036 387 LCQWDMRDRSG---I---VQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DG-SIVVGSLDGKIRLYSKTSMR--QAK 456 (634)
Q Consensus 387 IklWD~R~~~~---~---Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG-~IASGS~DGtIRLWD~~t~r--~ak 456 (634)
|++||++.+.. . ...+.+| ...+.+++++| ++ .||+|+.||.|++||+.+.. ...
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~~h---------------~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFTGH---------------TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEECCC---------------SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCS
T ss_pred EEEEeCCCCCCCCceeccceeecCC---------------CCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcce
Confidence 99999987421 1 1222222 23478899998 45 78999999999999988642 245
Q ss_pred ccccCCCCCeEEEEECCCCCE-EEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCccc
Q 047036 457 TAFPGLGSPITHVDVTYDGKW-ILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKI 534 (634)
Q Consensus 457 t~L~GH~d~ItsVdfSpDGk~-LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~F 534 (634)
..+.+|..+|++|+|+|+|++ ||+ +.|++|+|||++. .++.+..|.+|.+.. ..+.|
T Consensus 271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~---~~~~~~~~~~h~~~v------------------~~i~~ 329 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN---LKLKLHSFESHKDEI------------------FQVQW 329 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC---TTSCSEEEECCSSCE------------------EEEEE
T ss_pred eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC---CCCCeEEeecCCCCE------------------EEEEE
Confidence 567799999999999999984 667 8899999999862 244455566554210 12444
Q ss_pred ccccccccccCCCCceEE-EEEcCCeEEEEeChhhhcccccccccccCCcceeeEEEeccCCCeeeecc
Q 047036 535 HGGHFSWVTENGKQERHL-VATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRF 602 (634)
Q Consensus 535 t~a~Fs~~t~~g~~E~~I-vtStg~~viiWdl~~v~~~~~~~y~~~~~~~~~~~Y~i~~~~~~i~~~~f 602 (634)
+|. + ...| +++.++.|.|||+......... - ..+.+.....+.+..+...|.++.|
T Consensus 330 sp~--------~--~~~l~s~~~d~~i~iwd~~~~~~~~~~-~-~~~~~~~~~~~~~~~h~~~v~~~~~ 386 (430)
T 2xyi_A 330 SPH--------N--ETILASSGTDRRLHVWDLSKIGEEQST-E-DAEDGPPELLFIHGGHTAKISDFSW 386 (430)
T ss_dssp CSS--------C--TTEEEEEETTSCCEEEEGGGTTCCCCH-H-HHHHCCTTEEEECCCCSSCEEEEEE
T ss_pred CCC--------C--CCEEEEEeCCCcEEEEeCCCCccccCc-c-ccccCCcceEEEcCCCCCCceEEEE
Confidence 443 2 2344 4467999999999863321100 0 0011111223566777888888777
No 110
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2.3e-20 Score=212.81 Aligned_cols=199 Identities=7% Similarity=0.035 Sum_probs=147.6
Q ss_pred CcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEEecCCCCCCC
Q 047036 256 VQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMMLMSPLKDGKP 330 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~ 330 (634)
+.+.++.+ +|+.+++.| ..|.||....... .....+.+|. ++.+..|+|+ .++++|++++.|
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~---~~~~~l~~h~~~V~~l~~s~~------~~~~~l~s~s~D---- 76 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH---KLIDTLTGHEGPVWRVDWAHP------KFGTILASCSYD---- 76 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE---EEEEEECCCSSCEEEEEECCT------TSCSEEEEEETT----
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC---ccceeccCCcCceEEEEecCC------CCCCEEEEEeCC----
Confidence 34777777 777777765 4788898653221 1233455552 2244444443 126778888775
Q ss_pred CCCcEEEEeCCCCc--EEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCc-eEEecccCCC
Q 047036 331 QAPGVQQLDIETGK--IVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSG-IVQNMVKGDS 407 (634)
Q Consensus 331 ~~~TIrlWDleTGK--~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~-~Vq~l~gh~s 407 (634)
++|++||+.+|+ .+..+.+|...| ..++|+|+.. +..+++|+.|++|++||++.+.. ....+.+|.
T Consensus 77 --g~I~vwd~~~~~~~~~~~~~~h~~~V--~~v~~sp~~~------~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~- 145 (753)
T 3jro_A 77 --GKVLIWKEENGRWSQIAVHAVHSASV--NSVQWAPHEY------GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA- 145 (753)
T ss_dssp --SCEEEEEEETTEEEEEEEECCCSSCE--EEEEECCGGG------CSEEEEEETTSEEEEEECCSSSCCCCEEEECCS-
T ss_pred --CeEEEEECCCCcccccccccCCCCCe--EEEEECCCCC------CCEEEEEeCCCcEEEEEeecCCCcceeEeecCC-
Confidence 799999999998 888999999976 5669999721 46899999999999999997632 123333333
Q ss_pred CccccccccccccCcceEEEEECC-------------CC-eEEEEECCCcEEEEeccccc---cccccccCCCCCeEEEE
Q 047036 408 PVLHWTQGHQFSRGTNFQCFASTG-------------DG-SIVVGSLDGKIRLYSKTSMR---QAKTAFPGLGSPITHVD 470 (634)
Q Consensus 408 ~V~~~~~g~~y~~~~~fssva~s~-------------dG-~IASGS~DGtIRLWD~~t~r---~akt~L~GH~d~ItsVd 470 (634)
..+.+++++| +| .||+|+.||+|++||+.+.. .....+.+|..+|++|+
T Consensus 146 --------------~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~ 211 (753)
T 3jro_A 146 --------------IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 211 (753)
T ss_dssp --------------SCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred --------------CceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEE
Confidence 3468888988 45 89999999999999987642 24457889999999999
Q ss_pred ECCC---CCEEEE-EcCCcEEEEEcc
Q 047036 471 VTYD---GKWILG-TTDTYLILICTL 492 (634)
Q Consensus 471 fSpD---Gk~LlS-S~D~tIrLWD~~ 492 (634)
|+|+ |++|++ +.|++|++||+.
T Consensus 212 ~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 212 WSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp ECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred eccCCCCCCEEEEEecCCEEEEecCC
Confidence 9999 999999 899999999986
No 111
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.86 E-value=7.1e-20 Score=182.42 Aligned_cols=247 Identities=11% Similarity=0.041 Sum_probs=163.9
Q ss_pred CcEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcc-eEEecCCCCCCC
Q 047036 256 VQSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETN-MMLMSPLKDGKP 330 (634)
Q Consensus 256 ~~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~-mllsss~d~~~~ 330 (634)
....++.+ +|+.+++.| ..|.||......... ....+.+|. .+...+.++++++ +|++++.|
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~--~~~~~~~~~-------~~v~~~~~~~~~~~~l~~~~~d---- 78 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV--DLLQSLRYK-------HPLLCCNFIDNTDLQIYVGTVQ---- 78 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE--EEEEEEECS-------SCEEEEEEEESSSEEEEEEETT----
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccc--cceeeeecC-------CceEEEEECCCCCcEEEEEcCC----
Confidence 34677777 677766654 578899875543100 112222331 2334444555667 67777765
Q ss_pred CCCcEEEEeC-CCCcEEEEEec--cCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCC---------CCce
Q 047036 331 QAPGVQQLDI-ETGKIVTEWKF--EKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRD---------RSGI 398 (634)
Q Consensus 331 ~~~TIrlWDl-eTGK~V~~lkg--H~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~---------~~~~ 398 (634)
++|++||+ .+++. ..+.+ |...| ..++|+| + ..+++|+.|++|++||++. +..
T Consensus 79 --g~i~~wd~~~~~~~-~~~~~~~~~~~v--~~l~~~~-~--------~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~- 143 (342)
T 1yfq_A 79 --GEILKVDLIGSPSF-QALTNNEANLGI--CRICKYG-D--------DKLIAASWDGLIEVIDPRNYGDGVIAVKNLN- 143 (342)
T ss_dssp --SCEEEECSSSSSSE-EECBSCCCCSCE--EEEEEET-T--------TEEEEEETTSEEEEECHHHHTTBCEEEEESC-
T ss_pred --CeEEEEEeccCCce-EeccccCCCCce--EEEEeCC-C--------CEEEEEcCCCeEEEEcccccccccccccCCe-
Confidence 68999999 88876 78899 99876 4569998 2 5899999999999999986 321
Q ss_pred EEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccc-ccc-ccccccCCCCCeEEEEECC-CC
Q 047036 399 VQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTS-MRQ-AKTAFPGLGSPITHVDVTY-DG 475 (634)
Q Consensus 399 Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t-~r~-akt~L~GH~d~ItsVdfSp-DG 475 (634)
+..+ .....+.++++++++ |++|+.||.|++||+.+ +.. .......|..+|++|+|+| +|
T Consensus 144 ~~~~----------------~~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 206 (342)
T 1yfq_A 144 SNNT----------------KVKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQ 206 (342)
T ss_dssp SSSS----------------SSCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGG
T ss_pred eeEE----------------eeCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCC
Confidence 1222 123457899999988 99999999999999876 432 2234557899999999999 99
Q ss_pred CEEEE-EcCCcEEEEEcccc--cCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEE
Q 047036 476 KWILG-TTDTYLILICTLFS--DKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHL 552 (634)
Q Consensus 476 k~LlS-S~D~tIrLWD~~~~--~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~I 552 (634)
++|++ +.|+.|+||+.... ...++.+..|.+|...... ..|. ...+...|++. + ...+
T Consensus 207 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~------~~i~~~~~s~~---~--~~l~ 267 (342)
T 1yfq_A 207 EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKD--------TNLA------YPVNSIEFSPR---H--KFLY 267 (342)
T ss_dssp CEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTC--------CSSC------CCEEEEEECTT---T--CCEE
T ss_pred CEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccc--------cccc------eeEEEEEEcCC---C--CEEE
Confidence 99999 89999999998631 0013555666666431100 0000 11122234321 2 2344
Q ss_pred EEEcCCeEEEEeCh
Q 047036 553 VATVGKFSVIWDFQ 566 (634)
Q Consensus 553 vtStg~~viiWdl~ 566 (634)
+++.++.|.+||+.
T Consensus 268 ~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 268 TAGSDGIISCWNLQ 281 (342)
T ss_dssp EEETTSCEEEEETT
T ss_pred EecCCceEEEEcCc
Confidence 55779999999987
No 112
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.86 E-value=1.7e-19 Score=189.19 Aligned_cols=232 Identities=12% Similarity=0.093 Sum_probs=167.6
Q ss_pred cEEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQA 332 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~ 332 (634)
.+.+|++ +|+.+++.| ..|.||...... ....+.+|.. +...+ ..++.+|++++.|
T Consensus 149 ~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~-----~~~~~~~h~~-------~v~~~--s~~~~~l~sgs~d------ 208 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK-----RLRNMTSHSA-------RVGSL--SWNSYILSSGSRS------ 208 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTE-----EEEEECCCSS-------CEEEE--EEETTEEEEEETT------
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEcCCCc-----EEEEEeCCCC-------ceEEE--eeCCCEEEEEeCC------
Confidence 4778888 888888876 478889865542 2334555521 11222 2345667777765
Q ss_pred CcEEEEeCCC-CcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCce---EEecccCCCC
Q 047036 333 PGVQQLDIET-GKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGI---VQNMVKGDSP 408 (634)
Q Consensus 333 ~TIrlWDleT-GK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~---Vq~l~gh~s~ 408 (634)
+++++||+.+ ...+.++.+|...| +.+.++|+ +.++++|+.|+.|++||.+.+... +.....|
T Consensus 209 ~~i~~~d~~~~~~~~~~~~~h~~~~--~~~~~~~~--------g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~--- 275 (420)
T 4gga_A 209 GHIHHHDVRVAEHHVATLSGHSQEV--CGLRWAPD--------GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH--- 275 (420)
T ss_dssp SEEEEEETTSSSCEEEEEECCSSCE--EEEEECTT--------SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCC---
T ss_pred CceeEeeecccceeeEEecccccce--eeeeecCC--------CCeeeeeeccccceEEeeccccccceeeeeeccc---
Confidence 7999999886 46778999999976 56799998 689999999999999999876431 2222222
Q ss_pred ccccccccccccCcceEEEEECCCC--eEEE--EECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-E--
Q 047036 409 VLHWTQGHQFSRGTNFQCFASTGDG--SIVV--GSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-T-- 481 (634)
Q Consensus 409 V~~~~~g~~y~~~~~fssva~s~dG--~IAS--GS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S-- 481 (634)
...+.+++++|.+ .||+ ||.|++|||||+.+++ ....+.. ...|.++.|+|+++.|++ +
T Consensus 276 ------------~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~-~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~ 341 (420)
T 4gga_A 276 ------------QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-CLSAVDA-HSQVCSILWSPHYKELISGHGF 341 (420)
T ss_dssp ------------SSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE-EEEEEEC-SSCEEEEEEETTTTEEEEEECT
T ss_pred ------------CCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc-cceeecc-ccceeeeeecCCCCeEEEEEec
Confidence 2346788898865 4555 5689999999998874 5566664 457999999999999997 4
Q ss_pred cCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEE
Q 047036 482 TDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSV 561 (634)
Q Consensus 482 ~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~vi 561 (634)
.|++|+|||+. +++++..|.||.+.. ..+.|+|+ | ...+.+|.|+.|+
T Consensus 342 ~d~~I~iwd~~----~~~~v~~l~gH~~~V------------------~~l~~spd--------g--~~l~S~s~D~tvr 389 (420)
T 4gga_A 342 AQNQLVIWKYP----TMAKVAELKGHTSRV------------------LSLTMSPD--------G--ATVASAAADETLR 389 (420)
T ss_dssp TTCCEEEEETT----TCCEEEEECCCSSCE------------------EEEEECTT--------S--SCEEEEETTTEEE
T ss_pred CCCEEEEEECC----CCcEEEEEcCCCCCE------------------EEEEEcCC--------C--CEEEEEecCCeEE
Confidence 58999999985 788999999987521 12455554 3 2344447899999
Q ss_pred EEeChh
Q 047036 562 IWDFQQ 567 (634)
Q Consensus 562 iWdl~~ 567 (634)
+||+..
T Consensus 390 iWdv~~ 395 (420)
T 4gga_A 390 LWRCFE 395 (420)
T ss_dssp EECCSC
T ss_pred EEECCC
Confidence 999864
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.86 E-value=1.4e-19 Score=177.92 Aligned_cols=132 Identities=12% Similarity=0.194 Sum_probs=110.0
Q ss_pred CcEEEEeCCCCcEEEEEec--cCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcc
Q 047036 333 PGVQQLDIETGKIVTEWKF--EKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVL 410 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkg--H~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~ 410 (634)
++|++||+++|++++.+++ |...| ..++|+|+ ++.+++|+.|++|++||+++++ .++.+.+|...
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V--~~v~~~~~--------~~~l~sgs~Dg~v~iw~~~~~~-~~~~~~~h~~~-- 111 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYI--SSVAWIKE--------GNYLAVGTSSAEVQLWDVQQQK-RLRNMTSHSAR-- 111 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCE--EEEEECTT--------SSEEEEEETTSEEEEEETTTTE-EEEEEECCSSC--
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeE--EEEEECCC--------CCEEEEEECCCcEEEeecCCce-eEEEecCccce--
Confidence 6999999999999998875 55544 56799998 6899999999999999999865 46777666543
Q ss_pred ccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEE
Q 047036 411 HWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLIL 488 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrL 488 (634)
+.++ +.++ .|++|+.++.+++|+..........+.+|...+..+.++++|++|++ +.|++|+|
T Consensus 112 -------------~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i 176 (318)
T 4ggc_A 112 -------------VGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNV 176 (318)
T ss_dssp -------------EEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -------------EEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeE
Confidence 2333 3344 79999999999999987654455678899999999999999999999 89999999
Q ss_pred EEcc
Q 047036 489 ICTL 492 (634)
Q Consensus 489 WD~~ 492 (634)
||+.
T Consensus 177 wd~~ 180 (318)
T 4ggc_A 177 WPSA 180 (318)
T ss_dssp EESS
T ss_pred EECC
Confidence 9986
No 114
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.86 E-value=4.4e-20 Score=193.99 Aligned_cols=180 Identities=14% Similarity=0.224 Sum_probs=141.4
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCC
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDR 395 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~ 395 (634)
++++|++++.| ++|++||+.+|+++.++.+|...| ..++|++ ..+++|+.|++|++||++++
T Consensus 128 ~g~~l~sg~~d------g~i~vwd~~~~~~~~~~~~h~~~v--~~~~~~~----------~~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 128 CGNRIVSGSDD------NTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRD----------NIIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp ETTEEEEEETT------SCEEEEETTTCCEEEECCCCSSCE--EEEEEET----------TEEEEEETTSCEEEEETTTT
T ss_pred cCCEEEEEECC------CcEEEEECCCCcEEEEEcCCCCCE--EEEEecC----------CEEEEEeCCCeEEEEECCcC
Confidence 35677777765 799999999999999999999976 4457763 58999999999999999986
Q ss_pred CceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCC
Q 047036 396 SGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDG 475 (634)
Q Consensus 396 ~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDG 475 (634)
. .+..+.+|..+ +.+++++ +..||+|+.||+|++||+.+++ ....+.+|..+|++++| +|
T Consensus 190 ~-~~~~~~~h~~~---------------v~~~~~~-~~~l~s~s~dg~i~~wd~~~~~-~~~~~~~~~~~v~~~~~--~~ 249 (445)
T 2ovr_B 190 E-CIHTLYGHTST---------------VRCMHLH-EKRVVSGSRDATLRVWDIETGQ-CLHVLMGHVAAVRCVQY--DG 249 (445)
T ss_dssp E-EEEEECCCSSC---------------EEEEEEE-TTEEEEEETTSEEEEEESSSCC-EEEEEECCSSCEEEEEE--CS
T ss_pred c-EEEEECCCCCc---------------EEEEEec-CCEEEEEeCCCEEEEEECCCCc-EEEEEcCCcccEEEEEE--CC
Confidence 4 45777666543 4677774 3489999999999999998864 67788999999999999 88
Q ss_pred CEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEE
Q 047036 476 KWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVA 554 (634)
Q Consensus 476 k~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~Ivt 554 (634)
++|++ +.|++|++||+. .++.+..+.+|.+.. ..+.| + + ...+++
T Consensus 250 ~~l~~~~~dg~i~iwd~~----~~~~~~~~~~~~~~v------------------~~~~~-----~-----~--~~l~~~ 295 (445)
T 2ovr_B 250 RRVVSGAYDFMVKVWDPE----TETCLHTLQGHTNRV------------------YSLQF-----D-----G--IHVVSG 295 (445)
T ss_dssp SCEEEEETTSCEEEEEGG----GTEEEEEECCCSSCE------------------EEEEE-----C-----S--SEEEEE
T ss_pred CEEEEEcCCCEEEEEECC----CCcEeEEecCCCCce------------------EEEEE-----C-----C--CEEEEE
Confidence 99998 899999999986 577777777665310 11222 2 2 245556
Q ss_pred EcCCeEEEEeChh
Q 047036 555 TVGKFSVIWDFQQ 567 (634)
Q Consensus 555 Stg~~viiWdl~~ 567 (634)
+.|+.|.+||+..
T Consensus 296 ~~d~~i~i~d~~~ 308 (445)
T 2ovr_B 296 SLDTSIRVWDVET 308 (445)
T ss_dssp ETTSCEEEEETTT
T ss_pred eCCCeEEEEECCC
Confidence 7899999999873
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3e-20 Score=196.65 Aligned_cols=197 Identities=13% Similarity=0.125 Sum_probs=145.2
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCc---EEEEEeccCC----------------------------
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGK---IVTEWKFEKD---------------------------- 354 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK---~V~~lkgH~~---------------------------- 354 (634)
.|...+.++.++++|+++.. ++|++||+++|+ ++..|..|..
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~-------~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIK-------NCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLK 77 (450)
T ss_dssp CCCCEEEECSSSSEEEEEET-------TEEEEEEEETTTEEEEEEEEECCC-----------------------------
T ss_pred ccEEEEEecCCCCEEEEEeC-------CeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccc
Confidence 35555556666776666643 589999999999 8999986543
Q ss_pred --------------------------CcceeEEEEecCCCCCCCCCCCEE-EEEeCCCeEEEEEcC--CCCceEEecccC
Q 047036 355 --------------------------GTDITMRDITNDTKSSQLDPSEST-FLGLDDNRLCQWDMR--DRSGIVQNMVKG 405 (634)
Q Consensus 355 --------------------------~V~I~vvsfsPd~K~~q~~~g~~l-aSGS~D~tIklWD~R--~~~~~Vq~l~gh 405 (634)
.| ..++|+|+ +..| ++|+.|++|++||++ .+. .++.+..|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~s~d--------~~~l~~~~~~dg~v~iwd~~~~~~~-~~~~~~~~ 146 (450)
T 2vdu_B 78 SNKGDSIKRTAAKVPSPGLGAPPIYSYI--RNLRLTSD--------ESRLIACADSDKSLLVFDVDKTSKN-VLKLRKRF 146 (450)
T ss_dssp ----------------------CCCCCE--EEEEECTT--------SSEEEEEEGGGTEEEEEEECSSSSS-CEEEEEEE
T ss_pred cCcCccccccCccccCCCCCCCccCCce--EEEEEcCC--------CCEEEEEECCCCeEEEEECcCCCCc-eeeeeecc
Confidence 34 56799998 5664 999999999999998 554 34555422
Q ss_pred CCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccccc----ccccCCCCCeEEEEECCC---CCE
Q 047036 406 DSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAK----TAFPGLGSPITHVDVTYD---GKW 477 (634)
Q Consensus 406 ~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~ak----t~L~GH~d~ItsVdfSpD---Gk~ 477 (634)
. ....+++++++|+| +||+|+.||.|++|++.+++ .. ..+.+|..+|++|+|+|| |++
T Consensus 147 ~-------------~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~ 212 (450)
T 2vdu_B 147 C-------------FSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIP-EEKFTQEPILGHVSMLTDVHLIKDSDGHQF 212 (450)
T ss_dssp E-------------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCC-CSSCCCCCSEECSSCEEEEEEEECTTSCEE
T ss_pred c-------------CCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcc-cccccceeeecccCceEEEEEcCCCCCCcE
Confidence 1 12347899999999 89999999999999987753 33 378899999999999999 999
Q ss_pred EEE-EcCCcEEEEEcccccCCCCeeee-ecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEE
Q 047036 478 ILG-TTDTYLILICTLFSDKDGKTKTG-FSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVAT 555 (634)
Q Consensus 478 LlS-S~D~tIrLWD~~~~~~~G~~~~g-F~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtS 555 (634)
|++ +.|++|+|||+. .++++.. +.+|.+.. ..+.|+ . | ...++++
T Consensus 213 l~s~~~d~~i~vwd~~----~~~~~~~~~~~h~~~v------------------~~~~~s-d--------~--~~l~s~~ 259 (450)
T 2vdu_B 213 IITSDRDEHIKISHYP----QCFIVDKWLFGHKHFV------------------SSICCG-K--------D--YLLLSAG 259 (450)
T ss_dssp EEEEETTSCEEEEEES----CTTCEEEECCCCSSCE------------------EEEEEC-S--------T--TEEEEEE
T ss_pred EEEEcCCCcEEEEECC----CCceeeeeecCCCCce------------------EEEEEC-C--------C--CEEEEEe
Confidence 999 899999999975 5665555 33454210 123343 2 2 2344557
Q ss_pred cCCeEEEEeChh
Q 047036 556 VGKFSVIWDFQQ 567 (634)
Q Consensus 556 tg~~viiWdl~~ 567 (634)
.|+.|.+||+..
T Consensus 260 ~d~~v~vwd~~~ 271 (450)
T 2vdu_B 260 GDDKIFAWDWKT 271 (450)
T ss_dssp SSSEEEEEETTT
T ss_pred CCCeEEEEECCC
Confidence 899999999873
No 116
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.85 E-value=2.3e-19 Score=182.79 Aligned_cols=190 Identities=12% Similarity=0.061 Sum_probs=132.6
Q ss_pred EEeeeCCCeEEEec--CeeeEEEccCCceecceeEEEec-CC-CCCcccccCcceeeEEeCCcceEEecCCCCCCCCCCc
Q 047036 259 LTLGALDNSFLVSD--LGLQVYRNYNRGIHNKGVSVRFD-GG-SSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPG 334 (634)
Q Consensus 259 LavG~~D~sfvv~G--~~igV~k~~~~gl~~~~~~~~~~-~~-~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~T 334 (634)
|++|+.|+++.++. ..+.+|...... ....+. +| .++.+.+|+|. .+++++++++.| ++
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~------~~~~~l~s~s~d------g~ 150 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNK-----VLREIEVDSANEIIYMYGHNE------VNTEYFIWADNR------GT 150 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCC-----EEEEEECCCSSCEEEEECCC---------CCEEEEEETT------CC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcc-----eeEEeecCCCCCEEEEEcCCC------CCCCEEEEEeCC------Cc
Confidence 77777888888874 456666654432 111111 22 11233444440 055677777765 79
Q ss_pred EEEEeCCCCcEEEEEeccCC-CcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEeccc-CCCCcccc
Q 047036 335 VQQLDIETGKIVTEWKFEKD-GTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVK-GDSPVLHW 412 (634)
Q Consensus 335 IrlWDleTGK~V~~lkgH~~-~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~g-h~s~V~~~ 412 (634)
|++||+++|+++..+.+|.. .| ..++|+|+ +.++++|+.|++|++||++++..+...+.+ |..
T Consensus 151 i~~wd~~~~~~~~~~~~~~~~~i--~~~~~~pd--------g~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~----- 215 (343)
T 3lrv_A 151 IGFQSYEDDSQYIVHSAKSDVEY--SSGVLHKD--------SLLLALYSPDGILDVYNLSSPDQASSRFPVDEEA----- 215 (343)
T ss_dssp EEEEESSSSCEEEEECCCSSCCC--CEEEECTT--------SCEEEEECTTSCEEEEESSCTTSCCEECCCCTTS-----
T ss_pred EEEEECCCCcEEEEEecCCCCce--EEEEECCC--------CCEEEEEcCCCEEEEEECCCCCCCccEEeccCCC-----
Confidence 99999999999888866544 44 56799998 689999999999999999987654255654 443
Q ss_pred ccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccccccccc---CCCCCeE--EEEECCCCCEEEE-Ec-CC
Q 047036 413 TQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFP---GLGSPIT--HVDVTYDGKWILG-TT-DT 484 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~---GH~d~It--sVdfSpDGk~LlS-S~-D~ 484 (634)
.+++++|+|+| +||+|+ |++|||||+++.+ ....+. +|..++. +|+|+|+|++|++ +. |+
T Consensus 216 ----------~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~ 283 (343)
T 3lrv_A 216 ----------KIKEVKFADNGYWMVVEC-DQTVVCFDLRKDV-GTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN 283 (343)
T ss_dssp ----------CEEEEEECTTSSEEEEEE-SSBEEEEETTSST-TCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT
T ss_pred ----------CEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCC-cceeecccccccccccceEEEECCCCCEEEEecCCCC
Confidence 46899999999 799999 5599999998753 433343 3555665 5999999999999 77 99
Q ss_pred cEEEEEcc
Q 047036 485 YLILICTL 492 (634)
Q Consensus 485 tIrLWD~~ 492 (634)
.|+||+..
T Consensus 284 ~i~v~~~~ 291 (343)
T 3lrv_A 284 SLTIYKFD 291 (343)
T ss_dssp EEEEEEEC
T ss_pred cEEEEEEc
Confidence 99999974
No 117
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.85 E-value=1.9e-19 Score=179.35 Aligned_cols=219 Identities=13% Similarity=0.153 Sum_probs=140.6
Q ss_pred cceEEecCCCCCCCCCCcEEEEeCCC-CcEE-EEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCC
Q 047036 317 TNMMLMSPLKDGKPQAPGVQQLDIET-GKIV-TEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRD 394 (634)
Q Consensus 317 ~~mllsss~d~~~~~~~TIrlWDleT-GK~V-~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~ 394 (634)
+++|++++.| ++|++||+.+ ++.+ ..+.+|...| ..++|+|+ ++.|++|+.|++|++||+++
T Consensus 54 g~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h~~~v--~~~~~~~~--------~~~l~s~~~dg~v~iwd~~~ 117 (368)
T 3mmy_A 54 GNFLIAGSWA------NDVRCWEVQDSGQTIPKAQQMHTGPV--LDVCWSDD--------GSKVFTASCDKTAKMWDLSS 117 (368)
T ss_dssp SEEEEEEETT------SEEEEEEECTTSCEEEEEEEECSSCE--EEEEECTT--------SSEEEEEETTSEEEEEETTT
T ss_pred ceEEEEECCC------CcEEEEEcCCCCceeEEEeccccCCE--EEEEECcC--------CCEEEEEcCCCcEEEEEcCC
Confidence 3667777765 7999999998 7666 8899999986 46699998 67999999999999999997
Q ss_pred CCceEEecccCCCCccccccccccccCcceEEEEE--CCCC-eEEEEECCCcEEEEeccccccccccccCCC--------
Q 047036 395 RSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFAS--TGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLG-------- 463 (634)
Q Consensus 395 ~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~--s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~-------- 463 (634)
+.. +. +.+|.. .+.++++ ++++ +|++|+.||+|+|||+.+++ ....+..|.
T Consensus 118 ~~~-~~-~~~~~~---------------~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~ 179 (368)
T 3mmy_A 118 NQA-IQ-IAQHDA---------------PVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN-PMMVLQLPERCYCADVI 179 (368)
T ss_dssp TEE-EE-EEECSS---------------CEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS-CSEEEECSSCEEEEEEE
T ss_pred CCc-ee-eccccC---------------ceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc-EEEEEecCCCceEEEec
Confidence 643 33 333433 4678888 8888 69999999999999988753 455555443
Q ss_pred ---------------------------------CCeEEEEECCCCCE----EEE-EcCCcEEEEEcccccCCCCeeeeec
Q 047036 464 ---------------------------------SPITHVDVTYDGKW----ILG-TTDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 464 ---------------------------------d~ItsVdfSpDGk~----LlS-S~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
..+..+++.+++.+ |++ +.|+.|+|||+.... ....+..|.
T Consensus 180 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~-~~~~~~~~~ 258 (368)
T 3mmy_A 180 YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPN-PAKDNFTFK 258 (368)
T ss_dssp TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSC-HHHHSEEEE
T ss_pred CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCC-ccccceeee
Confidence 33444555444443 555 667777777754210 003334455
Q ss_pred CCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChhhhcccccccccccCCcce
Q 047036 506 GRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSC 585 (634)
Q Consensus 506 gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~v~~~~~~~y~~~~~~~~~ 585 (634)
+|.....+ ...+.| ....+...|++. + ...++++.|+.|.+||+.. ++.
T Consensus 259 ~~~~~~~~-----~~~~~~------~~~v~~~~~sp~---~--~~l~s~~~dg~i~iwd~~~---~~~------------ 307 (368)
T 3mmy_A 259 CHRSNGTN-----TSAPQD------IYAVNGIAFHPV---H--GTLATVGSDGRFSFWDKDA---RTK------------ 307 (368)
T ss_dssp CSEEC---------CCCEE------ECCEEEEEECTT---T--CCEEEEETTSCEEEEETTT---TEE------------
T ss_pred eeeccccc-----cccccc------ccceEEEEEecC---C--CEEEEEccCCeEEEEECCC---CcE------------
Confidence 44421100 000000 012233345431 2 2455557899999999873 222
Q ss_pred eeEEEeccCCCeeeecc
Q 047036 586 YCYKIVLKDESIVESRF 602 (634)
Q Consensus 586 ~~Y~i~~~~~~i~~~~f 602 (634)
...+..+...|.++.|
T Consensus 308 -~~~~~~~~~~v~~~~~ 323 (368)
T 3mmy_A 308 -LKTSEQLDQPISACCF 323 (368)
T ss_dssp -EEECCCCSSCEEEEEE
T ss_pred -EEEecCCCCCceEEEE
Confidence 1466778888888887
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.84 E-value=6.6e-20 Score=205.73 Aligned_cols=151 Identities=13% Similarity=0.080 Sum_probs=117.5
Q ss_pred ceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCC-----CcceeEEEEecCCCCCCCCCCCEEEEEe
Q 047036 308 KKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKD-----GTDITMRDITNDTKSSQLDPSESTFLGL 382 (634)
Q Consensus 308 ~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~-----~V~I~vvsfsPd~K~~q~~~g~~laSGS 382 (634)
...+-+++++.+|++++.| ++|++||.++ ++..+. |.. .| ..++|||| |+.||+|+
T Consensus 88 V~~vawSPdG~~LAs~s~d------g~V~iwd~~~--~l~~l~-~~~~~~~~sv--~svafSPD--------G~~LAsgs 148 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNN------GNVSVFKDNK--MLTNLD-SKGNLSSRTY--HCFEWNPI--------ESSIVVGN 148 (588)
T ss_dssp EEEEEECSSSSCEEEEETT------SCEEEEETTE--EEEECC-CSSCSTTTCE--EEEEECSS--------SSCEEEEE
T ss_pred EEEEEECCCCCEEEEEeCC------CcEEEEeCCc--eeeecc-CCCccccccE--EEEEEcCC--------CCEEEEEc
Confidence 4455556667777777765 7999999764 888888 775 35 45699999 67999999
Q ss_pred CCCeEEEEEcCCCCc------eEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEecccccccc
Q 047036 383 DDNRLCQWDMRDRSG------IVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAK 456 (634)
Q Consensus 383 ~D~tIklWD~R~~~~------~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~ak 456 (634)
.|++|++||++.+.. .++++..|.. || ...+.+++++|+| ||++|.|++|||||+.+.. .+
T Consensus 149 ~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~-------gh----~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~-~~ 215 (588)
T 2j04_A 149 EDGELQFFSIRKNSENTPEFYFESSIRLSDA-------GS----KDWVTHIVWYEDV-LVAALSNNSVFSMTVSASS-HQ 215 (588)
T ss_dssp TTSEEEEEECCCCTTTCCCCEEEEEEECSCT-------TC----CCCEEEEEEETTE-EEEEETTCCEEEECCCSSS-SC
T ss_pred CCCEEEEEECCCCccccccceeeeeeecccc-------cc----cccEEEEEEcCCc-EEEEeCCCeEEEEECCCCc-cc
Confidence 999999999997642 3566632221 11 1246899999999 9999999999999998743 32
Q ss_pred ---ccc-cCCCCCeEEEEECCCCCEEEEEcCCcEEEEEcc
Q 047036 457 ---TAF-PGLGSPITHVDVTYDGKWILGTTDTYLILICTL 492 (634)
Q Consensus 457 ---t~L-~GH~d~ItsVdfSpDGk~LlSS~D~tIrLWD~~ 492 (634)
.+| ++|...|.+|+|+ |++||++++++|+|||+.
T Consensus 216 ~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~ 253 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLK 253 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETT
T ss_pred cceeeecccccCcEEEEEEE--CCEEEEEeCCeEEEEECC
Confidence 346 5899999999999 799999889999999974
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.84 E-value=4.3e-20 Score=210.54 Aligned_cols=197 Identities=9% Similarity=0.065 Sum_probs=143.7
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCC--CCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcC
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIE--TGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMR 393 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDle--TGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R 393 (634)
++++|++++.| ++|++||+. +++++.++.+|...| ..++|+|+.. +..+++|+.|++|++||++
T Consensus 20 dg~~latg~~d------g~I~vwd~~~~~~~~~~~l~~h~~~V--~~l~~s~~~~------~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 20 YGKRLATCSSD------KTIKIFEVEGETHKLIDTLTGHEGPV--WRVDWAHPKF------GTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp SSCCEEEEETT------TEEEEEEEETTEEEEEEEECCCSSCE--EEEEECCTTS------CSEEEEEETTSCEEEEEEE
T ss_pred CCCeEEEEECC------CcEEEEecCCCCCccceeccCCcCce--EEEEecCCCC------CCEEEEEeCCCeEEEEECC
Confidence 34567777665 799999998 678999999999976 4569988622 4799999999999999999
Q ss_pred CCCc-eEEecccCCCCccccccccccccCcceEEEEECCC--C-eEEEEECCCcEEEEeccccc-cccccccCCCCCeEE
Q 047036 394 DRSG-IVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD--G-SIVVGSLDGKIRLYSKTSMR-QAKTAFPGLGSPITH 468 (634)
Q Consensus 394 ~~~~-~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d--G-~IASGS~DGtIRLWD~~t~r-~akt~L~GH~d~Its 468 (634)
++.. .+..+.+|.. .+++++++|+ | .|++|+.||+|++||+.+.. .....+.+|..+|++
T Consensus 86 ~~~~~~~~~~~~h~~---------------~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~ 150 (753)
T 3jro_A 86 NGRWSQIAVHAVHSA---------------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNS 150 (753)
T ss_dssp TTEEEEEEEECCCSS---------------CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEE
T ss_pred CCcccccccccCCCC---------------CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEE
Confidence 7641 3445544433 4689999998 7 79999999999999987642 133467799999999
Q ss_pred EEECC-------------CCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCccc
Q 047036 469 VDVTY-------------DGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKI 534 (634)
Q Consensus 469 VdfSp-------------DGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~F 534 (634)
|+|+| ||++|++ +.|++|++||++........+..+.+|.+.. ..+.|
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V------------------~~l~~ 212 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV------------------RDVAW 212 (753)
T ss_dssp EEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE------------------EEEEE
T ss_pred EEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcE------------------EEEEe
Confidence 99999 6999999 8999999999863211223444455554210 12444
Q ss_pred ccccccccccCCCCceEEE-EEcCCeEEEEeChh
Q 047036 535 HGGHFSWVTENGKQERHLV-ATVGKFSVIWDFQQ 567 (634)
Q Consensus 535 t~a~Fs~~t~~g~~E~~Iv-tStg~~viiWdl~~ 567 (634)
+|.... ...|+ ++.|+.|.+||+..
T Consensus 213 sp~~~~--------~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 213 SPTVLL--------RSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp CCCCSS--------SEEEEEEESSSCEEEEEESS
T ss_pred ccCCCC--------CCEEEEEecCCEEEEecCCC
Confidence 444110 13454 47799999999874
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.84 E-value=4.6e-20 Score=207.02 Aligned_cols=168 Identities=13% Similarity=0.118 Sum_probs=114.6
Q ss_pred CcccccCcceeeEEeCCcceEEecCCCCC--C-----------CCCCcEEEEeCCCCcEEEEEe-ccCCCcceeEEEEec
Q 047036 300 KIGSNSTPKKALLMRGETNMMLMSPLKDG--K-----------PQAPGVQQLDIETGKIVTEWK-FEKDGTDITMRDITN 365 (634)
Q Consensus 300 ~~g~~fsP~~~mL~~~D~~mllsss~d~~--~-----------~~~~TIrlWDleTGK~V~~lk-gH~~~V~I~vvsfsP 365 (634)
+.+++|+|++.+++.+....-+..+.-.. + ..+++++.|++.+|+....+. +|.+.| ..++|||
T Consensus 18 v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V--~~vawSP 95 (588)
T 2j04_A 18 KNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYP--RVCKPSP 95 (588)
T ss_dssp SCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCE--EEEEECS
T ss_pred EEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcE--EEEEECC
Confidence 36777888887666543332221000000 0 001345556666665444444 566654 5679999
Q ss_pred CCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcE
Q 047036 366 DTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKI 444 (634)
Q Consensus 366 d~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtI 444 (634)
+ |.+||+++.|++|++||... ++..+. |..++ ....+.+++|+|+| +||+|+.||+|
T Consensus 96 d--------G~~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~----------~~~sv~svafSPDG~~LAsgs~DGtV 153 (588)
T 2j04_A 96 I--------DDWMAVLSNNGNVSVFKDNK---MLTNLD-SKGNL----------SSRTYHCFEWNPIESSIVVGNEDGEL 153 (588)
T ss_dssp S--------SSCEEEEETTSCEEEEETTE---EEEECC-CSSCS----------TTTCEEEEEECSSSSCEEEEETTSEE
T ss_pred C--------CCEEEEEeCCCcEEEEeCCc---eeeecc-CCCcc----------ccccEEEEEEcCCCCEEEEEcCCCEE
Confidence 8 67899999999999999532 455565 54432 12347899999999 79999999999
Q ss_pred EEEecccccc------ccccc----cCCCCCeEEEEECCCCCEEEEEcCCcEEEEEcc
Q 047036 445 RLYSKTSMRQ------AKTAF----PGLGSPITHVDVTYDGKWILGTTDTYLILICTL 492 (634)
Q Consensus 445 RLWD~~t~r~------akt~L----~GH~d~ItsVdfSpDGk~LlSS~D~tIrLWD~~ 492 (634)
||||+.+++. ...++ .||.++|.+|+||||| .++++.|++|+|||+.
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~ 210 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVS 210 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCC
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECC
Confidence 9999887521 12444 7899999999999999 4444999999999974
No 121
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.83 E-value=9.5e-19 Score=174.29 Aligned_cols=142 Identities=10% Similarity=0.148 Sum_probs=114.3
Q ss_pred eCCcceEEecCCCCCCCCCCcEEEEeCCCCc---EEEEEeccCCCcceeEEEEecCCCCCCCCCCC-EEEEEeCCCeEEE
Q 047036 314 RGETNMMLMSPLKDGKPQAPGVQQLDIETGK---IVTEWKFEKDGTDITMRDITNDTKSSQLDPSE-STFLGLDDNRLCQ 389 (634)
Q Consensus 314 ~~D~~mllsss~d~~~~~~~TIrlWDleTGK---~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~-~laSGS~D~tIkl 389 (634)
+.++++|++++.| ++|++||+.+++ .+..+.+|...| ..++|+|+ +. .+++|+.|++|++
T Consensus 20 s~~~~~l~~~~~d------~~v~iw~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~--------~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 20 IPSKSLLLITSWD------GSLTVYKFDIQAKNVDLLQSLRYKHPL--LCCNFIDN--------TDLQIYVGTVQGEILK 83 (342)
T ss_dssp EGGGTEEEEEETT------SEEEEEEEETTTTEEEEEEEEECSSCE--EEEEEEES--------SSEEEEEEETTSCEEE
T ss_pred cCCCCEEEEEcCC------CeEEEEEeCCCCccccceeeeecCCce--EEEEECCC--------CCcEEEEEcCCCeEEE
Confidence 3445667777665 799999999988 456677999876 46699998 68 8999999999999
Q ss_pred EEc-CCCCceEEeccc--CCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccc---------cccccc
Q 047036 390 WDM-RDRSGIVQNMVK--GDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTS---------MRQAKT 457 (634)
Q Consensus 390 WD~-R~~~~~Vq~l~g--h~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t---------~r~akt 457 (634)
||+ ..+. +..+.+ |.. .+.+++++++.+|++|+.||.|++||+.+ .+ ...
T Consensus 84 wd~~~~~~--~~~~~~~~~~~---------------~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~ 145 (342)
T 1yfq_A 84 VDLIGSPS--FQALTNNEANL---------------GICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNL-NSN 145 (342)
T ss_dssp ECSSSSSS--EEECBSCCCCS---------------CEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEES-CSS
T ss_pred EEeccCCc--eEeccccCCCC---------------ceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCC-eee
Confidence 999 7653 355654 443 46788998844899999999999999886 53 556
Q ss_pred cccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcc
Q 047036 458 AFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTL 492 (634)
Q Consensus 458 ~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~ 492 (634)
.+. |...|++|+|+|++ |++ +.|+.|++||+.
T Consensus 146 ~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~ 178 (342)
T 1yfq_A 146 NTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLP 178 (342)
T ss_dssp SSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESS
T ss_pred EEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECC
Confidence 676 99999999999998 666 899999999975
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.82 E-value=5.9e-19 Score=182.31 Aligned_cols=198 Identities=14% Similarity=0.157 Sum_probs=131.9
Q ss_pred eCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEE-EEEeCCCeEEEEEc
Q 047036 314 RGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSEST-FLGLDDNRLCQWDM 392 (634)
Q Consensus 314 ~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~l-aSGS~D~tIklWD~ 392 (634)
++|+++|++++. ..+++||+++++.+.....+ .+ .++++.++ ++.+ ++|+.|++|++||+
T Consensus 28 s~dg~~la~g~~-------~~~~iw~~~~~~~~~~~~~~--~~--~~~~~~~~--------~~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 28 NQDQSCLILSTL-------KSFEIYNVHPVAHIMSQEMR--HL--SKVRMLHR--------TNYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp CTTSSEEEEECS-------SEEEEEEETTEEEEEEEECS--CC--CEEEECTT--------SSEEEEECSSTTEEEEEET
T ss_pred CCCCCEEEEEcC-------CEEEEEecCCcceeeeeecC--Ce--EEEEEcCC--------CCEEEEEECCccEEEEEEC
Confidence 344455666654 35899999999887765544 23 46688887 3444 67888999999999
Q ss_pred CCCCceEEecccCCCCccc------------------cc--cc----cccccCcceEEEEECCCCeEEE--EECCCcEEE
Q 047036 393 RDRSGIVQNMVKGDSPVLH------------------WT--QG----HQFSRGTNFQCFASTGDGSIVV--GSLDGKIRL 446 (634)
Q Consensus 393 R~~~~~Vq~l~gh~s~V~~------------------~~--~g----~~y~~~~~fssva~s~dG~IAS--GS~DGtIRL 446 (634)
+++.. +..+. |..+|.. |. .+ +.+.. +...+++++ .+||+ |+.||+|+|
T Consensus 89 ~~~~~-~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~-~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 89 VKKQD-VSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR--FGGVCEFSN-GLLVYSNEFNLGQIHI 163 (355)
T ss_dssp TTTEE-EEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE--EEEEEEEET-TEEEEEESSCTTCEEE
T ss_pred CCCcE-EEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc--CCceEEEEc-cEEEEeCCCcCcEEEE
Confidence 98643 44543 2222211 11 00 00001 223345555 55655 689999999
Q ss_pred Eecccccc---------------ccccccCCCCCeEEEEECCCCCEEEE-EcCCc-EEEEEcccccCCCCeeeeec-C-C
Q 047036 447 YSKTSMRQ---------------AKTAFPGLGSPITHVDVTYDGKWILG-TTDTY-LILICTLFSDKDGKTKTGFS-G-R 507 (634)
Q Consensus 447 WD~~t~r~---------------akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~t-IrLWD~~~~~~~G~~~~gF~-g-h 507 (634)
||+.+++. ....+.+|..+|++|+|||||++||+ +.|++ |+|||+. +|+++..|. | |
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~----~~~~~~~~~~g~h 239 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE----DGVLVREFRRGLD 239 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETT----TCCEEEEEECTTC
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECC----CCcEEEEEEcCCC
Confidence 99876420 15678999999999999999999999 99999 9999986 688888887 4 5
Q ss_pred CCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChh
Q 047036 508 MGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQ 567 (634)
Q Consensus 508 ~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~ 567 (634)
.+.. ..+.|+|. | ...++++.|+.|.|||+..
T Consensus 240 ~~~v------------------~~~~~s~~--------~--~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 240 RADV------------------VDMKWSTD--------G--SKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp CSCE------------------EEEEECTT--------S--CEEEEEETTCEEEEEESSC
T ss_pred CCcE------------------EEEEECCC--------C--CEEEEEECCCEEEEEEccC
Confidence 4210 13455554 3 2344457899999999974
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.81 E-value=1.1e-17 Score=170.85 Aligned_cols=230 Identities=13% Similarity=0.126 Sum_probs=155.3
Q ss_pred cEEEeee-CCCeEE-Ee---cCeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFL-VS---DLGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQ 331 (634)
Q Consensus 257 ~~LavG~-~D~sfv-v~---G~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~ 331 (634)
...++.+ +|+.++ +. +..|.+|....+. ....+..+....+.+|+ ++++.|+.++.++
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~-----~~~~~~~~~~v~~~~~s--------pdg~~l~~~~~~~---- 95 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNN-----VIATVPAGSSPQGVAVS--------PDGKQVYVTNMAS---- 95 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE-----EEEEEECSSSEEEEEEC--------TTSSEEEEEETTT----
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCe-----EEEEEECCCCccceEEC--------CCCCEEEEEECCC----
Confidence 4667777 777654 43 3689999865532 12233332222344444 4455554444332
Q ss_pred CCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEE-EEEeCCCeEEEEEcCCCCceEEecccCCCCcc
Q 047036 332 APGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSEST-FLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVL 410 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~l-aSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~ 410 (634)
++|++||+.+|+++..+..|.. +..++|+|+ ++.+ ++++.|++|++||+++++ ++..+..|
T Consensus 96 -~~v~v~d~~~~~~~~~~~~~~~---~~~~~~s~d--------g~~l~~~~~~~~~v~~~d~~~~~-~~~~~~~~----- 157 (391)
T 1l0q_A 96 -STLSVIDTTSNTVAGTVKTGKS---PLGLALSPD--------GKKLYVTNNGDKTVSVINTVTKA-VINTVSVG----- 157 (391)
T ss_dssp -TEEEEEETTTTEEEEEEECSSS---EEEEEECTT--------SSEEEEEETTTTEEEEEETTTTE-EEEEEECC-----
T ss_pred -CEEEEEECCCCeEEEEEeCCCC---cceEEECCC--------CCEEEEEeCCCCEEEEEECCCCc-EEEEEecC-----
Confidence 7999999999999999998764 345699998 4555 788999999999998764 34444321
Q ss_pred ccccccccccCcceEEEEECCCC-eE-EEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-E---cCC
Q 047036 411 HWTQGHQFSRGTNFQCFASTGDG-SI-VVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-T---TDT 484 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~dG-~I-ASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S---~D~ 484 (634)
....+++++++| +| ++++.|+.|++||+.+++ ....++ |...+.+++|+|||++|++ + .++
T Consensus 158 -----------~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~-~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~ 224 (391)
T 1l0q_A 158 -----------RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS-VIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFN 224 (391)
T ss_dssp -----------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCC
T ss_pred -----------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe-EEEEEe-cCCCccceEECCCCCEEEEEecCcCCC
Confidence 224788999998 56 678899999999998763 555555 5668999999999999998 5 589
Q ss_pred cEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEE-EcCCeEEEE
Q 047036 485 YLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVA-TVGKFSVIW 563 (634)
Q Consensus 485 tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~Ivt-Stg~~viiW 563 (634)
.|++||+. .++.+..+..|.. | ..+.|+|. | ...+++ +.++.|.+|
T Consensus 225 ~v~~~d~~----~~~~~~~~~~~~~-----~--------------~~~~~s~d--------g--~~l~~s~~~d~~v~v~ 271 (391)
T 1l0q_A 225 TVSMIDTG----TNKITARIPVGPD-----P--------------AGIAVTPD--------G--KKVYVALSFXNTVSVI 271 (391)
T ss_dssp EEEEEETT----TTEEEEEEECCSS-----E--------------EEEEECTT--------S--SEEEEEETTTTEEEEE
T ss_pred cEEEEECC----CCeEEEEEecCCC-----c--------------cEEEEccC--------C--CEEEEEcCCCCEEEEE
Confidence 99999975 4554444433221 0 12333333 2 234355 568999999
Q ss_pred eChh
Q 047036 564 DFQQ 567 (634)
Q Consensus 564 dl~~ 567 (634)
|+..
T Consensus 272 d~~~ 275 (391)
T 1l0q_A 272 DTAT 275 (391)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9873
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.78 E-value=1.2e-16 Score=163.28 Aligned_cols=200 Identities=13% Similarity=0.121 Sum_probs=141.2
Q ss_pred cEEEeee-CCCeEE-Eec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceE-EecCCCCCCC
Q 047036 257 QSLTLGA-LDNSFL-VSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMM-LMSPLKDGKP 330 (634)
Q Consensus 257 ~~LavG~-~D~sfv-v~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~ml-lsss~d~~~~ 330 (634)
....+++ +|+.++ +.+ ..|.||....+. ....+..+....+.+| +.+++.| ++++.+
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~-----~~~~~~~~~~~~~~~~--------s~dg~~l~~~~~~~---- 137 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT-----VAGTVKTGKSPLGLAL--------SPDGKKLYVTNNGD---- 137 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-----EEEEEECSSSEEEEEE--------CTTSSEEEEEETTT----
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCe-----EEEEEeCCCCcceEEE--------CCCCCEEEEEeCCC----
Confidence 4556666 666644 333 578888865532 1222333222233344 4445545 454443
Q ss_pred CCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEE-EEEeCCCeEEEEEcCCCCceEEecccCCCCc
Q 047036 331 QAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSEST-FLGLDDNRLCQWDMRDRSGIVQNMVKGDSPV 409 (634)
Q Consensus 331 ~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~l-aSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V 409 (634)
++|++||+.+|+++..+..|.. +..++|+|+ +..+ ++++.|++|++||++++. ++..+. |
T Consensus 138 --~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~d--------g~~l~~~~~~~~~v~~~d~~~~~-~~~~~~-~---- 198 (391)
T 1l0q_A 138 --KTVSVINTVTKAVINTVSVGRS---PKGIAVTPD--------GTKVYVANFDSMSISVIDTVTNS-VIDTVK-V---- 198 (391)
T ss_dssp --TEEEEEETTTTEEEEEEECCSS---EEEEEECTT--------SSEEEEEETTTTEEEEEETTTTE-EEEEEE-C----
T ss_pred --CEEEEEECCCCcEEEEEecCCC---cceEEECCC--------CCEEEEEeCCCCEEEEEECCCCe-EEEEEe-c----
Confidence 6999999999999999998865 245699998 4555 788899999999999864 344442 1
Q ss_pred cccccccccccCcceEEEEECCCC-eEEEEE---CCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEE-E-EcC
Q 047036 410 LHWTQGHQFSRGTNFQCFASTGDG-SIVVGS---LDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWIL-G-TTD 483 (634)
Q Consensus 410 ~~~~~g~~y~~~~~fssva~s~dG-~IASGS---~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~Ll-S-S~D 483 (634)
...+.+++++++| +|++++ .++.|++||+.+++ ....++.|. .+.+++|+|||++|+ + +.|
T Consensus 199 -----------~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~-~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d 265 (391)
T 1l0q_A 199 -----------EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK-ITARIPVGP-DPAGIAVTPDGKKVYVALSFX 265 (391)
T ss_dssp -----------SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE-EEEEEECCS-SEEEEEECTTSSEEEEEETTT
T ss_pred -----------CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe-EEEEEecCC-CccEEEEccCCCEEEEEcCCC
Confidence 1235788999998 788887 79999999998764 666777665 579999999999984 5 569
Q ss_pred CcEEEEEcccccCCCCeeeeecCCCC
Q 047036 484 TYLILICTLFSDKDGKTKTGFSGRMG 509 (634)
Q Consensus 484 ~tIrLWD~~~~~~~G~~~~gF~gh~~ 509 (634)
++|++||+. .|+.+..+..|..
T Consensus 266 ~~v~v~d~~----~~~~~~~~~~~~~ 287 (391)
T 1l0q_A 266 NTVSVIDTA----TNTITATMAVGKN 287 (391)
T ss_dssp TEEEEEETT----TTEEEEEEECSSS
T ss_pred CEEEEEECC----CCcEEEEEECCcC
Confidence 999999986 6787777776653
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.77 E-value=1.8e-16 Score=164.10 Aligned_cols=230 Identities=13% Similarity=0.119 Sum_probs=153.5
Q ss_pred EEEeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCC
Q 047036 258 SLTLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAP 333 (634)
Q Consensus 258 ~LavG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~ 333 (634)
..++.+ +++.+++.+ ..|.+|...... ....+..|. .+...+.++++++.|+.++..+ +
T Consensus 172 v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~-----~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~-----~ 234 (433)
T 3bws_A 172 VETISIPEHNELWVSQMQANAVHVFDLKTLA-----YKATVDLTG-------KWSKILLYDPIRDLVYCSNWIS-----E 234 (433)
T ss_dssp EEEEEEGGGTEEEEEEGGGTEEEEEETTTCC-----EEEEEECSS-------SSEEEEEEETTTTEEEEEETTT-----T
T ss_pred eeEEEEcCCCEEEEEECCCCEEEEEECCCce-----EEEEEcCCC-------CCeeEEEEcCCCCEEEEEecCC-----C
Confidence 445555 677776654 578888865432 222333321 1122334455556564444322 6
Q ss_pred cEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe--------CCCeEEEEEcCCCCceEEecccC
Q 047036 334 GVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL--------DDNRLCQWDMRDRSGIVQNMVKG 405 (634)
Q Consensus 334 TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS--------~D~tIklWD~R~~~~~Vq~l~gh 405 (634)
+|++||+.+|+++..+..|.. +..++|+|+ +..+++++ .|++|++||++++. ++..+. |
T Consensus 235 ~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~--------g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~-~~~~~~-~ 301 (433)
T 3bws_A 235 DISVIDRKTKLEIRKTDKIGL---PRGLLLSKD--------GKELYIAQFSASNQESGGGRLGIYSMDKEK-LIDTIG-P 301 (433)
T ss_dssp EEEEEETTTTEEEEECCCCSE---EEEEEECTT--------SSEEEEEEEESCTTCSCCEEEEEEETTTTE-EEEEEE-E
T ss_pred cEEEEECCCCcEEEEecCCCC---ceEEEEcCC--------CCEEEEEECCCCccccCCCeEEEEECCCCc-EEeecc-C
Confidence 999999999999999988764 355699998 56888888 58999999999754 333331 1
Q ss_pred CCCccccccccccccCcceEEEEECCCC-e-EEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-Ec
Q 047036 406 DSPVLHWTQGHQFSRGTNFQCFASTGDG-S-IVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TT 482 (634)
Q Consensus 406 ~s~V~~~~~g~~y~~~~~fssva~s~dG-~-IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~ 482 (634)
.....+++++|+| + +++++.|+.|++||+.+++ ....++ |...+.+|+|+|||++|++ +.
T Consensus 302 ---------------~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~-~~~~~~-~~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 302 ---------------PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK-VQKSIP-VFDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp ---------------EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE-EEEEEE-CSSSEEEEEECTTSSEEEEEEC
T ss_pred ---------------CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc-EEEEec-CCCCCCeEEEcCCCCEEEEEec
Confidence 1135678999998 4 4677999999999998764 555665 7788999999999999988 54
Q ss_pred ---------------CCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCC
Q 047036 483 ---------------DTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGK 547 (634)
Q Consensus 483 ---------------D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~ 547 (634)
|+.|++||+. +++.+..+.++.. | ..+.|+|+ |
T Consensus 365 ~~~~~~~~~~~~g~~dg~v~~~d~~----~~~~~~~~~~~~~-----~--------------~~~~~s~d--------g- 412 (433)
T 3bws_A 365 GPNHPTEGYLKKGLVLGKVYVIDTT----TDTVKEFWEAGNQ-----P--------------TGLDVSPD--------N- 412 (433)
T ss_dssp CCCCTTTCTTSCCSSCCEEEEEETT----TTEEEEEEECSSS-----E--------------EEEEECTT--------S-
T ss_pred CCCccccccccccccceEEEEEECC----CCcEEEEecCCCC-----C--------------ceEEEcCC--------C-
Confidence 4599999975 5665555543210 1 12344443 3
Q ss_pred CceEEEEEc-CCeEEEEeChh
Q 047036 548 QERHLVATV-GKFSVIWDFQQ 567 (634)
Q Consensus 548 ~E~~IvtSt-g~~viiWdl~~ 567 (634)
...++++. ++.|.+|++..
T Consensus 413 -~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 413 -RYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp -CEEEEEETTTTEEEEEEETT
T ss_pred -CEEEEEECCCCeEEEEEecC
Confidence 23445554 89999999863
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.76 E-value=1.7e-16 Score=164.38 Aligned_cols=199 Identities=8% Similarity=0.027 Sum_probs=135.5
Q ss_pred Eeee-CCCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCCcE
Q 047036 260 TLGA-LDNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGV 335 (634)
Q Consensus 260 avG~-~D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TI 335 (634)
++.+ +++.+++.+ ..|.+|....+.+........+.+| ..+...+.+..+++++++++.+ ++|
T Consensus 127 ~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~s~~~d------~~v 193 (433)
T 3bws_A 127 SVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKK-------LGFVETISIPEHNELWVSQMQA------NAV 193 (433)
T ss_dssp CCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTT-------CCEEEEEEEGGGTEEEEEEGGG------TEE
T ss_pred EEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCccccccc-------CCceeEEEEcCCCEEEEEECCC------CEE
Confidence 4555 566666654 4688888654331100000001122 1223334445556667777654 699
Q ss_pred EEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEE-EEEeCCCeEEEEEcCCCCceEEecccCCCCcccccc
Q 047036 336 QQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSEST-FLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQ 414 (634)
Q Consensus 336 rlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~l-aSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~ 414 (634)
++||+.+++++.++.+|...+ ..++|+|+ +..+ ++++.|++|++||++++. .+..+..
T Consensus 194 ~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~--------~~~l~~~~~~~~~i~~~d~~~~~-~~~~~~~---------- 252 (433)
T 3bws_A 194 HVFDLKTLAYKATVDLTGKWS--KILLYDPI--------RDLVYCSNWISEDISVIDRKTKL-EIRKTDK---------- 252 (433)
T ss_dssp EEEETTTCCEEEEEECSSSSE--EEEEEETT--------TTEEEEEETTTTEEEEEETTTTE-EEEECCC----------
T ss_pred EEEECCCceEEEEEcCCCCCe--eEEEEcCC--------CCEEEEEecCCCcEEEEECCCCc-EEEEecC----------
Confidence 999999999999999998875 45699998 4566 566689999999999764 3455432
Q ss_pred ccccccCcceEEEEECCCC-eEEEEE--------CCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE--EcC
Q 047036 415 GHQFSRGTNFQCFASTGDG-SIVVGS--------LDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG--TTD 483 (634)
Q Consensus 415 g~~y~~~~~fssva~s~dG-~IASGS--------~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS--S~D 483 (634)
...+.+++++|+| +|++++ .||.|++||+.+++ ....+ +|...+.+++|+|||++|+. +.|
T Consensus 253 ------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~-~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~ 324 (433)
T 3bws_A 253 ------IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK-LIDTI-GPPGNKRHIVSGNTENKIYVSDMCC 324 (433)
T ss_dssp ------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE-EEEEE-EEEECEEEEEECSSTTEEEEEETTT
T ss_pred ------CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc-EEeec-cCCCCcceEEECCCCCEEEEEecCC
Confidence 1236788999999 788888 58999999988753 43433 56678999999999987754 579
Q ss_pred CcEEEEEcccccCCCCeeeee
Q 047036 484 TYLILICTLFSDKDGKTKTGF 504 (634)
Q Consensus 484 ~tIrLWD~~~~~~~G~~~~gF 504 (634)
++|++||+. .++.+..+
T Consensus 325 ~~v~v~d~~----~~~~~~~~ 341 (433)
T 3bws_A 325 SKIEVYDLK----EKKVQKSI 341 (433)
T ss_dssp TEEEEEETT----TTEEEEEE
T ss_pred CEEEEEECC----CCcEEEEe
Confidence 999999975 45554444
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.68 E-value=1.2e-14 Score=154.08 Aligned_cols=151 Identities=11% Similarity=0.077 Sum_probs=109.1
Q ss_pred cccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEE-
Q 047036 301 IGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTF- 379 (634)
Q Consensus 301 ~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~la- 379 (634)
.+.+|+|++ ++|+.++.+. ...+|++||+.+|++. .+.+|...+ ..++|+|| |+.|+
T Consensus 182 ~~~~~Spdg--------~~la~~s~~~---~~~~i~~~d~~tg~~~-~l~~~~~~~--~~~~~spd--------g~~la~ 239 (415)
T 2hqs_A 182 MSPAWSPDG--------SKLAYVTFES---GRSALVIQTLANGAVR-QVASFPRHN--GAPAFSPD--------GSKLAF 239 (415)
T ss_dssp EEEEECTTS--------SEEEEEECTT---SSCEEEEEETTTCCEE-EEECCSSCE--EEEEECTT--------SSEEEE
T ss_pred eeeEEcCCC--------CEEEEEEecC---CCcEEEEEECCCCcEE-EeecCCCcc--cCEEEcCC--------CCEEEE
Confidence 445566654 4455555432 1258999999999985 577787765 45699999 55566
Q ss_pred EEeCCCe--EEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEEC-CC--cEEEEeccccc
Q 047036 380 LGLDDNR--LCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSL-DG--KIRLYSKTSMR 453 (634)
Q Consensus 380 SGS~D~t--IklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~-DG--tIRLWD~~t~r 453 (634)
+++.|+. |++||++++.. ..+..|. ..+.+++++|+| +||+++. +| .|.+||+.+++
T Consensus 240 ~~~~~g~~~i~~~d~~~~~~--~~l~~~~---------------~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 240 ALSKTGSLNLYVMDLASGQI--RQVTDGR---------------SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp EECTTSSCEEEEEETTTCCE--EECCCCS---------------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred EEecCCCceEEEEECCCCCE--EeCcCCC---------------CcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 7776654 99999987642 4554332 235788999999 6888886 45 67777987753
Q ss_pred cccccccCCCCCeEEEEECCCCCEEEE-EcC---CcEEEEEcc
Q 047036 454 QAKTAFPGLGSPITHVDVTYDGKWILG-TTD---TYLILICTL 492 (634)
Q Consensus 454 ~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D---~tIrLWD~~ 492 (634)
...+..|+..+.+++|||||++|++ +.+ ..|.+||+.
T Consensus 303 --~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 303 --PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp --CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred --EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 3456678889999999999999998 554 589999975
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.66 E-value=3.2e-16 Score=168.30 Aligned_cols=122 Identities=13% Similarity=0.000 Sum_probs=93.7
Q ss_pred eeEEEEecCCCCCCCCCCCEEE----EEeCCCeEEEEEcCCC-----Cc--e---EEecccCCCCccccccccccccCcc
Q 047036 358 ITMRDITNDTKSSQLDPSESTF----LGLDDNRLCQWDMRDR-----SG--I---VQNMVKGDSPVLHWTQGHQFSRGTN 423 (634)
Q Consensus 358 I~vvsfsPd~K~~q~~~g~~la----SGS~D~tIklWD~R~~-----~~--~---Vq~l~gh~s~V~~~~~g~~y~~~~~ 423 (634)
|..++|+|+ +.+|+ +|+.|++|++||+++. +. . +..+.+| ...
T Consensus 95 v~~l~~spd--------g~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h---------------~~~ 151 (434)
T 2oit_A 95 IHHLALSCD--------NLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA---------------GGM 151 (434)
T ss_dssp EEEEEECTT--------SCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG---------------GGS
T ss_pred ccEEEEcCC--------CCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCC---------------CCc
Confidence 356799998 67888 8999999999998753 11 1 2233323 235
Q ss_pred eEEEEECCC-C-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCe
Q 047036 424 FQCFASTGD-G-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKT 500 (634)
Q Consensus 424 fssva~s~d-G-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~ 500 (634)
+.+++++|+ + .||+|+.||+|||||+.++. ......+|...|++|+|||||++|++ +.|++|++||++ |+.
T Consensus 152 V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~-~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-----~~~ 225 (434)
T 2oit_A 152 VIDMKWNPTVPSMVAVCLADGSIAVLQVTETV-KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-----LQE 225 (434)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEEESSSE-EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-----CCE
T ss_pred eEEEEECCCCCCEEEEEECCCeEEEEEcCCCc-ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-----Ccc
Confidence 789999997 5 79999999999999988753 44455679999999999999999999 899999999964 444
Q ss_pred eeeecCCC
Q 047036 501 KTGFSGRM 508 (634)
Q Consensus 501 ~~gF~gh~ 508 (634)
+..+..|.
T Consensus 226 ~~~~~~~~ 233 (434)
T 2oit_A 226 KKVIPCPP 233 (434)
T ss_dssp EEEECCCT
T ss_pred cccccCCc
Confidence 55555443
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.65 E-value=3.8e-14 Score=156.91 Aligned_cols=166 Identities=12% Similarity=0.128 Sum_probs=119.1
Q ss_pred EeCCcceEEecCCCCCCCCCCcEEEEeC--CCCcEEEEEeccCCCcceeEEEEec----CCCCCCCCCCCEEEEEe-CCC
Q 047036 313 MRGETNMMLMSPLKDGKPQAPGVQQLDI--ETGKIVTEWKFEKDGTDITMRDITN----DTKSSQLDPSESTFLGL-DDN 385 (634)
Q Consensus 313 ~~~D~~mllsss~d~~~~~~~TIrlWDl--eTGK~V~~lkgH~~~V~I~vvsfsP----d~K~~q~~~g~~laSGS-~D~ 385 (634)
+++|++.|++++.+ ++|++||+ .+++++.++..+.. + .-++|+| | |+.+++++ .++
T Consensus 186 ~spdg~~l~v~~~d------~~V~v~D~~~~t~~~~~~i~~g~~-p--~~va~sp~~~~d--------g~~l~v~~~~~~ 248 (543)
T 1nir_A 186 MSASGRYLLVIGRD------ARIDMIDLWAKEPTKVAEIKIGIE-A--RSVESSKFKGYE--------DRYTIAGAYWPP 248 (543)
T ss_dssp ECTTSCEEEEEETT------SEEEEEETTSSSCEEEEEEECCSE-E--EEEEECCSTTCT--------TTEEEEEEEESS
T ss_pred ECCCCCEEEEECCC------CeEEEEECcCCCCcEEEEEecCCC-c--ceEEeCCCcCCC--------CCEEEEEEccCC
Confidence 34455566666554 68999999 99999999996554 2 4569999 8 67888887 589
Q ss_pred eEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC--eEEEEECCCcEEEEecccccccc-ccccCC
Q 047036 386 RLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG--SIVVGSLDGKIRLYSKTSMRQAK-TAFPGL 462 (634)
Q Consensus 386 tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG--~IASGS~DGtIRLWD~~t~r~ak-t~L~GH 462 (634)
+|.+||..+.+ +++.+..+...+ .+..|.....+.++++++++ .+++.+.+|+|.+||..+.+..+ +++ .+
T Consensus 249 ~v~v~D~~t~~-~~~~i~~~g~~~----~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~ 322 (543)
T 1nir_A 249 QFAIMDGETLE-PKQIVSTRGMTV----DTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GA 322 (543)
T ss_dssp EEEEEETTTCC-EEEEEECCEECS----SSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-EC
T ss_pred eEEEEeccccc-cceeecccCccc----CccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-cc
Confidence 99999998865 456664221110 01112223356788999876 57888999999999987654222 234 47
Q ss_pred CCCeEEEEECCCCCEEEE-E-cCCcEEEEEcccccCCCCeeeeec
Q 047036 463 GSPITHVDVTYDGKWILG-T-TDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 463 ~d~ItsVdfSpDGk~LlS-S-~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
+..+.++.|+|||++|++ + .+++|.+||+. +|+++..+.
T Consensus 323 ~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~----tg~l~~~i~ 363 (543)
T 1nir_A 323 APFLHDGGWDSSHRYFMTAANNSNKVAVIDSK----DRRLSALVD 363 (543)
T ss_dssp CSSCCCEEECTTSCEEEEEEGGGTEEEEEETT----TTEEEEEEE
T ss_pred CcCccCceECCCCCEEEEEecCCCeEEEEECC----CCeEEEeec
Confidence 788999999999999876 4 48999999986 677666554
No 130
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.65 E-value=1.9e-15 Score=162.31 Aligned_cols=151 Identities=12% Similarity=0.070 Sum_probs=111.2
Q ss_pred eeeEEeCCcceEE----ecCCCCCCCCCCcEEEEeCCCC--------c---EEEEEeccCCCcceeEEEEecCCCCCCCC
Q 047036 309 KALLMRGETNMML----MSPLKDGKPQAPGVQQLDIETG--------K---IVTEWKFEKDGTDITMRDITNDTKSSQLD 373 (634)
Q Consensus 309 ~~mL~~~D~~mll----sss~d~~~~~~~TIrlWDleTG--------K---~V~~lkgH~~~V~I~vvsfsPd~K~~q~~ 373 (634)
..+.++.++++|+ +++.| ++|++||+.++ + .++.+.+|...| ..++|+|+.
T Consensus 96 ~~l~~spdg~~lav~~~sgs~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V--~~v~~~p~~------ 161 (434)
T 2oit_A 96 HHLALSCDNLTLSACMMSSEYG------SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMV--IDMKWNPTV------ 161 (434)
T ss_dssp EEEEECTTSCEEEEEEEETTTE------EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSE--EEEEECSSC------
T ss_pred cEEEEcCCCCEEEEEEeccCCC------ceEEEEEccccccCCcCCcceeeeeeccCCCCCce--EEEEECCCC------
Confidence 3444555566666 45544 79999999876 2 256788899876 466999972
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccc
Q 047036 374 PSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSM 452 (634)
Q Consensus 374 ~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~ 452 (634)
+.++++|+.|++|++||++++.. +....+| ...++|++++|+| +||+|+.||+|++||..+
T Consensus 162 -~~~las~s~Dg~v~iwD~~~~~~-~~~~~~~---------------~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~- 223 (434)
T 2oit_A 162 -PSMVAVCLADGSIAVLQVTETVK-VCATLPS---------------TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTL- 223 (434)
T ss_dssp -TTEEEEEETTSCEEEEEESSSEE-EEEEECG---------------GGCEEEEEECTTSSCEEEEETTSCEEEECTTC-
T ss_pred -CCEEEEEECCCeEEEEEcCCCcc-eeeccCC---------------CCceeEEEEcCCCCEEEEEcCCCcEEEEccCC-
Confidence 46899999999999999998643 2233222 2357899999999 899999999999999872
Q ss_pred ccccccccC-------CCCCeEEEEECCCCCEEEE--EcCC------cEEEEEcc
Q 047036 453 RQAKTAFPG-------LGSPITHVDVTYDGKWILG--TTDT------YLILICTL 492 (634)
Q Consensus 453 r~akt~L~G-------H~d~ItsVdfSpDGk~LlS--S~D~------tIrLWD~~ 492 (634)
. .+..++. |...|.+|+|++++.+|++ +.|+ .+++|++.
T Consensus 224 ~-~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 224 Q-EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp C-EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred c-ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEec
Confidence 2 3333333 3348999999999999987 3342 38999986
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=2.3e-14 Score=137.49 Aligned_cols=146 Identities=14% Similarity=0.057 Sum_probs=101.4
Q ss_pred CCcceEEecCCCCCCCCCCcEEEEeCCC-CcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe--CCCeEEEEE
Q 047036 315 GETNMMLMSPLKDGKPQAPGVQQLDIET-GKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL--DDNRLCQWD 391 (634)
Q Consensus 315 ~D~~mllsss~d~~~~~~~TIrlWDleT-GK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS--~D~tIklWD 391 (634)
+++++|++++. +.|++||+.+ |+....+.+|.... +..++|+|+ +..+++++ .++.+++|.
T Consensus 51 pdg~~l~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~spd--------g~~l~~~~~~~~~~~~l~~ 114 (297)
T 2ojh_A 51 PDGKYLLLNSE-------GLLYRLSLAGDPSPEKVDTGFATIC-NNDHGISPD--------GALYAISDKVEFGKSAIYL 114 (297)
T ss_dssp TTSSEEEEEET-------TEEEEEESSSCCSCEECCCTTCCCB-CSCCEECTT--------SSEEEEEECTTTSSCEEEE
T ss_pred CCCCEEEEEcC-------CeEEEEeCCCCCCceEecccccccc-ccceEECCC--------CCEEEEEEeCCCCcceEEE
Confidence 34445555542 5899999999 99888887774321 245699999 67899888 334555555
Q ss_pred cCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEE-EEECCCcEEEEeccccccccccccCCCCCeEEE
Q 047036 392 MRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIV-VGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHV 469 (634)
Q Consensus 392 ~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IA-SGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsV 469 (634)
.......++.+.. .....+++++|+| +|+ +++.|+.++||++.........+..|...|.++
T Consensus 115 ~~~~~~~~~~~~~----------------~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 178 (297)
T 2ojh_A 115 LPSTGGTPRLMTK----------------NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGP 178 (297)
T ss_dssp EETTCCCCEECCS----------------SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEE
T ss_pred EECCCCceEEeec----------------CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccc
Confidence 4322222233321 1125678899999 566 788999999999532112345677788999999
Q ss_pred EECCCCCEEEE-E-cCCcEEEEEcc
Q 047036 470 DVTYDGKWILG-T-TDTYLILICTL 492 (634)
Q Consensus 470 dfSpDGk~LlS-S-~D~tIrLWD~~ 492 (634)
+|+|||++|+. + .++.++||++.
T Consensus 179 ~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 179 DYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eECCCCCEEEEEecCCCCccEEEEC
Confidence 99999999987 5 48999999975
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.62 E-value=3.1e-13 Score=134.73 Aligned_cols=195 Identities=12% Similarity=0.075 Sum_probs=122.4
Q ss_pred Eeee-CCCeEEE-e---cCeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCCc
Q 047036 260 TLGA-LDNSFLV-S---DLGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPG 334 (634)
Q Consensus 260 avG~-~D~sfvv-~---G~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~T 334 (634)
.+++ +|+.+++ . +.+|.+|....+.+. ...+..+. .|...+.+++++++|+++..+. +..+
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~----~~~~~~~~-------~~~~~~~~s~dg~~l~~~~~~~---~~~~ 109 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK----VVAIQEGQ-------SSMADVDITPDDQFAVTVTGLN---HPFN 109 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCE----EEEEEECS-------SCCCCEEECTTSSEEEECCCSS---SSCE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee----EEecccCC-------CCccceEECCCCCEEEEecCCC---Cccc
Confidence 6666 7776333 2 247888876544320 11222221 2222233344455555433321 1128
Q ss_pred EEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCe-EEEEEcCCCCceEEecccCCCCccccc
Q 047036 335 VQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNR-LCQWDMRDRSGIVQNMVKGDSPVLHWT 413 (634)
Q Consensus 335 IrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~t-IklWD~R~~~~~Vq~l~gh~s~V~~~~ 413 (634)
|++||+.+|++++.+..+... ..++|+|+++ .+++++..+++ |.+||+...+.++. ...
T Consensus 110 i~v~d~~~~~~~~~~~~~~~~---~~~~~spdg~-------~l~~~~~~~~~~i~~~~~~~~g~~~~-~~~--------- 169 (331)
T 3u4y_A 110 MQSYSFLKNKFISTIPIPYDA---VGIAISPNGN-------GLILIDRSSANTVRRFKIDADGVLFD-TGQ--------- 169 (331)
T ss_dssp EEEEETTTTEEEEEEECCTTE---EEEEECTTSS-------CEEEEEETTTTEEEEEEECTTCCEEE-EEE---------
T ss_pred EEEEECCCCCeEEEEECCCCc---cceEECCCCC-------EEEEEecCCCceEEEEEECCCCcEee-cCC---------
Confidence 999999999999998876652 4569999932 25566677788 99999986544321 100
Q ss_pred cccccccCcceEEEEECCCC-eEEE-EECCCcEEEEeccccccc---cccccCCCCCeEEEEECCCCCEEEE--EcCCcE
Q 047036 414 QGHQFSRGTNFQCFASTGDG-SIVV-GSLDGKIRLYSKTSMRQA---KTAFPGLGSPITHVDVTYDGKWILG--TTDTYL 486 (634)
Q Consensus 414 ~g~~y~~~~~fssva~s~dG-~IAS-GS~DGtIRLWD~~t~r~a---kt~L~GH~d~ItsVdfSpDGk~LlS--S~D~tI 486 (634)
..........+++++|+| +|++ +..++.|++||+.+++ . ...++. +..+.+++|||||++|+. ..++.|
T Consensus 170 --~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~-~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i 245 (331)
T 3u4y_A 170 --EFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPE-NITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDV 245 (331)
T ss_dssp --EEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT-SCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEE
T ss_pred --ccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc-ccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEE
Confidence 000112235788999999 4654 5578999999998764 4 455664 466789999999998876 347889
Q ss_pred EEEEcc
Q 047036 487 ILICTL 492 (634)
Q Consensus 487 rLWD~~ 492 (634)
.+||+.
T Consensus 246 ~~~d~~ 251 (331)
T 3u4y_A 246 FNFNQL 251 (331)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 999975
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.62 E-value=9.9e-14 Score=147.10 Aligned_cols=209 Identities=14% Similarity=0.114 Sum_probs=139.9
Q ss_pred cEEEeee-CCCeEEEec------CeeeEEEccCCceecceeEEEecCCC-CCcccccCcceeeEEeCCcceEE-ecCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD------LGLQVYRNYNRGIHNKGVSVRFDGGS-SKIGSNSTPKKALLMRGETNMML-MSPLKD 327 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G------~~igV~k~~~~gl~~~~~~~~~~~~~-~~~g~~fsP~~~mL~~~D~~mll-sss~d~ 327 (634)
...++.+ +|+.+++.+ ..|.+|....+. ...+..+. ...+.+|+|++ +.|+ +++.+.
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~------~~~l~~~~~~~~~~~~spdg--------~~la~~~~~~g 245 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA------VRQVASFPRHNGAPAFSPDG--------SKLAFALSKTG 245 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC------EEEEECCSSCEEEEEECTTS--------SEEEEEECTTS
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc------EEEeecCCCcccCEEEcCCC--------CEEEEEEecCC
Confidence 4667777 788777643 278888765432 22333331 12344555554 4444 333321
Q ss_pred CCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC-C--eEEEEEcCCCCceEEeccc
Q 047036 328 GKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD-N--RLCQWDMRDRSGIVQNMVK 404 (634)
Q Consensus 328 ~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D-~--tIklWD~R~~~~~Vq~l~g 404 (634)
...|++||+.+|++ ..+.+|...+ ..++|+|| |+.|++++.+ + .|++||+.++.. ..+..
T Consensus 246 ----~~~i~~~d~~~~~~-~~l~~~~~~~--~~~~~spd--------g~~l~~~s~~~g~~~i~~~d~~~~~~--~~l~~ 308 (415)
T 2hqs_A 246 ----SLNLYVMDLASGQI-RQVTDGRSNN--TEPTWFPD--------SQNLAFTSDQAGRPQVYKVNINGGAP--QRITW 308 (415)
T ss_dssp ----SCEEEEEETTTCCE-EECCCCSSCE--EEEEECTT--------SSEEEEEECTTSSCEEEEEETTSSCC--EECCC
T ss_pred ----CceEEEEECCCCCE-EeCcCCCCcc--cceEECCC--------CCEEEEEECCCCCcEEEEEECCCCCE--EEEec
Confidence 25699999999987 6788888765 45699999 6778887764 4 788889887542 33322
Q ss_pred CCCCccccccccccccCcceEEEEECCCC-eEEEEECC---CcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE
Q 047036 405 GDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLD---GKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG 480 (634)
Q Consensus 405 h~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~D---GtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS 480 (634)
|. ..+.+++++|+| +||+++.+ +.|++||+.+++ . ..|..|. .+.+++|||||++|++
T Consensus 309 ~~---------------~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~-~-~~l~~~~-~~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 309 EG---------------SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG-V-QVLSSTF-LDETPSLAPNGTMVIY 370 (415)
T ss_dssp SS---------------SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC-E-EECCCSS-SCEEEEECTTSSEEEE
T ss_pred CC---------------CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC-E-EEecCCC-CcCCeEEcCCCCEEEE
Confidence 21 235678999999 78888764 689999998763 3 4566665 8999999999999998
Q ss_pred -EcCC---cEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCC
Q 047036 481 -TTDT---YLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPL 523 (634)
Q Consensus 481 -S~D~---tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe 523 (634)
+.++ .|.+||+ +|+.+..+.+|.+. -+.+...|+
T Consensus 371 ~s~~~~~~~l~~~d~-----~g~~~~~l~~~~~~----v~~~~~~~~ 408 (415)
T 2hqs_A 371 SSSQGMGSVLNLVST-----DGRFKARLPATDGQ----VKFPAWSPY 408 (415)
T ss_dssp EEEETTEEEEEEEET-----TSCCEEECCCSSSE----EEEEEECCC
T ss_pred EEcCCCccEEEEEEC-----CCCcEEEeeCCCCC----CcCCccccc
Confidence 6666 7999996 46666667766542 244555554
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.60 E-value=4.8e-13 Score=133.65 Aligned_cols=175 Identities=8% Similarity=0.089 Sum_probs=121.0
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCc-------ceeEEEEecCCCCCCCCCCCEEEEEe--CCCeEEEEEcCCCCceEEecc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGT-------DITMRDITNDTKSSQLDPSESTFLGL--DDNRLCQWDMRDRSGIVQNMV 403 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V-------~I~vvsfsPd~K~~q~~~g~~laSGS--~D~tIklWD~R~~~~~Vq~l~ 403 (634)
++|++||+.+|+++..+..+...- .+..++|+|+ +..++++. .+++|.+||++++. .+..+.
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d--------g~~l~~~~~~~~~~i~~~d~~~~~-~~~~~~ 181 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDA--------TNTVYISGIGKESVIWVVDGGNIK-LKTAIQ 181 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETT--------TTEEEEEEESSSCEEEEEETTTTE-EEEEEC
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCC--------CCEEEEEecCCCceEEEEcCCCCc-eEEEec
Confidence 689999999999999998765321 0134599998 56666665 58999999998754 345543
Q ss_pred cCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccccccccc----CCCCCeEEEEECCCCCEE
Q 047036 404 KGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFP----GLGSPITHVDVTYDGKWI 478 (634)
Q Consensus 404 gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~----GH~d~ItsVdfSpDGk~L 478 (634)
.+. ....+++++++| +|++++.++.|.+||..+++ ....++ ++...+.+|+|+|||++|
T Consensus 182 ~~~---------------~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l 245 (353)
T 3vgz_A 182 NTG---------------KMSTGLALDSEGKRLYTTNADGELITIDTADNK-ILSRKKLLDDGKEHFFINISLDTARQRA 245 (353)
T ss_dssp CCC---------------TTCCCCEEETTTTEEEEECTTSEEEEEETTTTE-EEEEEECCCSSSCCCEEEEEEETTTTEE
T ss_pred CCC---------------CccceEEECCCCCEEEEEcCCCeEEEEECCCCe-EEEEEEcCCCCCCcccceEEECCCCCEE
Confidence 111 113456788988 79999999999999998764 444443 356678999999999988
Q ss_pred EE-Ec-CCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEE-
Q 047036 479 LG-TT-DTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVAT- 555 (634)
Q Consensus 479 lS-S~-D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtS- 555 (634)
+. +. ++.|.+||+. +|+.+..+.... ...+.|+|+ | ...++++
T Consensus 246 ~~~~~~~~~v~~~d~~----~~~~~~~~~~~~--------------------~~~~~~s~d--------g--~~l~v~~~ 291 (353)
T 3vgz_A 246 FITDSKAAEVLVVDTR----NGNILAKVAAPE--------------------SLAVLFNPA--------R--NEAYVTHR 291 (353)
T ss_dssp EEEESSSSEEEEEETT----TCCEEEEEECSS--------------------CCCEEEETT--------T--TEEEEEET
T ss_pred EEEeCCCCEEEEEECC----CCcEEEEEEcCC--------------------CceEEECCC--------C--CEEEEEEC
Confidence 76 43 5899999975 455443333110 012444444 3 2455565
Q ss_pred cCCeEEEEeCh
Q 047036 556 VGKFSVIWDFQ 566 (634)
Q Consensus 556 tg~~viiWdl~ 566 (634)
.++.|.+||+.
T Consensus 292 ~~~~v~~~d~~ 302 (353)
T 3vgz_A 292 QAGKVSVIDAK 302 (353)
T ss_dssp TTTEEEEEETT
T ss_pred CCCeEEEEECC
Confidence 58999999986
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.59 E-value=4.1e-13 Score=132.55 Aligned_cols=171 Identities=9% Similarity=0.026 Sum_probs=112.7
Q ss_pred CcEEEEeCCCCcEEEEEeccC-----CCcceeEEEEecCCCCCCCCCCCEEEEEe------------CCCeEEEEEcCCC
Q 047036 333 PGVQQLDIETGKIVTEWKFEK-----DGTDITMRDITNDTKSSQLDPSESTFLGL------------DDNRLCQWDMRDR 395 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~-----~~V~I~vvsfsPd~K~~q~~~g~~laSGS------------~D~tIklWD~R~~ 395 (634)
++|++||+.+|+++.++.... ..+ ..++|+|+ ++.+++++ .++.|.+||+.++
T Consensus 56 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~d--------g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 125 (337)
T 1pby_B 56 ESLVKIDLVTGETLGRIDLSTPEERVKSL--FGAALSPD--------GKTLAIYESPVRLELTHFEVQPTRVALYDAETL 125 (337)
T ss_dssp TEEEEEETTTCCEEEEEECCBTTEEEECT--TCEEECTT--------SSEEEEEEEEEEECSSCEEECCCEEEEEETTTT
T ss_pred CeEEEEECCCCCeEeeEEcCCcccccccc--cceEECCC--------CCEEEEEecccccccccccccCceEEEEECCCC
Confidence 689999999999999887432 122 24599998 56788876 6899999999875
Q ss_pred CceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccccccccc--------------
Q 047036 396 SGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFP-------------- 460 (634)
Q Consensus 396 ~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~-------------- 460 (634)
. .+..+.. .....+++++|+| +|+++ ++.|++||+.+++ ....++
T Consensus 126 ~-~~~~~~~----------------~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~s~dg 185 (337)
T 1pby_B 126 S-RRKAFEA----------------PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGT-LVEDKPIQSWEAETYAQPDV 185 (337)
T ss_dssp E-EEEEEEC----------------CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTE-EEEEECSTTTTTTTBCCCBC
T ss_pred c-EEEEEeC----------------CCCcceeEECCCCCEEEEe--CCeEEEEECCCCc-EeeeeeccccCCCceeCCCc
Confidence 4 3444421 1123466789998 58777 6899999987653 222222
Q ss_pred ----------------------------------------------------CCCCCeEEEEECCCCCEEEEEcCCcEEE
Q 047036 461 ----------------------------------------------------GLGSPITHVDVTYDGKWILGTTDTYLIL 488 (634)
Q Consensus 461 ----------------------------------------------------GH~d~ItsVdfSpDGk~LlSS~D~tIrL 488 (634)
.|...+.+|+|||||++|+++ +++|.+
T Consensus 186 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~ 264 (337)
T 1pby_B 186 LAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLES 264 (337)
T ss_dssp CCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEE
T ss_pred cEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEE
Confidence 122345679999999998887 789999
Q ss_pred EEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChh
Q 047036 489 ICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQ 567 (634)
Q Consensus 489 WD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~ 567 (634)
||+. .++.+..+..+. . ...+.|+|+ | ...++++.++.|.+||++.
T Consensus 265 ~d~~----~~~~~~~~~~~~---------------~----~~~~~~s~d--------g--~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 265 FDLE----KNASIKRVPLPH---------------S----YYSVNVSTD--------G--STVWLGGALGDLAAYDAET 310 (337)
T ss_dssp EETT----TTEEEEEEECSS---------------C----CCEEEECTT--------S--CEEEEESBSSEEEEEETTT
T ss_pred EECC----CCcCcceecCCC---------------c----eeeEEECCC--------C--CEEEEEcCCCcEEEEECcC
Confidence 9974 444433332110 0 012344443 3 2455566788999999873
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.56 E-value=1.6e-12 Score=128.70 Aligned_cols=150 Identities=11% Similarity=0.201 Sum_probs=99.7
Q ss_pred EeCCcceEEecCCCCCCCCCCcEEEEeC---CCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe-CCCeEE
Q 047036 313 MRGETNMMLMSPLKDGKPQAPGVQQLDI---ETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL-DDNRLC 388 (634)
Q Consensus 313 ~~~D~~mllsss~d~~~~~~~TIrlWDl---eTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS-~D~tIk 388 (634)
++++++.|+.+...+ ++|++||+ .+++.+..+.++.. + ..++|+|+ ++.+++++ .+++|+
T Consensus 91 ~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~-~--~~~~~s~d--------g~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 91 TDHQGQFVFVGSYNA-----GNVSVTRLEDGLPVGVVDVVEGLDG-C--HSANISPD--------NRTLWVPALKQDRIC 154 (343)
T ss_dssp ECTTSSEEEEEETTT-----TEEEEEEEETTEEEEEEEEECCCTT-B--CCCEECTT--------SSEEEEEEGGGTEEE
T ss_pred EcCCCCEEEEEecCC-----CeEEEEECCCCccccccccccCCCC-c--eEEEECCC--------CCEEEEecCCCCEEE
Confidence 344455454444322 68999999 66677888877764 2 34599998 56677776 899999
Q ss_pred EEEcCCCCceEE----ecccCCCCccccccccccccCcceEEEEECCCC-eEEEE-ECCCcEEEEeccc--cc----ccc
Q 047036 389 QWDMRDRSGIVQ----NMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVG-SLDGKIRLYSKTS--MR----QAK 456 (634)
Q Consensus 389 lWD~R~~~~~Vq----~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASG-S~DGtIRLWD~~t--~r----~ak 456 (634)
+||++..+.+.. .+.. .......+++++|+| +|+++ +.++.|++||+.. ++ ...
T Consensus 155 ~~d~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~ 220 (343)
T 1ri6_A 155 LFTVSDDGHLVAQDPAEVTT--------------VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL 220 (343)
T ss_dssp EEEECTTSCEEEEEEEEEEC--------------STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEE
T ss_pred EEEecCCCceeeeccccccc--------------CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeec
Confidence 999987333211 1110 012235678999999 56555 4899999999843 21 011
Q ss_pred cccc-CC--CCCeEEEEECCCCCEEEE-E-cCCcEEEEEcc
Q 047036 457 TAFP-GL--GSPITHVDVTYDGKWILG-T-TDTYLILICTL 492 (634)
Q Consensus 457 t~L~-GH--~d~ItsVdfSpDGk~LlS-S-~D~tIrLWD~~ 492 (634)
..++ +| ...+.+|+|+|||++|+. . .++.|++||+.
T Consensus 221 ~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 221 DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp ECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 1233 22 346779999999999985 3 68999999975
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.56 E-value=1.8e-12 Score=124.21 Aligned_cols=193 Identities=12% Similarity=0.026 Sum_probs=123.7
Q ss_pred cEEEeee-CCCeEEEec--CeeeEEEccC-CceecceeEEEecCC--CCCcccccCcceeeEEeCCcceEEecCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD--LGLQVYRNYN-RGIHNKGVSVRFDGG--SSKIGSNSTPKKALLMRGETNMMLMSPLKDGKP 330 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G--~~igV~k~~~-~gl~~~~~~~~~~~~--~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~ 330 (634)
...++.+ +|+.+++.+ .+|.+|.... ... ...+..+ .......|+|++ ++|+.+..+. .
T Consensus 43 ~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~-----~~~~~~~~~~~~~~~~~spdg--------~~l~~~~~~~--~ 107 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSP-----EKVDTGFATICNNDHGISPDG--------ALYAISDKVE--F 107 (297)
T ss_dssp CCEEEEECTTSSEEEEEETTEEEEEESSSCCSC-----EECCCTTCCCBCSCCEECTTS--------SEEEEEECTT--T
T ss_pred ceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCc-----eEeccccccccccceEECCCC--------CEEEEEEeCC--C
Confidence 3455666 777766643 5777777544 321 1111121 112344555544 4555554221 1
Q ss_pred CCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEE-EEeCCCeEEEEEcCCCCceEEecccCCCCc
Q 047036 331 QAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTF-LGLDDNRLCQWDMRDRSGIVQNMVKGDSPV 409 (634)
Q Consensus 331 ~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~la-SGS~D~tIklWD~R~~~~~Vq~l~gh~s~V 409 (634)
....|++||+.+++ ++.+..+.. + ..++|+|+ +..++ +++.|+++++|+++.....+..+..|
T Consensus 108 ~~~~l~~~~~~~~~-~~~~~~~~~-~--~~~~~spd--------g~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~---- 171 (297)
T 2ojh_A 108 GKSAIYLLPSTGGT-PRLMTKNLP-S--YWHGWSPD--------GKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG---- 171 (297)
T ss_dssp SSCEEEEEETTCCC-CEECCSSSS-E--EEEEECTT--------SSEEEEEEEETTEEEEEEEETTTCCEEECCCS----
T ss_pred CcceEEEEECCCCc-eEEeecCCC-c--cceEECCC--------CCEEEEEECCCCceEEEEEECCCCcceEcccC----
Confidence 12567777777776 556666554 3 45699999 45555 88899999999975433223444322
Q ss_pred cccccccccccCcceEEEEECCCC-eEEEEE-CCCcEEEEecc-ccccccccccCCCCCeEEEEECCCCCEEEE-EcC--
Q 047036 410 LHWTQGHQFSRGTNFQCFASTGDG-SIVVGS-LDGKIRLYSKT-SMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTD-- 483 (634)
Q Consensus 410 ~~~~~g~~y~~~~~fssva~s~dG-~IASGS-~DGtIRLWD~~-t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D-- 483 (634)
...+.+++++|+| +|++++ .++.++||++. .. .....+..|...|.+++|||||++|+. +.+
T Consensus 172 -----------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 239 (297)
T 2ojh_A 172 -----------EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-SSVERITDSAYGDWFPHPSPSGDKVVFVSYDAD 239 (297)
T ss_dssp -----------SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-SCEEECCCCSEEEEEEEECTTSSEEEEEEEETT
T ss_pred -----------CCccccceECCCCCEEEEEecCCCCccEEEECCCC-CCcEEEecCCcccCCeEECCCCCEEEEEEcCCC
Confidence 2245788999999 577665 59999999975 22 245677888889999999999999988 655
Q ss_pred ---------CcEEEEEcc
Q 047036 484 ---------TYLILICTL 492 (634)
Q Consensus 484 ---------~tIrLWD~~ 492 (634)
..|.+||+.
T Consensus 240 ~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp CCSCCSSEEEEEEEEETT
T ss_pred CCcccccCceEEEEEecC
Confidence 569999974
No 138
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.55 E-value=8.1e-13 Score=131.44 Aligned_cols=172 Identities=13% Similarity=0.032 Sum_probs=113.2
Q ss_pred CcEEEEeCCCCcEEEEEeccCC------CcceeEEEEecCCCCCCCCCCCEEEEEeCC------------CeEEEEEcCC
Q 047036 333 PGVQQLDIETGKIVTEWKFEKD------GTDITMRDITNDTKSSQLDPSESTFLGLDD------------NRLCQWDMRD 394 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~------~V~I~vvsfsPd~K~~q~~~g~~laSGS~D------------~tIklWD~R~ 394 (634)
++|++||+.+|+++..+..+.. .+ ..++|+|+ |+.+++++.+ ++|++||+.+
T Consensus 65 ~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~--~~~~~spd--------g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 65 GDIYGIDLDTCKNTFHANLSSVPGEVGRSM--YSFAISPD--------GKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp TEEEEEETTTTEEEEEEESCCSTTEEEECS--SCEEECTT--------SSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred CcEEEEeCCCCcEEEEEEcccccccccccc--cceEECCC--------CCEEEEEcccccccccccccCCCeEEEEECCC
Confidence 6899999999999998875331 12 24589999 6788888865 9999999986
Q ss_pred CCc--eEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCC----------
Q 047036 395 RSG--IVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGL---------- 462 (634)
Q Consensus 395 ~~~--~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH---------- 462 (634)
+.. .+..+. ....+.+++++|+|.|++++ +.|++||+.+++ ....++.+
T Consensus 135 ~~~~~~~~~~~----------------~~~~~~~~~~s~dg~l~~~~--~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~ 195 (349)
T 1jmx_B 135 GLEAKPVRTFP----------------MPRQVYLMRAADDGSLYVAG--PDIYKMDVKTGK-YTVALPLRNWNRKGYSAP 195 (349)
T ss_dssp GGGBCCSEEEE----------------CCSSCCCEEECTTSCEEEES--SSEEEECTTTCC-EEEEECSTTCCCTTBCCC
T ss_pred ccccceeeecc----------------CCCcccceeECCCCcEEEcc--CcEEEEeCCCCc-eeccccccccCCccccCc
Confidence 421 112211 11135678899999766664 449999987764 33334322
Q ss_pred ----------------------------------------------------------CCCeEEEEECC-CCCEEEEEcC
Q 047036 463 ----------------------------------------------------------GSPITHVDVTY-DGKWILGTTD 483 (634)
Q Consensus 463 ----------------------------------------------------------~d~ItsVdfSp-DGk~LlSS~D 483 (634)
+..+.+++||| ||++|+++ +
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~ 274 (349)
T 1jmx_B 196 DVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-L 274 (349)
T ss_dssp BCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-E
T ss_pred cceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-c
Confidence 12456788899 99999888 9
Q ss_pred CcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEE
Q 047036 484 TYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIW 563 (634)
Q Consensus 484 ~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiW 563 (634)
+.|.+||+. +++.+..+..... | ..+.|+|+ | ...++++.++.|.+|
T Consensus 275 ~~v~~~d~~----~~~~~~~~~~~~~---~----------------~~~~~s~d--------g--~~l~~~~~~~~v~v~ 321 (349)
T 1jmx_B 275 NRLAKYDLK----QRKLIKAANLDHT---Y----------------YCVAFDKK--------G--DKLYLGGTFNDLAVF 321 (349)
T ss_dssp SEEEEEETT----TTEEEEEEECSSC---C----------------CEEEECSS--------S--SCEEEESBSSEEEEE
T ss_pred CeEEEEECc----cCeEEEEEcCCCC---c----------------cceEECCC--------C--CEEEEecCCCeEEEE
Confidence 999999975 4554433321100 0 12334433 2 245556678899999
Q ss_pred eChh
Q 047036 564 DFQQ 567 (634)
Q Consensus 564 dl~~ 567 (634)
|++.
T Consensus 322 d~~~ 325 (349)
T 1jmx_B 322 NPDT 325 (349)
T ss_dssp ETTT
T ss_pred eccc
Confidence 9863
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.52 E-value=1.7e-13 Score=152.30 Aligned_cols=150 Identities=10% Similarity=0.022 Sum_probs=104.5
Q ss_pred cccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCC---CcceeEEEEecCCCCCCCCCCCE
Q 047036 301 IGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKD---GTDITMRDITNDTKSSQLDPSES 377 (634)
Q Consensus 301 ~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~---~V~I~vvsfsPd~K~~q~~~g~~ 377 (634)
.+.+|+|++.++ ++ +.| ++|++||+.+|++...+.+|.. .| ..++|||| |+.
T Consensus 20 ~~~~~spdg~~~--------~~-~~d------g~i~~~d~~~g~~~~~~~~~~~~~~~v--~~~~~SpD--------g~~ 74 (723)
T 1xfd_A 20 PEAKWISDTEFI--------YR-EQK------GTVRLWNVETNTSTVLIEGKKIESLRA--IRYEISPD--------REY 74 (723)
T ss_dssp CCCCBSSSSCBC--------CC-CSS------SCEEEBCGGGCCCEEEECTTTTTTTTC--SEEEECTT--------SSE
T ss_pred cccEEcCCCcEE--------EE-eCC------CCEEEEECCCCcEEEEecccccccccc--ceEEECCC--------CCE
Confidence 566778776433 22 222 6899999999999999988874 24 35699999 678
Q ss_pred EEEEeCC---------CeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEE
Q 047036 378 TFLGLDD---------NRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLY 447 (634)
Q Consensus 378 laSGS~D---------~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLW 447 (634)
|++++.+ ++|++||+.++.. +.+..+. + ....+.++++|||| +||.++. ++|++|
T Consensus 75 l~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~--------~----~~~~~~~~~~SPdG~~la~~~~-~~i~~~ 139 (723)
T 1xfd_A 75 ALFSYNVEPIYQHSYTGYYVLSKIPHGDP--QSLDPPE--------V----SNAKLQYAGWGPKGQQLIFIFE-NNIYYC 139 (723)
T ss_dssp EEEEESCCCCSSSCCCSEEEEEESSSCCC--EECCCTT--------C----CSCCCSBCCBCSSTTCEEEEET-TEEEEE
T ss_pred EEEEecCccceeecceeeEEEEECCCCce--EeccCCc--------c----ccccccccEECCCCCEEEEEEC-CeEEEE
Confidence 9999875 7888999987653 3342111 1 11124567889999 7999887 899999
Q ss_pred eccccccccccccCCCCCe------------------EEEEECCCCCEEEE-EcC-CcEEEEEc
Q 047036 448 SKTSMRQAKTAFPGLGSPI------------------THVDVTYDGKWILG-TTD-TYLILICT 491 (634)
Q Consensus 448 D~~t~r~akt~L~GH~d~I------------------tsVdfSpDGk~LlS-S~D-~tIrLWD~ 491 (634)
|+.+++ ....+.++...| .+++|||||++||. +.| +.+++|++
T Consensus 140 ~~~~g~-~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~ 202 (723)
T 1xfd_A 140 AHVGKQ-AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMEL 202 (723)
T ss_dssp SSSSSC-CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred ECCCCc-eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEe
Confidence 998764 444444433333 78999999999998 544 34555543
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.52 E-value=8e-13 Score=131.78 Aligned_cols=132 Identities=14% Similarity=0.093 Sum_probs=96.2
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeC-CCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLD-DNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~-D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
++|++||+++|+++..+..+... . .++|+|+ ++.+++++. +++|++||+.++...+..+..+..
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~~~--~-~~~~s~d--------g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---- 84 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGYDF--V-DTAITSD--------CSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQS---- 84 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCCCE--E-EEEECSS--------SCEEEEEESTTCEEEEEECSSSSCEEEEEEECSS----
T ss_pred CeEEEEeCcccceeeeEEccCCc--c-eEEEcCC--------CCEEEEEeCCCCeEEEEECCCCceeEEecccCCC----
Confidence 69999999999999998876553 2 5599998 555555554 899999999876532444432222
Q ss_pred cccccccccCcceEEEEECCCC-eEEEEECCC---cEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE--EcCCc
Q 047036 412 WTQGHQFSRGTNFQCFASTGDG-SIVVGSLDG---KIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG--TTDTY 485 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~dG-~IASGS~DG---tIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS--S~D~t 485 (634)
+..+++++|+| +|+++..++ .|++||+.+++ ....++. +..+.+++|+|||++|++ ..++.
T Consensus 85 -----------~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~-~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 85 -----------SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK-FISTIPI-PYDAVGIAISPNGNGLILIDRSSAN 151 (331)
T ss_dssp -----------CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE-EEEEEEC-CTTEEEEEECTTSSCEEEEEETTTT
T ss_pred -----------CccceEECCCCCEEEEecCCCCcccEEEEECCCCC-eEEEEEC-CCCccceEECCCCCEEEEEecCCCc
Confidence 12337889999 677555553 89999998764 5556664 445699999999997765 44578
Q ss_pred -EEEEEcc
Q 047036 486 -LILICTL 492 (634)
Q Consensus 486 -IrLWD~~ 492 (634)
|.+|++.
T Consensus 152 ~i~~~~~~ 159 (331)
T 3u4y_A 152 TVRRFKID 159 (331)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 9999975
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.52 E-value=5.1e-13 Score=147.86 Aligned_cols=141 Identities=9% Similarity=0.098 Sum_probs=107.5
Q ss_pred cceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEc--CC
Q 047036 317 TNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDM--RD 394 (634)
Q Consensus 317 ~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~--R~ 394 (634)
+.+++++..+ ++|++||+.+|+++.++..+.. + ..++|+|| ++.+++++.|++|++||+ .+
T Consensus 149 ~~~~vs~~~d------~~V~v~D~~t~~~~~~i~~g~~-~--~~v~~spd--------g~~l~v~~~d~~V~v~D~~~~t 211 (543)
T 1nir_A 149 NLFSVTLRDA------GQIALVDGDSKKIVKVIDTGYA-V--HISRMSAS--------GRYLLVIGRDARIDMIDLWAKE 211 (543)
T ss_dssp GEEEEEEGGG------TEEEEEETTTCCEEEEEECSTT-E--EEEEECTT--------SCEEEEEETTSEEEEEETTSSS
T ss_pred CEEEEEEcCC------CeEEEEECCCceEEEEEecCcc-c--ceEEECCC--------CCEEEEECCCCeEEEEECcCCC
Confidence 3345555543 7999999999999999994433 3 46699999 679999999999999999 66
Q ss_pred CCceEEecccCCCCccccccccccccCcceEEEEECC----CC-eEEEEE-CCCcEEEEeccccccccccccC-------
Q 047036 395 RSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG----DG-SIVVGS-LDGKIRLYSKTSMRQAKTAFPG------- 461 (634)
Q Consensus 395 ~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~----dG-~IASGS-~DGtIRLWD~~t~r~akt~L~G------- 461 (634)
.. ++.++.. .....+++++| +| +|++++ .+++|+|||..+++ .+..++.
T Consensus 212 ~~-~~~~i~~----------------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~-~~~~i~~~g~~~~~ 273 (543)
T 1nir_A 212 PT-KVAEIKI----------------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE-PKQIVSTRGMTVDT 273 (543)
T ss_dssp CE-EEEEEEC----------------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC-EEEEEECCEECSSS
T ss_pred Cc-EEEEEec----------------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc-cceeecccCcccCc
Confidence 43 4555531 12346789999 88 788888 58999999998874 5555554
Q ss_pred ---CCC-CeEEEEECCCCCEEEE--EcCCcEEEEEcc
Q 047036 462 ---LGS-PITHVDVTYDGKWILG--TTDTYLILICTL 492 (634)
Q Consensus 462 ---H~d-~ItsVdfSpDGk~LlS--S~D~tIrLWD~~ 492 (634)
|.. .+.+|.+||+|..++. ..+++|.+||+.
T Consensus 274 ~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~ 310 (543)
T 1nir_A 274 QTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYK 310 (543)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECT
T ss_pred cccccCCceEEEEECCCCCEEEEEECCCCeEEEEEec
Confidence 223 7899999998877654 568999999975
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.51 E-value=2e-12 Score=129.08 Aligned_cols=150 Identities=17% Similarity=0.141 Sum_probs=108.3
Q ss_pred CCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCC-EEEEEeCCCeEEEEEcCCCCceEEecccCCCCcc
Q 047036 332 APGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSE-STFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVL 410 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~-~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~ 410 (634)
+++|++||+.+|++++++..+... ..++|+|+ ++ .++++..+++|.+||+.++. ++..+..+...
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~---~~~~~s~d--------g~~l~v~~~~~~~v~~~d~~~~~-~~~~~~~~~~~-- 133 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKP---FGATINNT--------TQTLWFGNTVNSAVTAIDAKTGE-VKGRLVLDDRK-- 133 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCC---CSEEEETT--------TTEEEEEETTTTEEEEEETTTCC-EEEEEESCCCC--
T ss_pred CccEEEEcCCCCeEEEEEecCCCc---ceEEECCC--------CCEEEEEecCCCEEEEEeCCCCe-eEEEEecCCCc--
Confidence 368999999999999999876542 23589998 45 55566668999999998865 34554322110
Q ss_pred ccccccccccCcceEEEEECCCC-eEEEEE--CCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcE
Q 047036 411 HWTQGHQFSRGTNFQCFASTGDG-SIVVGS--LDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYL 486 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~dG-~IASGS--~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tI 486 (634)
...+.......+++++++| +|++++ .++.|.+||..+++ ....++.++..+.+++|+|||++|++ +.++.|
T Consensus 134 ----~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i 208 (353)
T 3vgz_A 134 ----RTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIK-LKTAIQNTGKMSTGLALDSEGKRLYTTNADGEL 208 (353)
T ss_dssp ----CCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE-EEEEECCCCTTCCCCEEETTTTEEEEECTTSEE
T ss_pred ----cccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc-eEEEecCCCCccceEEECCCCCEEEEEcCCCeE
Confidence 0001111225678999998 676665 58999999998864 66677767777999999999999988 778999
Q ss_pred EEEEcccccCCCCeeeee
Q 047036 487 ILICTLFSDKDGKTKTGF 504 (634)
Q Consensus 487 rLWD~~~~~~~G~~~~gF 504 (634)
.+||+. +++.+..+
T Consensus 209 ~~~d~~----~~~~~~~~ 222 (353)
T 3vgz_A 209 ITIDTA----DNKILSRK 222 (353)
T ss_dssp EEEETT----TTEEEEEE
T ss_pred EEEECC----CCeEEEEE
Confidence 999975 45544433
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.51 E-value=6.6e-13 Score=131.06 Aligned_cols=153 Identities=13% Similarity=0.118 Sum_probs=107.1
Q ss_pred eEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCC--CcceeEEEEecCCCCCCCCCCCE-EEEEeCCCeEEEEEcCCC
Q 047036 319 MMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKD--GTDITMRDITNDTKSSQLDPSES-TFLGLDDNRLCQWDMRDR 395 (634)
Q Consensus 319 mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~--~V~I~vvsfsPd~K~~q~~~g~~-laSGS~D~tIklWD~R~~ 395 (634)
+|++++.+ ++|++||+.+|++++++..+.. .+ ..++|+|+ +.. +++++.++.|++||+.++
T Consensus 3 ~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~--~~~~~s~d--------g~~l~v~~~~~~~v~~~d~~~~ 66 (337)
T 1pby_B 3 YILAPARP------DKLVVIDTEKMAVDKVITIADAGPTP--MVPMVAPG--------GRIAYATVNKSESLVKIDLVTG 66 (337)
T ss_dssp EEEEEETT------TEEEEEETTTTEEEEEEECTTCTTCC--CCEEECTT--------SSEEEEEETTTTEEEEEETTTC
T ss_pred EEEEcCCC------CeEEEEECCCCcEEEEEEcCCCCCCc--cceEEcCC--------CCEEEEEeCCCCeEEEEECCCC
Confidence 45666554 6999999999999999874431 12 24589998 444 566677899999999876
Q ss_pred CceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEE------------CCCcEEEEeccccccccccccCC
Q 047036 396 SGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGS------------LDGKIRLYSKTSMRQAKTAFPGL 462 (634)
Q Consensus 396 ~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS------------~DGtIRLWD~~t~r~akt~L~GH 462 (634)
. .+..+..... ........+++++++| +|++++ .++.|++||+.+++ ....++.
T Consensus 67 ~-~~~~~~~~~~----------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-~~~~~~~- 133 (337)
T 1pby_B 67 E-TLGRIDLSTP----------EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-RRKAFEA- 133 (337)
T ss_dssp C-EEEEEECCBT----------TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-EEEEEEC-
T ss_pred C-eEeeEEcCCc----------ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc-EEEEEeC-
Confidence 5 3444421000 0001123467889999 788886 68999999998763 4455553
Q ss_pred CCCeEEEEECCCCCEEEEEcCCcEEEEEcccccCCCCeeeeec
Q 047036 463 GSPITHVDVTYDGKWILGTTDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 463 ~d~ItsVdfSpDGk~LlSS~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
+..+.+++|||||++|+.+ ++.|.+||+. .|+.+..+.
T Consensus 134 ~~~~~~~~~s~dg~~l~~~-~~~i~~~d~~----~~~~~~~~~ 171 (337)
T 1pby_B 134 PRQITMLAWARDGSKLYGL-GRDLHVMDPE----AGTLVEDKP 171 (337)
T ss_dssp CSSCCCEEECTTSSCEEEE-SSSEEEEETT----TTEEEEEEC
T ss_pred CCCcceeEECCCCCEEEEe-CCeEEEEECC----CCcEeeeee
Confidence 5568999999999998887 7899999975 465554444
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.51 E-value=4.7e-12 Score=125.24 Aligned_cols=177 Identities=11% Similarity=0.107 Sum_probs=111.2
Q ss_pred CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCC--CCc--EEEE
Q 047036 273 LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIE--TGK--IVTE 348 (634)
Q Consensus 273 ~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDle--TGK--~V~~ 348 (634)
..|.+|.....|-. . ....+.......+.+|+|+ +++|++++.++ ++|++||+. +|+ .+..
T Consensus 15 ~~v~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~spd--------g~~l~~~~~~~-----~~v~~~~~~~~~~~~~~~~~ 79 (343)
T 1ri6_A 15 QQIHVWNLNHEGAL-T-LTQVVDVPGQVQPMVVSPD--------KRYLYVGVRPE-----FRVLAYRIAPDDGALTFAAE 79 (343)
T ss_dssp TEEEEEEECTTSCE-E-EEEEEECSSCCCCEEECTT--------SSEEEEEETTT-----TEEEEEEECTTTCCEEEEEE
T ss_pred CeEEEEEECCCCcE-E-EeeeEecCCCCceEEECCC--------CCEEEEeecCC-----CeEEEEEecCCCCceeeccc
Confidence 57778876433310 0 1111211112244555554 44455554432 689999998 776 4566
Q ss_pred EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe-CCCeEEEEEcCCCC--ceEEecccCCCCccccccccccccCcceE
Q 047036 349 WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL-DDNRLCQWDMRDRS--GIVQNMVKGDSPVLHWTQGHQFSRGTNFQ 425 (634)
Q Consensus 349 lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS-~D~tIklWD~R~~~--~~Vq~l~gh~s~V~~~~~g~~y~~~~~fs 425 (634)
+..+. .+ ..++|+|+ ++.+++++ .+++|++||+..+. ..++.+.. .....
T Consensus 80 ~~~~~-~~--~~~~~s~d--------g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----------------~~~~~ 132 (343)
T 1ri6_A 80 SALPG-SL--THISTDHQ--------GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG----------------LDGCH 132 (343)
T ss_dssp EECSS-CC--SEEEECTT--------SSEEEEEETTTTEEEEEEEETTEEEEEEEEECC----------------CTTBC
T ss_pred cccCC-CC--cEEEEcCC--------CCEEEEEecCCCeEEEEECCCCccccccccccC----------------CCCce
Confidence 76655 33 45699998 56666555 58999999995221 22333321 11245
Q ss_pred EEEECCCC-eEEEEE-CCCcEEEEeccc-cccccc----ccc-CCCCCeEEEEECCCCCEEEE-E-cCCcEEEEEcc
Q 047036 426 CFASTGDG-SIVVGS-LDGKIRLYSKTS-MRQAKT----AFP-GLGSPITHVDVTYDGKWILG-T-TDTYLILICTL 492 (634)
Q Consensus 426 sva~s~dG-~IASGS-~DGtIRLWD~~t-~r~akt----~L~-GH~d~ItsVdfSpDGk~LlS-S-~D~tIrLWD~~ 492 (634)
+++++|+| +|++++ .++.|++||+.+ ++ ... .+. ..+..+.+++|+|||++|+. + .+++|.+||+.
T Consensus 133 ~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 133 SANISPDNRTLWVPALKQDRICLFTVSDDGH-LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp CCEECTTSSEEEEEEGGGTEEEEEEECTTSC-EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred EEEECCCCCEEEEecCCCCEEEEEEecCCCc-eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 67899999 688877 899999999875 32 211 122 24567899999999998876 4 68999999974
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.49 E-value=3.6e-13 Score=149.61 Aligned_cols=214 Identities=11% Similarity=0.077 Sum_probs=130.1
Q ss_pred EEEeee-CCCeEEEec--CeeeEEEccCCceecceeEEEecCCC----CCcccccCcceeeEEeCCcceEEecCCCCCC-
Q 047036 258 SLTLGA-LDNSFLVSD--LGLQVYRNYNRGIHNKGVSVRFDGGS----SKIGSNSTPKKALLMRGETNMMLMSPLKDGK- 329 (634)
Q Consensus 258 ~LavG~-~D~sfvv~G--~~igV~k~~~~gl~~~~~~~~~~~~~----~~~g~~fsP~~~mL~~~D~~mllsss~d~~~- 329 (634)
...+.+ +|++|++.+ .+|.+|....+. ....+.++. .+.+.+|+|++ ++|+++..+...
T Consensus 19 ~~~~~~spdg~~~~~~~dg~i~~~d~~~g~-----~~~~~~~~~~~~~~v~~~~~SpDg--------~~l~~~~~~~~~~ 85 (723)
T 1xfd_A 19 DPEAKWISDTEFIYREQKGTVRLWNVETNT-----STVLIEGKKIESLRAIRYEISPDR--------EYALFSYNVEPIY 85 (723)
T ss_dssp CCCCCBSSSSCBCCCCSSSCEEEBCGGGCC-----CEEEECTTTTTTTTCSEEEECTTS--------SEEEEEESCCCCS
T ss_pred ccccEEcCCCcEEEEeCCCCEEEEECCCCc-----EEEEeccccccccccceEEECCCC--------CEEEEEecCccce
Confidence 455666 777766653 367777654432 122233332 13455566655 444444432210
Q ss_pred --CCCCcEEEEeCCCCcEEEEEe---ccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEeccc
Q 047036 330 --PQAPGVQQLDIETGKIVTEWK---FEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVK 404 (634)
Q Consensus 330 --~~~~TIrlWDleTGK~V~~lk---gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~g 404 (634)
..+++|++||+.+|++ +.+. +|...| ..++|||| |+.||.++. +.|++||+.++.. ++....
T Consensus 86 ~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~--~~~~~SPd--------G~~la~~~~-~~i~~~~~~~g~~-~~~~~~ 152 (723)
T 1xfd_A 86 QHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKL--QYAGWGPK--------GQQLIFIFE-NNIYYCAHVGKQA-IRVVST 152 (723)
T ss_dssp SSCCCSEEEEEESSSCCC-EECCCTTCCSCCC--SBCCBCSS--------TTCEEEEET-TEEEEESSSSSCC-EEEECC
T ss_pred eecceeeEEEEECCCCce-EeccCCccccccc--cccEECCC--------CCEEEEEEC-CeEEEEECCCCce-EEEecC
Confidence 1136899999999986 4444 444334 34599999 668888886 7999999987653 333322
Q ss_pred CCCCcccccccc-ccc----cCcceEEEEECCCC-eEEEEECCC----------------------------------cE
Q 047036 405 GDSPVLHWTQGH-QFS----RGTNFQCFASTGDG-SIVVGSLDG----------------------------------KI 444 (634)
Q Consensus 405 h~s~V~~~~~g~-~y~----~~~~fssva~s~dG-~IASGS~DG----------------------------------tI 444 (634)
+...+.. .|+ +++ .-..+.+++++||| +||+++.|+ +|
T Consensus 153 ~~~~~~~--~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l 230 (723)
T 1xfd_A 153 GKEGVIY--NGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISL 230 (723)
T ss_dssp CBTTTEE--EEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEE
T ss_pred CCCCceE--CcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEE
Confidence 2211100 000 000 00123688999999 799988664 89
Q ss_pred EEEeccccccccccccCC------CCCeEEEEECCCCCEEEE-Ec----CCcEEEEEcccccCCCCeeeee
Q 047036 445 RLYSKTSMRQAKTAFPGL------GSPITHVDVTYDGKWILG-TT----DTYLILICTLFSDKDGKTKTGF 504 (634)
Q Consensus 445 RLWD~~t~r~akt~L~GH------~d~ItsVdfSpDGk~LlS-S~----D~tIrLWD~~~~~~~G~~~~gF 504 (634)
++||+.+++ ....|..| ...|.+++|||||++|++ +. +..|++||+. .|++...+
T Consensus 231 ~~~d~~~~~-~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~----~g~~~~~~ 296 (723)
T 1xfd_A 231 HVIGLNGPT-HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT----TGVCTKKH 296 (723)
T ss_dssp EEEESSSSC-CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETT----TCCEEEEE
T ss_pred EEEECCCCc-eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCC----CCcceEEE
Confidence 999998763 44455544 678999999999999977 43 2579999975 45554433
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.48 E-value=7e-13 Score=147.99 Aligned_cols=124 Identities=15% Similarity=0.070 Sum_probs=91.3
Q ss_pred cEEEEeCCCCcEEEEEeccCCC----------------------cceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEE
Q 047036 334 GVQQLDIETGKIVTEWKFEKDG----------------------TDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWD 391 (634)
Q Consensus 334 TIrlWDleTGK~V~~lkgH~~~----------------------V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD 391 (634)
+|++||+.+|+..+.+.+|... ..+..++|+|| |+.|++++. ++|++||
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpD--------g~~l~~~~~-~~i~~~d 135 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPD--------AQRLLFPLG-GELYLYD 135 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTT--------SSEEEEEET-TEEEEEE
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCC--------CCEEEEEeC-CcEEEEE
Confidence 8999999999998888776433 01234599999 678888887 9999999
Q ss_pred cCCCC--ceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCC---
Q 047036 392 MRDRS--GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSP--- 465 (634)
Q Consensus 392 ~R~~~--~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~--- 465 (634)
+.++. . +..+..|. ..+.+++++||| +||.++ ++.|++||+.+++ .......+...
T Consensus 136 ~~~~~~~~-~~~l~~~~---------------~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~-~~~~~~~~~~~~~~ 197 (741)
T 2ecf_A 136 LKQEGKAA-VRQLTHGE---------------GFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR-QMQLTADGSTTIGN 197 (741)
T ss_dssp SSSCSTTS-CCBCCCSS---------------SCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE-EEECCCCCCSSEEE
T ss_pred CCCCCcce-EEEcccCC---------------cccccccCCCCCCEEEEEe-CCcEEEEecCCCC-EEEeccCCccceec
Confidence 98762 2 23343222 236788999999 688887 5699999998763 44444444443
Q ss_pred -------------eEEEEECCCCCEEEE-EcCC
Q 047036 466 -------------ITHVDVTYDGKWILG-TTDT 484 (634)
Q Consensus 466 -------------ItsVdfSpDGk~LlS-S~D~ 484 (634)
+.+++|||||++|+. +.|+
T Consensus 198 g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 198 GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred cccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 478999999999998 6665
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.47 E-value=1.4e-12 Score=142.42 Aligned_cols=187 Identities=11% Similarity=0.067 Sum_probs=117.4
Q ss_pred EEEeee-CCCeEEEe----cCeeeEEEccCCceecceeEEEecCCC--CCcccccCcceeeEEeCCcceEEecCCCCCCC
Q 047036 258 SLTLGA-LDNSFLVS----DLGLQVYRNYNRGIHNKGVSVRFDGGS--SKIGSNSTPKKALLMRGETNMMLMSPLKDGKP 330 (634)
Q Consensus 258 ~LavG~-~D~sfvv~----G~~igV~k~~~~gl~~~~~~~~~~~~~--~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~ 330 (634)
+.++.+ +|+..|+- +.++.||.. .+| ....+..+. ...+.+|+|+ .+++..+. ++.++
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~-~~g-----~~~~lt~~~~~~~~~~~~spd-~~l~~~~~-----~~g~~--- 88 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLY-DGG-----ETVKLNREPINSVLDPHYGVG-RVILVRDV-----SKGAE--- 88 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEE-ETT-----EEEECCSSCCSEECEECTTCS-EEEEEEEC-----STTSC---
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEE-cCC-----CcEeeecccccccccccCCCC-eEEEEecc-----CCCCc---
Confidence 666666 88877763 457889986 333 223443332 3366778888 44432210 01111
Q ss_pred CCCcEEEEeC-CCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCc
Q 047036 331 QAPGVQQLDI-ETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPV 409 (634)
Q Consensus 331 ~~~TIrlWDl-eTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V 409 (634)
...|+.|++ ..|... .+..+.. + .+.+|+|+++ +..+++++.++++ +||+.++.. ..+..+
T Consensus 89 -~~~l~~~~~~~~g~~~-~l~~~~~-~--~~~~~s~dg~------~~~~~s~~~~~~~-l~d~~~g~~--~~l~~~---- 150 (582)
T 3o4h_A 89 -QHALFKVNTSRPGEEQ-RLEAVKP-M--RILSGVDTGE------AVVFTGATEDRVA-LYALDGGGL--RELARL---- 150 (582)
T ss_dssp -CEEEEEEETTSTTCCE-ECTTSCS-B--EEEEEEECSS------CEEEEEECSSCEE-EEEEETTEE--EEEEEE----
T ss_pred -ceEEEEEeccCCCccc-cccCCCC-c--eeeeeCCCCC------eEEEEecCCCCce-EEEccCCcE--EEeecC----
Confidence 124555666 124333 4443332 2 3558999854 2245555555555 999987642 233211
Q ss_pred cccccccccccCcceEEEEECCCC-eEEEEECC----CcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcC
Q 047036 410 LHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLD----GKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTD 483 (634)
Q Consensus 410 ~~~~~g~~y~~~~~fssva~s~dG-~IASGS~D----GtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D 483 (634)
+ ..+++++||| +||+++.| ++|++||+.+++ . ..|.+|...+.+++|||||++|++ ..+
T Consensus 151 ------~-------~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~-~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~ 215 (582)
T 3o4h_A 151 ------P-------GFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG-L-RVFDSGEGSFSSASISPGMKVTAGLETA 215 (582)
T ss_dssp ------S-------SCEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC-C-EEECCSSCEEEEEEECTTSCEEEEEECS
T ss_pred ------C-------CceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC-c-eEeecCCCccccceECCCCCEEEEccCC
Confidence 0 1467889999 78988888 889999988763 3 467889999999999999999998 667
Q ss_pred C--cEEEEEcc
Q 047036 484 T--YLILICTL 492 (634)
Q Consensus 484 ~--tIrLWD~~ 492 (634)
+ .|++||+.
T Consensus 216 ~~~~i~~~d~~ 226 (582)
T 3o4h_A 216 REARLVTVDPR 226 (582)
T ss_dssp SCEEEEEECTT
T ss_pred CeeEEEEEcCC
Confidence 7 89999975
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.45 E-value=5.3e-12 Score=125.50 Aligned_cols=155 Identities=12% Similarity=0.206 Sum_probs=103.4
Q ss_pred ceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCC-CcceeEEEEecCCCCCCCCCCCE-EEEEeCCCeEEEEEcCCC
Q 047036 318 NMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKD-GTDITMRDITNDTKSSQLDPSES-TFLGLDDNRLCQWDMRDR 395 (634)
Q Consensus 318 ~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~-~V~I~vvsfsPd~K~~q~~~g~~-laSGS~D~tIklWD~R~~ 395 (634)
.++++++.+ ++|++||+.+|++++++..+.. .+ ..++|+|+ ++. ++++..+++|.+||+.++
T Consensus 12 ~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~--~~~~~s~d--------g~~~~v~~~~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 12 EYMIVTNYP------NNLHVVDVASDTVYKSCVMPDKFGP--GTAMMAPD--------NRTAYVLNNHYGDIYGIDLDTC 75 (349)
T ss_dssp EEEEEEETT------TEEEEEETTTTEEEEEEECSSCCSS--CEEEECTT--------SSEEEEEETTTTEEEEEETTTT
T ss_pred EEEEEeCCC------CeEEEEECCCCcEEEEEecCCCCCC--ceeEECCC--------CCEEEEEeCCCCcEEEEeCCCC
Confidence 345555543 6999999999999999987651 22 34589998 454 456667899999999875
Q ss_pred CceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECC------------CcEEEEecccccc--cccccc
Q 047036 396 SGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLD------------GKIRLYSKTSMRQ--AKTAFP 460 (634)
Q Consensus 396 ~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~D------------GtIRLWD~~t~r~--akt~L~ 460 (634)
+ .+..+..+..+ . .......+++++|+| +|++++.+ +.|++||+.+++. ....+.
T Consensus 76 ~-~~~~~~~~~~~--------~-~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 145 (349)
T 1jmx_B 76 K-NTFHANLSSVP--------G-EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP 145 (349)
T ss_dssp E-EEEEEESCCST--------T-EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE
T ss_pred c-EEEEEEccccc--------c-cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc
Confidence 4 33443211000 0 001123567899999 78888866 9999999887431 112233
Q ss_pred CCCCCeEEEEECCCCCEEEEEcCCcEEEEEcccccCCCCeeeeec
Q 047036 461 GLGSPITHVDVTYDGKWILGTTDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 461 GH~d~ItsVdfSpDGk~LlSS~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
+...|.+++|+|||+ |+++ ++.|.+||+. +|+.+..+.
T Consensus 146 -~~~~~~~~~~s~dg~-l~~~-~~~i~~~d~~----~~~~~~~~~ 183 (349)
T 1jmx_B 146 -MPRQVYLMRAADDGS-LYVA-GPDIYKMDVK----TGKYTVALP 183 (349)
T ss_dssp -CCSSCCCEEECTTSC-EEEE-SSSEEEECTT----TCCEEEEEC
T ss_pred -CCCcccceeECCCCc-EEEc-cCcEEEEeCC----CCceecccc
Confidence 334689999999999 5552 3459999975 566666554
No 149
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.45 E-value=3.2e-13 Score=150.78 Aligned_cols=121 Identities=15% Similarity=0.160 Sum_probs=89.4
Q ss_pred CcEEEEeCCCCcEEEEEeccCC---CcceeEEEEecCCCCCCCCCCCEEEEEeC---------CCeEEEEEcCCCCceE-
Q 047036 333 PGVQQLDIETGKIVTEWKFEKD---GTDITMRDITNDTKSSQLDPSESTFLGLD---------DNRLCQWDMRDRSGIV- 399 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~---~V~I~vvsfsPd~K~~q~~~g~~laSGS~---------D~tIklWD~R~~~~~V- 399 (634)
++|++||+.+|++...+.+|.. .| ..++|||| |+.|++++. +++|++||+.++..+.
T Consensus 36 ~~i~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~SpD--------g~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~ 105 (719)
T 1z68_A 36 NNIVLYNIETGQSYTILSNRTMKSVNA--SNYGLSPD--------RQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG 105 (719)
T ss_dssp SCEEEEESSSCCEEEEECHHHHHTTTC--SEEEECTT--------SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS
T ss_pred CCEEEEEcCCCcEEEEEccccccccce--eeEEECCC--------CCeEEEEecCceeEEeecceEEEEEECCCCccccc
Confidence 6899999999999888887754 23 35599999 678888877 7999999998753200
Q ss_pred EecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccc-cccCCCCCe-----------
Q 047036 400 QNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKT-AFPGLGSPI----------- 466 (634)
Q Consensus 400 q~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt-~L~GH~d~I----------- 466 (634)
..+ ...+.++++|||| +||+++ |++|++||+.+++ ... +..++...|
T Consensus 106 ~~l------------------~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~-~~~l~~~~~~~~v~~g~~~~v~~e 165 (719)
T 1z68_A 106 NEL------------------PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDP-PFQITFNGRENKIFNGIPDWVYEE 165 (719)
T ss_dssp SCC------------------CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSC-CEECCCCCBTTTEEESSCCHHHHH
T ss_pred eec------------------CcccccceECCCCCEEEEEE-CCeEEEEeCCCCC-cEEEecCCCcCCeEcccccceeee
Confidence 111 1124668999999 788886 7899999998764 332 224444433
Q ss_pred ------EEEEECCCCCEEEE-EcC
Q 047036 467 ------THVDVTYDGKWILG-TTD 483 (634)
Q Consensus 467 ------tsVdfSpDGk~LlS-S~D 483 (634)
.+++|||||++||+ +.|
T Consensus 166 e~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 166 EMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp HTTCSSCCEEECTTSSEEEEEEEE
T ss_pred ecccCcccEEECCCCCEEEEEEEC
Confidence 48999999999998 655
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.45 E-value=3.1e-12 Score=142.81 Aligned_cols=167 Identities=11% Similarity=0.056 Sum_probs=110.3
Q ss_pred EeCCcceEEecCCCCCCCCCCcEEEEeCCCCc--EEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEE
Q 047036 313 MRGETNMMLMSPLKDGKPQAPGVQQLDIETGK--IVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQW 390 (634)
Q Consensus 313 ~~~D~~mllsss~d~~~~~~~TIrlWDleTGK--~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklW 390 (634)
+++|++.|+.++. ++|++||+.+|+ .++.+..|...+ ..++|+|| |+.|+.++ ++.|++|
T Consensus 116 ~SpDg~~l~~~~~-------~~i~~~d~~~~~~~~~~~l~~~~~~~--~~~~~SPD--------G~~la~~~-~~~i~~~ 177 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-------GELYLYDLKQEGKAAVRQLTHGEGFA--TDAKLSPK--------GGFVSFIR-GRNLWVI 177 (741)
T ss_dssp ECTTSSEEEEEET-------TEEEEEESSSCSTTSCCBCCCSSSCE--EEEEECTT--------SSEEEEEE-TTEEEEE
T ss_pred ECCCCCEEEEEeC-------CcEEEEECCCCCcceEEEcccCCccc--ccccCCCC--------CCEEEEEe-CCcEEEE
Confidence 3444455555543 479999999883 456677887765 45699999 67888887 4699999
Q ss_pred EcCCCCceEEecccCCCCcccccccc-ccc---cCcceEEEEECCCC-eEEEEECCC-----------------------
Q 047036 391 DMRDRSGIVQNMVKGDSPVLHWTQGH-QFS---RGTNFQCFASTGDG-SIVVGSLDG----------------------- 442 (634)
Q Consensus 391 D~R~~~~~Vq~l~gh~s~V~~~~~g~-~y~---~~~~fssva~s~dG-~IASGS~DG----------------------- 442 (634)
|+.++. ..+....+...+.. ++ .+. ....+.+++++||| +||+++.|+
T Consensus 178 d~~~g~-~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 178 DLASGR-QMQLTADGSTTIGN---GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp ETTTTE-EEECCCCCCSSEEE---SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred ecCCCC-EEEeccCCccceec---cccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 998753 22322222111100 00 000 00113567899999 799998876
Q ss_pred ----------cEEEEeccc-ccccccccc--CCCCCeEEEEECCCCCEEEE-Ec-----CCcEEEEEcccccCCCCeeee
Q 047036 443 ----------KIRLYSKTS-MRQAKTAFP--GLGSPITHVDVTYDGKWILG-TT-----DTYLILICTLFSDKDGKTKTG 503 (634)
Q Consensus 443 ----------tIRLWD~~t-~r~akt~L~--GH~d~ItsVdfSpDGk~LlS-S~-----D~tIrLWD~~~~~~~G~~~~g 503 (634)
.|++||+.+ ++ ...... +|...|.+++| |||++|+. +. +..|.+||+. +|++...
T Consensus 254 ~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~----~g~~~~~ 327 (741)
T 2ecf_A 254 PAAGDANVQVKLGVISPAEQAQ-TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLA----SNQQRVL 327 (741)
T ss_dssp CBTTSCCCEEEEEEECSSTTCC-CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETT----TCCEEEE
T ss_pred CCCCCCCCeeEEEEEECCCCCc-eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECC----CCceEEE
Confidence 899999887 64 333222 58889999999 99999997 43 5679999975 5665554
Q ss_pred ecCC
Q 047036 504 FSGR 507 (634)
Q Consensus 504 F~gh 507 (634)
+..+
T Consensus 328 ~~~~ 331 (741)
T 2ecf_A 328 AHET 331 (741)
T ss_dssp EEEE
T ss_pred EEcC
Confidence 4433
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.43 E-value=1.1e-11 Score=145.94 Aligned_cols=141 Identities=13% Similarity=0.118 Sum_probs=103.5
Q ss_pred CcEEEEeCCCCcEEEEEecc-----------CCCcceeEEEEe-cCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEE
Q 047036 333 PGVQQLDIETGKIVTEWKFE-----------KDGTDITMRDIT-NDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQ 400 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH-----------~~~V~I~vvsfs-Pd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq 400 (634)
++|++||++++++ ..+.++ ...| ..++|+ || |..|++++ ++.|++||+..+. +.
T Consensus 265 ~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v--~~~~~S~pd--------G~~la~~~-~~~i~~~~~~~~~--~~ 330 (1045)
T 1k32_A 265 GSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSK--FAEDFSPLD--------GDLIAFVS-RGQAFIQDVSGTY--VL 330 (1045)
T ss_dssp TEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGG--GEEEEEECG--------GGCEEEEE-TTEEEEECTTSSB--EE
T ss_pred CEEEEecCCceEe-eeeccCccccccccccccccc--ceeeecCCC--------CCEEEEEE-cCEEEEEcCCCCc--eE
Confidence 6899999965554 477763 3344 356999 99 56777777 8899999998653 23
Q ss_pred ecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEE-EEeccccccccccccCCCCCeEEEEECCCCCEE
Q 047036 401 NMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIR-LYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWI 478 (634)
Q Consensus 401 ~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIR-LWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~L 478 (634)
.+..|.. ..+.+++++ +| .|++++.++.|. +||+.+++ . ..+.+|...|.+++|||||++|
T Consensus 331 ~~~~~~~--------------~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~-~-~~l~~~~~~~~~~~~SpDG~~l 393 (1045)
T 1k32_A 331 KVPEPLR--------------IRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK-A-EKFEENLGNVFAMGVDRNGKFA 393 (1045)
T ss_dssp ECSCCSC--------------EEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC-E-EECCCCCCSEEEEEECTTSSEE
T ss_pred EccCCCc--------------ceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC-c-eEecCCccceeeeEECCCCCEE
Confidence 3432221 146788899 88 799999988888 99987642 3 3455888999999999999999
Q ss_pred EE-EcCCcEEEEEcccccCCCCeeeeecCCC
Q 047036 479 LG-TTDTYLILICTLFSDKDGKTKTGFSGRM 508 (634)
Q Consensus 479 lS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~ 508 (634)
++ +.++.|++||+. +|+....+.+|.
T Consensus 394 a~~~~~~~v~~~d~~----tg~~~~~~~~~~ 420 (1045)
T 1k32_A 394 VVANDRFEIMTVDLE----TGKPTVIERSRE 420 (1045)
T ss_dssp EEEETTSEEEEEETT----TCCEEEEEECSS
T ss_pred EEECCCCeEEEEECC----CCceEEeccCCC
Confidence 98 889999999975 455544443443
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.42 E-value=1.1e-10 Score=117.76 Aligned_cols=155 Identities=12% Similarity=0.217 Sum_probs=95.3
Q ss_pred EeCCcceEEecCCCCCCCCCCcEEEEeCC-CCc--EEEEEeccCCC-------cceeEEEEecCCCCCCCCCCCEEEEEe
Q 047036 313 MRGETNMMLMSPLKDGKPQAPGVQQLDIE-TGK--IVTEWKFEKDG-------TDITMRDITNDTKSSQLDPSESTFLGL 382 (634)
Q Consensus 313 ~~~D~~mllsss~d~~~~~~~TIrlWDle-TGK--~V~~lkgH~~~-------V~I~vvsfsPd~K~~q~~~g~~laSGS 382 (634)
+++|+++|+++...+ ++|++||+. +|+ .+..+...... ..+..++|+|+ +++++++.
T Consensus 93 ~spdg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd--------g~l~v~~~ 159 (347)
T 3hfq_A 93 VDEARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD--------NRLAVIDL 159 (347)
T ss_dssp EETTTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT--------SCEEEEET
T ss_pred ECCCCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCC--------CcEEEEeC
Confidence 345556555554332 789999995 343 34444322111 01244699999 56777778
Q ss_pred CCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEE-EECCCcEEEEeccc--cc-cccc
Q 047036 383 DDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVV-GSLDGKIRLYSKTS--MR-QAKT 457 (634)
Q Consensus 383 ~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IAS-GS~DGtIRLWD~~t--~r-~akt 457 (634)
.+++|++||+...+.+ ..+... ..........++++|+| +|++ +..++.|++|++.. ++ ....
T Consensus 160 ~~~~v~~~~~~~~g~~-~~~~~~-----------~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 227 (347)
T 3hfq_A 160 GSDKVYVYNVSDAGQL-SEQSVL-----------TMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLG 227 (347)
T ss_dssp TTTEEEEEEECTTSCE-EEEEEE-----------ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEEECCCCcE-EEeeeE-----------EcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEee
Confidence 8999999999843332 111100 00011224568999999 4655 56789999999763 21 0111
Q ss_pred cccCCC------CCeEEEEECCCCCEEE-E-EcCCcEEEEEcc
Q 047036 458 AFPGLG------SPITHVDVTYDGKWIL-G-TTDTYLILICTL 492 (634)
Q Consensus 458 ~L~GH~------d~ItsVdfSpDGk~Ll-S-S~D~tIrLWD~~ 492 (634)
.+..+. ..+.+|+|||||++|+ + ..+++|.+|++.
T Consensus 228 ~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 228 IVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred eeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 222222 4589999999999985 4 568999999975
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.42 E-value=6.5e-11 Score=119.50 Aligned_cols=157 Identities=8% Similarity=0.099 Sum_probs=101.8
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCC-CCcEEE--EEeccCC-CcceeEEEEecCCCCCCCCCCC-EEEEEeCCC
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIE-TGKIVT--EWKFEKD-GTDITMRDITNDTKSSQLDPSE-STFLGLDDN 385 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDle-TGK~V~--~lkgH~~-~V~I~vvsfsPd~K~~q~~~g~-~laSGS~D~ 385 (634)
+.+++++++++++..+ ++|++||+. +|++.. .+..+.. .+ .-++|+|| |+ +++++..++
T Consensus 146 ~~~spdg~l~v~~~~~------~~v~~~~~~~~g~~~~~~~~~~~~g~~p--~~~~~spd--------g~~l~v~~~~~~ 209 (347)
T 3hfq_A 146 TDLTPDNRLAVIDLGS------DKVYVYNVSDAGQLSEQSVLTMEAGFGP--RHLVFSPD--------GQYAFLAGELSS 209 (347)
T ss_dssp EEECTTSCEEEEETTT------TEEEEEEECTTSCEEEEEEEECCTTCCE--EEEEECTT--------SSEEEEEETTTT
T ss_pred EEECCCCcEEEEeCCC------CEEEEEEECCCCcEEEeeeEEcCCCCCC--ceEEECCC--------CCEEEEEeCCCC
Confidence 4455666644554433 689999998 676543 3333333 22 34599999 55 455567789
Q ss_pred eEEEEEcCCC-Cce--EEecccCCCCccccccccccccCcceEEEEECCCC-eE-EEEECCCcEEEEeccc-cc-ccccc
Q 047036 386 RLCQWDMRDR-SGI--VQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SI-VVGSLDGKIRLYSKTS-MR-QAKTA 458 (634)
Q Consensus 386 tIklWD~R~~-~~~--Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~I-ASGS~DGtIRLWD~~t-~r-~akt~ 458 (634)
+|++||+... +.+ ++.+..... .+.......+++++|+| +| +++..++.|++||+.. +. .....
T Consensus 210 ~v~v~~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~ 280 (347)
T 3hfq_A 210 QIASLKYDTQTGAFTQLGIVKTIPA---------DYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQ 280 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEESSCT---------TCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEE
T ss_pred EEEEEEecCCCCceEEeeeeeecCC---------CCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEE
Confidence 9999998752 221 222211100 01111346789999999 56 5567799999999862 11 23456
Q ss_pred ccCCCCCeEEEEECCCCCEEEE-Ec-CCcEEEEEcc
Q 047036 459 FPGLGSPITHVDVTYDGKWILG-TT-DTYLILICTL 492 (634)
Q Consensus 459 L~GH~d~ItsVdfSpDGk~LlS-S~-D~tIrLWD~~ 492 (634)
++.|+..+.+|+|||||++|++ +. ++.|.+|++.
T Consensus 281 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 281 ISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 6777888999999999999987 54 4899999653
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.41 E-value=8.2e-12 Score=138.80 Aligned_cols=204 Identities=9% Similarity=-0.000 Sum_probs=130.3
Q ss_pred cEEEeee-CCCeEEEe-cCeeeEEEccCCceecceeEEEecCC-CCCcccccCcceeeEEeCCcceEEecCCCCCCCCCC
Q 047036 257 QSLTLGA-LDNSFLVS-DLGLQVYRNYNRGIHNKGVSVRFDGG-SSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAP 333 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~-G~~igV~k~~~~gl~~~~~~~~~~~~-~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~ 333 (634)
...++.+ +|+.+++. +..|.+|....+. ...+..+ ......+|+|++. .|+.+. + +
T Consensus 83 ~v~~~~~spd~~~~~~~~~~i~~~d~~~~~------~~~l~~~~~~~~~~~~SpdG~--------~la~~~-~------~ 141 (706)
T 2z3z_A 83 PSFRTLDAGRGLVVLFTQGGLVGFDMLARK------VTYLFDTNEETASLDFSPVGD--------RVAYVR-N------H 141 (706)
T ss_dssp CCEEEEETTTTEEEEEETTEEEEEETTTTE------EEEEECCTTCCTTCEECTTSS--------EEEEEE-T------T
T ss_pred CceeEEECCCCeEEEEECCEEEEEECCCCc------eEEccCCcccccCCcCCCCCC--------EEEEEE-C------C
Confidence 3555666 77655554 4688888864432 2222222 2235566777654 344432 2 5
Q ss_pred cEEEEeCCC-----CcEEEEEeccCCCc------------ceeEEEEecCCCCCCCCCCCEEEEEe--------------
Q 047036 334 GVQQLDIET-----GKIVTEWKFEKDGT------------DITMRDITNDTKSSQLDPSESTFLGL-------------- 382 (634)
Q Consensus 334 TIrlWDleT-----GK~V~~lkgH~~~V------------~I~vvsfsPd~K~~q~~~g~~laSGS-------------- 382 (634)
+|++||+.+ |+.++....+...+ .+..++|+|| |+.|++++
T Consensus 142 ~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpD--------g~~la~~~~d~~~~~~~~~~~~ 213 (706)
T 2z3z_A 142 NLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPK--------GSCLAFYRMDQSMVKPTPIVDY 213 (706)
T ss_dssp EEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTT--------SSEEEEEEEECTTSCCEEEEEC
T ss_pred eEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCC--------CCEEEEEEECCCCCceEEeecc
Confidence 899999999 98877655554421 0134589999 67888887
Q ss_pred -------------------CCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCC
Q 047036 383 -------------------DDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDG 442 (634)
Q Consensus 383 -------------------~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DG 442 (634)
.+.+|++||+.++.. .....+. . ....+.+++++||| +||+++.++
T Consensus 214 ~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~---------~----~~~~~~~~~~spdg~~l~~~~~~~ 279 (706)
T 2z3z_A 214 HPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT-VYLQTGE---------P----KEKFLTNLSWSPDENILYVAEVNR 279 (706)
T ss_dssp CSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE-EECCCCS---------C----TTCEEEEEEECTTSSEEEEEEECT
T ss_pred CCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce-EeeccCC---------C----CceeEeeEEEECCCCEEEEEEeCC
Confidence 457899999987542 2221100 0 12236788999999 699988886
Q ss_pred -----cEEEEecccccccccccc-CCC---CCeEEEEECC--CCCEEEE-EcCCcEEEEEcccccCCCCeeeeecC
Q 047036 443 -----KIRLYSKTSMRQAKTAFP-GLG---SPITHVDVTY--DGKWILG-TTDTYLILICTLFSDKDGKTKTGFSG 506 (634)
Q Consensus 443 -----tIRLWD~~t~r~akt~L~-GH~---d~ItsVdfSp--DGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~g 506 (634)
+|++||+.+++.....+. .+. .++.+++||| ||++|++ +.|++++||.+. .+|+.+..+.+
T Consensus 280 ~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~---~~~~~~~~l~~ 352 (706)
T 2z3z_A 280 AQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD---TTGRLIRQVTK 352 (706)
T ss_dssp TSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE---TTSCEEEECCC
T ss_pred CCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEE---CCCCEEEecCC
Confidence 999999987622333332 222 2457899999 9999988 678999999864 24554444443
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.41 E-value=2e-11 Score=135.77 Aligned_cols=143 Identities=8% Similarity=0.003 Sum_probs=97.6
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCC-----CCceEEecccCCC
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRD-----RSGIVQNMVKGDS 407 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~-----~~~~Vq~l~gh~s 407 (634)
++|++||+.+|++.. +..|...+ ..++|+|| |+.|+++ .|++|++||+.+ +.. .+....+..
T Consensus 101 ~~i~~~d~~~~~~~~-l~~~~~~~--~~~~~Spd--------G~~la~~-~~~~i~v~~~~~~~~~~g~~-~~~~~~~~~ 167 (706)
T 2z3z_A 101 GGLVGFDMLARKVTY-LFDTNEET--ASLDFSPV--------GDRVAYV-RNHNLYIARGGKLGEGMSRA-IAVTIDGTE 167 (706)
T ss_dssp TEEEEEETTTTEEEE-EECCTTCC--TTCEECTT--------SSEEEEE-ETTEEEEEECBCTTSCCCCC-EESCSCCBT
T ss_pred CEEEEEECCCCceEE-ccCCcccc--cCCcCCCC--------CCEEEEE-ECCeEEEEecCcccccCCCc-EEeccCCCC
Confidence 589999999987655 44455544 34599999 6678884 789999999987 543 232221111
Q ss_pred Ccccccccc-ccc-cCcceEEEEECCCC-eEEEEE---------------------------------CCCcEEEEeccc
Q 047036 408 PVLHWTQGH-QFS-RGTNFQCFASTGDG-SIVVGS---------------------------------LDGKIRLYSKTS 451 (634)
Q Consensus 408 ~V~~~~~g~-~y~-~~~~fssva~s~dG-~IASGS---------------------------------~DGtIRLWD~~t 451 (634)
.+. .|. .|. ....+.+++++||| +||+++ .++.|++||+.+
T Consensus 168 ~~~---~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~ 244 (706)
T 2z3z_A 168 TLV---YGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLAT 244 (706)
T ss_dssp TEE---ESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTT
T ss_pred CeE---cccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCC
Confidence 100 000 000 00113678899999 799988 457899999987
Q ss_pred cccccccc--cCCCCCeEEEEECCCCCEEEE-EcCC-----cEEEEEcc
Q 047036 452 MRQAKTAF--PGLGSPITHVDVTYDGKWILG-TTDT-----YLILICTL 492 (634)
Q Consensus 452 ~r~akt~L--~GH~d~ItsVdfSpDGk~LlS-S~D~-----tIrLWD~~ 492 (634)
++ ..... .+|...|.+++|||||++|++ +.+. .|++||+.
T Consensus 245 ~~-~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~ 292 (706)
T 2z3z_A 245 GK-TVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAE 292 (706)
T ss_dssp TE-EEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETT
T ss_pred Cc-eEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECC
Confidence 64 33322 257788999999999999998 7775 89999975
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.40 E-value=2.3e-12 Score=143.77 Aligned_cols=201 Identities=8% Similarity=0.024 Sum_probs=119.7
Q ss_pred EEEeee-CCCeEEEec--CeeeEEEccCCceecceeEEEecCCC----CCcccccCcceeeEEeCCcceEEecCCCCC--
Q 047036 258 SLTLGA-LDNSFLVSD--LGLQVYRNYNRGIHNKGVSVRFDGGS----SKIGSNSTPKKALLMRGETNMMLMSPLKDG-- 328 (634)
Q Consensus 258 ~LavG~-~D~sfvv~G--~~igV~k~~~~gl~~~~~~~~~~~~~----~~~g~~fsP~~~mL~~~D~~mllsss~d~~-- 328 (634)
...+.+ +|+.|++.+ ..|.+|....+. ....+.++. .....+|+|++. +|+.++...+
T Consensus 18 ~~~~~~s~dg~~~~~~~d~~i~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~SpDg~--------~la~~~~~~~~~ 84 (719)
T 1z68_A 18 TFFPNWISGQEYLHQSADNNIVLYNIETGQ-----SYTILSNRTMKSVNASNYGLSPDRQ--------FVYLESDYSKLW 84 (719)
T ss_dssp CCCCEESSSSEEEEECTTSCEEEEESSSCC-----EEEEECHHHHHTTTCSEEEECTTSS--------EEEEEEEEEECS
T ss_pred CCccEECCCCeEEEEcCCCCEEEEEcCCCc-----EEEEEccccccccceeeEEECCCCC--------eEEEEecCceeE
Confidence 345556 777777654 467777754432 111122211 124555666654 4444332100
Q ss_pred -CCCCCcEEEEeCCCCcEE--EEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEec-cc
Q 047036 329 -KPQAPGVQQLDIETGKIV--TEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNM-VK 404 (634)
Q Consensus 329 -~~~~~TIrlWDleTGK~V--~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l-~g 404 (634)
-..+++|++||+.+|+++ ..+. ..+ ..++|||| |+.||.++ |++|++||+.++.. ++.. .+
T Consensus 85 ~~s~~~~i~~~d~~~g~~~~~~~l~---~~~--~~~~~SPD--------G~~la~~~-~~~i~~~~~~~g~~-~~l~~~~ 149 (719)
T 1z68_A 85 RYSYTATYYIYDLSNGEFVRGNELP---RPI--QYLCWSPV--------GSKLAYVY-QNNIYLKQRPGDPP-FQITFNG 149 (719)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCCC---SSB--CCEEECSS--------TTCEEEEE-TTEEEEESSTTSCC-EECCCCC
T ss_pred EeecceEEEEEECCCCccccceecC---ccc--ccceECCC--------CCEEEEEE-CCeEEEEeCCCCCc-EEEecCC
Confidence 001268999999999874 3332 233 34599999 56788875 78999999987654 2222 22
Q ss_pred CCCCcccccccc-cccc----CcceEEEEECCCC-eEEEEECCC----------------------------------cE
Q 047036 405 GDSPVLHWTQGH-QFSR----GTNFQCFASTGDG-SIVVGSLDG----------------------------------KI 444 (634)
Q Consensus 405 h~s~V~~~~~g~-~y~~----~~~fssva~s~dG-~IASGS~DG----------------------------------tI 444 (634)
+...|. .|+ ++.. -....+++++||| +||+++.|. +|
T Consensus 150 ~~~~v~---~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l 226 (719)
T 1z68_A 150 RENKIF---NGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRI 226 (719)
T ss_dssp BTTTEE---ESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEE
T ss_pred CcCCeE---cccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEE
Confidence 222111 011 0000 0112478999999 799998763 89
Q ss_pred EEEecccccccc--------ccccCCCCCeEEEEECCCCCEEEE-EcCC----cEEEEE
Q 047036 445 RLYSKTSMRQAK--------TAFPGLGSPITHVDVTYDGKWILG-TTDT----YLILIC 490 (634)
Q Consensus 445 RLWD~~t~r~ak--------t~L~GH~d~ItsVdfSpDGk~LlS-S~D~----tIrLWD 490 (634)
++||+.+++ .+ ..+.+|...|.+++|||||+++++ +... .|.+||
T Consensus 227 ~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 227 FIIDTTYPA-YVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp EEEESSCHH-HHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred EEEECCCCC-ccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 999998763 32 234579999999999999987776 3222 388888
No 157
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.38 E-value=2.5e-10 Score=112.39 Aligned_cols=197 Identities=10% Similarity=0.167 Sum_probs=129.8
Q ss_pred cCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEecc-CCCcceeEEEEecCCCCCCCCCCCEEEEEeC
Q 047036 305 STPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFE-KDGTDITMRDITNDTKSSQLDPSESTFLGLD 383 (634)
Q Consensus 305 fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH-~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~ 383 (634)
..|..+.+...++++++++...+ +.|++|| .+|+.+.++... ...+ .-++++|+ +.++++.+.
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~-----~~i~~~d-~~g~~~~~~~~~~~~~~--~~i~~~~~--------g~l~v~~~~ 140 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPT-----HQIQIYN-QYGQFVRKFGATILQHP--RGVTVDNK--------GRIIVVECK 140 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGG-----CEEEEEC-TTSCEEEEECTTTCSCE--EEEEECTT--------SCEEEEETT
T ss_pred cCceEEEEEcCCCeEEEEcCCCC-----CEEEEEC-CCCcEEEEecCccCCCc--eEEEEeCC--------CCEEEEECC
Confidence 45665554356777777764311 5899999 679999888543 2332 34588887 677888888
Q ss_pred CCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeE-EEEECCCcEEEEeccccccccccccC-
Q 047036 384 DNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSI-VVGSLDGKIRLYSKTSMRQAKTAFPG- 461 (634)
Q Consensus 384 D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~I-ASGS~DGtIRLWD~~t~r~akt~L~G- 461 (634)
++.|++||+.. ..+..+... . ......+++++++|.| ++.+.++.|++||..+ + ....+..
T Consensus 141 ~~~i~~~~~~g--~~~~~~~~~-~------------~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~-~~~~~~~~ 203 (286)
T 1q7f_A 141 VMRVIIFDQNG--NVLHKFGCS-K------------HLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-Q-YLRQIGGE 203 (286)
T ss_dssp TTEEEEECTTS--CEEEEEECT-T------------TCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-C-EEEEESCT
T ss_pred CCEEEEEcCCC--CEEEEeCCC-C------------ccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-C-EEEEEccC
Confidence 99999999753 334444210 0 1113578899999965 5556789999999754 2 3444543
Q ss_pred -CCCCeEEEEECCCCCEEEE-EcCC-cEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCccccccc
Q 047036 462 -LGSPITHVDVTYDGKWILG-TTDT-YLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGH 538 (634)
Q Consensus 462 -H~d~ItsVdfSpDGk~LlS-S~D~-tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~ 538 (634)
+...+.+|+|+|||+.+++ ..++ .|.+||. +|+.+..+..+... +.|+ .+.|.+.
T Consensus 204 g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-----~g~~~~~~~~~~~~--~~~~--------------~i~~~~~- 261 (286)
T 1q7f_A 204 GITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-----DGQLISALESKVKH--AQCF--------------DVALMDD- 261 (286)
T ss_dssp TTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-----TSCEEEEEEESSCC--SCEE--------------EEEEETT-
T ss_pred CccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-----CCCEEEEEcccCCC--Ccce--------------eEEECCC-
Confidence 3467899999999998888 5565 9999994 57666666544321 0111 1333332
Q ss_pred ccccccCCCCceEEEEEcCCeEEEEeCh
Q 047036 539 FSWVTENGKQERHLVATVGKFSVIWDFQ 566 (634)
Q Consensus 539 Fs~~t~~g~~E~~IvtStg~~viiWdl~ 566 (634)
| +.+|++.++.|.+|++.
T Consensus 262 -------g---~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 262 -------G---SVVLASKDYRLYIYRYV 279 (286)
T ss_dssp -------T---EEEEEETTTEEEEEECS
T ss_pred -------C---cEEEECCCCeEEEEEcc
Confidence 3 56777789999999875
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.37 E-value=1.2e-10 Score=118.43 Aligned_cols=150 Identities=10% Similarity=0.118 Sum_probs=94.9
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEe---ccCC-Cc--------ceeEEEEecCCCCCCCCCCCEE-EEEe
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWK---FEKD-GT--------DITMRDITNDTKSSQLDPSEST-FLGL 382 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lk---gH~~-~V--------~I~vvsfsPd~K~~q~~~g~~l-aSGS 382 (634)
++++|+.+...+ ++|.+||+.++..+..+. .|.. .. .+..++|+|+ ++.+ +++.
T Consensus 108 dg~~l~~~~~~~-----~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spd--------g~~l~~~~~ 174 (361)
T 3scy_A 108 NGKNIVTANYSG-----GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPD--------GKYLLADDL 174 (361)
T ss_dssp CSSEEEEEETTT-----TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTT--------SSEEEEEET
T ss_pred CCCEEEEEECCC-----CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCC--------CCEEEEEeC
Confidence 556555554432 799999997644332221 1111 00 0133599999 5544 5555
Q ss_pred CCCeEEEEEcCCCCc------eEE-----ecccCCCCccccccccccccCcceEEEEECCCC-eEEEEE-CCCcEEEEec
Q 047036 383 DDNRLCQWDMRDRSG------IVQ-----NMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGS-LDGKIRLYSK 449 (634)
Q Consensus 383 ~D~tIklWD~R~~~~------~Vq-----~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS-~DGtIRLWD~ 449 (634)
.+++|++|++..... +.. .+. ........+++++|+| +|++++ .++.|++||+
T Consensus 175 ~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 240 (361)
T 3scy_A 175 GTDQIHKFNINPNANADNKEKFLTKGTPEAFK--------------VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRY 240 (361)
T ss_dssp TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE--------------CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEE
T ss_pred CCCEEEEEEEcCCCCcccccceeeccccccee--------------cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEe
Confidence 689999999875432 111 110 0012234678999999 577776 6999999998
Q ss_pred ccccc----ccccccCCCCCeEEEEECCCCCEEEE-Ec--CCcEEEEEcc
Q 047036 450 TSMRQ----AKTAFPGLGSPITHVDVTYDGKWILG-TT--DTYLILICTL 492 (634)
Q Consensus 450 ~t~r~----akt~L~GH~d~ItsVdfSpDGk~LlS-S~--D~tIrLWD~~ 492 (634)
.+++. ....++++...+.+|+|||||++|++ .. +++|.+|++.
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 241 ADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp ETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred cCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 75421 12234566677899999999999976 44 4899999974
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.37 E-value=6.9e-10 Score=114.41 Aligned_cols=187 Identities=15% Similarity=0.159 Sum_probs=112.2
Q ss_pred CcEEEEeCC-CCcEEEEEec----cCCCcceeEEEEecCCCCCCCCCCCEEEEEe-CCCeEEEEEcC-CCCc-eEEeccc
Q 047036 333 PGVQQLDIE-TGKIVTEWKF----EKDGTDITMRDITNDTKSSQLDPSESTFLGL-DDNRLCQWDMR-DRSG-IVQNMVK 404 (634)
Q Consensus 333 ~TIrlWDle-TGK~V~~lkg----H~~~V~I~vvsfsPd~K~~q~~~g~~laSGS-~D~tIklWD~R-~~~~-~Vq~l~g 404 (634)
+++++|++. .|++...+.. +...+ ..++|+|| |+.++++. .+++|++||+. ++.. .+..+..
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~spd--------G~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~ 188 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGI--HGMVFDPT--------ETYLYSADLTANKLWTHRKLASGEVELVGSVDA 188 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCE--EEEEECTT--------SSEEEEEETTTTEEEEEEECTTSCEEEEEEEEC
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcc--eEEEECCC--------CCEEEEEcCCCCEEEEEEECCCCCEEEeeeEec
Confidence 789999997 5887766553 33333 45699999 56677655 47899999997 5432 1122210
Q ss_pred CCCCccccccccccccCcceEEEEECCCC-eEEEEEC-CCcEEEEecc--cccc-----cccccc----CCCC------C
Q 047036 405 GDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSL-DGKIRLYSKT--SMRQ-----AKTAFP----GLGS------P 465 (634)
Q Consensus 405 h~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~-DGtIRLWD~~--t~r~-----akt~L~----GH~d------~ 465 (634)
. ........++++|+| +|++++. +++|++|+.. +++. ....++ +|.. .
T Consensus 189 ~-------------~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 255 (365)
T 1jof_A 189 P-------------DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLY 255 (365)
T ss_dssp S-------------STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSE
T ss_pred C-------------CCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccc
Confidence 0 001235678999999 6777764 7899999754 3321 112343 2333 5
Q ss_pred eEEEE-ECCCCCEEEE-Ec-CC-----cEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCCccccCCCcccccc
Q 047036 466 ITHVD-VTYDGKWILG-TT-DT-----YLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGG 537 (634)
Q Consensus 466 ItsVd-fSpDGk~LlS-S~-D~-----tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a 537 (634)
+.+|+ |||||++|++ .. .+ +|.+|++. .+|+.... +.+.+.+. .....+.|+|.
T Consensus 256 ~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~---~~g~~~~~--------------~~~~~~~~-~~~~~~a~sp~ 317 (365)
T 1jof_A 256 RADVCALTFSGKYMFASSRANKFELQGYIAGFKLR---DCGSIEKQ--------------LFLSPTPT-SGGHSNAVSPC 317 (365)
T ss_dssp EEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC---TTSCEEEE--------------EEEEECSS-CCTTCCCEEEC
T ss_pred cccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC---CCCCEEEe--------------eeeeecCC-CCcccceecCC
Confidence 89999 9999999876 33 33 89999974 13443210 00000000 01134677776
Q ss_pred cccccccCCCCceEEEEEc-CCeEEEEeChh
Q 047036 538 HFSWVTENGKQERHLVATV-GKFSVIWDFQQ 567 (634)
Q Consensus 538 ~Fs~~t~~g~~E~~IvtSt-g~~viiWdl~~ 567 (634)
.|+ | ...++++. ++.|.||++..
T Consensus 318 ~~d-----g--~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 318 PWS-----D--EWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp TTC-----T--TEEEEECSSSCEEEEEEEET
T ss_pred CcC-----C--CEEEEEEcCCCeEEEEEEch
Confidence 551 3 23444544 48899998863
No 160
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.36 E-value=7.3e-12 Score=147.41 Aligned_cols=145 Identities=9% Similarity=-0.005 Sum_probs=110.4
Q ss_pred eEEe-CCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCC-CcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEE
Q 047036 311 LLMR-GETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKD-GTDITMRDITNDTKSSQLDPSESTFLGLDDNRLC 388 (634)
Q Consensus 311 mL~~-~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~-~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIk 388 (634)
+.++ +|++.|+..+. ++|++||+.+|+..+ +..|.. .+ ..++|+ | |+.+++++.++.|.
T Consensus 301 ~~~S~pdG~~la~~~~-------~~i~~~~~~~~~~~~-~~~~~~~~~--~~~~~s-d--------g~~l~~~s~~~~l~ 361 (1045)
T 1k32_A 301 EDFSPLDGDLIAFVSR-------GQAFIQDVSGTYVLK-VPEPLRIRY--VRRGGD-T--------KVAFIHGTREGDFL 361 (1045)
T ss_dssp EEEEECGGGCEEEEET-------TEEEEECTTSSBEEE-CSCCSCEEE--EEECSS-S--------EEEEEEEETTEEEE
T ss_pred eeecCCCCCEEEEEEc-------CEEEEEcCCCCceEE-ccCCCcceE--EeeeEc-C--------CCeEEEEECCCceE
Confidence 3344 55555555542 589999999888654 677765 43 455888 7 57899999999999
Q ss_pred -EEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCe
Q 047036 389 -QWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPI 466 (634)
Q Consensus 389 -lWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~I 466 (634)
+||+..+. +..+.+|. ..+.+++++|+| +||+++.+++|++||+.+++ .+..+.+|..+|
T Consensus 362 ~~~d~~~~~--~~~l~~~~---------------~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~-~~~~~~~~~~~v 423 (1045)
T 1k32_A 362 GIYDYRTGK--AEKFEENL---------------GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK-PTVIERSREAMI 423 (1045)
T ss_dssp EEEETTTCC--EEECCCCC---------------CSEEEEEECTTSSEEEEEETTSEEEEEETTTCC-EEEEEECSSSCC
T ss_pred EEEECCCCC--ceEecCCc---------------cceeeeEECCCCCEEEEECCCCeEEEEECCCCc-eEEeccCCCCCc
Confidence 99998653 23443222 246788999999 79999999999999998864 666677899999
Q ss_pred EEEEECCCCCEEEE-EcCC----------cEEEEEcc
Q 047036 467 THVDVTYDGKWILG-TTDT----------YLILICTL 492 (634)
Q Consensus 467 tsVdfSpDGk~LlS-S~D~----------tIrLWD~~ 492 (634)
.+++|||||++||+ +.+. +|+|||+.
T Consensus 424 ~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 424 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred cceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 99999999999998 5544 89999975
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.35 E-value=6.8e-12 Score=136.96 Aligned_cols=126 Identities=6% Similarity=-0.102 Sum_probs=100.1
Q ss_pred cEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC----CeEEEEEcCCCCceEEecccCCCCc
Q 047036 334 GVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD----NRLCQWDMRDRSGIVQNMVKGDSPV 409 (634)
Q Consensus 334 TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D----~tIklWD~R~~~~~Vq~l~gh~s~V 409 (634)
.+.+||+.+|++.+....+.. . .+|+|| |+.|++++.| .+|++||+.++.. +.|.+|..
T Consensus 133 ~~~l~d~~~g~~~~l~~~~~~----~-~~~spD--------G~~la~~~~~~~~~~~i~~~d~~~g~~--~~l~~~~~-- 195 (582)
T 3o4h_A 133 RVALYALDGGGLRELARLPGF----G-FVSDIR--------GDLIAGLGFFGGGRVSLFTSNLSSGGL--RVFDSGEG-- 195 (582)
T ss_dssp CEEEEEEETTEEEEEEEESSC----E-EEEEEE--------TTEEEEEEEEETTEEEEEEEETTTCCC--EEECCSSC--
T ss_pred CceEEEccCCcEEEeecCCCc----e-EEECCC--------CCEEEEEEEcCCCCeEEEEEcCCCCCc--eEeecCCC--
Confidence 456999999987766655541 3 489999 6789988888 8899999987653 34543322
Q ss_pred cccccccccccCcceEEEEECCCC-eEEEEECCC--cEEEEeccccccccccccCCCCCeEEEE--------ECCCCCEE
Q 047036 410 LHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDG--KIRLYSKTSMRQAKTAFPGLGSPITHVD--------VTYDGKWI 478 (634)
Q Consensus 410 ~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DG--tIRLWD~~t~r~akt~L~GH~d~ItsVd--------fSpDGk~L 478 (634)
.+.+++++||| +||+++.+| .|++||+.+++ .. .+.+|...|.+++ |||||+.+
T Consensus 196 -------------~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 260 (582)
T 3o4h_A 196 -------------SFSSASISPGMKVTAGLETAREARLVTVDPRDGS-VE-DLELPSKDFSSYRPTAITWLGYLPDGRLA 260 (582)
T ss_dssp -------------EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC-EE-ECCCSCSHHHHHCCSEEEEEEECTTSCEE
T ss_pred -------------ccccceECCCCCEEEEccCCCeeEEEEEcCCCCc-EE-EccCCCcChhhhhhccccceeEcCCCcEE
Confidence 24778999999 689888999 99999998864 55 7888888888888 99999777
Q ss_pred EE-EcCCcEEEEEc
Q 047036 479 LG-TTDTYLILICT 491 (634)
Q Consensus 479 lS-S~D~tIrLWD~ 491 (634)
++ +.|++++||++
T Consensus 261 ~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 261 VVARREGRSAVFID 274 (582)
T ss_dssp EEEEETTEEEEEET
T ss_pred EEEEcCCcEEEEEE
Confidence 77 88999999995
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.32 E-value=2.9e-10 Score=117.26 Aligned_cols=150 Identities=9% Similarity=0.085 Sum_probs=97.1
Q ss_pred eCCcceEEecCCCCCCCCCCcEEEEeCC-CCcEEEEEeccC-CCcceeEEEEecCCCCCCCCCCCE--EEEEe-------
Q 047036 314 RGETNMMLMSPLKDGKPQAPGVQQLDIE-TGKIVTEWKFEK-DGTDITMRDITNDTKSSQLDPSES--TFLGL------- 382 (634)
Q Consensus 314 ~~D~~mllsss~d~~~~~~~TIrlWDle-TGK~V~~lkgH~-~~V~I~vvsfsPd~K~~q~~~g~~--laSGS------- 382 (634)
++|+++|+++.. .+|++||+. +|+++....... +.+ ..++|+|+ |+. ++++.
T Consensus 48 spdg~~l~~~~~-------~~v~~~~~~~~g~~~~~~~~~~~g~~--~~~~~spd--------g~~l~~~~~~~~~~~~~ 110 (365)
T 1jof_A 48 DHERKNIYGAAM-------KKWSSFAVKSPTEIVHEASHPIGGHP--RANDADTN--------TRAIFLLAAKQPPYAVY 110 (365)
T ss_dssp CTTSSEEEEEEB-------TEEEEEEEEETTEEEEEEEEECCSSG--GGGCTTSC--------CEEEEEEECSSTTCCEE
T ss_pred CCCCCEEEEEcc-------ceEEEEEECCCCCEEEeeEeecCCCC--ccEEECCC--------CCEEEEEEecCCcceec
Confidence 444455554443 279999997 898876543211 122 23488998 453 45553
Q ss_pred ------CCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEE-CCCcEEEEecc-ccc
Q 047036 383 ------DDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGS-LDGKIRLYSKT-SMR 453 (634)
Q Consensus 383 ------~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS-~DGtIRLWD~~-t~r 453 (634)
.++++.+|++...+.+...+... .+.......+++++|+| +|++++ .++.|++||+. +++
T Consensus 111 ~~~~~~~~g~v~v~~~~~~g~~~~~~~~~-----------~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~ 179 (365)
T 1jof_A 111 ANPFYKFAGYGNVFSVSETGKLEKNVQNY-----------EYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE 179 (365)
T ss_dssp EEEESSSCCEEEEEEECTTCCEEEEEEEE-----------ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC
T ss_pred cceeecCCceEEEEccCCCCcCcceEeeE-----------EeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCC
Confidence 69999999997533333222100 00012345788999999 677765 47899999987 543
Q ss_pred ccc--ccc--cCCCCCeEEEEECCCCCEEEE-Ec-CCcEEEEEcc
Q 047036 454 QAK--TAF--PGLGSPITHVDVTYDGKWILG-TT-DTYLILICTL 492 (634)
Q Consensus 454 ~ak--t~L--~GH~d~ItsVdfSpDGk~LlS-S~-D~tIrLWD~~ 492 (634)
.. ..+ +.|+..+.+++|||||++|++ +. +++|.+|+..
T Consensus 180 -~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 180 -VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp -EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred -EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 21 223 346778999999999999987 43 7899999864
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.29 E-value=6.4e-11 Score=134.26 Aligned_cols=134 Identities=12% Similarity=0.072 Sum_probs=96.6
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCc-ceeE--EEEecCCCCCCCCCCCEEEEEeCCC---------eEEEEEcCCCCceEE
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGT-DITM--RDITNDTKSSQLDPSESTFLGLDDN---------RLCQWDMRDRSGIVQ 400 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V-~I~v--vsfsPd~K~~q~~~g~~laSGS~D~---------tIklWD~R~~~~~Vq 400 (634)
++|++||+.+|++...+.+|...+ .+.. .+|||| |+.|+.++.++ .+.+||+.++.. .
T Consensus 36 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spd--------g~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~--~ 105 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPD--------GQFILLEYNYVKQWRHSYTASYDIYDLNKRQL--I 105 (740)
T ss_dssp TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTT--------SSEEEEEEEEEECSSSCEEEEEEEEETTTTEE--C
T ss_pred CcEEEEECCCCceEEEEechhhhhhcccccceEECCC--------CCEEEEEECCeeeEEEccceEEEEEECCCCcE--E
Confidence 689999999999999999987542 1112 578999 67899998874 456999998642 3
Q ss_pred ecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCe-------------
Q 047036 401 NMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPI------------- 466 (634)
Q Consensus 401 ~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~I------------- 466 (634)
.+..|. ..+..+++|||| +||.++ |+.|++||+.+++....+..|+...|
T Consensus 106 ~l~~~~---------------~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 106 TEERIP---------------NNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp CSSCCC---------------TTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred EcccCC---------------CcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 343222 135678999999 688885 68999999987642222344554444
Q ss_pred ----EEEEECCCCCEEEE-EcCCc-EEEEEcc
Q 047036 467 ----THVDVTYDGKWILG-TTDTY-LILICTL 492 (634)
Q Consensus 467 ----tsVdfSpDGk~LlS-S~D~t-IrLWD~~ 492 (634)
.++.|||||++||. +.|.+ +.+|++.
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~ 201 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYS 201 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEE
Confidence 34999999999998 66544 8888764
No 164
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.28 E-value=2.3e-09 Score=108.99 Aligned_cols=154 Identities=10% Similarity=0.115 Sum_probs=95.5
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCc-------EE-----EEEe-ccCCCcceeEEEEecCCCCCCCCCCCE
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGK-------IV-----TEWK-FEKDGTDITMRDITNDTKSSQLDPSES 377 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK-------~V-----~~lk-gH~~~V~I~vvsfsPd~K~~q~~~g~~ 377 (634)
+.++++++.|+.+...+ ++|++|++..+. +. ..+. .+...+ ..++|+|| |+.
T Consensus 160 ~~~spdg~~l~~~~~~~-----~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~spd--------g~~ 224 (361)
T 3scy_A 160 VRITPDGKYLLADDLGT-----DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGP--RHLIFNSD--------GKF 224 (361)
T ss_dssp EEECTTSSEEEEEETTT-----TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCE--EEEEECTT--------SSE
T ss_pred EEECCCCCEEEEEeCCC-----CEEEEEEEcCCCCcccccceeecccccceecCCCCCC--eEEEEcCC--------CCE
Confidence 44455666444433322 589999876533 21 1222 222232 34699999 566
Q ss_pred EEEEe-CCCeEEEEEcCCCCc-eEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEEC--CCcEEEEecc--
Q 047036 378 TFLGL-DDNRLCQWDMRDRSG-IVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSL--DGKIRLYSKT-- 450 (634)
Q Consensus 378 laSGS-~D~tIklWD~R~~~~-~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~--DGtIRLWD~~-- 450 (634)
+++++ .+++|.+||++++.. .++.+..... ......+++++|+| +|++++. ++.|++|++.
T Consensus 225 l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~------------~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~ 292 (361)
T 3scy_A 225 AYLINEIGGTVIAFRYADGMLDEIQTVAADTV------------NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET 292 (361)
T ss_dssp EEEEETTTCEEEEEEEETTEEEEEEEEESCSS------------CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT
T ss_pred EEEEcCCCCeEEEEEecCCceEEeEEEecCCC------------CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC
Confidence 76666 699999999985421 1222211000 01123688999999 6766655 4899999984
Q ss_pred ccc-cccccccCCCCCeEEEEECCCCCEEEE-E-cCCcEEEEEcc
Q 047036 451 SMR-QAKTAFPGLGSPITHVDVTYDGKWILG-T-TDTYLILICTL 492 (634)
Q Consensus 451 t~r-~akt~L~GH~d~ItsVdfSpDGk~LlS-S-~D~tIrLWD~~ 492 (634)
+++ .....++. +..+.+|+|||||++|++ + .++.|.+|.+.
T Consensus 293 ~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 293 NGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp TCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 222 12334554 677899999999999988 4 47899997653
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.23 E-value=3.5e-10 Score=128.23 Aligned_cols=208 Identities=9% Similarity=0.049 Sum_probs=123.9
Q ss_pred cEEEeee-CCCeEEEec-CeeeEEEccCCceecceeEEEecCCCC-Ccc-----cccCcceeeEEeCCcceEEecCCCCC
Q 047036 257 QSLTLGA-LDNSFLVSD-LGLQVYRNYNRGIHNKGVSVRFDGGSS-KIG-----SNSTPKKALLMRGETNMMLMSPLKDG 328 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G-~~igV~k~~~~gl~~~~~~~~~~~~~~-~~g-----~~fsP~~~mL~~~D~~mllsss~d~~ 328 (634)
+...+.+ +|+.+++.+ .+|.+|....+. ....+.++.. ... ..|+|++ +.|+.+..+..
T Consensus 18 ~~~~~~w~~dg~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Spdg--------~~l~~~~~~~~ 84 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQENNILVFNAEYGN-----SSVFLENSTFDEFGHSINDYSISPDG--------QFILLEYNYVK 84 (740)
T ss_dssp CCCCEEECSSSEEEEEETTEEEEEETTTCC-----EEEEECTTTTTTCCSCCCEEEECTTS--------SEEEEEEEEEE
T ss_pred cccccEECCCCcEEEEcCCcEEEEECCCCc-----eEEEEechhhhhhcccccceEECCCC--------CEEEEEECCee
Confidence 3556777 888888865 578888765543 1222444321 111 2345554 44444443210
Q ss_pred C---CCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccC
Q 047036 329 K---PQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKG 405 (634)
Q Consensus 329 ~---~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh 405 (634)
. ...+.+++||+++|++. .+.+|...+ ...+|||| |+.||.+ .|+.|++||+.++....-+..++
T Consensus 85 ~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~--~~~~~SPd--------G~~la~~-~~~~i~~~~~~~~~~~~lt~~g~ 152 (740)
T 4a5s_A 85 QWRHSYTASYDIYDLNKRQLI-TEERIPNNT--QWVTWSPV--------GHKLAYV-WNNDIYVKIEPNLPSYRITWTGK 152 (740)
T ss_dssp CSSSCEEEEEEEEETTTTEEC-CSSCCCTTE--EEEEECSS--------TTCEEEE-ETTEEEEESSTTSCCEECCSCCB
T ss_pred eEEEccceEEEEEECCCCcEE-EcccCCCcc--eeeEECCC--------CCEEEEE-ECCeEEEEECCCCceEEEcCCCC
Confidence 0 00135789999999865 477777654 45699999 5678877 47899999998765321112222
Q ss_pred CCCcccccccc-ccccC----cceEEEEECCCC-eEEEEECCC------------------------------------c
Q 047036 406 DSPVLHWTQGH-QFSRG----TNFQCFASTGDG-SIVVGSLDG------------------------------------K 443 (634)
Q Consensus 406 ~s~V~~~~~g~-~y~~~----~~fssva~s~dG-~IASGS~DG------------------------------------t 443 (634)
...+. .|+ +++.. ....++++|||| +||.++.|. +
T Consensus 153 ~~~~~---~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~ 229 (740)
T 4a5s_A 153 EDIIY---NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVK 229 (740)
T ss_dssp TTTEE---ESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEE
T ss_pred cccee---cCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeE
Confidence 21110 010 00000 112457899999 799887543 4
Q ss_pred EEEEeccc---ccc-cccccc------CCCCCeEEEEECCCCCEEEE-Ec----CCcEEEEEcc
Q 047036 444 IRLYSKTS---MRQ-AKTAFP------GLGSPITHVDVTYDGKWILG-TT----DTYLILICTL 492 (634)
Q Consensus 444 IRLWD~~t---~r~-akt~L~------GH~d~ItsVdfSpDGk~LlS-S~----D~tIrLWD~~ 492 (634)
|+|||+.+ +.. ....+. +|...|..++|||||++|+. .. +..|++||+.
T Consensus 230 l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~ 293 (740)
T 4a5s_A 230 FFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYD 293 (740)
T ss_dssp EEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEE
T ss_pred EEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECC
Confidence 88899877 520 111222 48888999999999998776 33 2369999986
No 166
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.22 E-value=3.1e-09 Score=105.44 Aligned_cols=146 Identities=8% Similarity=-0.053 Sum_probs=96.5
Q ss_pred eCCcc-eEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEc
Q 047036 314 RGETN-MMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDM 392 (634)
Q Consensus 314 ~~D~~-mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~ 392 (634)
+++++ +++++..+ +.|++||+.+| ++.|..+...+ ..++++|+ +.++++...++.|.+||+
T Consensus 36 d~~g~~l~~~~~~~------~~i~~~~~~~~--~~~~~~~~~~~--~~l~~~~d--------g~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 36 VPARSAVIFSDVRQ------NRTWAWSDDGQ--LSPEMHPSHHQ--NGHCLNKQ--------GHLIACSHGLRRLERQRE 97 (296)
T ss_dssp EGGGTEEEEEEGGG------TEEEEEETTSC--EEEEESSCSSE--EEEEECTT--------CCEEEEETTTTEEEEECS
T ss_pred eCCCCEEEEEeCCC------CEEEEEECCCC--eEEEECCCCCc--ceeeECCC--------CcEEEEecCCCeEEEEcC
Confidence 44455 45555443 68999999987 78888777654 45688988 667777777899999999
Q ss_pred CCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEE-----EEC-------------CCcEEEEecccccc
Q 047036 393 RDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVV-----GSL-------------DGKIRLYSKTSMRQ 454 (634)
Q Consensus 393 R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IAS-----GS~-------------DGtIRLWD~~t~r~ 454 (634)
.++.. ..+..... + .....+..++++++|.|.+ |+. .+.|..||.. ++
T Consensus 98 ~~g~~--~~~~~~~~-------~---~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~- 163 (296)
T 3e5z_A 98 PGGEW--ESIADSFE-------G---KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT- 163 (296)
T ss_dssp TTCCE--EEEECEET-------T---EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-
T ss_pred CCCcE--EEEeeccC-------C---CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-
Confidence 77642 22211000 0 0112235678899996544 331 3456666654 22
Q ss_pred ccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcc
Q 047036 455 AKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTL 492 (634)
Q Consensus 455 akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~ 492 (634)
...+.++.....+|+|+|||++|++ +.++.|.+||+.
T Consensus 164 -~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 164 -LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp -EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred -EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 2334556667899999999999977 678999999974
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.18 E-value=1.6e-09 Score=110.27 Aligned_cols=133 Identities=9% Similarity=0.021 Sum_probs=89.0
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEE----------------------EeCCCeEEEE
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFL----------------------GLDDNRLCQW 390 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laS----------------------GS~D~tIklW 390 (634)
++|++||+.+|+....+..|...+......++|+ +..++. +..+..|++|
T Consensus 102 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~d--------g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 102 RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSD--------CTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTT--------SSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred CeEEEEECCCCcceeeeechhhcccccceeECCC--------CCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 5899999999998888887776432111134777 455553 2345789999
Q ss_pred EcCCCCceEEecccCCCCccccccccccccCcceEEEEECC-CC-eEEEEECC------CcEEEEeccccccccccccCC
Q 047036 391 DMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DG-SIVVGSLD------GKIRLYSKTSMRQAKTAFPGL 462 (634)
Q Consensus 391 D~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG-~IASGS~D------GtIRLWD~~t~r~akt~L~GH 462 (634)
|+.++.. ..+..+ ...+..++++| +| +||.++.+ ..|.+||..+. ....|..+
T Consensus 174 d~~~g~~--~~l~~~---------------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~ 234 (388)
T 3pe7_A 174 DLKTGES--TVILQE---------------NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT--NMRKVKTH 234 (388)
T ss_dssp ETTTCCE--EEEEEE---------------SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC--CCEESCCC
T ss_pred ECCCCce--EEeecC---------------CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC--ceEEeeeC
Confidence 9987642 333221 12356788999 88 68877764 37888887664 23344444
Q ss_pred C--CCeEEEEECCCCCEEEE-EcC--C---cEEEEEcc
Q 047036 463 G--SPITHVDVTYDGKWILG-TTD--T---YLILICTL 492 (634)
Q Consensus 463 ~--d~ItsVdfSpDGk~LlS-S~D--~---tIrLWD~~ 492 (634)
. ..+.+++|||||++|+. +.+ . .|.+||+.
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (388)
T 3pe7_A 235 AEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPE 272 (388)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTT
T ss_pred CCCcccccceECCCCCEEEEEecCCCCCcceEEEEecC
Confidence 4 36889999999998876 442 2 39999975
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.16 E-value=4.1e-09 Score=107.42 Aligned_cols=166 Identities=10% Similarity=0.010 Sum_probs=107.4
Q ss_pred CcEEEEeCCCCcEEEEEe-ccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 333 PGVQQLDIETGKIVTEWK-FEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lk-gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
++|++||..+|++++.+. ++-..+ .-++|+|+ |+++++.+.+++|++||+......+..+.....+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p--~gia~d~~--------g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~--- 135 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLP--HGLSIDTD--------GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQP--- 135 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSE--EEEEECTT--------SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBC---
T ss_pred CcEEEEECCCCeEEeccCCCccCCc--eEEEECCC--------CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCC---
Confidence 479999999999998876 333332 34588988 6788899999999999986532133444211000
Q ss_pred cccccccccCcceEEEEECC-CCeEEE-EE-CCCcEEEEeccccccccccccCC----------CCCeEEEEECCC-CCE
Q 047036 412 WTQGHQFSRGTNFQCFASTG-DGSIVV-GS-LDGKIRLYSKTSMRQAKTAFPGL----------GSPITHVDVTYD-GKW 477 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~-dG~IAS-GS-~DGtIRLWD~~t~r~akt~L~GH----------~d~ItsVdfSpD-Gk~ 477 (634)
+..-..-..-..+++++ +|.|++ .+ .++.|++||..+ + ....+... -....+|+|+|+ |+.
T Consensus 136 ---g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g-~-~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l 210 (329)
T 3fvz_A 136 ---GSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG-K-FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL 210 (329)
T ss_dssp ---CCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS-C-EEEEECEECCSSSCCTTEESCEEEEEEETTTTEE
T ss_pred ---CCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC-C-EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEE
Confidence 00000111346789998 786544 44 599999999654 3 44555322 234899999999 777
Q ss_pred EEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecC
Q 047036 478 ILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTP 522 (634)
Q Consensus 478 LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~P 522 (634)
+++ +.++.|++||.. +|+.+..+..... ...|+.+...|
T Consensus 211 ~v~d~~~~~I~~~~~~----~G~~~~~~~~~~~--~~~~~~~~~~p 250 (329)
T 3fvz_A 211 CVADRENGRIQCFKTD----TKEFVREIKHASF--GRNVFAISYIP 250 (329)
T ss_dssp EEEETTTTEEEEEETT----TCCEEEEECCTTT--TTCEEEEEEET
T ss_pred EEEECCCCEEEEEECC----CCcEEEEEecccc--CCCcceeeecC
Confidence 777 778999999964 4777776653321 12344444455
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.06 E-value=3.5e-08 Score=96.94 Aligned_cols=148 Identities=9% Similarity=0.117 Sum_probs=102.1
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEe--ccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEE
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWK--FEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLC 388 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lk--gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIk 388 (634)
+..+.++++++++..+ +.|++||.. |+.+..+. ++...+ .-++++|+ ++++++.+.+++|+
T Consensus 126 i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~~~~~~~~~p--~~i~~~~~--------g~l~v~~~~~~~i~ 188 (286)
T 1q7f_A 126 VTVDNKGRIIVVECKV------MRVIIFDQN-GNVLHKFGCSKHLEFP--NGVVVNDK--------QEIFISDNRAHCVK 188 (286)
T ss_dssp EEECTTSCEEEEETTT------TEEEEECTT-SCEEEEEECTTTCSSE--EEEEECSS--------SEEEEEEGGGTEEE
T ss_pred EEEeCCCCEEEEECCC------CEEEEEcCC-CCEEEEeCCCCccCCc--EEEEECCC--------CCEEEEECCCCEEE
Confidence 4445666777766543 589999964 88888885 333333 34588887 56777878899999
Q ss_pred EEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeE-EEEECCC-cEEEEeccccccccccccCCC--C
Q 047036 389 QWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSI-VVGSLDG-KIRLYSKTSMRQAKTAFPGLG--S 464 (634)
Q Consensus 389 lWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~I-ASGS~DG-tIRLWD~~t~r~akt~L~GH~--d 464 (634)
+||+.. ..+..+..+. + -....+++++++|.| ++.+.++ .|++||..+ + ....+..+. .
T Consensus 189 ~~~~~g--~~~~~~~~~g---------~----~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~-~~~~~~~~~~~~ 251 (286)
T 1q7f_A 189 VFNYEG--QYLRQIGGEG---------I----TNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-Q-LISALESKVKHA 251 (286)
T ss_dssp EEETTC--CEEEEESCTT---------T----SCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-C-EEEEEEESSCCS
T ss_pred EEcCCC--CEEEEEccCC---------c----cCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-C-EEEEEcccCCCC
Confidence 999853 2344443211 0 023467899999964 5555565 999999754 3 444454433 3
Q ss_pred CeEEEEECCCCCEEEEEcCCcEEEEEcc
Q 047036 465 PITHVDVTYDGKWILGTTDTYLILICTL 492 (634)
Q Consensus 465 ~ItsVdfSpDGk~LlSS~D~tIrLWD~~ 492 (634)
.+.+|+|+|||+.++++.|++|++|+..
T Consensus 252 ~~~~i~~~~~g~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 252 QCFDVALMDDGSVVLASKDYRLYIYRYV 279 (286)
T ss_dssp CEEEEEEETTTEEEEEETTTEEEEEECS
T ss_pred cceeEEECCCCcEEEECCCCeEEEEEcc
Confidence 4789999999998888779999999964
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.06 E-value=3.6e-09 Score=107.67 Aligned_cols=132 Identities=13% Similarity=0.004 Sum_probs=91.7
Q ss_pred cEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccc
Q 047036 334 GVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWT 413 (634)
Q Consensus 334 TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~ 413 (634)
.|++||+.+|++.+...+|...+ ....|+|| ++.|+.++.++.|++||+.++... ..+..+...
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~--~~~~~spd--------g~~l~~~~~~~~l~~~d~~~g~~~-~~~~~~~~~----- 124 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNT--FGGFLSPD--------DDALFYVKDGRNLMRVDLATLEEN-VVYQVPAEW----- 124 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCS--SSCEECTT--------SSEEEEEETTTEEEEEETTTCCEE-EEEECCTTE-----
T ss_pred eEEEEeCCCCceEEeeeCCCCCc--cceEEcCC--------CCEEEEEeCCCeEEEEECCCCcce-eeeechhhc-----
Confidence 69999999999988887776643 12489999 678999999999999999986532 222211110
Q ss_pred cccccccCcceEEEEECCCCe-EEE----------------------EECCCcEEEEeccccccccccccCCCCCeEEEE
Q 047036 414 QGHQFSRGTNFQCFASTGDGS-IVV----------------------GSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVD 470 (634)
Q Consensus 414 ~g~~y~~~~~fssva~s~dG~-IAS----------------------GS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVd 470 (634)
........+++|. |+. ++.++.|++||+.+++ ...+..+...+.+++
T Consensus 125 --------~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~~~~~~~~~~ 194 (388)
T 3pe7_A 125 --------VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--STVILQENQWLGHPI 194 (388)
T ss_dssp --------EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--EEEEEEESSCEEEEE
T ss_pred --------ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--eEEeecCCccccccE
Confidence 0012234588884 442 2345789999998763 344556777899999
Q ss_pred ECC-CCCEEEE-EcC------CcEEEEEc
Q 047036 471 VTY-DGKWILG-TTD------TYLILICT 491 (634)
Q Consensus 471 fSp-DGk~LlS-S~D------~tIrLWD~ 491 (634)
||| ||++|+. +.+ ..|.++|+
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~ 223 (388)
T 3pe7_A 195 YRPYDDSTVAFCHEGPHDLVDARMWLINE 223 (388)
T ss_dssp EETTEEEEEEEEECSCTTTSSCSEEEEET
T ss_pred ECCCCCCEEEEEEecCCCCCcceEEEEeC
Confidence 999 9999987 542 36666664
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.03 E-value=3.1e-09 Score=117.19 Aligned_cols=144 Identities=10% Similarity=0.074 Sum_probs=96.3
Q ss_pred CCcce-EEecCCCCCCCCCCcEEEEeCC--C-CcEEEEEec-----cCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC-
Q 047036 315 GETNM-MLMSPLKDGKPQAPGVQQLDIE--T-GKIVTEWKF-----EKDGTDITMRDITNDTKSSQLDPSESTFLGLDD- 384 (634)
Q Consensus 315 ~D~~m-llsss~d~~~~~~~TIrlWDle--T-GK~V~~lkg-----H~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D- 384 (634)
+|++. |+.+.... ..|++||+. + |+ .+.+.. |...+ ...+|+|| |+.|++++.|
T Consensus 88 PDg~~~la~~~~~~-----~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~--~~~~~spD--------g~~l~~~~~~~ 151 (662)
T 3azo_A 88 PAGGPLLVFTHFGD-----QRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRW--ADPVLLPE--------RGEVWCMAEEF 151 (662)
T ss_dssp SSSSCEEEEEBTTT-----CCEEEECTTSTTCCC-CEECSCCCCSTTCEEE--EEEEEETT--------TTEEEEEEEEE
T ss_pred cCCCeEEEEEECCC-----CeEEEEcCCCCCCCC-CEeccCCccCCCCccc--cCcEECCC--------CCEEEEEEecc
Confidence 55555 55444322 579999987 3 54 556666 54433 45699999 6789888887
Q ss_pred ---------CeEEEEEcCCC-----CceEEecc-cCCCCccccccccccccCcceEEEEECCCC-eEEEEECCC------
Q 047036 385 ---------NRLCQWDMRDR-----SGIVQNMV-KGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDG------ 442 (634)
Q Consensus 385 ---------~tIklWD~R~~-----~~~Vq~l~-gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DG------ 442 (634)
.+|++||+.+. +.+ +.+. .+. ..+.++++|||| +||.++.++
T Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~---------------~~~~~~~~SpDG~~la~~~~~~~~~~~~ 215 (662)
T 3azo_A 152 TGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAH---------------RFVTGPRLSPDGRQAVWLAWDHPRMPWE 215 (662)
T ss_dssp CSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCS---------------SEECCCEECTTSSEEEEEEECTTCCTTT
T ss_pred cCCCCCCceeEEEEEECCCCccccCCce-eEEEecCC---------------CcccCceECCCCCEEEEEECCCCCCCCC
Confidence 69999999862 222 3342 211 123456889999 798888654
Q ss_pred --cEEEEecc-cc--ccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEE
Q 047036 443 --KIRLYSKT-SM--RQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILIC 490 (634)
Q Consensus 443 --tIRLWD~~-t~--r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD 490 (634)
+|++||+. ++ ......+.+|...+.+++|||||+++++ ..+++..||-
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~ 269 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHR 269 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEE
T ss_pred CcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEE
Confidence 79999987 44 1244455567889999999999996666 5567444443
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.00 E-value=7.4e-08 Score=100.39 Aligned_cols=185 Identities=11% Similarity=0.138 Sum_probs=112.5
Q ss_pred EeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEE-EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEE
Q 047036 313 MRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTE-WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWD 391 (634)
Q Consensus 313 ~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~-lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD 391 (634)
.++|++.|+.+... .+++|.+||+.+++++.+ +..... ..+.+.|++ ...+++.+.|+++.+|+
T Consensus 115 ~spdg~~l~v~n~~----~~~~v~v~d~~~~~~~~~~i~~~~~----~~v~~~p~~-------~~~~~~~~~dg~~~~v~ 179 (361)
T 2oiz_A 115 QTTDGKFIVLQNAS----PATSIGIVDVAKGDYVEDVTAAAGC----WSVIPQPNR-------PRSFMTICGDGGLLTIN 179 (361)
T ss_dssp ECTTSSEEEEEEES----SSEEEEEEETTTTEEEEEEGGGTTE----EEEEECTTS-------SSEEEEEETTSSEEEEE
T ss_pred ECCCCCEEEEECCC----CCCeEEEEECCCCcEEEEEecCCCc----ceeEEcCCC-------CeeEEEECCCCcEEEEE
Confidence 34555555544321 025899999999999998 654321 113567763 25778888999999998
Q ss_pred cCCCCceEEe------cccCCCCccccc------------cccccccC---------------------cc-----eEEE
Q 047036 392 MRDRSGIVQN------MVKGDSPVLHWT------------QGHQFSRG---------------------TN-----FQCF 427 (634)
Q Consensus 392 ~R~~~~~Vq~------l~gh~s~V~~~~------------~g~~y~~~---------------------~~-----fssv 427 (634)
....+.++.. +..+..++.... .+.-+... .. ...+
T Consensus 180 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 180 LGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp ECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred ECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEE
Confidence 8653332211 100000100000 00000000 00 0015
Q ss_pred EECCCC-eEEEEEC-----------CCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEEEcCCcEEEEEccccc
Q 047036 428 ASTGDG-SIVVGSL-----------DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFSD 495 (634)
Q Consensus 428 a~s~dG-~IASGS~-----------DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlSS~D~tIrLWD~~~~~ 495 (634)
+++++| +|+++.. .++|.+||..+++ ...+++.+. +.+|+|||||++|+++.+++|.+||+.
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~-~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~--- 333 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ-RVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDIS--- 333 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE-EEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECS---
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc-EEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECC---
Confidence 788886 6665543 3589999999874 677788776 899999999999998666999999985
Q ss_pred CCC--CeeeeecCCCCCCCCCceeEeecCC
Q 047036 496 KDG--KTKTGFSGRMGNKIPAPRLLKLTPL 523 (634)
Q Consensus 496 ~~G--~~~~gF~gh~~~~~p~pr~L~L~Pe 523 (634)
+| +.+..+..+ + ..|+-+.+.|.
T Consensus 334 -t~~l~~~~~i~~~-G---~~P~~~~~~p~ 358 (361)
T 2oiz_A 334 -QPEPKLLRTIEGA-A---EASLQVQFHPV 358 (361)
T ss_dssp -SSSCEEEEEETTS-C---SSEEEEEECCC
T ss_pred -CCcceeeEEeccC-C---CCcEEEEecCC
Confidence 57 665554322 2 45777777775
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.98 E-value=4.6e-08 Score=99.63 Aligned_cols=170 Identities=13% Similarity=0.068 Sum_probs=108.7
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCc--EEEEEe---------ccCCCcceeEEEEec-CCCCCCCC
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGK--IVTEWK---------FEKDGTDITMRDITN-DTKSSQLD 373 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK--~V~~lk---------gH~~~V~I~vvsfsP-d~K~~q~~ 373 (634)
.|.++ ..+.++++++++..+ ++|++||.. |+ .+.++. ++-..+ .-++|+| +
T Consensus 92 ~p~gi-a~d~~g~l~v~d~~~------~~v~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~~P--~~ia~~~~~------- 154 (329)
T 3fvz_A 92 LPHGL-SIDTDGNYWVTDVAL------HQVFKLDPH-SKEGPLLILGRSMQPGSDQNHFCQP--TDVAVEPST------- 154 (329)
T ss_dssp SEEEE-EECTTSCEEEEETTT------TEEEEECTT-CSSCCSEEESBTTBCCCSTTCCSSE--EEEEECTTT-------
T ss_pred CceEE-EECCCCCEEEEECCC------CEEEEEeCC-CCeEEEEEecccCCCCCCccccCCC--cEEEEeCCC-------
Confidence 45543 345677777777654 689999986 55 677772 333333 3458998 5
Q ss_pred CCCEEEEEe-CCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCC-Ce-EEEEECCCcEEEEecc
Q 047036 374 PSESTFLGL-DDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD-GS-IVVGSLDGKIRLYSKT 450 (634)
Q Consensus 374 ~g~~laSGS-~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d-G~-IASGS~DGtIRLWD~~ 450 (634)
+.++++.+ .+++|++||+. + ..+..+........ ...++ -.....++++++ |. +++.+.++.|++||..
T Consensus 155 -g~lyv~d~~~~~~I~~~~~~-g-~~~~~~~~~g~~~~-~~~~~----~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 155 -GAVFVSDGYCNSRIVQFSPS-G-KFVTQWGEESSGSS-PRPGQ----FSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp -CCEEEEECSSCCEEEEECTT-S-CEEEEECEECCSSS-CCTTE----ESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred -CeEEEEeCCCCCeEEEEcCC-C-CEEEEeccCCCCCC-CCCcc----cCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 57788886 69999999954 3 34455432111000 00000 012467899988 75 5666788999999988
Q ss_pred ccccccccc--cCCCCCeEEEEECC------CCCEEEE-EcCCcEEEEEcccccCCCCeeeeec
Q 047036 451 SMRQAKTAF--PGLGSPITHVDVTY------DGKWILG-TTDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 451 t~r~akt~L--~GH~d~ItsVdfSp------DGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
+++ ....+ ++++..+.+++|+| +|+..++ +.+.+|++||.. +|+.+..|.
T Consensus 227 ~G~-~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~----~g~~~~~~~ 285 (329)
T 3fvz_A 227 TKE-FVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFS----SGEIIDVFK 285 (329)
T ss_dssp TCC-EEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETT----TCCEEEEEC
T ss_pred CCc-EEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcC----CCeEEEEEc
Confidence 554 44444 57888999999999 4443334 345689999975 677766653
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.95 E-value=1.7e-08 Score=102.24 Aligned_cols=146 Identities=10% Similarity=0.018 Sum_probs=91.8
Q ss_pred eCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCccee---E---------------EEEecCCCCCCCCCC
Q 047036 314 RGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDIT---M---------------RDITNDTKSSQLDPS 375 (634)
Q Consensus 314 ~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~---v---------------vsfsPd~K~~q~~~g 375 (634)
++|++.|+..+.+ ++|++||+.+|+....+..+..... . + .+++|+ +
T Consensus 89 spdg~~l~~~~~~------~~l~~~d~~~~~~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~spd--------g 153 (396)
T 3c5m_A 89 STDERAFFYVKNE------LNLMKVDLETLEEQVIYTVDEEWKG-YGTWVANSDCTKLVGIEILKRDWQPL--------T 153 (396)
T ss_dssp CTTSSEEEEEETT------TEEEEEETTTCCEEEEEECCTTEEE-EEEEEECTTSSEEEEEEEEGGGCCCC--------C
T ss_pred CCCCCEEEEEEcC------CcEEEEECCCCCcEEEEecccccCC-CCCEEEeccCCccccccccccccCCC--------C
Confidence 3344455444443 4799999999998777776654321 1 0 245666 3
Q ss_pred CEEEEE-----eCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECC-CC-eEEEEECC------C
Q 047036 376 ESTFLG-----LDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DG-SIVVGSLD------G 442 (634)
Q Consensus 376 ~~laSG-----S~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG-~IASGS~D------G 442 (634)
+.++.+ ..+..|++||+.++.. ..+..+ ...+..++++| +| +||..+.+ .
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~d~~~g~~--~~~~~~---------------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~ 216 (396)
T 3c5m_A 154 SWEKFAEFYHTNPTCRLIKVDIETGEL--EVIHQD---------------TAWLGHPIYRPFDDSTVGFCHEGPHDLVDA 216 (396)
T ss_dssp SHHHHHHHHHTCCCEEEEEEETTTCCE--EEEEEE---------------SSCEEEEEEETTEEEEEEEEECSCSSSCSC
T ss_pred cceeeeeeccCCCcceEEEEECCCCcE--EeeccC---------------CcccccceECCCCCCEEEEEecCCCCCCCc
Confidence 344433 4677899999987542 222211 12356778898 67 68777654 3
Q ss_pred cEEEEeccccccccccccCC-CCCeEEEEECCCCCEEEE-EcC-----CcEEEEEcc
Q 047036 443 KIRLYSKTSMRQAKTAFPGL-GSPITHVDVTYDGKWILG-TTD-----TYLILICTL 492 (634)
Q Consensus 443 tIRLWD~~t~r~akt~L~GH-~d~ItsVdfSpDGk~LlS-S~D-----~tIrLWD~~ 492 (634)
.|.+||+.+.+ .+...... ...|.+++|||||++|+. +.+ ++|.+||+.
T Consensus 217 ~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 217 RMWLVNEDGSN-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp CCEEEETTSCC-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred eEEEEECCCCc-eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence 68888976642 33333322 235889999999999887 554 459999964
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.93 E-value=1.6e-07 Score=105.87 Aligned_cols=135 Identities=11% Similarity=-0.022 Sum_probs=92.4
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCe----------------EEEEEcCCCC
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNR----------------LCQWDMRDRS 396 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~t----------------IklWD~R~~~ 396 (634)
.+|++||+++|+.+.....+.. + ..++|+|| |+.|+.++.+.. |++|++.++.
T Consensus 151 ~~i~v~d~~tg~~~~~~~~~~~-~--~~~~wspD--------g~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVLERVK-F--SCMAWTHD--------GKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp EEEEEEETTTTEEEEEEEEEEC-S--CCEEECTT--------SSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG
T ss_pred EEEEEEECCCCCCCcccccCcc-c--ceEEEEeC--------CCEEEEEEECCccccccccccccCCCCEEEEEECCCCc
Confidence 3899999999998875333332 2 33599999 678888888876 9999998754
Q ss_pred ce-EEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEEC-----CCcEEEEeccc------cccccccccCCC
Q 047036 397 GI-VQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSL-----DGKIRLYSKTS------MRQAKTAFPGLG 463 (634)
Q Consensus 397 ~~-Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~-----DGtIRLWD~~t------~r~akt~L~GH~ 463 (634)
.. +..+.+.. ....+..+++|||| +|+.++. +..|++||+.+ +......|..+.
T Consensus 220 ~~~~~v~~~~~-------------~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~ 286 (710)
T 2xdw_A 220 SEDILCAEFPD-------------EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF 286 (710)
T ss_dssp GGCEEEECCTT-------------CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS
T ss_pred ccceEEeccCC-------------CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC
Confidence 21 11111100 01124577899999 6877765 67999999875 321345666777
Q ss_pred CCeEEEEECCCCCEEEE-EcCC----cEEEEEcc
Q 047036 464 SPITHVDVTYDGKWILG-TTDT----YLILICTL 492 (634)
Q Consensus 464 d~ItsVdfSpDGk~LlS-S~D~----tIrLWD~~ 492 (634)
+.+.. .|+|||++|+. +.++ .|.+||+.
T Consensus 287 ~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 319 (710)
T 2xdw_A 287 EGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFT 319 (710)
T ss_dssp SSCEE-EEEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred CcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 77766 49999999987 6543 48888864
No 176
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.93 E-value=4.2e-08 Score=99.07 Aligned_cols=149 Identities=13% Similarity=0.094 Sum_probs=105.7
Q ss_pred ceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccC-CCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCC
Q 047036 318 NMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEK-DGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRS 396 (634)
Q Consensus 318 ~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~-~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~ 396 (634)
++|++++.+ +.|++||.+||+++.++..|. ..+ ..+.++|+ |++++ +.++.|..||+ +++
T Consensus 6 ~~lv~~~~~------~~v~~~d~~tG~~~w~~~~~~~~~~--~~~~~~pd--------G~ilv--s~~~~V~~~d~-~G~ 66 (276)
T 3no2_A 6 HLLVGGSGW------NKIAIINKDTKEIVWEYPLEKGWEC--NSVAATKA--------GEILF--SYSKGAKMITR-DGR 66 (276)
T ss_dssp EEEEECTTC------SEEEEEETTTTEEEEEEECCTTCCC--CEEEECTT--------SCEEE--ECBSEEEEECT-TSC
T ss_pred cEEEeeCCC------CEEEEEECCCCeEEEEeCCCccCCC--cCeEECCC--------CCEEE--eCCCCEEEECC-CCC
Confidence 455666554 699999999999999999876 233 34588998 67777 56889999999 543
Q ss_pred ceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEEC-CCcEEEEeccccccccccc------cCCCCCeEE
Q 047036 397 GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSL-DGKIRLYSKTSMRQAKTAF------PGLGSPITH 468 (634)
Q Consensus 397 ~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~-DGtIRLWD~~t~r~akt~L------~GH~d~Its 468 (634)
++..+..+ ....+.++.+.++| .|++.+. ++.|..+|..+ + .+..+ .++..++..
T Consensus 67 -~~W~~~~~--------------~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~G-k-~l~~~~~~~~~~~~~~~~~~ 129 (276)
T 3no2_A 67 -ELWNIAAP--------------AGCEMQTARILPDGNALVAWCGHPSTILEVNMKG-E-VLSKTEFETGIERPHAQFRQ 129 (276)
T ss_dssp -EEEEEECC--------------TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTS-C-EEEEEEECCSCSSGGGSCSC
T ss_pred -EEEEEcCC--------------CCccccccEECCCCCEEEEecCCCCEEEEEeCCC-C-EEEEEeccCCCCcccccccC
Confidence 45555311 11235677888998 5666676 77888888754 3 22222 233345678
Q ss_pred EEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCC
Q 047036 469 VDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGR 507 (634)
Q Consensus 469 VdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh 507 (634)
+++.+||++|++ +.++.|..||. +|+.+-.|..+
T Consensus 130 v~~~~~G~~lv~~~~~~~v~~~d~-----~G~~~w~~~~~ 164 (276)
T 3no2_A 130 INKNKKGNYLVPLFATSEVREIAP-----NGQLLNSVKLS 164 (276)
T ss_dssp CEECTTSCEEEEETTTTEEEEECT-----TSCEEEEEECS
T ss_pred ceECCCCCEEEEecCCCEEEEECC-----CCCEEEEEECC
Confidence 899999999999 77999999995 48877777653
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.85 E-value=3e-07 Score=92.01 Aligned_cols=147 Identities=14% Similarity=0.070 Sum_probs=95.9
Q ss_pred eCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC----CeEEE
Q 047036 314 RGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD----NRLCQ 389 (634)
Q Consensus 314 ~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D----~tIkl 389 (634)
+.++++++++..+ +.|++||+.+|++...+..+...+ ..++++|+ +.+++++..+ +.|.+
T Consensus 53 ~~~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~--~~i~~~~d--------g~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 53 DRQGQLFLLDVFE------GNIFKINPETKEIKRPFVSHKANP--AAIKIHKD--------GRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp CTTSCEEEEETTT------CEEEEECTTTCCEEEEEECSSSSE--EEEEECTT--------SCEEEEECTTSSSCCEEEE
T ss_pred CCCCCEEEEECCC------CEEEEEeCCCCcEEEEeeCCCCCc--ceEEECCC--------CcEEEEeCCCCCCCceEEE
Confidence 4455555555443 689999999998776554555544 45588887 5677777666 79999
Q ss_pred EEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECC-------CcEEEEeccccccccccccCC
Q 047036 390 WDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLD-------GKIRLYSKTSMRQAKTAFPGL 462 (634)
Q Consensus 390 WD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~D-------GtIRLWD~~t~r~akt~L~GH 462 (634)
||+.++.. ...+... .....+.+++++++|.|.+++.. +.|..||..+.+ .. .+..+
T Consensus 117 ~d~~~~~~-~~~~~~~-------------~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~-~~-~~~~~ 180 (333)
T 2dg1_A 117 ATENGDNL-QDIIEDL-------------STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VT-PIIQN 180 (333)
T ss_dssp ECTTSCSC-EEEECSS-------------SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EE-EEEEE
T ss_pred EeCCCCEE-EEEEccC-------------ccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE-EE-EeecC
Confidence 99987542 1122100 01234678899999976666552 556666655432 22 23233
Q ss_pred CCCeEEEEECCCCCEEE-E-EcCCcEEEEEcc
Q 047036 463 GSPITHVDVTYDGKWIL-G-TTDTYLILICTL 492 (634)
Q Consensus 463 ~d~ItsVdfSpDGk~Ll-S-S~D~tIrLWD~~ 492 (634)
...+.+|+|+|||++|. + +.++.|.+||+.
T Consensus 181 ~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 181 ISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 44689999999999765 4 457899999974
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.84 E-value=1e-06 Score=87.22 Aligned_cols=156 Identities=10% Similarity=0.017 Sum_probs=99.4
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCc--ceeEEEEecCCCCCCCCCCCEEEE----Ee--
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGT--DITMRDITNDTKSSQLDPSESTFL----GL-- 382 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V--~I~vvsfsPd~K~~q~~~g~~laS----GS-- 382 (634)
+..+.+++++++...+ +.|++||+.+|++......+.... .+.-++++|+ |.+.++ |+
T Consensus 74 l~~~~dg~l~v~~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~--------G~l~vtd~~~g~~~ 139 (296)
T 3e5z_A 74 HCLNKQGHLIACSHGL------RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD--------GSLWFSDPTYGIDK 139 (296)
T ss_dssp EEECTTCCEEEEETTT------TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT--------SCEEEEECSHHHHC
T ss_pred eeECCCCcEEEEecCC------CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC--------CCEEEECCcccccc
Confidence 4445566666665543 589999999998765443322110 0123478887 677777 43
Q ss_pred -----------CCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecc
Q 047036 383 -----------DDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKT 450 (634)
Q Consensus 383 -----------~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~ 450 (634)
..+.|..+|+. + . +..+..+. .....++++++| .|++.+.++.|++||+.
T Consensus 140 ~~~~~~~~~~~~~~~l~~~~~~-g-~-~~~~~~~~---------------~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 140 PEEGYGGEMELPGRWVFRLAPD-G-T-LSAPIRDR---------------VKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp GGGSSCCCCCSSSCEEEEECTT-S-C-EEEEECCC---------------SSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred ccccccccccCCCcEEEEECCC-C-C-EEEeecCC---------------CCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 13578888776 2 2 22332111 123578999999 56777888999999975
Q ss_pred -ccccc---cccccCCCCCeEEEEECCCCCEEEEEcCCcEEEEEcccccCCCCeeeeec
Q 047036 451 -SMRQA---KTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 451 -t~r~a---kt~L~GH~d~ItsVdfSpDGk~LlSS~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
.++ . ...+..+...+.+|+++++|+.++++ ++.|.+||. +|+.+..+.
T Consensus 202 ~~g~-~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~-----~g~~~~~~~ 253 (296)
T 3e5z_A 202 ARGE-TEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTP-----DGDELGRVL 253 (296)
T ss_dssp SSSC-EEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECT-----TSCEEEEEE
T ss_pred CCCc-CcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECC-----CCCEEEEEE
Confidence 222 2 22334455667899999999977777 899999994 466555444
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.83 E-value=1.6e-07 Score=105.76 Aligned_cols=132 Identities=14% Similarity=0.132 Sum_probs=88.1
Q ss_pred cEEEEeCCCCcEEEEEe------ccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCC-----eEEEEEcCCCCceEEec
Q 047036 334 GVQQLDIETGKIVTEWK------FEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDN-----RLCQWDMRDRSGIVQNM 402 (634)
Q Consensus 334 TIrlWDleTGK~V~~lk------gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~-----tIklWD~R~~~~~Vq~l 402 (634)
.|++.+...|+...-+. +|... +...+|||| |+.||.+++++ +|++||+.++.. ++..
T Consensus 99 ~l~~~~~~~~~~~~lld~~~l~~~~~~~--~~~~~~SPD--------g~~la~~~~~~G~~~~~i~v~d~~tg~~-~~~~ 167 (710)
T 2xdw_A 99 VLYVQDSLEGEARVFLDPNILSDDGTVA--LRGYAFSED--------GEYFAYGLSASGSDWVTIKFMKVDGAKE-LPDV 167 (710)
T ss_dssp EEEEESSTTSCCEEEECGGGGCTTSCEE--EEEEEECTT--------SSEEEEEEEETTCSCEEEEEEETTTTEE-EEEE
T ss_pred EEEEEcCCCCCcEEEECHHHhccCCCEE--EEEEEECCC--------CCEEEEEEcCCCCceEEEEEEECCCCCC-Cccc
Confidence 46666665554322222 23222 345699999 56787766654 999999988643 2221
Q ss_pred ccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCc----------------EEEEeccccccc-cc--cccCC
Q 047036 403 VKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGK----------------IRLYSKTSMRQA-KT--AFPGL 462 (634)
Q Consensus 403 ~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGt----------------IRLWD~~t~r~a-kt--~L~GH 462 (634)
. ....+.+++++||| .|+.++.++. |++|++.+.+.. .. ..+.|
T Consensus 168 ~----------------~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~ 231 (710)
T 2xdw_A 168 L----------------ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE 231 (710)
T ss_dssp E----------------EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC
T ss_pred c----------------cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC
Confidence 1 01124567899999 7999998877 999998775311 12 22345
Q ss_pred CCCeEEEEECCCCCEEEE-Ec-----CCcEEEEEcc
Q 047036 463 GSPITHVDVTYDGKWILG-TT-----DTYLILICTL 492 (634)
Q Consensus 463 ~d~ItsVdfSpDGk~LlS-S~-----D~tIrLWD~~ 492 (634)
...+.+++|||||++|+. +. ++.|.+||+.
T Consensus 232 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 267 (710)
T 2xdw_A 232 PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQ 267 (710)
T ss_dssp TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGG
T ss_pred CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECc
Confidence 667899999999999997 54 5789999975
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.82 E-value=1.3e-06 Score=90.87 Aligned_cols=58 Identities=14% Similarity=0.063 Sum_probs=44.0
Q ss_pred CcEEEEeCCCCcEEEEEecc------CCCcceeEEEEecCCCCCCCCCCCEEEEEeC--CCeEEEEEcCCCCceEEe
Q 047036 333 PGVQQLDIETGKIVTEWKFE------KDGTDITMRDITNDTKSSQLDPSESTFLGLD--DNRLCQWDMRDRSGIVQN 401 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH------~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~--D~tIklWD~R~~~~~Vq~ 401 (634)
++|.+||+.+++++.++..+ .... .-++|+|| |+.|+++.. +++|.+||+++++ ++..
T Consensus 81 ~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p--~~i~~spd--------g~~l~v~n~~~~~~v~v~d~~~~~-~~~~ 146 (361)
T 2oiz_A 81 DVVEVWDADKLTFEKEISLPPKRVQGLNYD--GLFRQTTD--------GKFIVLQNASPATSIGIVDVAKGD-YVED 146 (361)
T ss_dssp EEEEEEETTTCCEEEEEEECTTBCCBCCCG--GGEEECTT--------SSEEEEEEESSSEEEEEEETTTTE-EEEE
T ss_pred CEEEEEECcCCcEEEEEEcCccccccCCCc--ceEEECCC--------CCEEEEECCCCCCeEEEEECCCCc-EEEE
Confidence 58999999999999998753 1222 23489999 567887763 6899999999864 4555
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.82 E-value=2.6e-08 Score=109.78 Aligned_cols=131 Identities=11% Similarity=-0.030 Sum_probs=88.9
Q ss_pred CcEEEEeCCC------CcEEEEEe-ccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC--------CeEEEEEcC-CCC
Q 047036 333 PGVQQLDIET------GKIVTEWK-FEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD--------NRLCQWDMR-DRS 396 (634)
Q Consensus 333 ~TIrlWDleT------GK~V~~lk-gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D--------~tIklWD~R-~~~ 396 (634)
.+|++||+.+ |++ +.+. .|...+ ...+|||| |+.|+.++.+ ..|++||+. ++.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~--~~~~~SpD--------G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAV-RELSDDAHRFV--TGPRLSPD--------GRQAVWLAWDHPRMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp EEEEEEETTSTTTTCGGGS-EESSCSCSSEE--CCCEECTT--------SSEEEEEEECTTCCTTTCEEEEEEEECTTSC
T ss_pred eEEEEEECCCCccccCCce-eEEEecCCCcc--cCceECCC--------CCEEEEEECCCCCCCCCCcEEEEEEECCCCc
Confidence 4799999998 665 4454 444443 34589999 6788877755 489999998 441
Q ss_pred --ceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCC--cEEEEeccccccccccccCCCCC------
Q 047036 397 --GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDG--KIRLYSKTSMRQAKTAFPGLGSP------ 465 (634)
Q Consensus 397 --~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DG--tIRLWD~~t~r~akt~L~GH~d~------ 465 (634)
...+...+| ...+.+++++||| .+++++.+| .|.+||+.+++ .+..++++...
T Consensus 230 ~~~~~~l~~~~---------------~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~p~w~ 293 (662)
T 3azo_A 230 FADTRTLLGGP---------------EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA-ATQLCRREEEFAGPLWT 293 (662)
T ss_dssp EEEEEEEEEET---------------TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC-EEESSCCSSBSSCCCCS
T ss_pred ccccEEeCCCC---------------CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc-eeecccccccccCcccc
Confidence 222222111 1235678899999 567778888 66666765543 44555555443
Q ss_pred --eEEEEECCCCCEEEE-EcCCcEEEEEc
Q 047036 466 --ITHVDVTYDGKWILG-TTDTYLILICT 491 (634)
Q Consensus 466 --ItsVdfSpDGk~LlS-S~D~tIrLWD~ 491 (634)
+.+++|+|+|+++++ +. ++++||.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 294 PGMRWFAPLANGLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp TTCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred ccCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence 678999999999998 56 99999954
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.76 E-value=2.9e-08 Score=100.53 Aligned_cols=142 Identities=12% Similarity=-0.016 Sum_probs=88.2
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
..|++||+.+|+..+...++.... ....|+|| |+.|+.++.++.|++||+.++.. ......+.. |
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~~~--~~~~~spd--------g~~l~~~~~~~~l~~~d~~~~~~-~~~~~~~~~----~ 124 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGDNT--FGGFISTD--------ERAFFYVKNELNLMKVDLETLEE-QVIYTVDEE----W 124 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCBCT--TTCEECTT--------SSEEEEEETTTEEEEEETTTCCE-EEEEECCTT----E
T ss_pred ceEEEEECCCCcEEEeecCCCCcc--ccceECCC--------CCEEEEEEcCCcEEEEECCCCCc-EEEEecccc----c
Confidence 479999999988655444443221 22478999 67899999999999999987642 222221221 1
Q ss_pred c-cccccc--cCcceE-----EEEECCCC-eEEEE-----ECCCcEEEEeccccccccccccCCCCCeEEEEECC-CCCE
Q 047036 413 T-QGHQFS--RGTNFQ-----CFASTGDG-SIVVG-----SLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTY-DGKW 477 (634)
Q Consensus 413 ~-~g~~y~--~~~~fs-----sva~s~dG-~IASG-----S~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSp-DGk~ 477 (634)
. .++... ...... .++++|+| .|+.+ ..++.|++||+.+++ .. .+..+...+..+.||| ||++
T Consensus 125 ~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~-~~-~~~~~~~~~~~~~~sp~dg~~ 202 (396)
T 3c5m_A 125 KGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE-LE-VIHQDTAWLGHPIYRPFDDST 202 (396)
T ss_dssp EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC-EE-EEEEESSCEEEEEEETTEEEE
T ss_pred CCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc-EE-eeccCCcccccceECCCCCCE
Confidence 1 011000 000000 02457777 45544 467899999988753 33 3345677899999999 8998
Q ss_pred EEE-EcC------CcEEEEEc
Q 047036 478 ILG-TTD------TYLILICT 491 (634)
Q Consensus 478 LlS-S~D------~tIrLWD~ 491 (634)
|+. +.+ ..|.+||+
T Consensus 203 l~~~~~~~~~~~~~~l~~~d~ 223 (396)
T 3c5m_A 203 VGFCHEGPHDLVDARMWLVNE 223 (396)
T ss_dssp EEEEECSCSSSCSCCCEEEET
T ss_pred EEEEecCCCCCCCceEEEEEC
Confidence 887 543 35777775
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.76 E-value=7.1e-07 Score=100.41 Aligned_cols=194 Identities=14% Similarity=0.103 Sum_probs=112.1
Q ss_pred EEEeee-CCCeEEE-----ec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCC
Q 047036 258 SLTLGA-LDNSFLV-----SD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDG 328 (634)
Q Consensus 258 ~LavG~-~D~sfvv-----~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~ 328 (634)
...+.+ +|+++++ .| ..|.||....+...-.. .+.+.. ..+..|+|++ +.|+.++.+..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~---~~~~~~-~~~~~wspDg--------~~l~~~~~d~~ 190 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD---VIEGGK-YATPKWTPDS--------KGFYYEWLPTD 190 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC---CBSCCT-TCCCEECTTS--------SEEEEEECCCC
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc---ccCccc-ccceEEecCC--------CEEEEEEecCC
Confidence 444555 8998888 56 37888886553311000 111110 0355666655 44444444320
Q ss_pred C-------CCCCcEEEEeCCCCc----EEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCC----eEEEEEcC
Q 047036 329 K-------PQAPGVQQLDIETGK----IVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDN----RLCQWDMR 393 (634)
Q Consensus 329 ~-------~~~~TIrlWDleTGK----~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~----tIklWD~R 393 (634)
. .....|++|++.+|+ ++.+...|...+ ..+.|+|| |+.|+.++.++ .|++||..
T Consensus 191 ~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~--~~~~~SpD--------G~~l~~~~~~~~~~~~l~~~~~~ 260 (695)
T 2bkl_A 191 PSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTF--LQSDLSRD--------GKYLFVYILRGWSENDVYWKRPG 260 (695)
T ss_dssp TTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCE--EEEEECTT--------SCCEEEEEEETTTEEEEEEECTT
T ss_pred CCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEE--EEEEECCC--------CCEEEEEEeCCCCceEEEEEcCC
Confidence 0 011349999999987 555555565444 34589999 55677766665 77777765
Q ss_pred CCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEEC----CCcEEEEecccccc--ccccccCC-CCCe
Q 047036 394 DRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSL----DGKIRLYSKTSMRQ--AKTAFPGL-GSPI 466 (634)
Q Consensus 394 ~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~----DGtIRLWD~~t~r~--akt~L~GH-~d~I 466 (634)
.+. ++.|..+... .... .+++++ |+..+. ++.|.+||+.++.. ....++.+ ...|
T Consensus 261 ~~~--~~~l~~~~~~--------------~~~~-~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l 322 (695)
T 2bkl_A 261 EKD--FRLLVKGVGA--------------KYEV-HAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASL 322 (695)
T ss_dssp CSS--CEEEEECSSC--------------CEEE-EEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEE
T ss_pred CCc--eEEeecCCCc--------------eEEE-EecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeE
Confidence 432 2334322211 1222 334444 555443 68999999876421 23445544 5568
Q ss_pred EEEEECCCCCEEEE-EcCCcEEEEEcc
Q 047036 467 THVDVTYDGKWILG-TTDTYLILICTL 492 (634)
Q Consensus 467 tsVdfSpDGk~LlS-S~D~tIrLWD~~ 492 (634)
.+++++ +++.+++ ..|+..+||.+.
T Consensus 323 ~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 323 LSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred EEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 899999 7777777 889999999754
No 184
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.76 E-value=1.6e-07 Score=100.88 Aligned_cols=172 Identities=14% Similarity=0.071 Sum_probs=116.6
Q ss_pred CCcEEEeeeCCCeEEEe-cCeeeEEEccCCc--e-----ecce-eEEEecCCCCCcccccCcceeeEEeCCcceEEecCC
Q 047036 255 GVQSLTLGALDNSFLVS-DLGLQVYRNYNRG--I-----HNKG-VSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPL 325 (634)
Q Consensus 255 ~~~~LavG~~D~sfvv~-G~~igV~k~~~~g--l-----~~~~-~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~ 325 (634)
..+.||++..-+-+++. ++++.||+...-. + .+.. ....+ -. ...+-+ |++.|+.+ .
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~l----------p~-V~~l~f--d~~~L~v~-~ 104 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEI----------PD-VIFVCF--HGDQVLVS-T 104 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEEC----------TT-EEEEEE--ETTEEEEE-E
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeC----------CC-eeEEEE--CCCEEEEE-c
Confidence 35788888855555554 4788888853211 0 0111 11111 11 223333 66777776 3
Q ss_pred CCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccC
Q 047036 326 KDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKG 405 (634)
Q Consensus 326 d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh 405 (634)
+ +.|++||+.+-........|...| .++.|- ...+++++.||+|.+||+..+.. .+ +
T Consensus 105 ~------~~l~v~dv~sl~~~~~~~~~~~~v----~~i~~~--------~p~~av~~~dG~L~v~dl~~~~~-~~-~--- 161 (388)
T 1xip_A 105 R------NALYSLDLEELSEFRTVTSFEKPV----FQLKNV--------NNTLVILNSVNDLSALDLRTKST-KQ-L--- 161 (388)
T ss_dssp S------SEEEEEESSSTTCEEEEEECSSCE----EEEEEC--------SSEEEEEETTSEEEEEETTTCCE-EE-E---
T ss_pred C------CcEEEEEchhhhccCccceeecce----eeEEec--------CCCEEEEECCCCEEEEEccCCcc-cc-c---
Confidence 2 689999998777666777787654 233332 12499999999999999986543 22 1
Q ss_pred CCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccc--cccc------c---CCCCCeEEEEECCC
Q 047036 406 DSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQA--KTAF------P---GLGSPITHVDVTYD 474 (634)
Q Consensus 406 ~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~a--kt~L------~---GH~d~ItsVdfSpD 474 (634)
...++|+|++|+| +++|..||+|++|+..+.. . +.+| . +|...|.+|.+.++
T Consensus 162 ---------------~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~~~-~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 162 ---------------AQNVTSFDVTNSQ-LAVLLKDRSFQSFAWRNGE-MEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp ---------------EESEEEEEECSSE-EEEEETTSCEEEEEEETTE-EEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred ---------------cCCceEEEEcCCc-eEEEEcCCcEEEEcCCCcc-ccccceecCCcccccccCCCeeEEEEEEecC
Confidence 1257999999999 8899999999999987643 3 4455 2 47889999999999
Q ss_pred CCEEEE
Q 047036 475 GKWILG 480 (634)
Q Consensus 475 Gk~LlS 480 (634)
++||++
T Consensus 225 ~~flv~ 230 (388)
T 1xip_A 225 QDFLAV 230 (388)
T ss_dssp SEEEEE
T ss_pred CeEEEE
Confidence 999998
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.75 E-value=1.1e-07 Score=106.89 Aligned_cols=131 Identities=14% Similarity=0.038 Sum_probs=86.9
Q ss_pred cEEEEeCCCCcEEEEEe------ccCCCcceeEEEEecCCCCCCCCCCCEEE-----EEeCCCeEEEEEcCCCCceEEec
Q 047036 334 GVQQLDIETGKIVTEWK------FEKDGTDITMRDITNDTKSSQLDPSESTF-----LGLDDNRLCQWDMRDRSGIVQNM 402 (634)
Q Consensus 334 TIrlWDleTGK~V~~lk------gH~~~V~I~vvsfsPd~K~~q~~~g~~la-----SGS~D~tIklWD~R~~~~~Vq~l 402 (634)
.|++.+...|+...-+. +|... +...+|||| |+.|| +|+.+.+|++||+.++.. ++
T Consensus 95 ~l~~~~~~~~~~~~l~d~~~~a~~~~~~--~~~~~~SPD--------G~~la~~~~~~G~~~~~i~v~dl~tg~~-~~-- 161 (695)
T 2bkl_A 95 ILYWRQGESGQEKVLLDPNGWSKDGTVS--LGTWAVSWD--------GKKVAFAQKPNAADEAVLHVIDVDSGEW-SK-- 161 (695)
T ss_dssp EEEEEESTTSCCEEEECGGGSSSSSCEE--EEEEEECTT--------SSEEEEEEEETTCSCCEEEEEETTTCCB-CS--
T ss_pred EEEEEcCCCCCcEEEEchHHhccCCCEE--EEEEEECCC--------CCEEEEEECCCCCceEEEEEEECCCCCC-cC--
Confidence 46777766555333332 34422 355699999 56777 556678999999998653 10
Q ss_pred ccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCc-------------EEEEecccccc---ccccccCCCCC
Q 047036 403 VKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGK-------------IRLYSKTSMRQ---AKTAFPGLGSP 465 (634)
Q Consensus 403 ~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGt-------------IRLWD~~t~r~---akt~L~GH~d~ 465 (634)
..+. ....+.+++++||| .|+.++.|.. |++|++.++.. .....++|...
T Consensus 162 ~~~~-------------~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~ 228 (695)
T 2bkl_A 162 VDVI-------------EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTT 228 (695)
T ss_dssp SCCB-------------SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTC
T ss_pred Cccc-------------CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEE
Confidence 1111 11123567899999 7999999887 99999877531 22234456678
Q ss_pred eEEEEECCCCCEEEE-EcCC----cEEEEE
Q 047036 466 ITHVDVTYDGKWILG-TTDT----YLILIC 490 (634)
Q Consensus 466 ItsVdfSpDGk~LlS-S~D~----tIrLWD 490 (634)
+.++.|||||++|+. +.++ .|.+|+
T Consensus 229 ~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~ 258 (695)
T 2bkl_A 229 FLQSDLSRDGKYLFVYILRGWSENDVYWKR 258 (695)
T ss_dssp EEEEEECTTSCCEEEEEEETTTEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEEeCCCCceEEEEEc
Confidence 999999999999987 6555 455554
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.70 E-value=1.2e-06 Score=98.14 Aligned_cols=93 Identities=11% Similarity=0.138 Sum_probs=69.3
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcC--CCCceEEecccCCCCcc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMR--DRSGIVQNMVKGDSPVL 410 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R--~~~~~Vq~l~gh~s~V~ 410 (634)
++|.++|+.|++++.++..... + ..+.|+|| ++.+++++.|++|.+||+. +. .++..+..
T Consensus 177 ~~V~viD~~t~~v~~~i~~g~~-p--~~v~~SpD--------Gr~lyv~~~dg~V~viD~~~~t~-~~v~~i~~------ 238 (567)
T 1qks_A 177 GQIALIDGSTYEIKTVLDTGYA-V--HISRLSAS--------GRYLFVIGRDGKVNMIDLWMKEP-TTVAEIKI------ 238 (567)
T ss_dssp TEEEEEETTTCCEEEEEECSSC-E--EEEEECTT--------SCEEEEEETTSEEEEEETTSSSC-CEEEEEEC------
T ss_pred CeEEEEECCCCeEEEEEeCCCC-c--cceEECCC--------CCEEEEEcCCCeEEEEECCCCCC-cEeEEEec------
Confidence 6999999999999999986543 2 35589999 6789999999999999996 44 34444431
Q ss_pred ccccccccccCcceEEEEEC----CCC-eEEEEE-CCCcEEEEeccccc
Q 047036 411 HWTQGHQFSRGTNFQCFAST----GDG-SIVVGS-LDGKIRLYSKTSMR 453 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s----~dG-~IASGS-~DGtIRLWD~~t~r 453 (634)
...-..++++ |+| ++++++ .+++|.++|..+++
T Consensus 239 ----------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 239 ----------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp ----------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred ----------CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 1122467888 588 666554 55999999987753
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.69 E-value=6.9e-07 Score=89.41 Aligned_cols=120 Identities=12% Similarity=0.067 Sum_probs=85.6
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
++++.| .++.+..+.+|...+ ..++|+|+ +.+++++..++.|++||+.++.. ...+..
T Consensus 27 ~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~--------g~l~~~~~~~~~i~~~d~~~~~~-~~~~~~-------- 84 (333)
T 2dg1_A 27 SELQTI---TAEPWLEISKKGLQL--EGLNFDRQ--------GQLFLLDVFEGNIFKINPETKEI-KRPFVS-------- 84 (333)
T ss_dssp GGSCEE---ECEEEEEEESSCCCE--EEEEECTT--------SCEEEEETTTCEEEEECTTTCCE-EEEEEC--------
T ss_pred ccCccc---ccceeEEEeccCccc--cCcEECCC--------CCEEEEECCCCEEEEEeCCCCcE-EEEeeC--------
Confidence 579999 577888888877654 34588887 67778899999999999987542 221111
Q ss_pred ccccccccCcceEEEEECCCCeEEEE-ECC----CcEEEEecccccccccccc--CCCCCeEEEEECCCCCEEEEEc
Q 047036 413 TQGHQFSRGTNFQCFASTGDGSIVVG-SLD----GKIRLYSKTSMRQAKTAFP--GLGSPITHVDVTYDGKWILGTT 482 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~dG~IASG-S~D----GtIRLWD~~t~r~akt~L~--GH~d~ItsVdfSpDGk~LlSS~ 482 (634)
....+.+++++++|.|.++ ..+ +.|.+||..+.+ ....+. .+...+.+|+++|||+.++++.
T Consensus 85 -------~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 85 -------HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN-LQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp -------SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS-CEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred -------CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE-EEEEEccCccCCcccceEECCCCCEEEEec
Confidence 1234678899999965544 444 589999987753 332232 3567899999999999888854
No 188
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.68 E-value=9.2e-05 Score=71.64 Aligned_cols=146 Identities=12% Similarity=0.096 Sum_probs=95.3
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEec--cCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEE
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKF--EKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLC 388 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkg--H~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIk 388 (634)
+..+.+++++++...+ +.|++||.. |+. ..+.. +...+ ..+++.|+ +.+.++...++.|.
T Consensus 62 i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~-~~~~~~~~~~~~--~~i~~~~~--------g~l~v~~~~~~~i~ 123 (299)
T 2z2n_A 62 LTISSDGEVWFTENAA------NKIGRITKK-GII-KEYTLPNPDSAP--YGITEGPN--------GDIWFTEMNGNRIG 123 (299)
T ss_dssp EEECTTSCEEEEETTT------TEEEEECTT-SCE-EEEECSSTTCCE--EEEEECTT--------SCEEEEETTTTEEE
T ss_pred EEECCCCCEEEeCCCC------CeEEEECCC-CcE-EEEeCCCcCCCc--eeeEECCC--------CCEEEEecCCceEE
Confidence 4445666766665543 579999987 664 44442 22222 34577776 56777777789999
Q ss_pred EEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEE-CCCcEEEEeccccccccccccCCCCCeE
Q 047036 389 QWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGS-LDGKIRLYSKTSMRQAKTAFPGLGSPIT 467 (634)
Q Consensus 389 lWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS-~DGtIRLWD~~t~r~akt~L~GH~d~It 467 (634)
+||+ .+.. ..+... .......+++++++|.|.++. ..+.|..||. +++.....++.+...+.
T Consensus 124 ~~d~-~g~~--~~~~~~-------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~ 186 (299)
T 2z2n_A 124 RITD-DGKI--REYELP-------------NKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPV 186 (299)
T ss_dssp EECT-TCCE--EEEECS-------------STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEE
T ss_pred EECC-CCCE--EEecCC-------------CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcce
Confidence 9999 4332 222100 011235788899999765554 5689999998 54322223555567789
Q ss_pred EEEECCCCCEEEEE-cCCcEEEEEc
Q 047036 468 HVDVTYDGKWILGT-TDTYLILICT 491 (634)
Q Consensus 468 sVdfSpDGk~LlSS-~D~tIrLWD~ 491 (634)
+|+++++|+..+++ .++.|.+||.
T Consensus 187 ~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 187 GITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp EEEECTTSSEEEEETTTTEEEEECT
T ss_pred eEEECCCCCEEEEccCCceEEEECC
Confidence 99999999987774 5788999985
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.68 E-value=4e-06 Score=85.68 Aligned_cols=202 Identities=9% Similarity=0.008 Sum_probs=121.9
Q ss_pred EEEeeeCCCeEEEe--cCeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCCcE
Q 047036 258 SLTLGALDNSFLVS--DLGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGV 335 (634)
Q Consensus 258 ~LavG~~D~sfvv~--G~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TI 335 (634)
.||+...++-|+.. +..|.+|......+ ...+.... ..+..-.|.++.+ .++.+++++... +++|
T Consensus 88 ~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~-----~~~i~~g~-~~~~~~~p~~i~~--~~~~lyv~~~~~-----~~~v 154 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIWDYRIFIINPKTYEI-----TGYIECPD-MDMESGSTEQMVQ--YGKYVYVNCWSY-----QNRI 154 (328)
T ss_dssp EEEEEETTEEEEEEBSCSEEEEEETTTTEE-----EEEEECTT-CCTTTCBCCCEEE--ETTEEEEEECTT-----CCEE
T ss_pred EEEEeCCCeEEEEECCCCeEEEEECCCCeE-----EEEEEcCC-ccccCCCcceEEE--ECCEEEEEcCCC-----CCEE
Confidence 45543334455665 46787777544321 11222110 0122225666544 344555554321 2689
Q ss_pred EEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC----------CeEEEEEcCCCCceEEecccC
Q 047036 336 QQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD----------NRLCQWDMRDRSGIVQNMVKG 405 (634)
Q Consensus 336 rlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D----------~tIklWD~R~~~~~Vq~l~gh 405 (634)
.++|++++++++++...... .-+.++|+ |.+.+++..+ ++|.+||++++. ++..+.-.
T Consensus 155 ~viD~~t~~~~~~i~~g~~p---~~i~~~~d--------G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~-v~~~~~~~ 222 (328)
T 3dsm_A 155 LKIDTETDKVVDELTIGIQP---TSLVMDKY--------NKMWTITDGGYEGSPYGYEAPSLYRIDAETFT-VEKQFKFK 222 (328)
T ss_dssp EEEETTTTEEEEEEECSSCB---CCCEECTT--------SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE-EEEEEECC
T ss_pred EEEECCCCeEEEEEEcCCCc---cceEEcCC--------CCEEEEECCCccCCccccCCceEEEEECCCCe-EEEEEecC
Confidence 99999999999998765432 23478887 5556665554 799999998753 34443200
Q ss_pred CCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccc-cccCCCCCeEEEEECCCCCEE-EEE-
Q 047036 406 DSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKT-AFPGLGSPITHVDVTYDGKWI-LGT- 481 (634)
Q Consensus 406 ~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt-~L~GH~d~ItsVdfSpDGk~L-lSS- 481 (634)
.......++++|+| +|.++.. +|.+||..+++.... .++.++....+|+++|++..| ++.
T Consensus 223 --------------~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~ 286 (328)
T 3dsm_A 223 --------------LGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADA 286 (328)
T ss_dssp --------------TTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEEC
T ss_pred --------------CCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcc
Confidence 01124678999977 6766654 999999877532112 233335678999999955444 444
Q ss_pred ----cCCcEEEEEcccccCCCCeeeeec
Q 047036 482 ----TDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 482 ----~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
.+++|.+||. +|+.+..|.
T Consensus 287 ~~y~~~~~V~v~d~-----~g~~~~~i~ 309 (328)
T 3dsm_A 287 IDYQQQGIVYRYSP-----QGKLIDEFY 309 (328)
T ss_dssp TTSSSEEEEEEECT-----TCCEEEEEE
T ss_pred cccccCCEEEEECC-----CCCEEEEEE
Confidence 3688999995 477777665
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.68 E-value=5.8e-07 Score=91.94 Aligned_cols=134 Identities=13% Similarity=0.003 Sum_probs=89.8
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe-CCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL-DDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS-~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
++|.+||+.||+++.++.+... . .-++++|+ + .++.+. .+++|.+||+.+.. ++..+......
T Consensus 64 ~~v~viD~~t~~~~~~i~~~~~-p--~~i~~~~~--------g-~lyv~~~~~~~v~~iD~~t~~-~~~~i~~g~~~--- 127 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGFTS-P--RYIHFLSD--------E-KAYVTQIWDYRIFIINPKTYE-ITGYIECPDMD--- 127 (328)
T ss_dssp TEEEEEETTTCCEEEEEECCSS-E--EEEEEEET--------T-EEEEEEBSCSEEEEEETTTTE-EEEEEECTTCC---
T ss_pred CEEEEEECcccEEEEEcCCCCC-C--cEEEEeCC--------C-eEEEEECCCCeEEEEECCCCe-EEEEEEcCCcc---
Confidence 6899999999999999975443 2 34588887 4 455554 89999999998754 34444211100
Q ss_pred cccccccccCcceEEEEECCCCeEEEEE--CCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEEEc-C-----
Q 047036 412 WTQGHQFSRGTNFQCFASTGDGSIVVGS--LDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTT-D----- 483 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~dG~IASGS--~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlSS~-D----- 483 (634)
++ ......+++ .+++|.++. .+++|.+||+.+++ ....++. +....+|.++|||++++++. +
T Consensus 128 ---~~----~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~-~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 128 ---ME----SGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDK-VVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp ---TT----TCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTE-EEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred ---cc----CCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCe-EEEEEEc-CCCccceEEcCCCCEEEEECCCccCCc
Confidence 00 001123455 566766665 48999999998764 4445543 34457899999999877743 3
Q ss_pred -----CcEEEEEcc
Q 047036 484 -----TYLILICTL 492 (634)
Q Consensus 484 -----~tIrLWD~~ 492 (634)
+.|.+||..
T Consensus 198 ~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 198 YGYEAPSLYRIDAE 211 (328)
T ss_dssp SCBCCCEEEEEETT
T ss_pred cccCCceEEEEECC
Confidence 689999974
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.65 E-value=2.3e-06 Score=86.30 Aligned_cols=147 Identities=7% Similarity=0.075 Sum_probs=102.1
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeC-CCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLD-DNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~-D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
+.|+.||. +|+++.+++.+... .+....+.|+ |+.+++.+. +++|..+|+. + +.+..+.-... +.
T Consensus 56 ~~V~~~d~-~G~~~W~~~~~~~~-~~~~~~~~~d--------G~~lv~~~~~~~~v~~vd~~-G-k~l~~~~~~~~-~~- 121 (276)
T 3no2_A 56 KGAKMITR-DGRELWNIAAPAGC-EMQTARILPD--------GNALVAWCGHPSTILEVNMK-G-EVLSKTEFETG-IE- 121 (276)
T ss_dssp SEEEEECT-TSCEEEEEECCTTC-EEEEEEECTT--------SCEEEEEESTTEEEEEECTT-S-CEEEEEEECCS-CS-
T ss_pred CCEEEECC-CCCEEEEEcCCCCc-cccccEECCC--------CCEEEEecCCCCEEEEEeCC-C-CEEEEEeccCC-CC-
Confidence 57999999 89999999986421 2345578888 678888887 8889888873 3 34444421000 00
Q ss_pred cccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEE
Q 047036 412 WTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILI 489 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLW 489 (634)
..|. ....++..++| +|++.+.++.|.+||.. ++ .+-.+... ..+.++.+.++|+.|++ +.+++|..+
T Consensus 122 --~~~~-----~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~-~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~ 191 (276)
T 3no2_A 122 --RPHA-----QFRQINKNKKGNYLVPLFATSEVREIAPN-GQ-LLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQL 191 (276)
T ss_dssp --SGGG-----SCSCCEECTTSCEEEEETTTTEEEEECTT-SC-EEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEE
T ss_pred --cccc-----cccCceECCCCCEEEEecCCCEEEEECCC-CC-EEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEE
Confidence 0011 12233567787 78889999999999988 54 55555543 45678999999999999 566789999
Q ss_pred EcccccCCCCeeeeecCC
Q 047036 490 CTLFSDKDGKTKTGFSGR 507 (634)
Q Consensus 490 D~~~~~~~G~~~~gF~gh 507 (634)
|.. +|+.+-.|..+
T Consensus 192 d~~----tG~~~w~~~~~ 205 (276)
T 3no2_A 192 NLE----SNRIVRRVNAN 205 (276)
T ss_dssp CTT----TCCEEEEEEGG
T ss_pred eCc----CCcEEEEecCC
Confidence 964 58888777643
No 192
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.61 E-value=1.1e-05 Score=80.67 Aligned_cols=152 Identities=11% Similarity=0.106 Sum_probs=91.1
Q ss_pred cceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCe
Q 047036 307 PKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNR 386 (634)
Q Consensus 307 P~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~t 386 (634)
|.+..++..++.+++++... ++|+.||+.+|+. ..+... ..+ ..++++|+ +.++ .+. ++.
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~------~~i~~~d~~~~~~-~~~~~~-~~~--~~i~~~~d--------G~l~-v~~-~~~ 74 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPA------KKVCRWDSFTKQV-QRVTMD-APV--SSVALRQS--------GGYV-ATI-GTK 74 (297)
T ss_dssp EEEEEEETTTTEEEEEETTT------TEEEEEETTTCCE-EEEECS-SCE--EEEEEBTT--------SSEE-EEE-TTE
T ss_pred ccCCeEECCCCEEEEEECCC------CEEEEEECCCCcE-EEEeCC-Cce--EEEEECCC--------CCEE-EEE-CCe
Confidence 44554444445556665543 6899999998876 445433 333 45588887 5544 444 679
Q ss_pred EEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEEC----------CCcEEEEecccccccc
Q 047036 387 LCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSL----------DGKIRLYSKTSMRQAK 456 (634)
Q Consensus 387 IklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~----------DGtIRLWD~~t~r~ak 456 (634)
|.+||+.++. ++.+..... + .....+..++++++|.|..++. ....+||-+.......
T Consensus 75 l~~~d~~~g~--~~~~~~~~~-------~---~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~ 142 (297)
T 3g4e_A 75 FCALNWKEQS--AVVLATVDN-------D---KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK 142 (297)
T ss_dssp EEEEETTTTE--EEEEEECCT-------T---CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE
T ss_pred EEEEECCCCc--EEEEEecCC-------C---CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE
Confidence 9999998653 233321100 0 0123467788999997666542 1334555443211122
Q ss_pred ccccCCCCCeEEEEECCCCCEEE-E-EcCCcEEEEEc
Q 047036 457 TAFPGLGSPITHVDVTYDGKWIL-G-TTDTYLILICT 491 (634)
Q Consensus 457 t~L~GH~d~ItsVdfSpDGk~Ll-S-S~D~tIrLWD~ 491 (634)
. +..+....++|+|+|||++|. + +.++.|.+||+
T Consensus 143 ~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~ 178 (297)
T 3g4e_A 143 K-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDY 178 (297)
T ss_dssp E-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEE
T ss_pred E-EeeccccccceEEcCCCCEEEEecCCCCcEEEEec
Confidence 2 223334568999999999774 4 66889999986
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.60 E-value=2.5e-06 Score=82.36 Aligned_cols=149 Identities=11% Similarity=0.002 Sum_probs=97.3
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEE
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQW 390 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklW 390 (634)
+..+.++++++++..+ +.|++||..++........+...+ .-++++|+ +.+.++...++.|.+|
T Consensus 113 i~~~~~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~~~~~p--~~i~~~~~--------g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 113 LAVDTQGAVYVADRGN------NRVVKLAAGSKTQTVLPFTGLNDP--DGVAVDNS--------GNVYVTDTDNNRVVKL 176 (270)
T ss_dssp EEECTTCCEEEEEGGG------TEEEEECTTCCSCEECCCCSCCSC--CCEEECTT--------CCEEEEEGGGTEEEEE
T ss_pred eEECCCCCEEEEECCC------CEEEEEECCCceeEeeccccCCCc--eeEEEeCC--------CCEEEEECCCCEEEEE
Confidence 3445566666665543 589999887665543322222222 23478887 5677777778999999
Q ss_pred EcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEE-ECCCcEEEEeccccccccccccCCCCCeEEE
Q 047036 391 DMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVG-SLDGKIRLYSKTSMRQAKTAFPGLGSPITHV 469 (634)
Q Consensus 391 D~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASG-S~DGtIRLWD~~t~r~akt~L~GH~d~ItsV 469 (634)
|+..... ...... .-....+++++++|.|.++ ..++.|++||..+.. .......+...+.+|
T Consensus 177 ~~~~~~~-~~~~~~---------------~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~-~~~~~~~~~~~p~~i 239 (270)
T 1rwi_B 177 EAESNNQ-VVLPFT---------------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT-STVLPFTGLNTPLAV 239 (270)
T ss_dssp CTTTCCE-EECCCS---------------SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC-CEECCCCSCSCEEEE
T ss_pred ecCCCce-Eeeccc---------------CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc-ceeeccCCCCCceeE
Confidence 9876432 111110 0123567899999976555 457899999987632 222222334678999
Q ss_pred EECCCCCEEEE-EcCCcEEEEEcc
Q 047036 470 DVTYDGKWILG-TTDTYLILICTL 492 (634)
Q Consensus 470 dfSpDGk~LlS-S~D~tIrLWD~~ 492 (634)
+|+|||+.+++ +.++.|++++..
T Consensus 240 ~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 240 AVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp EECTTCCEEEEEGGGTEEEEECCC
T ss_pred EECCCCCEEEEECCCCEEEEEcCC
Confidence 99999998788 778999999864
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.59 E-value=2.4e-06 Score=85.55 Aligned_cols=119 Identities=12% Similarity=0.150 Sum_probs=82.3
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCC---------eEEEEEcCCCCceEEecc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDN---------RLCQWDMRDRSGIVQNMV 403 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~---------tIklWD~R~~~~~Vq~l~ 403 (634)
..|++||+.+|+.++.+.. . .+ ..++|+|| | +++++..+. .|.+|| + +. ++.+.
T Consensus 152 ~~l~~~d~~~~~~~~~l~~-~-~~--~~~~~spd--------g-~~~~~~~~~~~~~~~~~~~l~~~d--~-~~-~~~l~ 214 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEK-P-RF--SSGIWHRD--------K-IVVNVPHREIIPQYFKFWDIYIWE--D-GK-EEKMF 214 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE-E-TT--CEEEEETT--------E-EEEEEECCCSSCCSSCCEEEEEEE--T-TE-EEEEE
T ss_pred ceEEEEECCCCeEEeeecC-C-Cc--ccccCCCC--------e-EEEEEecccccccccccccEEEeC--C-Cc-eEEec
Confidence 5799999999988677766 3 43 35599998 7 788886652 455555 3 33 23332
Q ss_pred cCCCCccccccccccccCcceEEEEECCCC-eEEEEECC--------CcEEEEeccccccccccccCCCCCeEE-EEECC
Q 047036 404 KGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLD--------GKIRLYSKTSMRQAKTAFPGLGSPITH-VDVTY 473 (634)
Q Consensus 404 gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~D--------GtIRLWD~~t~r~akt~L~GH~d~Its-VdfSp 473 (634)
.+ ..+.++ +|+| +||.++.+ ..|.+|| ++ +.+..+++|...|.+ +.|+
T Consensus 215 ~~----------------~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-~~~~l~~~~~~~~~~~~~~s- 272 (347)
T 2gop_A 215 EK----------------VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK-EVMGILDEVDRGVGQAKIKD- 272 (347)
T ss_dssp EE----------------ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS-CEEESSTTCCSEEEEEEEET-
T ss_pred cC----------------cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC-ceEeccccCCcccCCccEEc-
Confidence 11 122333 7888 78887755 4788888 44 355666778888987 9999
Q ss_pred CCCEEEE-EcCCcEEEEEcc
Q 047036 474 DGKWILG-TTDTYLILICTL 492 (634)
Q Consensus 474 DGk~LlS-S~D~tIrLWD~~ 492 (634)
|| .+++ +.++.++|| +.
T Consensus 273 dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 273 GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp TE-EEEEEEETTEEEEE-EE
T ss_pred Cc-EEEEEecCCcEEEE-Ec
Confidence 99 7776 889999999 74
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.58 E-value=1.1e-05 Score=77.92 Aligned_cols=146 Identities=10% Similarity=0.034 Sum_probs=94.1
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccC-CCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEE
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEK-DGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQ 389 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~-~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIkl 389 (634)
|..+.++++++++. + +.|++||..++. +..+.... ..+ .-++++|+ +.+.++...++.|.+
T Consensus 72 i~~~~~g~l~v~~~-~------~~i~~~d~~~~~-~~~~~~~~~~~p--~~i~~~~~--------g~l~v~~~~~~~i~~ 133 (270)
T 1rwi_B 72 LAVDGAGTVYVTDF-N------NRVVTLAAGSNN-QTVLPFDGLNYP--EGLAVDTQ--------GAVYVADRGNNRVVK 133 (270)
T ss_dssp EEECTTCCEEEEET-T------TEEEEECTTCSC-CEECCCCSCSSE--EEEEECTT--------CCEEEEEGGGTEEEE
T ss_pred eEECCCCCEEEEcC-C------CEEEEEeCCCce-EeeeecCCcCCC--cceEECCC--------CCEEEEECCCCEEEE
Confidence 33455666666665 3 589999988554 34443222 222 34588887 567777778899999
Q ss_pred EEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEE-ECCCcEEEEeccccccccccccCCCCCeEE
Q 047036 390 WDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVG-SLDGKIRLYSKTSMRQAKTAFPGLGSPITH 468 (634)
Q Consensus 390 WD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASG-S~DGtIRLWD~~t~r~akt~L~GH~d~Its 468 (634)
||....... ..... ......+++++++|.|.++ ..++.|++||..+.. .......+...+.+
T Consensus 134 ~~~~~~~~~-~~~~~---------------~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~-~~~~~~~~~~~p~~ 196 (270)
T 1rwi_B 134 LAAGSKTQT-VLPFT---------------GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN-QVVLPFTDITAPWG 196 (270)
T ss_dssp ECTTCCSCE-ECCCC---------------SCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC-EEECCCSSCCSEEE
T ss_pred EECCCceeE-eeccc---------------cCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc-eEeecccCCCCceE
Confidence 987653321 11100 0112356788998865544 567899999987643 22222333367899
Q ss_pred EEECCCCCEEEE-EcCCcEEEEEc
Q 047036 469 VDVTYDGKWILG-TTDTYLILICT 491 (634)
Q Consensus 469 VdfSpDGk~LlS-S~D~tIrLWD~ 491 (634)
|+++++|+..++ ..++.|.+||.
T Consensus 197 i~~d~~g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 197 IAVDEAGTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp EEECTTCCEEEEETTTSCEEEECT
T ss_pred EEECCCCCEEEEECCCCcEEEEcC
Confidence 999999987777 45789999985
No 196
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.58 E-value=6.2e-08 Score=101.57 Aligned_cols=146 Identities=10% Similarity=0.108 Sum_probs=74.1
Q ss_pred ceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCc
Q 047036 318 NMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSG 397 (634)
Q Consensus 318 ~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~ 397 (634)
.+|++++.| ++|+.||+.+|+++.++.. +.+. +. .+.++ +..+++++.|++|+.||+++++.
T Consensus 10 ~~v~~gs~d------g~v~a~d~~tG~~~W~~~~--~~~~-s~-p~~~~--------g~~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 10 TLLFVSTLD------GSLHAVSKRTGSIKWTLKE--DPVL-QV-PTHVE--------EPAFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp TEEEEEETT------SEEEEEETTTCCEEEEEEC--CCSC-CC-C-------------CCEEECTTTCCEEEC-----CC
T ss_pred CEEEEEcCC------CEEEEEECCCCCEEEEecC--CCce-ec-ceEcC--------CCEEEEeCCCCEEEEEECCCCce
Confidence 455555554 6899999999999999887 3331 22 33333 45788889999999999987654
Q ss_pred eEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCE
Q 047036 398 IVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKW 477 (634)
Q Consensus 398 ~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~ 477 (634)
+ ..+..+.. ......+ +...++.|++|+.|+.|+.||..+++ .+-.+..+. .+.++|+|..
T Consensus 72 ~-w~~~~~~~---------~~~~~sp----~~~~~~~v~~g~~dg~v~a~D~~tG~-~~w~~~~~~----~~~~~p~~~~ 132 (369)
T 2hz6_A 72 L-TKLPFTIP---------ELVQASP----CRSSDGILYMGKKQDIWYVIDLLTGE-KQQTLSSAF----ADSLSPSTSL 132 (369)
T ss_dssp S-EECSCCHH---------HHHTTCS----CC-----CCCCEEEEEEEEECCC---------------------------
T ss_pred e-eeeeccCc---------cccccCc----eEecCCEEEEEeCCCEEEEEECCCCc-EEEEecCCC----cccccccCCE
Confidence 2 23221100 0001111 11246688999999999999999885 555665543 2466788888
Q ss_pred EEE-EcCCcEEEEEcccccCCCCeeeee
Q 047036 478 ILG-TTDTYLILICTLFSDKDGKTKTGF 504 (634)
Q Consensus 478 LlS-S~D~tIrLWD~~~~~~~G~~~~gF 504 (634)
|++ +.|++|+.||+. +|+.+-.+
T Consensus 133 v~~~~~dg~v~a~d~~----tG~~~W~~ 156 (369)
T 2hz6_A 133 LYLGRTEYTITMYDTK----TRELRWNA 156 (369)
T ss_dssp EEEEEEEEEEECCCSS----SSSCCCEE
T ss_pred EEEEecCCEEEEEECC----CCCEEEeE
Confidence 887 889999999975 56654333
No 197
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.58 E-value=1.1e-06 Score=88.07 Aligned_cols=123 Identities=14% Similarity=0.038 Sum_probs=77.8
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC---------------------------C
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD---------------------------N 385 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D---------------------------~ 385 (634)
..|++||+.+|+..+....+. + ...+|+|| |+.|+.++.+ .
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~--~--~~~~wspd--------g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 152 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN--I--RSLEWNED--------SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKT 152 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE--E--EEEEECTT--------SSEEEEEEECCCC---------CCCC---------CEE
T ss_pred ceEEEEECCCCceEEEEcCCC--c--cceeECCC--------CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccc
Confidence 359999999998776655543 4 45599999 5677776643 6
Q ss_pred eEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCC-------cEEEEecccccccccc
Q 047036 386 RLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDG-------KIRLYSKTSMRQAKTA 458 (634)
Q Consensus 386 tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DG-------tIRLWD~~t~r~akt~ 458 (634)
.|++||+.++.. ++.+.. . .+.+++++|+|.+++++.++ ..+||.+.+++ . ..
T Consensus 153 ~l~~~d~~~~~~-~~~l~~----------------~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~-~-~~ 212 (347)
T 2gop_A 153 TFWIFDTESEEV-IEEFEK----------------P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK-E-EK 212 (347)
T ss_dssp EEEEEETTTTEE-EEEEEE----------------E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE-E-EE
T ss_pred eEEEEECCCCeE-EeeecC----------------C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCc-e-EE
Confidence 799999987532 233321 1 24567889999545565542 44555443432 3 33
Q ss_pred ccCCCCCeEEEEECCCCCEEEE-EcCC--------cEEEEE
Q 047036 459 FPGLGSPITHVDVTYDGKWILG-TTDT--------YLILIC 490 (634)
Q Consensus 459 L~GH~d~ItsVdfSpDGk~LlS-S~D~--------tIrLWD 490 (634)
|..+ ..+.++ ||||++|+. +.+. .|.+||
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC
Confidence 4444 556655 999999987 6443 466665
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.54 E-value=2.8e-05 Score=76.42 Aligned_cols=156 Identities=8% Similarity=0.035 Sum_probs=96.0
Q ss_pred eeEEeCCcceEEecCCCC---------CCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEe----cCCCCCCCCCCC
Q 047036 310 ALLMRGETNMMLMSPLKD---------GKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDIT----NDTKSSQLDPSE 376 (634)
Q Consensus 310 ~mL~~~D~~mllsss~d~---------~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfs----Pd~K~~q~~~g~ 376 (634)
.+..+.++++++++..+. .......|+.||.. |++...... .... .-++|+ |+ ++
T Consensus 121 ~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~-~~~~--~~i~~~~~~d~d--------g~ 188 (314)
T 1pjx_A 121 DCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA-FQFP--NGIAVRHMNDGR--------PY 188 (314)
T ss_dssp EEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE-ESSE--EEEEEEECTTSC--------EE
T ss_pred CEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC-CCCc--ceEEEecccCCC--------CC
Confidence 344556666666654320 00011468889987 776554332 2222 344888 87 44
Q ss_pred EE-EEEeCCCeEEEEEcCCCCce-----EEecccCCCCccccccccccccCcceEEEEECCCCeEEE-EECCCcEEEEec
Q 047036 377 ST-FLGLDDNRLCQWDMRDRSGI-----VQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVV-GSLDGKIRLYSK 449 (634)
Q Consensus 377 ~l-aSGS~D~tIklWD~R~~~~~-----Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IAS-GS~DGtIRLWD~ 449 (634)
.+ ++...++.|.+||+...+.+ +..+.++. ......++++++|.|.+ ...++.|.+||.
T Consensus 189 ~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~--------------~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 189 QLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH--------------EGGADGMDFDEDNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp EEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS--------------SCEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred EEEEEECCCCeEEEEECCCCCccccceEEEECCCCC--------------CCCCCceEECCCCCEEEEEcCCCEEEEEcC
Confidence 44 45567899999998622221 11111000 01245688899996554 457889999998
Q ss_pred cccccccccccCCCCCeEEEEECCCCCEEEE-E-cCCcEEEEEcc
Q 047036 450 TSMRQAKTAFPGLGSPITHVDVTYDGKWILG-T-TDTYLILICTL 492 (634)
Q Consensus 450 ~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S-~D~tIrLWD~~ 492 (634)
.+++ ....+..+...+.+|+|+|||++|.. + .++.|..|++.
T Consensus 255 ~~g~-~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 255 DGGQ-PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp TCBS-CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCc-EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 7543 45556666678999999999996655 3 35689999864
No 199
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.51 E-value=0.0004 Score=67.12 Aligned_cols=146 Identities=12% Similarity=0.127 Sum_probs=95.4
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEec--cCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEE
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKF--EKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLC 388 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkg--H~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIk 388 (634)
|..+.+++++++...+ +.|+++|.. |+.. .+.. +... +..+++.|+ +.+.++...++.|.
T Consensus 67 i~~~~~g~l~v~~~~~------~~v~~~d~~-g~~~-~~~~~~~~~~--~~~i~~~~~--------g~l~v~~~~~~~i~ 128 (300)
T 2qc5_A 67 LIVSSLGDIWFTENGA------NKIGKLSKK-GGFT-EYPLPQPDSG--PYGITEGLN--------GDIWFTQLNGDRIG 128 (300)
T ss_dssp EEECTTSCEEEEETTT------TEEEEECTT-SCEE-EEECSSTTCC--EEEEEECST--------TCEEEEETTTTEEE
T ss_pred EEECCCCCEEEEecCC------CeEEEECCC-CCeE-EecCCCCCCC--CccceECCC--------CCEEEEccCCCeEE
Confidence 3445667777766543 579999998 8764 4432 2222 244577776 56777777789999
Q ss_pred EEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEE-CCCcEEEEeccccccccccccCCCCCeE
Q 047036 389 QWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGS-LDGKIRLYSKTSMRQAKTAFPGLGSPIT 467 (634)
Q Consensus 389 lWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS-~DGtIRLWD~~t~r~akt~L~GH~d~It 467 (634)
++|+. +. . ..+.... ......++++.++|.|.++. ..+.|..||.. ++.....++++...+.
T Consensus 129 ~~~~~-g~-~-~~~~~~~-------------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~ 191 (300)
T 2qc5_A 129 KLTAD-GT-I-YEYDLPN-------------KGSYPAFITLGSDNALWFTENQNNSIGRITNT-GKLEEYPLPTNAAAPV 191 (300)
T ss_dssp EECTT-SC-E-EEEECSS-------------TTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEE
T ss_pred EECCC-CC-E-EEccCCC-------------CCCCceeEEECCCCCEEEEecCCCeEEEECCC-CcEEEeeCCCCCCCcc
Confidence 99987 33 2 2221000 11235678889999766555 47899999983 3322233455667799
Q ss_pred EEEECCCCCEEEEE-cCCcEEEEEc
Q 047036 468 HVDVTYDGKWILGT-TDTYLILICT 491 (634)
Q Consensus 468 sVdfSpDGk~LlSS-~D~tIrLWD~ 491 (634)
+|+++++|+..+++ ..+.|.+||.
T Consensus 192 ~i~~d~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 192 GITSGNDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp EEEECTTSSEEEEETTTTEEEEECT
T ss_pred eEEECCCCCEEEEccCCCEEEEEcC
Confidence 99999999988884 4667999984
No 200
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.51 E-value=9.6e-05 Score=71.57 Aligned_cols=147 Identities=10% Similarity=0.047 Sum_probs=95.0
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEE-EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEE
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTE-WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQ 389 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~-lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIkl 389 (634)
+..+.++++.++...+ +.|.+||.. |+...- +..+...+ ..+++.++ +.+.++...++.|.+
T Consensus 25 i~~d~~g~l~v~~~~~------~~v~~~~~~-~~~~~~~~~~~~~~~--~~i~~~~~--------g~l~v~~~~~~~v~~ 87 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKA------NKISSLDQS-GRIKEFEVPTPDAKV--MCLIVSSL--------GDIWFTENGANKIGK 87 (300)
T ss_dssp EEECTTSCEEEEETTT------TEEEEECTT-SCEEEEECSSTTCCE--EEEEECTT--------SCEEEEETTTTEEEE
T ss_pred eeECCCCCEEEEcCCC------CeEEEECCC-CceEEEECCCCCCcc--eeEEECCC--------CCEEEEecCCCeEEE
Confidence 3445666766766543 589999998 776542 22222222 34467776 566666666899999
Q ss_pred EEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEE-CCCcEEEEeccccccccccccCCCCCeEE
Q 047036 390 WDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGS-LDGKIRLYSKTSMRQAKTAFPGLGSPITH 468 (634)
Q Consensus 390 WD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS-~DGtIRLWD~~t~r~akt~L~GH~d~Its 468 (634)
+|+. +. . ..+.... ......++++.++|.|.++. .++.|..||.. ++.....++.....+.+
T Consensus 88 ~d~~-g~-~-~~~~~~~-------------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~ 150 (300)
T 2qc5_A 88 LSKK-GG-F-TEYPLPQ-------------PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAF 150 (300)
T ss_dssp ECTT-SC-E-EEEECSS-------------TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEE
T ss_pred ECCC-CC-e-EEecCCC-------------CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCcee
Confidence 9987 43 2 2221000 11235788889899665555 47899999987 33222345555678999
Q ss_pred EEECCCCCEEEEE-cCCcEEEEEc
Q 047036 469 VDVTYDGKWILGT-TDTYLILICT 491 (634)
Q Consensus 469 VdfSpDGk~LlSS-~D~tIrLWD~ 491 (634)
|++.++|+..+++ ..+.|..+|.
T Consensus 151 i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 151 ITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp EEECTTSSEEEEETTTTEEEEECT
T ss_pred EEECCCCCEEEEecCCCeEEEECC
Confidence 9999999977774 4678888884
No 201
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.47 E-value=8.8e-07 Score=95.20 Aligned_cols=144 Identities=10% Similarity=0.069 Sum_probs=98.3
Q ss_pred ccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCc-----------EEEEEeccCCCcceeEEEEecCCCCCCC
Q 047036 304 NSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGK-----------IVTEWKFEKDGTDITMRDITNDTKSSQL 372 (634)
Q Consensus 304 ~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK-----------~V~~lkgH~~~V~I~vvsfsPd~K~~q~ 372 (634)
-|+|...+.......++++++.+ .+++|++...+ ..... .+.. | ..++| |
T Consensus 36 ~~~~~nlLais~~~gll~a~~~~-------~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V--~~l~f--d------ 96 (388)
T 1xip_A 36 PFASLQNLDISNSKSLFVAASGS-------KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-V--IFVCF--H------ 96 (388)
T ss_dssp CSSCCBCEEEETTTTEEEEEETT-------EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-E--EEEEE--E------
T ss_pred CcccccEEEEcCCCCEEEEeCCC-------EEEEEEhhHhhhhhccccccccceEEe-eCCC-e--eEEEE--C------
Confidence 35567777777888888888764 58899966443 11122 2444 5 45688 5
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEecccc
Q 047036 373 DPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSM 452 (634)
Q Consensus 373 ~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~ 452 (634)
+..|++| .++.|++||++...+ ...+..|.. .+.++.+.+. .+|+++.||+|.+||+..+
T Consensus 97 --~~~L~v~-~~~~l~v~dv~sl~~-~~~~~~~~~---------------~v~~i~~~~p-~~av~~~dG~L~v~dl~~~ 156 (388)
T 1xip_A 97 --GDQVLVS-TRNALYSLDLEELSE-FRTVTSFEK---------------PVFQLKNVNN-TLVILNSVNDLSALDLRTK 156 (388)
T ss_dssp --TTEEEEE-ESSEEEEEESSSTTC-EEEEEECSS---------------CEEEEEECSS-EEEEEETTSEEEEEETTTC
T ss_pred --CCEEEEE-cCCcEEEEEchhhhc-cCccceeec---------------ceeeEEecCC-CEEEEECCCCEEEEEccCC
Confidence 5789988 889999999987543 223322222 2334333332 4999999999999998764
Q ss_pred ccccccccCCCCCeEEEEECCCCCEEEEEcCCcEEEEEcc
Q 047036 453 RQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTL 492 (634)
Q Consensus 453 r~akt~L~GH~d~ItsVdfSpDGk~LlSS~D~tIrLWD~~ 492 (634)
+ ... +...|+++++||+| ..+...|++|++|+..
T Consensus 157 ~-~~~----~~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~ 190 (388)
T 1xip_A 157 S-TKQ----LAQNVTSFDVTNSQ-LAVLLKDRSFQSFAWR 190 (388)
T ss_dssp C-EEE----EEESEEEEEECSSE-EEEEETTSCEEEEEEE
T ss_pred c-ccc----ccCCceEEEEcCCc-eEEEEcCCcEEEEcCC
Confidence 3 322 56789999999999 3444889999999754
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.42 E-value=1e-05 Score=91.86 Aligned_cols=109 Identities=13% Similarity=0.186 Sum_probs=74.2
Q ss_pred eEEEEecCCCCCCCCCCCEEEEEeCC-----CeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC
Q 047036 359 TMRDITNDTKSSQLDPSESTFLGLDD-----NRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG 433 (634)
Q Consensus 359 ~vvsfsPd~K~~q~~~g~~laSGS~D-----~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG 433 (634)
...+|||| |+.||.++++ .+|++||+.++.. +.... ....+..++++||.
T Consensus 166 ~~~~~SPD--------G~~la~~~~~~G~e~~~i~v~dl~tg~~-~~~~~----------------~~~~~~~~~wspD~ 220 (741)
T 1yr2_A 166 DAWAASDD--------GRLLAYSVQDGGSDWRTVKFVGVADGKP-LADEL----------------KWVKFSGLAWLGND 220 (741)
T ss_dssp EEEEECTT--------SSEEEEEEEETTCSEEEEEEEETTTCCE-EEEEE----------------EEEESCCCEESTTS
T ss_pred EeEEECCC--------CCEEEEEEcCCCCceEEEEEEECCCCCC-CCccC----------------CCceeccEEEECCC
Confidence 45699999 6677777655 5799999998653 22110 01123456788886
Q ss_pred eEEEEECCCc--------------EEEEecccccc---ccccccCCCCCeEEEEECCCCCEEEE-EcC-----CcEEEEE
Q 047036 434 SIVVGSLDGK--------------IRLYSKTSMRQ---AKTAFPGLGSPITHVDVTYDGKWILG-TTD-----TYLILIC 490 (634)
Q Consensus 434 ~IASGS~DGt--------------IRLWD~~t~r~---akt~L~GH~d~ItsVdfSpDGk~LlS-S~D-----~tIrLWD 490 (634)
.|+.++.|+. |++|++.+... .....++|...+.++.|||||++|+. +.+ +.|.+||
T Consensus 221 ~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d 300 (741)
T 1yr2_A 221 ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVAR 300 (741)
T ss_dssp EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEE
T ss_pred EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEE
Confidence 6888887765 99999866431 11222344446999999999999997 544 3799999
Q ss_pred cc
Q 047036 491 TL 492 (634)
Q Consensus 491 ~~ 492 (634)
+.
T Consensus 301 ~~ 302 (741)
T 1yr2_A 301 VT 302 (741)
T ss_dssp EE
T ss_pred CC
Confidence 75
No 203
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.39 E-value=7.9e-05 Score=73.22 Aligned_cols=134 Identities=13% Similarity=0.039 Sum_probs=82.2
Q ss_pred CcEEEEeCCCCcEEEEEe----ccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEec-ccCCC
Q 047036 333 PGVQQLDIETGKIVTEWK----FEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNM-VKGDS 407 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lk----gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l-~gh~s 407 (634)
+.|++||+.+|++..-.. ++...+ ..++++|+ +..++.+...+.|.+||+. +. . ..+ .....
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~--~~i~~~~~--------~g~l~v~~~~~~l~~~d~~-g~-~-~~~~~~~~~ 112 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIP--AGCQCDRD--------ANQLFVADMRLGLLVVQTD-GT-F-EEIAKKDSE 112 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCE--EEEEECSS--------SSEEEEEETTTEEEEEETT-SC-E-EECCSBCTT
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCC--ceEEEecC--------CCcEEEEECCCCEEEEeCC-CC-E-EEEEeccCC
Confidence 689999999998754322 243433 33477776 2356666666689999997 43 2 233 21100
Q ss_pred CccccccccccccCcceEEEEECCCCeEEEEEC-C---------------CcEEEEeccccccccccccCCCCCeEEEEE
Q 047036 408 PVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSL-D---------------GKIRLYSKTSMRQAKTAFPGLGSPITHVDV 471 (634)
Q Consensus 408 ~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~-D---------------GtIRLWD~~t~r~akt~L~GH~d~ItsVdf 471 (634)
+ .......+++++++|.|.+++. + +.|..||.. ++ ... +..+.....++++
T Consensus 113 -------~---~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~-~~~~~~~~~~i~~ 179 (314)
T 1pjx_A 113 -------G---RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-MIQ-VDTAFQFPNGIAV 179 (314)
T ss_dssp -------S---CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC-EEE-EEEEESSEEEEEE
T ss_pred -------C---ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC-EEE-eccCCCCcceEEE
Confidence 0 0112356788999996655543 3 567777754 32 222 2233345689999
Q ss_pred C----CCCCEEE-E-EcCCcEEEEEcc
Q 047036 472 T----YDGKWIL-G-TTDTYLILICTL 492 (634)
Q Consensus 472 S----pDGk~Ll-S-S~D~tIrLWD~~ 492 (634)
+ |||++|. + +.++.|.+||..
T Consensus 180 ~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 180 RHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp EECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred ecccCCCCCEEEEEECCCCeEEEEECC
Confidence 9 9997654 4 467899999964
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.37 E-value=4.3e-05 Score=86.69 Aligned_cols=133 Identities=12% Similarity=0.049 Sum_probs=84.5
Q ss_pred CcEEEEeCCCCc----EEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC-----CeEEEEEcCCCCce-EEec
Q 047036 333 PGVQQLDIETGK----IVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD-----NRLCQWDMRDRSGI-VQNM 402 (634)
Q Consensus 333 ~TIrlWDleTGK----~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D-----~tIklWD~R~~~~~-Vq~l 402 (634)
..|++|++.+++ ++.....|...+ ....|+|| |+.|+..+.+ ..|++||+.++... .+.+
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~--~~~~~SpD--------G~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l 312 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRG--HGASVSSD--------GRWVVITSSEGTDPVNTVHVARVTNGKIGPVTAL 312 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCE--EEEEECTT--------SCEEEEEEECTTCSCCEEEEEEEETTEECCCEEE
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEE--EEEEECCC--------CCEEEEEEEccCCCcceEEEEECCCCCCcccEEe
Confidence 469999999886 333333343333 34589999 5667766654 48999999865211 2344
Q ss_pred ccCCCCccccccccccccCcceEEEEECCCC-eEEEEECC----CcEEEEecccc-ccccccccCCCCCeEEEEECCCCC
Q 047036 403 VKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLD----GKIRLYSKTSM-RQAKTAFPGLGSPITHVDVTYDGK 476 (634)
Q Consensus 403 ~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~D----GtIRLWD~~t~-r~akt~L~GH~d~ItsVdfSpDGk 476 (634)
..+... .... .+ ++| .|+..+.+ +.|.+||+.+. ......++++...|.+++++ ++.
T Consensus 313 ~~~~~~--------------~~~~-~~-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~ 375 (741)
T 1yr2_A 313 IPDLKA--------------QWDF-VD-GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNR 375 (741)
T ss_dssp ECSSSS--------------CEEE-EE-EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTE
T ss_pred cCCCCc--------------eEEE-Ee-ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCE
Confidence 322211 1222 23 555 78877764 45999998763 13456677777778888888 556
Q ss_pred EEEE-EcCCcEEEEEcc
Q 047036 477 WILG-TTDTYLILICTL 492 (634)
Q Consensus 477 ~LlS-S~D~tIrLWD~~ 492 (634)
.+++ ..|+..+||...
T Consensus 376 lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 376 LFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEEEEEETTEEEEEEEE
T ss_pred EEEEEEECCEEEEEEEe
Confidence 6666 779998888754
No 205
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.36 E-value=0.00018 Score=69.64 Aligned_cols=148 Identities=6% Similarity=0.010 Sum_probs=97.4
Q ss_pred eeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEE-EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEE
Q 047036 310 ALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTE-WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLC 388 (634)
Q Consensus 310 ~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~-lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIk 388 (634)
.+..+.++++++++... +.|++||. +|++... +..+...+ ..++++|+ +.+.++...++.|.
T Consensus 145 ~i~~~~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~~~--~~i~~~~~--------g~l~v~~~~~~~i~ 207 (299)
T 2z2n_A 145 FITLGSDNALWFTENQN------NAIGRITE-SGDITEFKIPTPASGP--VGITKGND--------DALWFVEIIGNKIG 207 (299)
T ss_dssp EEEECTTSCEEEEETTT------TEEEEECT-TCCEEEEECSSTTCCE--EEEEECTT--------SSEEEEETTTTEEE
T ss_pred eEEEcCCCCEEEEeCCC------CEEEEEcC-CCcEEEeeCCCCCCcc--eeEEECCC--------CCEEEEccCCceEE
Confidence 34455666777766443 58999999 8887653 22222222 34477776 56666666789999
Q ss_pred EEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEE-CCCcEEEEeccccccccccccCCCCCeE
Q 047036 389 QWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGS-LDGKIRLYSKTSMRQAKTAFPGLGSPIT 467 (634)
Q Consensus 389 lWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS-~DGtIRLWD~~t~r~akt~L~GH~d~It 467 (634)
+||+ ++. +..+... .......+++++++|.|.++. .++.|..||..+ +.....++++...+.
T Consensus 208 ~~~~-~g~--~~~~~~~-------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g-~~~~~~~~~~~~~~~ 270 (299)
T 2z2n_A 208 RITT-SGE--ITEFKIP-------------TPNARPHAITAGAGIDLWFTEWGANKIGRLTSNN-IIEEYPIQIKSAEPH 270 (299)
T ss_dssp EECT-TCC--EEEEECS-------------STTCCEEEEEECSTTCEEEEETTTTEEEEEETTT-EEEEEECSSSSCCEE
T ss_pred EECC-CCc--EEEEECC-------------CCCCCceeEEECCCCCEEEeccCCceEEEECCCC-ceEEEeCCCCCCccc
Confidence 9999 543 2222100 011235788999999776665 678999999843 322233566778899
Q ss_pred EEEECCCCCEEEEEcCCcEEEEEcc
Q 047036 468 HVDVTYDGKWILGTTDTYLILICTL 492 (634)
Q Consensus 468 sVdfSpDGk~LlSS~D~tIrLWD~~ 492 (634)
+|++ ++|+..+++..+.|..++..
T Consensus 271 ~i~~-~~g~l~v~~~~~~l~~~~~~ 294 (299)
T 2z2n_A 271 GICF-DGETIWFAMECDKIGKLTLI 294 (299)
T ss_dssp EEEE-CSSCEEEEETTTEEEEEEEC
T ss_pred eEEe-cCCCEEEEecCCcEEEEEcC
Confidence 9999 99998888656777777753
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.36 E-value=1.2e-05 Score=90.99 Aligned_cols=134 Identities=10% Similarity=0.022 Sum_probs=85.4
Q ss_pred CcEEEEeCCCCcEEEE-EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCe-------------EEEEEcCCCCc-
Q 047036 333 PGVQQLDIETGKIVTE-WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNR-------------LCQWDMRDRSG- 397 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~-lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~t-------------IklWD~R~~~~- 397 (634)
.+|++||++||+.+.. +.+... ..++|+ | ++.|+.++.+.. |++|++.+...
T Consensus 155 ~~i~v~dl~tg~~~~~~~~~~k~----~~~~Ws-D--------g~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~ 221 (693)
T 3iuj_A 155 REIHLMDVESKQPLETPLKDVKF----SGISWL-G--------NEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQED 221 (693)
T ss_dssp EEEEEEETTTCSEEEEEEEEEES----CCCEEE-T--------TTEEEEEESSCCC-------CCCCEEEEEETTSCGGG
T ss_pred EEEEEEECCCCCCCccccCCcee----ccEEEe-C--------CCEEEEEEecCcccccccccCCCcEEEEEECCCCccc
Confidence 6899999999997764 333311 234899 8 567888888754 99999876532
Q ss_pred eEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEE-E---CCCcEEEEeccccccccccccCCCCCeEEEEEC
Q 047036 398 IVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVG-S---LDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVT 472 (634)
Q Consensus 398 ~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASG-S---~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfS 472 (634)
.+..+... . . ....+..+++|+|| +|+.. + ..+.|++||+.+.......|..+.+.+... ++
T Consensus 222 ~~~v~~~~---------~--~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~ 288 (693)
T 3iuj_A 222 DRLVFGAI---------P--A-QHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VD 288 (693)
T ss_dssp CEEEESCS---------G--G-GCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EE
T ss_pred ceEEEecC---------C--C-CCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Ee
Confidence 11111100 0 0 01124567889999 55443 3 235899999876422345566677777766 88
Q ss_pred CCCCEEEE-EcC----CcEEEEEcc
Q 047036 473 YDGKWILG-TTD----TYLILICTL 492 (634)
Q Consensus 473 pDGk~LlS-S~D----~tIrLWD~~ 492 (634)
++|.+|+. +.. ..|.+||+.
T Consensus 289 ~~g~~l~~~t~~~~~~~~l~~~d~~ 313 (693)
T 3iuj_A 289 NKGSTLYLLTNRDAPNRRLVTVDAA 313 (693)
T ss_dssp EETTEEEEEECTTCTTCEEEEEETT
T ss_pred ccCCEEEEEECCCCCCCEEEEEeCC
Confidence 89988876 543 467788864
No 207
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.36 E-value=4.7e-05 Score=78.08 Aligned_cols=173 Identities=8% Similarity=0.014 Sum_probs=102.9
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCC------CcceeEEEEecCCCCCCCCCCCEEE
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKD------GTDITMRDITNDTKSSQLDPSESTF 379 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~------~V~I~vvsfsPd~K~~q~~~g~~la 379 (634)
.|.+ +.++.++++++++.... ...+..|.+||+.+|++++++..+.. .+ .-++|+|+. +...+
T Consensus 68 ~p~g-v~~d~~g~L~v~D~g~~-~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~--~~v~vd~~~-------g~~yv 136 (343)
T 2qe8_A 68 TVLG-IKSDGNGIVWMLDNGNQ-SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFV--NDLAVDLIH-------NFVYI 136 (343)
T ss_dssp CEEE-EEECSSSEEEEEECHHH-HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCC--CEEEEETTT-------TEEEE
T ss_pred EeeE-EEEcCCCcEEEEcCCCC-cCCCCeEEEEECCCCeEEEEEECChhhccccccc--ceEEEecCC-------CEEEE
Confidence 3443 33455556666553210 00025799999999999998875421 22 234778751 33445
Q ss_pred EEe---CCCeEEEEEcCCCCceEEecccCCCC----ccccccccccc----------cCcceEEEEECCCC-eEEEEECC
Q 047036 380 LGL---DDNRLCQWDMRDRSGIVQNMVKGDSP----VLHWTQGHQFS----------RGTNFQCFASTGDG-SIVVGSLD 441 (634)
Q Consensus 380 SGS---~D~tIklWD~R~~~~~Vq~l~gh~s~----V~~~~~g~~y~----------~~~~fssva~s~dG-~IASGS~D 441 (634)
+.+ .+++|.+||+.++. ....+.+|... +..+..+..+. .......++++++| .|+++...
T Consensus 137 td~~~~~~~~i~v~d~~~g~-~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~ 215 (343)
T 2qe8_A 137 SDPAPDDKAALIRVDLQTGL-AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH 215 (343)
T ss_dssp EECCSGGGCEEEEEETTTCC-EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS
T ss_pred EcCccCCCCeEEEEECCCCC-EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC
Confidence 655 68999999998654 44555544221 11111122111 11224678999999 68888877
Q ss_pred CcEEEEecccc--c-------cccc--cccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEc
Q 047036 442 GKIRLYSKTSM--R-------QAKT--AFPGLGSPITHVDVTYDGKWILG-TTDTYLILICT 491 (634)
Q Consensus 442 GtIRLWD~~t~--r-------~akt--~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~ 491 (634)
+. +||.+... + +... ...|+.....+|+++++|+..++ ...+.|.+||.
T Consensus 216 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 216 ST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp CS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred CC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 74 56654321 0 0001 12244445678999999999999 78899999996
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.31 E-value=8.3e-05 Score=74.54 Aligned_cols=132 Identities=11% Similarity=-0.027 Sum_probs=83.7
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
+.|++||. +|+ +..|..+...+ ..++++|+ |+++++...++.|.+||+. +. +..+..+..
T Consensus 67 ~~i~~~~~-~g~-~~~~~~~~~~~--~gl~~d~d--------G~l~v~~~~~~~v~~~~~~-g~--~~~~~~~~~----- 126 (305)
T 3dr2_A 67 RRVLGWRE-DGT-VDVLLDATAFT--NGNAVDAQ--------QRLVHCEHGRRAITRSDAD-GQ--AHLLVGRYA----- 126 (305)
T ss_dssp TEEEEEET-TSC-EEEEEESCSCE--EEEEECTT--------SCEEEEETTTTEEEEECTT-SC--EEEEECEET-----
T ss_pred CEEEEEeC-CCC-EEEEeCCCCcc--ceeeECCC--------CCEEEEECCCCEEEEECCC-CC--EEEEEeccC-----
Confidence 68999998 576 45666666544 45588887 5666665567899999986 32 233321100
Q ss_pred ccccccccCcceEEEEECCCCeEEE-----EEC-------------CCcEEEEeccccccccccccCCCCCeEEEEECCC
Q 047036 413 TQGHQFSRGTNFQCFASTGDGSIVV-----GSL-------------DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYD 474 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~dG~IAS-----GS~-------------DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpD 474 (634)
+. .......++++++|.|.. |.. .+.|..||..+++ ..... ......+|+|+||
T Consensus 127 --~~---~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~-~~~~~--~~~~p~gl~~spd 198 (305)
T 3dr2_A 127 --GK---RLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP-LQRMA--DLDHPNGLAFSPD 198 (305)
T ss_dssp --TE---ECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC-CEEEE--EESSEEEEEECTT
T ss_pred --CC---ccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc-EEEEe--cCCCCcceEEcCC
Confidence 11 112235678899996655 432 3568888876543 33222 3345689999999
Q ss_pred CCEEEE-EcC------CcEEEEEcc
Q 047036 475 GKWILG-TTD------TYLILICTL 492 (634)
Q Consensus 475 Gk~LlS-S~D------~tIrLWD~~ 492 (634)
|++|.. ... +.|.+|++.
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEE
T ss_pred CCEEEEEecCCcCCCCCEEEEEEec
Confidence 997765 444 689999864
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.31 E-value=0.00014 Score=77.37 Aligned_cols=165 Identities=10% Similarity=0.031 Sum_probs=101.7
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEE----eccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCe
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEW----KFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNR 386 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~l----kgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~t 386 (634)
+.++.++++|+.+..+. ...|++||..++..++.+ ..+...+ .-++|+|+ +..|+.+..+++
T Consensus 176 ia~~~~g~~l~~~d~~~----~~~I~~~d~~~~~~~~~~g~~~~~~~~~p--~~iav~p~--------~g~lyv~d~~~~ 241 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEG----THTVYVYMKASGWAPTRIGQLGSTFSGKI--GAVALDET--------EEWLYFVDSNKN 241 (409)
T ss_dssp CEECTTSSEEEEEBSST----TCEEEEEEGGGTTCEEEEEECCTTSCSCC--CBCEECTT--------SSEEEEECTTCE
T ss_pred eeEecCCCcEEEEecCC----CceEEEEEcCCCceeEEeeeccchhcCCc--EEEEEeCC--------CCeEEEEECCCc
Confidence 44556666665554432 128999999888765555 2122332 23488885 245666777899
Q ss_pred EEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECC-CCeE-EEEECCCcEEEEeccccccccccccCCC-
Q 047036 387 LCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSI-VVGSLDGKIRLYSKTSMRQAKTAFPGLG- 463 (634)
Q Consensus 387 IklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~I-ASGS~DGtIRLWD~~t~r~akt~L~GH~- 463 (634)
|++||+..+.. ..+.+... .+.. ...+++.++++| +|+| ++-+..+.|+.||..+. ..++.|+.
T Consensus 242 I~~~d~~~~~~--~~~~~~~~------~g~~--~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~ 308 (409)
T 3hrp_A 242 FGRFNVKTQEV--TLIKQLEL------SGSL--GTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSAT 308 (409)
T ss_dssp EEEEETTTCCE--EEEEECCC------CSCC--CCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTT
T ss_pred EEEEECCCCCE--EEEecccc------cCCC--CCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCC
Confidence 99999986542 22211000 0100 111233788888 5765 55567899999997642 22333332
Q ss_pred --------------CCeEEEEECCCCCEEEE-E-cCCcEEEEEcccccCCCCeeeeecCC
Q 047036 464 --------------SPITHVDVTYDGKWILG-T-TDTYLILICTLFSDKDGKTKTGFSGR 507 (634)
Q Consensus 464 --------------d~ItsVdfSpDGk~LlS-S-~D~tIrLWD~~~~~~~G~~~~gF~gh 507 (634)
....+|+|+|||+.+++ + ..+.|+.|++. +|. +..+.|+
T Consensus 309 ~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~----~G~-v~~~~g~ 363 (409)
T 3hrp_A 309 QKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDIL----DGY-VSTVAGQ 363 (409)
T ss_dssp CCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETT----TTE-EEEEEEC
T ss_pred CCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECC----CCE-EEEEeCC
Confidence 34789999999998888 7 88999999953 344 4455554
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.24 E-value=3.8e-05 Score=81.80 Aligned_cols=154 Identities=8% Similarity=0.015 Sum_probs=100.0
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCC
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDN 385 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~ 385 (634)
.|..+ .++.++++++++..+ +.|++||+.+|++...+.+... . . ++|+|+ ++.|+++..++
T Consensus 132 ~P~~l-a~d~~g~lyv~d~~~------~~I~~id~~~g~~~~~~~~~~~--~-~-ia~~~~--------g~~l~~~d~~~ 192 (409)
T 3hrp_A 132 YMWGI-AAVGNNTVLAYQRDD------PRVRLISVDDNKVTTVHPGFKG--G-K-PAVTKD--------KQRVYSIGWEG 192 (409)
T ss_dssp CEEEE-EECSTTEEEEEETTT------TEEEEEETTTTEEEEEEETCCB--C-B-CEECTT--------SSEEEEEBSST
T ss_pred CceEE-EEeCCCCEEEEecCC------CcEEEEECCCCEEEEeeccCCC--C-c-eeEecC--------CCcEEEEecCC
Confidence 46554 455777877777653 6899999998877665554322 1 3 589998 67888888765
Q ss_pred --eEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEEECCCcEEEEecccccccccc----
Q 047036 386 --RLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVGSLDGKIRLYSKTSMRQAKTA---- 458 (634)
Q Consensus 386 --tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASGS~DGtIRLWD~~t~r~akt~---- 458 (634)
.|.+||...+.. ...+..... + ......++++++ +|.|+++..++.|+.||..+.. ....
T Consensus 193 ~~~I~~~d~~~~~~-~~~~g~~~~--------~---~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~-~~~~~~~~ 259 (409)
T 3hrp_A 193 THTVYVYMKASGWA-PTRIGQLGS--------T---FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE-VTLIKQLE 259 (409)
T ss_dssp TCEEEEEEGGGTTC-EEEEEECCT--------T---SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC-EEEEEECC
T ss_pred CceEEEEEcCCCce-eEEeeeccc--------h---hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC-EEEEeccc
Confidence 899999875432 222200000 0 011235678888 7888888888999999987642 2221
Q ss_pred ccCCCCCe--EEEEECCC-CCEEEE-EcCCcEEEEEc
Q 047036 459 FPGLGSPI--THVDVTYD-GKWILG-TTDTYLILICT 491 (634)
Q Consensus 459 L~GH~d~I--tsVdfSpD-Gk~LlS-S~D~tIrLWD~ 491 (634)
..++...- .+|+|+|+ |..+++ +..++|+.|+.
T Consensus 260 ~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 260 LSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp CCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred ccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 22333222 39999995 555566 67889999984
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.17 E-value=0.00084 Score=68.31 Aligned_cols=130 Identities=15% Similarity=0.056 Sum_probs=79.4
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
+.|++||+.+|+. +.+.. ...| ..+.++|+ +.+++ ++ ...|.+||+.++. +..+.....
T Consensus 71 ~~i~~~d~~~~~~-~~~~~-~~~v--~~i~~~~d--------g~l~v-~~-~~gl~~~d~~~g~--~~~~~~~~~----- 129 (326)
T 2ghs_A 71 RELHELHLASGRK-TVHAL-PFMG--SALAKISD--------SKQLI-AS-DDGLFLRDTATGV--LTLHAELES----- 129 (326)
T ss_dssp TEEEEEETTTTEE-EEEEC-SSCE--EEEEEEET--------TEEEE-EE-TTEEEEEETTTCC--EEEEECSST-----
T ss_pred CEEEEEECCCCcE-EEEEC-CCcc--eEEEEeCC--------CeEEE-EE-CCCEEEEECCCCc--EEEEeeCCC-----
Confidence 6899999998765 44543 2333 45578887 44555 44 4469999998754 223321100
Q ss_pred ccccccccCcceEEEEECCCCeEEEEECC-------CcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE--EcC
Q 047036 413 TQGHQFSRGTNFQCFASTGDGSIVVGSLD-------GKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG--TTD 483 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~dG~IASGS~D-------GtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS--S~D 483 (634)
+ .....+..++++++|.|.+++.. +.|..+| +++ ... +..+.....+++|+|||++|.. +.+
T Consensus 130 --~---~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~-~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 130 --D---LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK-VTK-LFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp --T---CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE-EEE-EEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred --C---CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc-EEE-eeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 0 01234678899999976665532 3455555 332 322 3223345789999999997754 457
Q ss_pred CcEEEEEcc
Q 047036 484 TYLILICTL 492 (634)
Q Consensus 484 ~tIrLWD~~ 492 (634)
+.|.+||+.
T Consensus 201 ~~I~~~d~~ 209 (326)
T 2ghs_A 201 NRLMRVPLD 209 (326)
T ss_dssp CEEEEEEBC
T ss_pred CEEEEEEcc
Confidence 889999963
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.04 E-value=0.00019 Score=77.14 Aligned_cols=135 Identities=11% Similarity=-0.034 Sum_probs=86.1
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe----------CCCeEEEEEcCCCCceEEec
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL----------DDNRLCQWDMRDRSGIVQNM 402 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS----------~D~tIklWD~R~~~~~Vq~l 402 (634)
++|.+.|+.|++++.++...... . +.++|| +..++.+. .+++|.+||+.+.. ++.++
T Consensus 59 ~~V~ViD~~t~~v~~~I~vG~~P---~-va~spD--------G~~lyVan~~~~r~~~G~~~~~VsviD~~t~~-v~~~I 125 (386)
T 3sjl_D 59 TQQFVIDGEAGRVIGMIDGGFLP---N-PVVADD--------GSFIAHASTVFSRIARGERTDYVEVFDPVTLL-PTADI 125 (386)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC---E-EEECTT--------SSCEEEEEEEEEETTEEEEEEEEEEECTTTCC-EEEEE
T ss_pred CEEEEEECCCCeEEEEEECCCCC---c-EEECCC--------CCEEEEEcccccccccCCCCCEEEEEECCCCe-EEEEE
Confidence 58999999999999999865542 4 599999 44566554 47899999999864 45554
Q ss_pred ccCCCCccccccccccccCcceEEEEECCCC-eEEEEEC--CCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEE
Q 047036 403 VKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSL--DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWIL 479 (634)
Q Consensus 403 ~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~--DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~Ll 479 (634)
.-.. ++.......-..++++||| +|+++.. +++|.++|..+++ .+.+++--+ . ...+....+.++
T Consensus 126 ~v~~--------g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~-vv~tI~v~g-~--~~~~P~g~~~~~ 193 (386)
T 3sjl_D 126 ELPD--------APRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA-FKRMLDVPD-C--YHIFPTAPDTFF 193 (386)
T ss_dssp EETT--------CCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE-EEEEEECCS-E--EEEEEEETTEEE
T ss_pred ECCC--------ccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc-EEEEEECCC-c--ceeecCCCceeE
Confidence 2000 0000000011246889999 6777764 6899999998864 555554211 1 222333345555
Q ss_pred E-EcCCcEEEEEcc
Q 047036 480 G-TTDTYLILICTL 492 (634)
Q Consensus 480 S-S~D~tIrLWD~~ 492 (634)
+ +.|+.+.++++.
T Consensus 194 ~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 194 MHCRDGSLAKVAFG 207 (386)
T ss_dssp EEETTSCEEEEECC
T ss_pred EECCCCCEEEEECC
Confidence 6 778888777754
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.98 E-value=0.00043 Score=69.30 Aligned_cols=129 Identities=11% Similarity=0.106 Sum_probs=80.2
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC------CeEEEEEcCCCCceEEecccCC
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD------NRLCQWDMRDRSGIVQNMVKGD 406 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D------~tIklWD~R~~~~~Vq~l~gh~ 406 (634)
..|+.+|..+|++.... +. ... .-++|+|| +..|+.+... +.|.+||+...+ +....
T Consensus 169 ~~v~~~d~~~g~~~~~~-~~-~~p--~gl~~spd--------g~~lyv~~~~~~~~~~~~i~~~~~~~~~--l~~~~--- 231 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA-DL-DHP--NGLAFSPD--------EQTLYVSQTPEQGHGSVEITAFAWRDGA--LHDRR--- 231 (305)
T ss_dssp EEEEEECSSSCCCEEEE-EE-SSE--EEEEECTT--------SSEEEEEECCC---CCCEEEEEEEETTE--EEEEE---
T ss_pred CeEEEEcCCCCcEEEEe-cC-CCC--cceEEcCC--------CCEEEEEecCCcCCCCCEEEEEEecCCC--ccCCe---
Confidence 47999999888865543 22 222 34589999 5667666555 799999987542 11100
Q ss_pred CCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEEEcCCcE
Q 047036 407 SPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYL 486 (634)
Q Consensus 407 s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlSS~D~tI 486 (634)
++ ... .......++++++|.|.+++.+| |.+||..+ + ....+..+. .+.+++|+|||+.|..+..+.|
T Consensus 232 --~~--~~~----~~~~pdgi~~d~~G~lwv~~~~g-v~~~~~~g-~-~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 232 --HF--ASV----PDGLPDGFCVDRGGWLWSSSGTG-VCVFDSDG-Q-LLGHIPTPG-TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp --EE--ECC----SSSCCCSEEECTTSCEEECCSSE-EEEECTTS-C-EEEEEECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred --EE--EEC----CCCCCCeEEECCCCCEEEecCCc-EEEECCCC-C-EEEEEECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence 00 000 00012346788999887777665 99999865 2 334444333 5899999999998887544554
Q ss_pred EEEE
Q 047036 487 ILIC 490 (634)
Q Consensus 487 rLWD 490 (634)
..++
T Consensus 300 ~~~~ 303 (305)
T 3dr2_A 300 WMLP 303 (305)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 214
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.96 E-value=1e-06 Score=92.25 Aligned_cols=147 Identities=10% Similarity=0.064 Sum_probs=79.0
Q ss_pred cceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCC
Q 047036 317 TNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRS 396 (634)
Q Consensus 317 ~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~ 396 (634)
..+++.++.| ++|+.||+++|+.+.+|..+.... + ..+|-- . .+..+++|+.|++|+.||+++++
T Consensus 49 g~~~v~~s~d------g~l~a~d~~tG~~~w~~~~~~~~~---~-~~sp~~--~---~~~~v~~g~~dg~v~a~D~~tG~ 113 (369)
T 2hz6_A 49 EPAFLPDPND------GSLYTLGSKNNEGLTKLPFTIPEL---V-QASPCR--S---SDGILYMGKKQDIWYVIDLLTGE 113 (369)
T ss_dssp -CCEEECTTT------CCEEEC-----CCSEECSCCHHHH---H-TTCSCC----------CCCCEEEEEEEEECCC---
T ss_pred CCEEEEeCCC------CEEEEEECCCCceeeeeeccCccc---c-ccCceE--e---cCCEEEEEeCCCEEEEEECCCCc
Confidence 3455555443 689999999999998887664321 0 112210 0 03578899999999999999875
Q ss_pred ceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCC-
Q 047036 397 GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYD- 474 (634)
Q Consensus 397 ~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpD- 474 (634)
. +..+..+. ...++| ++.|++|+.|+.|+.||..+++ .+-.++.+. ..+..++++
T Consensus 114 ~-~w~~~~~~-------------------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~-~~W~~~~~~--~~~~~~~~~~ 170 (369)
T 2hz6_A 114 K-QQTLSSAF-------------------ADSLSPSTSLLYLGRTEYTITMYDTKTRE-LRWNATYFD--YAASLPEDDV 170 (369)
T ss_dssp ---------------------------------------EEEEEEEEEEECCCSSSSS-CCCEEEEEE--ECCBCCCCCT
T ss_pred E-EEEecCCC-------------------cccccccCCEEEEEecCCEEEEEECCCCC-EEEeEeccc--ccCccccCCc
Confidence 3 33332110 011233 4589999999999999998874 443333111 223344444
Q ss_pred ---CCEEEEEcCCcEEEEEcccccCCCCeeeeec
Q 047036 475 ---GKWILGTTDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 475 ---Gk~LlSS~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
+..++++.|+.|+.||.. +|+.+-.+.
T Consensus 171 ~~~~~v~~~~~dg~v~a~d~~----tG~~~W~~~ 200 (369)
T 2hz6_A 171 DYKMSHFVSNGDGLVVTVDSE----SGDVLWIQN 200 (369)
T ss_dssp TCCCCEEEEETSCEEEEECTT----TCCEEEEEE
T ss_pred cccceEEEECCCCEEEEEECC----CCcEEEEec
Confidence 565556899999999975 677665554
No 215
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.91 E-value=0.00025 Score=75.36 Aligned_cols=73 Identities=7% Similarity=0.009 Sum_probs=51.6
Q ss_pred EEECCCC-eEEEEEC---------CCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEE-E-E-cCCcEEEEEccc
Q 047036 427 FASTGDG-SIVVGSL---------DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWIL-G-T-TDTYLILICTLF 493 (634)
Q Consensus 427 va~s~dG-~IASGS~---------DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~Ll-S-S-~D~tIrLWD~~~ 493 (634)
++++++| +|.++.. ++.+.++|..+.+ ....++.. ....+|+|+|||++|+ + . .+++|.+||+.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~-vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~- 345 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ-TSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAA- 345 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC-EEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESS-
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe-EEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECC-
Confidence 6788887 6665432 2345599998864 55666632 3589999999998654 4 4 48999999986
Q ss_pred ccCCCCeeeeec
Q 047036 494 SDKDGKTKTGFS 505 (634)
Q Consensus 494 ~~~~G~~~~gF~ 505 (634)
+++.+..+.
T Consensus 346 ---t~kvv~~I~ 354 (368)
T 1mda_H 346 ---SDQDQSSVE 354 (368)
T ss_dssp ---SCEEEEECC
T ss_pred ---CCcEEEEEE
Confidence 676665554
No 216
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.89 E-value=0.00044 Score=78.62 Aligned_cols=157 Identities=16% Similarity=0.175 Sum_probs=100.3
Q ss_pred cEEEEeCCCCcEEEEEec--cCCC----c-ceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCC
Q 047036 334 GVQQLDIETGKIVTEWKF--EKDG----T-DITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGD 406 (634)
Q Consensus 334 TIrlWDleTGK~V~~lkg--H~~~----V-~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~ 406 (634)
+|+.+|+.||+++-.++. |... + ...+..+..++|. ...++.++.++.|+++|.++++. +..+.-
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~-----~~~l~~~~~~G~l~~lD~~tG~~-l~~~~~-- 355 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKP-----RKVILHAPKNGFFFVLDRTNGKF-ISAKNF-- 355 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEE-----EEEEEECCTTSEEEEEETTTCCE-EEEEES--
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcE-----eeEEEEECCCCEEEEEECCCCCE-eccccc--
Confidence 699999999999988875 3210 0 0123344445221 15799999999999999998753 333210
Q ss_pred CCccccccc-----c-------cc-----------ccCcceEEEEECCCC-eEEEEEC----------------------
Q 047036 407 SPVLHWTQG-----H-------QF-----------SRGTNFQCFASTGDG-SIVVGSL---------------------- 440 (634)
Q Consensus 407 s~V~~~~~g-----~-------~y-----------~~~~~fssva~s~dG-~IASGS~---------------------- 440 (634)
.++ .|..+ . .| .-..++..++++|++ .|++++.
T Consensus 356 ~~~-~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~ 434 (677)
T 1kb0_A 356 VPV-NWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKP 434 (677)
T ss_dssp SCC-SSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTST
T ss_pred ccc-CcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccc
Confidence 000 01000 0 00 001123356788765 6666543
Q ss_pred ---------------------CCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCC
Q 047036 441 ---------------------DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDG 498 (634)
Q Consensus 441 ---------------------DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G 498 (634)
.|.|+.||+.+++ .+-.++ ++.++.+..++.+|..|+. +.|++|++||+. +|
T Consensus 435 ~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~-~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~----tG 508 (677)
T 1kb0_A 435 QSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK-AAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA----TG 508 (677)
T ss_dssp TGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE-EEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETT----TC
T ss_pred ccccccccccccccccCCCCCccEEEEEeCCCCc-EEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECC----CC
Confidence 2789999998874 555554 4556777778888888887 889999999986 78
Q ss_pred Ceeeeec
Q 047036 499 KTKTGFS 505 (634)
Q Consensus 499 ~~~~gF~ 505 (634)
+.+-.|.
T Consensus 509 ~~lw~~~ 515 (677)
T 1kb0_A 509 EKLWEAP 515 (677)
T ss_dssp CEEEEEE
T ss_pred ceeeeee
Confidence 8877775
No 217
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.82 E-value=0.00018 Score=80.63 Aligned_cols=106 Identities=12% Similarity=0.082 Sum_probs=78.7
Q ss_pred CEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecc--cc
Q 047036 376 ESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKT--SM 452 (634)
Q Consensus 376 ~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~--t~ 452 (634)
..+++...+++|.+||+.+++ ++..+. ......+++++||| +|++++.|+.|.+||+. ++
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~-v~~~i~----------------~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~ 230 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYE-IKTVLD----------------TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP 230 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCC-EEEEEE----------------CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC
T ss_pred eEEEEeCCCCeEEEEECCCCe-EEEEEe----------------CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC
Confidence 467778889999999998864 455553 11223578899999 78999999999999985 54
Q ss_pred ccccccccCCCCCeEEEEEC----CCCCEEEE--EcCCcEEEEEcccccCCCCeeeee
Q 047036 453 RQAKTAFPGLGSPITHVDVT----YDGKWILG--TTDTYLILICTLFSDKDGKTKTGF 504 (634)
Q Consensus 453 r~akt~L~GH~d~ItsVdfS----pDGk~LlS--S~D~tIrLWD~~~~~~~G~~~~gF 504 (634)
+ ....++. +....+|+|| |||+||+. -.+++|.++|+. +++.+..+
T Consensus 231 ~-~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~----t~~~~~~i 282 (567)
T 1qks_A 231 T-TVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE----TLEPKKIQ 282 (567)
T ss_dssp C-EEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT----TCCEEEEE
T ss_pred c-EeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECC----CCcEEEEE
Confidence 3 4455654 3346899999 79999987 457999999974 56655543
No 218
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.82 E-value=0.00034 Score=79.72 Aligned_cols=159 Identities=13% Similarity=0.185 Sum_probs=96.3
Q ss_pred cEEEEeCCCCcEEEEEec--cCCC----c-ceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCC
Q 047036 334 GVQQLDIETGKIVTEWKF--EKDG----T-DITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGD 406 (634)
Q Consensus 334 TIrlWDleTGK~V~~lkg--H~~~----V-~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~ 406 (634)
+|+.||+.||+++-.++. |... . .+.+..+..+++. ...++.++.++.|+++|.++++. +....-
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~-----~~~v~~~~~~G~l~~lD~~tG~~-l~~~~~-- 347 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP-----RKVLMQAPKNGFFYVIDRATGEL-LSAKGI-- 347 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE-----EEEEEECCTTSEEEEEETTTCCE-EEEEES--
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE-----EEEEEEECCCCeEEEEECCCCCE-eccccc--
Confidence 599999999999988875 3210 0 0112233333210 13788999999999999998754 321110
Q ss_pred CCcccccccc-------------c--c------------ccCcceEEEEECCCC-eEEEEEC------------------
Q 047036 407 SPVLHWTQGH-------------Q--F------------SRGTNFQCFASTGDG-SIVVGSL------------------ 440 (634)
Q Consensus 407 s~V~~~~~g~-------------~--y------------~~~~~fssva~s~dG-~IASGS~------------------ 440 (634)
.++ .|..+- . | .-..++..++++|+. .|++++.
T Consensus 348 ~~~-~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~ 426 (689)
T 1yiq_A 348 VPQ-SWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPF 426 (689)
T ss_dssp SCC-SSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSC
T ss_pred ccc-ccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccccccccc
Confidence 000 011100 0 0 011123346777764 5665532
Q ss_pred ---------------------------CCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcc
Q 047036 441 ---------------------------DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTL 492 (634)
Q Consensus 441 ---------------------------DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~ 492 (634)
+|.|+.||+.+++ .+-.++.+ .++.+-.++..|..|.. +.|++|+.||+.
T Consensus 427 ~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~-~~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 427 KSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ-AAWEVPYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp TTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTE-EEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred ccccccCccccccCcccccCCCCCCCcceeEEEEECCCCC-eEeEccCC-CCccCccceECCCEEEEECCCCcEEEEECC
Confidence 4889999999875 55556543 44555566767777777 889999999986
Q ss_pred cccCCCCeeeeecCC
Q 047036 493 FSDKDGKTKTGFSGR 507 (634)
Q Consensus 493 ~~~~~G~~~~gF~gh 507 (634)
+|+.+-.|.-.
T Consensus 505 ----tG~~lw~~~~~ 515 (689)
T 1yiq_A 505 ----TGEKLWEQPAA 515 (689)
T ss_dssp ----TCCEEEEEECS
T ss_pred ----CCccceeeeCC
Confidence 78887666533
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.80 E-value=0.0011 Score=69.87 Aligned_cols=165 Identities=13% Similarity=0.146 Sum_probs=96.5
Q ss_pred EeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEE-EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEE
Q 047036 313 MRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTE-WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWD 391 (634)
Q Consensus 313 ~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~-lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD 391 (634)
.++|++.|+.+.... +++|.++| ++|+++.+ +.... + +.+.|++ ...+++.+.|+++.+||
T Consensus 132 ~spDG~~l~v~n~~~----~~~v~viD-~t~~~~~~~i~~~~-----~-~~~~~~~-------~~~~~~~~~dg~~~~vd 193 (373)
T 2mad_H 132 NTPNNADLLFFQFAA----GPAVGLVV-QGGSSDDQLLSSPT-----C-YHIHPGA-------PSTFYLLCAQGGLAKTD 193 (373)
T ss_pred ECCCCCEEEEEecCC----CCeEEEEE-CCCCEEeEEcCCCc-----e-EEEEeCC-------CceEEEEcCCCCEEEEE
Confidence 345555555443210 25799999 99999988 75432 2 2556663 24566777889999998
Q ss_pred cCCCCceEEecc-----cCCCCccc------------c--ccccccc-----------c---------------CcceEE
Q 047036 392 MRDRSGIVQNMV-----KGDSPVLH------------W--TQGHQFS-----------R---------------GTNFQC 426 (634)
Q Consensus 392 ~R~~~~~Vq~l~-----gh~s~V~~------------~--~~g~~y~-----------~---------------~~~fss 426 (634)
. +++. +.... -...++.. + ..++-++ . ......
T Consensus 194 ~-~g~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~ 271 (373)
T 2mad_H 194 H-AGGA-AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQ 271 (373)
T ss_pred C-CCcE-EEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEe
Confidence 8 5432 21110 00000000 0 0000000 0 001223
Q ss_pred EEECCCC-eEEEEEC----------CCcEEEEeccccccccccccCCCCCeEEEEECCCCC-EEEE-E-cCCcEEEEEcc
Q 047036 427 FASTGDG-SIVVGSL----------DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGK-WILG-T-TDTYLILICTL 492 (634)
Q Consensus 427 va~s~dG-~IASGS~----------DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk-~LlS-S-~D~tIrLWD~~ 492 (634)
++++++| +|.++.. .++|-++|..+++ ...+++ .+....+|.|||||+ .|++ . .+++|.+||+.
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~-vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ-TSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred EEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE-EEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 6778887 6666543 4689999998864 556665 344679999999999 5666 3 48999999986
Q ss_pred cccCCCCeeee
Q 047036 493 FSDKDGKTKTG 503 (634)
Q Consensus 493 ~~~~~G~~~~g 503 (634)
+++.+..
T Consensus 350 ----t~~vv~~ 356 (373)
T 2mad_H 350 ----AGDQDQS 356 (373)
T ss_pred ----CCCEEee
Confidence 5665543
No 220
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.79 E-value=0.0022 Score=63.98 Aligned_cols=157 Identities=8% Similarity=-0.001 Sum_probs=92.3
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccC--CCcceeEEEEecCCCCCCCCCCCEEEEEeC-----
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEK--DGTDITMRDITNDTKSSQLDPSESTFLGLD----- 383 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~--~~V~I~vvsfsPd~K~~q~~~g~~laSGS~----- 383 (634)
+..+.+++++++. . ..|++||+++|++..-..... ....+.-++++|+ |++.++...
T Consensus 59 i~~~~dG~l~v~~-~-------~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d--------G~l~~~~~~~~~~~ 122 (297)
T 3g4e_A 59 VALRQSGGYVATI-G-------TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPA--------GRYFAGTMAEETAP 122 (297)
T ss_dssp EEEBTTSSEEEEE-T-------TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTT--------SCEEEEEEECCSBT
T ss_pred EEECCCCCEEEEE-C-------CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCC--------CCEEEecCCccccc
Confidence 3445555655554 2 479999999987643332211 1111233477887 565554432
Q ss_pred ------CCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eE-EEEECCCcEEEEec--cccc
Q 047036 384 ------DNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SI-VVGSLDGKIRLYSK--TSMR 453 (634)
Q Consensus 384 ------D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~I-ASGS~DGtIRLWD~--~t~r 453 (634)
.+.|.++|+. +.. ..+..+ -..-..++++++| .| ++.+.++.|.+||. .++.
T Consensus 123 ~~~~~~~~~l~~~d~~--g~~-~~~~~~---------------~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~ 184 (297)
T 3g4e_A 123 AVLERHQGALYSLFPD--HHV-KKYFDQ---------------VDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQ 184 (297)
T ss_dssp TBCCTTCEEEEEECTT--SCE-EEEEEE---------------ESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCC
T ss_pred ccccCCCcEEEEEECC--CCE-EEEeec---------------cccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCc
Confidence 2356666654 222 222100 0112568899998 45 56677899999986 2321
Q ss_pred ----cccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeec
Q 047036 454 ----QAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 454 ----~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
+....++.+...+.+|++.++|+..++ ...+.|..||.. +|+.+..+.
T Consensus 185 ~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~----tG~~~~~i~ 237 (297)
T 3g4e_A 185 ISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV----TGKRLQTVK 237 (297)
T ss_dssp EEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT----TCCEEEEEE
T ss_pred ccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC----CceEEEEEE
Confidence 112234444456789999999998887 567889999963 476655443
No 221
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.78 E-value=0.00065 Score=76.81 Aligned_cols=132 Identities=13% Similarity=0.028 Sum_probs=87.4
Q ss_pred CCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCC--------------------------
Q 047036 332 APGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDN-------------------------- 385 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~-------------------------- 385 (634)
+++|-+.|.+|.+++.+...-.+. .-++++|+ |..+++.+.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg~p---d~~~~spd--------Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~ 242 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSGNL---DNCDADYE--------GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE 242 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESSCC---CCEEECSS--------SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH
T ss_pred CceEEEEECCCCeEEEEEEeCCCc---cceEECCC--------CCEEEEEecCcccCcchhhccccccceEEEeecccee
Confidence 368999999999999998753332 23589998 45677776542
Q ss_pred ------------eEEEEEcCC--CCceEEecccCCCCccccccccccccCcceEEEEECCCC-e-EEEEECCCcEEEEec
Q 047036 386 ------------RLCQWDMRD--RSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-S-IVVGSLDGKIRLYSK 449 (634)
Q Consensus 386 ------------tIklWD~R~--~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~-IASGS~DGtIRLWD~ 449 (634)
.|.+.|+++ +...+..+. ....-.++.++||| + ++++-.+++|.++|.
T Consensus 243 ~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip----------------vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~ 306 (595)
T 1fwx_A 243 KAIAAGDYQELNGVKVVDGRKEASSLFTRYIP----------------IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDV 306 (595)
T ss_dssp HHHHHTCSEEETTEEEEECSGGGCCSSEEEEE----------------EESSCCCEEECTTSSEEEEECTTSSBEEEEEG
T ss_pred EeccCCCeeEECcEEEEeCcccCCceeEEEEe----------------cCCCceEEEEcCCCCEEEEeCCCCCeEEEEEC
Confidence 356666654 211122221 11123467899999 4 556678999999998
Q ss_pred ccccc-----------ccccccCCCCCeEEEEECCCCCEEEE--EcCCcEEEEEcc
Q 047036 450 TSMRQ-----------AKTAFPGLGSPITHVDVTYDGKWILG--TTDTYLILICTL 492 (634)
Q Consensus 450 ~t~r~-----------akt~L~GH~d~ItsVdfSpDGk~LlS--S~D~tIrLWD~~ 492 (634)
.+.+. ....+ ..+..-.+++|+||| ++.+ -.|+.|..||+.
T Consensus 307 ~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 307 TRFDAVFYENADPRSAVVAEP-ELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp GGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHH
T ss_pred cccccccccccCcccceEEEc-CCCCCcceEEECCCC-eEEEEEecCCcEEEEEhh
Confidence 76420 11222 244567999999999 6655 459999999975
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.78 E-value=0.00011 Score=83.08 Aligned_cols=108 Identities=11% Similarity=0.063 Sum_probs=72.5
Q ss_pred eEEEEecCCCCCCCCCCCEEE-----EEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC
Q 047036 359 TMRDITNDTKSSQLDPSESTF-----LGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG 433 (634)
Q Consensus 359 ~vvsfsPd~K~~q~~~g~~la-----SGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG 433 (634)
...+|||| |+.|| .|+...+|++||+.++..+...+. ...+.+++++ ||
T Consensus 132 ~~~~~SpD--------g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~-----------------~~k~~~~~Ws-Dg 185 (693)
T 3iuj_A 132 DQLSFSRD--------GRILAYSLSLAGSDWREIHLMDVESKQPLETPLK-----------------DVKFSGISWL-GN 185 (693)
T ss_dssp EEEEECTT--------SSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE-----------------EEESCCCEEE-TT
T ss_pred EEEEECCC--------CCEEEEEEecCCCceEEEEEEECCCCCCCccccC-----------------CceeccEEEe-CC
Confidence 44589999 56666 344457899999998753211121 1123456778 88
Q ss_pred -eEEEEECCCc-------------EEEEecccccc---ccccccC-CCCCeEEEEECCCCCEEEE-Ec----CCcEEEEE
Q 047036 434 -SIVVGSLDGK-------------IRLYSKTSMRQ---AKTAFPG-LGSPITHVDVTYDGKWILG-TT----DTYLILIC 490 (634)
Q Consensus 434 -~IASGS~DGt-------------IRLWD~~t~r~---akt~L~G-H~d~ItsVdfSpDGk~LlS-S~----D~tIrLWD 490 (634)
.|+.++.+.. |++|++.+... .....++ |...+.++.+||||++|+. +. .+.|.+||
T Consensus 186 ~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 265 (693)
T 3iuj_A 186 EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKD 265 (693)
T ss_dssp TEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEE
T ss_pred CEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEE
Confidence 7999988854 99999876421 1223344 5566899999999999975 32 25899999
Q ss_pred cc
Q 047036 491 TL 492 (634)
Q Consensus 491 ~~ 492 (634)
+.
T Consensus 266 ~~ 267 (693)
T 3iuj_A 266 LS 267 (693)
T ss_dssp TT
T ss_pred CC
Confidence 74
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.74 E-value=0.0012 Score=72.59 Aligned_cols=138 Identities=14% Similarity=0.166 Sum_probs=86.2
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCccee-EEEEecCCCCCCCCCCCEEEEEe-------------------CCCeEEEEEc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDIT-MRDITNDTKSSQLDPSESTFLGL-------------------DDNRLCQWDM 392 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~-vvsfsPd~K~~q~~~g~~laSGS-------------------~D~tIklWD~ 392 (634)
+.|.+.|.+|++++.+|........+. -..|+|+ ++.+++.. ..++|.+||+
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~--------~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~ 235 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLP--------NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL 235 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETT--------TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET
T ss_pred CeEEEEECCCCeEEEEEccCCCCccccceEEECCC--------CCEEEEccCcCccccccccchhhhhhccCCEEEEEEC
Confidence 689999999999999997332211111 1256898 56666663 4899999999
Q ss_pred CCCCceEEecccCCCCccccccccccccCcceEE--EEECCCC-eEEEEE------CCCcEEEEeccccc----c-----
Q 047036 393 RDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQC--FASTGDG-SIVVGS------LDGKIRLYSKTSMR----Q----- 454 (634)
Q Consensus 393 R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fss--va~s~dG-~IASGS------~DGtIRLWD~~t~r----~----- 454 (634)
.++ ++++++.- +.. ...-.. ++++|+| ++.+++ .+++|-+|....++ +
T Consensus 236 ~~~-k~~~tI~v----------g~~---g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~ 301 (462)
T 2ece_A 236 RKR-KRIHSLTL----------GEE---NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIP 301 (462)
T ss_dssp TTT-EEEEEEES----------CTT---EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCC-cEeeEEec----------CCC---CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCC
Confidence 875 55666531 000 000112 3459998 555555 67788765532210 0
Q ss_pred ---cccccc-------CCCCCeEEEEECCCCCEEEEEc--CCcEEEEEcc
Q 047036 455 ---AKTAFP-------GLGSPITHVDVTYDGKWILGTT--DTYLILICTL 492 (634)
Q Consensus 455 ---akt~L~-------GH~d~ItsVdfSpDGk~LlSS~--D~tIrLWD~~ 492 (634)
...+++ +.+..+..|.+||||++|..|+ .+.|.++|+.
T Consensus 302 ~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 302 AEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred CccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 111121 1134578999999999998744 6899999975
No 224
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.71 E-value=0.0032 Score=62.09 Aligned_cols=125 Identities=18% Similarity=0.153 Sum_probs=87.1
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
+.|+.+|.. |+.+..+..+...+ ....+.++ ..++.|+.++.|.++|+. +. .+..+...
T Consensus 117 ~~l~~~d~~-g~~~~~~~~~~~~~--~~~~~~~~---------g~l~vgt~~~~l~~~d~~-g~-~~~~~~~~------- 175 (330)
T 3hxj_A 117 GHLYAINTD-GTEKWRFKTKKAIY--ATPIVSED---------GTIYVGSNDNYLYAINPD-GT-EKWRFKTN------- 175 (330)
T ss_dssp SEEEEECTT-SCEEEEEECSSCCC--SCCEECTT---------SCEEEECTTSEEEEECTT-SC-EEEEEECS-------
T ss_pred CEEEEEcCC-CCEEEEEcCCCcee--eeeEEcCC---------CEEEEEcCCCEEEEECCC-CC-EeEEEecC-------
Confidence 579999999 99888777665433 22244443 358889999999999998 43 33333211
Q ss_pred ccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEEEcCCcEEEEE
Q 047036 413 TQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILIC 490 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlSS~D~tIrLWD 490 (634)
...+.+++..++|.|.+|+ +.|..|| .+++ ....+......|.++.+.++|+..+++.++.|..+|
T Consensus 176 --------~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~-~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 176 --------DAITSAASIGKDGTIYFGS--DKVYAIN-PDGT-EKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAIN 241 (330)
T ss_dssp --------SCCCSCCEECTTCCEEEES--SSEEEEC-TTSC-EEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEEC
T ss_pred --------CCceeeeEEcCCCEEEEEe--CEEEEEC-CCCc-EEEEEccCCcceeceEECCCCeEEEEcCCCeEEEEC
Confidence 1123445667788888888 8899999 4443 333444445678999999999988888888888887
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.66 E-value=0.0038 Score=63.76 Aligned_cols=132 Identities=11% Similarity=0.032 Sum_probs=74.8
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCc---------------------------ceeEEEEecCCCCCCCCCCCEEEEEeCCC
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGT---------------------------DITMRDITNDTKSSQLDPSESTFLGLDDN 385 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V---------------------------~I~vvsfsPd~K~~q~~~g~~laSGS~D~ 385 (634)
+.|++||+.+|+..+.+.+|.... .+.-++|+|+ ++.|+.+...+
T Consensus 145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d--------g~~ly~~~~~~ 216 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE--------NEWLYLSPMHS 216 (343)
T ss_dssp CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT--------SCEEEEEESSC
T ss_pred CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccC--------CCEEEEEeCCC
Confidence 689999999999988876642110 0122477887 55666665554
Q ss_pred -eEEEEEcCCC--CceE-EecccCCCCccccccccccccCcceEEEEECCCCe-EEEEECCCcEEEEecccccccccccc
Q 047036 386 -RLCQWDMRDR--SGIV-QNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGS-IVVGSLDGKIRLYSKTSMRQAKTAFP 460 (634)
Q Consensus 386 -tIklWD~R~~--~~~V-q~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~-IASGS~DGtIRLWD~~t~r~akt~L~ 460 (634)
.|..+|.... ..+- ..+. ..+.. .++ ...-..++++++|. +++...++.|++||..+++ ..+...
T Consensus 217 ~~l~~~~~~~~~~~~~~~~~~~---~~~~~--~g~----~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~-~~~~~~ 286 (343)
T 2qe8_A 217 TSMYRIKSADLSNLQLTDAELG---SKIER--YSE----KPICDGISIDKDHNIYVGDLAHSAIGVITSADRA-YKLLVT 286 (343)
T ss_dssp SEEEEEEHHHHTCTTCCHHHHH---TTCEE--EEE----CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE-EEEEEE
T ss_pred CeEEEEEHHHhcCCCCChhhhh---cceEe--ccc----CCCCceEEECCCCCEEEEccCCCeEEEEECCCCC-EEEEEE
Confidence 6666664310 0000 0000 00000 000 00123468888995 5666778999999983333 322222
Q ss_pred -CCCCCeEEEEECCCCCEEEEEc
Q 047036 461 -GLGSPITHVDVTYDGKWILGTT 482 (634)
Q Consensus 461 -GH~d~ItsVdfSpDGk~LlSS~ 482 (634)
.+...+++|+|++||+.++++.
T Consensus 287 ~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 287 DEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp CGGGSCEEEEEECTTSCEEEEEC
T ss_pred CCceecCCeeEECCCCcEEEEeC
Confidence 1345689999999998777743
No 226
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.65 E-value=0.0069 Score=59.70 Aligned_cols=140 Identities=17% Similarity=0.150 Sum_probs=91.6
Q ss_pred EEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEE
Q 047036 312 LMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWD 391 (634)
Q Consensus 312 L~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD 391 (634)
+.+.++++++.+.. +.|+.+|.. |+.+..+..+...+ ....+.++ ..++.|+ +.|.++|
T Consensus 143 ~~~~~g~l~vgt~~-------~~l~~~d~~-g~~~~~~~~~~~~~--~~~~~d~~---------g~l~v~t--~~l~~~d 201 (330)
T 3hxj_A 143 IVSEDGTIYVGSND-------NYLYAINPD-GTEKWRFKTNDAIT--SAASIGKD---------GTIYFGS--DKVYAIN 201 (330)
T ss_dssp EECTTSCEEEECTT-------SEEEEECTT-SCEEEEEECSSCCC--SCCEECTT---------CCEEEES--SSEEEEC
T ss_pred EEcCCCEEEEEcCC-------CEEEEECCC-CCEeEEEecCCCce--eeeEEcCC---------CEEEEEe--CEEEEEC
Confidence 34556665555432 579999999 99988887665443 22244443 3466666 8999999
Q ss_pred cCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCCCCCeEEEEE
Q 047036 392 MRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDV 471 (634)
Q Consensus 392 ~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdf 471 (634)
+.+.. +..+.. ....+.+++..++|.|.+|+.++.|..+|..+ + ....++.....+.++.+
T Consensus 202 -~~g~~-~~~~~~---------------~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g-~-~~~~~~~~~~~~~~~~~ 262 (330)
T 3hxj_A 202 -PDGTE-KWNFYA---------------GYWTVTRPAISEDGTIYVTSLDGHLYAINPDG-T-EKWRFKTGKRIESSPVI 262 (330)
T ss_dssp -TTSCE-EEEECC---------------SSCCCSCCEECTTSCEEEEETTTEEEEECTTS-C-EEEEEECSSCCCSCCEE
T ss_pred -CCCcE-EEEEcc---------------CCcceeceEECCCCeEEEEcCCCeEEEECCCC-C-EeEEeeCCCCccccceE
Confidence 54432 222210 11224566778889999999999999998644 2 33344434444566778
Q ss_pred CCCCCEEEEEcCCcEEEEEc
Q 047036 472 TYDGKWILGTTDTYLILICT 491 (634)
Q Consensus 472 SpDGk~LlSS~D~tIrLWD~ 491 (634)
.++|+..+++.++.|..+|.
T Consensus 263 ~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 263 GNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp CTTSCEEEECTTCEEEEECT
T ss_pred cCCCeEEEecCCCCEEEECC
Confidence 88998877788888998883
No 227
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.63 E-value=0.017 Score=58.65 Aligned_cols=140 Identities=12% Similarity=0.106 Sum_probs=81.3
Q ss_pred eEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEE-EEEeCCCeEEE
Q 047036 311 LLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSEST-FLGLDDNRLCQ 389 (634)
Q Consensus 311 mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~l-aSGS~D~tIkl 389 (634)
+..+.++++++++..+......+.|+.+| +|++.. +..+.... ..++|+|+ ++.+ ++.+.++.|.+
T Consensus 139 i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~--~~i~~s~d--------g~~lyv~~~~~~~I~~ 205 (326)
T 2ghs_A 139 GRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIP--NSICFSPD--------GTTGYFVDTKVNRLMR 205 (326)
T ss_dssp EEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSE--EEEEECTT--------SCEEEEEETTTCEEEE
T ss_pred EEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCccc--CCeEEcCC--------CCEEEEEECCCCEEEE
Confidence 33455555555443211001124677777 576544 33332222 34589998 4544 55566899999
Q ss_pred EEcC--CC-C----ceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEE-CCCcEEEEeccccccccccccC
Q 047036 390 WDMR--DR-S----GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGS-LDGKIRLYSKTSMRQAKTAFPG 461 (634)
Q Consensus 390 WD~R--~~-~----~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS-~DGtIRLWD~~t~r~akt~L~G 461 (634)
||+. ++ . ..+..+.. .......++++++|.|.++. ..+.|.+||..+ + ....+..
T Consensus 206 ~d~~~~~Gl~~~~~~~~~~~~~---------------~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g-~-~~~~i~~ 268 (326)
T 2ghs_A 206 VPLDARTGLPTGKAEVFIDSTG---------------IKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDG-N-HIARYEV 268 (326)
T ss_dssp EEBCTTTCCBSSCCEEEEECTT---------------SSSEEEEEEECTTSCEEEEEETTTEEEEECTTC-C-EEEEEEC
T ss_pred EEcccccCCcccCceEEEECCC---------------CCCCCCeeEECCCCCEEEEEeCCCEEEEECCCC-C-EEEEEEC
Confidence 9986 33 1 11111110 01123567889999665554 568999999843 3 4455555
Q ss_pred CCCCeEEEEEC-CCCCEEEE
Q 047036 462 LGSPITHVDVT-YDGKWILG 480 (634)
Q Consensus 462 H~d~ItsVdfS-pDGk~LlS 480 (634)
+...|++++|+ |||+.|..
T Consensus 269 ~~~~~~~~af~g~d~~~L~v 288 (326)
T 2ghs_A 269 PGKQTTCPAFIGPDASRLLV 288 (326)
T ss_dssp SCSBEEEEEEESTTSCEEEE
T ss_pred CCCCcEEEEEecCCCCEEEE
Confidence 56679999999 99988755
No 228
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.61 E-value=0.0019 Score=68.01 Aligned_cols=131 Identities=10% Similarity=-0.027 Sum_probs=84.6
Q ss_pred cEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe----------CCCeEEEEEcCCCCceEEecc
Q 047036 334 GVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL----------DDNRLCQWDMRDRSGIVQNMV 403 (634)
Q Consensus 334 TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS----------~D~tIklWD~R~~~~~Vq~l~ 403 (634)
+|.++|+.+|+++.++...... . +.|+|| +..++.+. .+++|.+||+.+.. ++..+.
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p---~-i~~spD--------g~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~-~~~~i~ 114 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP---N-PVAAHS--------GSEFALASTSFSRIAKGKRTDYVEVFDPVTFL-PIADIE 114 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC---C-eEECCC--------CCEEEEEeccccccccCCCCCeEEEEECCCCc-EEEEEE
Confidence 8999999999999998764432 2 489999 56677765 47899999998653 344432
Q ss_pred cCCCCccccccccccccCcceEEEEECCCC-eEEEEEC--CCcEEEEecccccccccc-ccCCCCCeEEEEECCCCCEE-
Q 047036 404 KGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSL--DGKIRLYSKTSMRQAKTA-FPGLGSPITHVDVTYDGKWI- 478 (634)
Q Consensus 404 gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~--DGtIRLWD~~t~r~akt~-L~GH~d~ItsVdfSpDGk~L- 478 (634)
--.. ........-..++++||| +|++++. ++.|.++| .+++ .... ++ ... ++.+.|+|+.+
T Consensus 115 ~~~~--------~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~-~~~~~i~-~~~---~~~~~~~~~~~~ 180 (373)
T 2mad_H 115 LPDA--------PRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGS-SDDQLLS-SPT---CYHIHPGAPSTF 180 (373)
T ss_pred CCCc--------cccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCC-EEeEEcC-CCc---eEEEEeCCCceE
Confidence 0000 000000111356889999 7888774 58899999 8864 5555 54 222 24566776433
Q ss_pred EE-EcCCcEEEEEc
Q 047036 479 LG-TTDTYLILICT 491 (634)
Q Consensus 479 lS-S~D~tIrLWD~ 491 (634)
++ +.|+.+.+||.
T Consensus 181 ~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 181 YLLCAQGGLAKTDH 194 (373)
T ss_pred EEEcCCCCEEEEEC
Confidence 33 66788888875
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.38 E-value=0.0093 Score=60.86 Aligned_cols=140 Identities=15% Similarity=0.160 Sum_probs=83.1
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcc--e-eE--EEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCC
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTD--I-TM--RDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDS 407 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~--I-~v--vsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s 407 (634)
+.|+.+|+.+|+++.++......-. + .+ +..+|- + .+..++.++.++.|..+|+++++. +....
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~-----~-~~~~v~~~~~~g~l~~~d~~tG~~-~w~~~---- 266 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPV-----V-VNGVVFALAYNGNLTALDLRSGQI-MWKRE---- 266 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-----------CCCCCCE-----E-ETTEEEEECTTSCEEEEETTTCCE-EEEEC----
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcE-----E-ECCEEEEEecCcEEEEEECCCCcE-Eeecc----
Confidence 6899999999999887764321000 0 00 001111 0 035889999999999999998653 22221
Q ss_pred CccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCC-CCCeEEEEECCCCCEEEEEcCCcE
Q 047036 408 PVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGL-GSPITHVDVTYDGKWILGTTDTYL 486 (634)
Q Consensus 408 ~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH-~d~ItsVdfSpDGk~LlSS~D~tI 486 (634)
. ....+++. .++.|.+++.+|.|..+|..+++ .+-..+.. ...+.+..+. +|+.++.+.++.|
T Consensus 267 ------------~-~~~~~~~~-~~~~l~~~~~~g~l~~~d~~tG~-~~w~~~~~~~~~~~~~~~~-~~~l~v~~~~g~l 330 (376)
T 3q7m_A 267 ------------L-GSVNDFIV-DGNRIYLVDQNDRVMALTIDGGV-TLWTQSDLLHRLLTSPVLY-NGNLVVGDSEGYL 330 (376)
T ss_dssp ------------C-CCEEEEEE-ETTEEEEEETTCCEEEEETTTCC-EEEEECTTTTSCCCCCEEE-TTEEEEECTTSEE
T ss_pred ------------C-CCCCCceE-ECCEEEEEcCCCeEEEEECCCCc-EEEeecccCCCcccCCEEE-CCEEEEEeCCCeE
Confidence 0 01223333 36689999999999999998874 33333311 1222233332 4444444889999
Q ss_pred EEEEcccccCCCCeeee
Q 047036 487 ILICTLFSDKDGKTKTG 503 (634)
Q Consensus 487 rLWD~~~~~~~G~~~~g 503 (634)
..+|.. +|+.+..
T Consensus 331 ~~~d~~----tG~~~~~ 343 (376)
T 3q7m_A 331 HWINVE----DGRFVAQ 343 (376)
T ss_dssp EEEETT----TCCEEEE
T ss_pred EEEECC----CCcEEEE
Confidence 999975 5665443
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.38 E-value=0.0061 Score=62.22 Aligned_cols=153 Identities=13% Similarity=0.098 Sum_probs=93.6
Q ss_pred CCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCC
Q 047036 315 GETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRD 394 (634)
Q Consensus 315 ~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~ 394 (634)
+++.++++++... +++|+..|++||++++++.-..... ...+++++ +.+.++.-.+++|.++|+.+
T Consensus 30 ~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~~~f---geGi~~~g-------~~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 30 ENDTLFESTGLYG----RSSVRQVALQTGKVENIHKMDDSYF---GEGLTLLN-------EKLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp STTEEEEEECSTT----TCEEEEEETTTCCEEEEEECCTTCC---EEEEEEET-------TEEEEEETTCSEEEEEETTT
T ss_pred CCCeEEEECCCCC----CCEEEEEECCCCCEEEEEecCCCcc---eEEEEEeC-------CEEEEEEecCCEEEEEECCC
Confidence 3344455554321 2689999999999999976433211 12344441 23444555689999999987
Q ss_pred CCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccccccccc-C-CCC---CeEE
Q 047036 395 RSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFP-G-LGS---PITH 468 (634)
Q Consensus 395 ~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~-G-H~d---~Its 468 (634)
.+ ++.++.-- .+ .. ...++|| +|+++..+++|.++|..+.+ ....++ + ++. .++.
T Consensus 96 ~~-v~~~i~~g-~~-------------~g---~glt~Dg~~l~vs~gs~~l~viD~~t~~-v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 96 LS-NIKNFTHQ-MK-------------DG---WGLATDGKILYGSDGTSILYEIDPHTFK-LIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp TE-EEEEEECC-SS-------------SC---CEEEECSSSEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEE
T ss_pred Cc-EEEEEECC-CC-------------Ce---EEEEECCCEEEEECCCCeEEEEECCCCc-EEEEEEECCCCccccccee
Confidence 54 45555310 00 00 1233455 67777788999999998864 444443 2 222 3678
Q ss_pred EEECCCCCEEEEE-cCCcEEEEEcccccCCCCeeeeec
Q 047036 469 VDVTYDGKWILGT-TDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 469 VdfSpDGk~LlSS-~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
+.|. ||+..++. .+++|.++|+. +|+.+..+.
T Consensus 157 le~~-dg~lyvn~~~~~~V~vID~~----tg~V~~~I~ 189 (266)
T 2iwa_A 157 LEYI-NGEVWANIWQTDCIARISAK----DGTLLGWIL 189 (266)
T ss_dssp EEEE-TTEEEEEETTSSEEEEEETT----TCCEEEEEE
T ss_pred EEEE-CCEEEEecCCCCeEEEEECC----CCcEEEEEE
Confidence 8888 88544454 57899999985 676655443
No 231
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.34 E-value=0.029 Score=57.18 Aligned_cols=188 Identities=13% Similarity=0.052 Sum_probs=111.6
Q ss_pred EEEeeeCC-CeEEEec----CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCC
Q 047036 258 SLTLGALD-NSFLVSD----LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQA 332 (634)
Q Consensus 258 ~LavG~~D-~sfvv~G----~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~ 332 (634)
-|++. +| +-|+..| ++|.++....+.+.. .+.+.. ...+.+..+. + ..+.+++-. +
T Consensus 25 Gl~~~-~dg~Lyvstg~~~~s~v~~iD~~tg~v~~---~i~l~~-------~~fgeGi~~~-g-~~lyv~t~~-~----- 85 (266)
T 2iwa_A 25 GLVYA-ENDTLFESTGLYGRSSVRQVALQTGKVEN---IHKMDD-------SYFGEGLTLL-N-EKLYQVVWL-K----- 85 (266)
T ss_dssp EEEEC-STTEEEEEECSTTTCEEEEEETTTCCEEE---EEECCT-------TCCEEEEEEE-T-TEEEEEETT-C-----
T ss_pred cEEEe-CCCeEEEECCCCCCCEEEEEECCCCCEEE---EEecCC-------CcceEEEEEe-C-CEEEEEEec-C-----
Confidence 45443 43 4455554 689888876654221 111211 1122333332 2 234444433 2
Q ss_pred CcEEEEeCCCCcEEEEEecc-CCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecc-cC-CCCc
Q 047036 333 PGVQQLDIETGKIVTEWKFE-KDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMV-KG-DSPV 409 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH-~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~-gh-~s~V 409 (634)
++|.++|+.|++++.++... ..+ . .++|| +..++.+..+++|.++|+++.+ ++..+. +. ..++
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~~g----~-glt~D--------g~~l~vs~gs~~l~viD~~t~~-v~~~I~Vg~~~~p~ 151 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMKDG----W-GLATD--------GKILYGSDGTSILYEIDPHTFK-LIKKHNVKYNGHRV 151 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSSSC----C-EEEEC--------SSSEEEECSSSEEEEECTTTCC-EEEEEECEETTEEC
T ss_pred CEEEEEECCCCcEEEEEECCCCCe----E-EEEEC--------CCEEEEECCCCeEEEEECCCCc-EEEEEEECCCCccc
Confidence 69999999999999999644 222 2 57788 3445555678999999999854 344442 10 0010
Q ss_pred cccccccccccCcceEEEEECCCCeEEEEE-CCCcEEEEecccccccccccc--CC-----------CCCeEEEEECCCC
Q 047036 410 LHWTQGHQFSRGTNFQCFASTGDGSIVVGS-LDGKIRLYSKTSMRQAKTAFP--GL-----------GSPITHVDVTYDG 475 (634)
Q Consensus 410 ~~~~~g~~y~~~~~fssva~s~dG~IASGS-~DGtIRLWD~~t~r~akt~L~--GH-----------~d~ItsVdfSpDG 475 (634)
.....+.+. +|+|.+.. .+++|.+-|..+++ ....++ |. .+...+|+|+|+|
T Consensus 152 ------------~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~-V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~ 217 (266)
T 2iwa_A 152 ------------IRLNELEYI-NGEVWANIWQTDCIARISAKDGT-LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN 217 (266)
T ss_dssp ------------CCEEEEEEE-TTEEEEEETTSSEEEEEETTTCC-EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT
T ss_pred ------------ccceeEEEE-CCEEEEecCCCCeEEEEECCCCc-EEEEEECCCcccccccccccccCceEEEEEcCCC
Confidence 012344455 67766655 57899999998874 444433 21 1356899999999
Q ss_pred CEEEEEc--CCcEEEEEcc
Q 047036 476 KWILGTT--DTYLILICTL 492 (634)
Q Consensus 476 k~LlSS~--D~tIrLWD~~ 492 (634)
+.|..+. ..+|...++.
T Consensus 218 ~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 218 KRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp TEEEEEETTCSEEEEEEEE
T ss_pred CEEEEECCCCCeEEEEEEe
Confidence 9887643 5778777765
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.33 E-value=0.0023 Score=72.82 Aligned_cols=79 Identities=20% Similarity=0.265 Sum_probs=49.9
Q ss_pred CeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEecccccccccccc-CCC
Q 047036 385 NRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFP-GLG 463 (634)
Q Consensus 385 ~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~-GH~ 463 (634)
++|..||+++++ ++-.+. +..++ ......+.++.|++|+.||.+++||..+++ .+..+. +++
T Consensus 457 g~l~A~D~~tG~-~~W~~~-~~~~~--------------~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~-~lw~~~~~~~ 519 (677)
T 1kb0_A 457 GRLLAWDPVAQK-AAWSVE-HVSPW--------------NGGTLTTAGNVVFQGTADGRLVAYHAATGE-KLWEAPTGTG 519 (677)
T ss_dssp EEEEEEETTTTE-EEEEEE-ESSSC--------------CCCEEEETTTEEEEECTTSEEEEEETTTCC-EEEEEECSSC
T ss_pred cEEEEEeCCCCc-EEeecC-CCCCC--------------cCcceEeCCCEEEEECCCCcEEEEECCCCc-eeeeeeCCCC
Confidence 789999998864 333332 11110 112223456789999999999999999875 554443 343
Q ss_pred CCeEEEEECCCCCEEEE
Q 047036 464 SPITHVDVTYDGKWILG 480 (634)
Q Consensus 464 d~ItsVdfSpDGk~LlS 480 (634)
..-.-+.+++||+..++
T Consensus 520 ~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 520 VVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp CCSCCEEEEETTEEEEE
T ss_pred cccCCEEEEeCCEEEEE
Confidence 33344667899986665
No 233
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.32 E-value=0.37 Score=54.82 Aligned_cols=152 Identities=13% Similarity=0.176 Sum_probs=97.0
Q ss_pred ceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEecc--------CCCcceeEEEEecCCCCCCCCCCCEEE
Q 047036 308 KKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFE--------KDGTDITMRDITNDTKSSQLDPSESTF 379 (634)
Q Consensus 308 ~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH--------~~~V~I~vvsfsPd~K~~q~~~g~~la 379 (634)
...++.+.++++-+.... +-|.+||..+++...-.... .+. |.++..|.+ +..|.
T Consensus 359 V~~i~~d~~g~lWiGt~~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~----v~~i~~d~~------g~~lW 421 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTND-------GGLNLYNPITQRFTSYTLQEDESARGIGSNN----IKAVYVDEK------KSLVY 421 (795)
T ss_dssp EEEEEECTTSCEEEEESS-------SCEEEECTTTCCEEEECCC------CCSCSC----EEEEEEETT------TTEEE
T ss_pred eEEEEECCCCCEEEEECC-------CCeEEEcCCCCcEEEEecCCCCcccCCCCcc----EEEEEEcCC------CCEEE
Confidence 445666677776665433 35999999988765432211 122 234443311 44488
Q ss_pred EEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccc
Q 047036 380 LGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAF 459 (634)
Q Consensus 380 SGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L 459 (634)
.|+.++.|.++|++++. ++.+...... .....+.+++..++|.|-+|+. +-|.+||..+.+ .. .+
T Consensus 422 igt~~~Gl~~~d~~~~~--~~~~~~~~~~----------l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~-~~-~~ 486 (795)
T 4a2l_A 422 IGTHAGGLSILHRNSGQ--VENFNQRNSQ----------LVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRS-FT-TI 486 (795)
T ss_dssp EEETTTEEEEEETTTCC--EEEECTTTSC----------CSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTE-EE-EC
T ss_pred EEeCcCceeEEeCCCCc--EEEeecCCCC----------cCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCe-EE-Ec
Confidence 89999999999998754 2333210000 1233578888888898888888 457889976642 22 22
Q ss_pred c------C-CCCCeEEEEECCCCCEEEEEcCCcEEEEEcc
Q 047036 460 P------G-LGSPITHVDVTYDGKWILGTTDTYLILICTL 492 (634)
Q Consensus 460 ~------G-H~d~ItsVdfSpDGk~LlSS~D~tIrLWD~~ 492 (634)
. + ....|.+|...++|+..+++. +-|.+||..
T Consensus 487 ~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~ 525 (795)
T 4a2l_A 487 EKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQE 525 (795)
T ss_dssp CBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEE
T ss_pred cccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCC
Confidence 1 1 246899999999999888877 678888854
No 234
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.24 E-value=0.0017 Score=74.07 Aligned_cols=80 Identities=19% Similarity=0.190 Sum_probs=50.7
Q ss_pred CCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEecccccccccccc-CC
Q 047036 384 DNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFP-GL 462 (634)
Q Consensus 384 D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~-GH 462 (634)
+++|..||+++++ ++-.+..+.. .......+.+|.|++|+.||.||+||..+++ .+-.+. ++
T Consensus 454 ~g~l~A~D~~tG~-~~W~~~~~~~---------------~~~g~~~tagglvf~gt~dg~l~a~D~~tG~-~lw~~~~~~ 516 (689)
T 1yiq_A 454 SGKLIAWDPVKQQ-AAWEVPYVTI---------------FNGGTLSTAGNLVFEGSADGRVIAYAADTGE-KLWEQPAAS 516 (689)
T ss_dssp EEEEEEEETTTTE-EEEEEEESSS---------------CCCCEEEETTTEEEEECTTSEEEEEETTTCC-EEEEEECSS
T ss_pred ceeEEEEECCCCC-eEeEccCCCC---------------ccCccceECCCEEEEECCCCcEEEEECCCCc-cceeeeCCC
Confidence 3789999998864 3333321111 0112233567799999999999999999885 444443 23
Q ss_pred CCCeEEEEECCCCCEEEE
Q 047036 463 GSPITHVDVTYDGKWILG 480 (634)
Q Consensus 463 ~d~ItsVdfSpDGk~LlS 480 (634)
+..-.-+.|+.||+..++
T Consensus 517 ~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 517 GVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp CCCSCCEEEEETTEEEEE
T ss_pred CcccCceEEEECCEEEEE
Confidence 322234677899986665
No 235
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.23 E-value=0.0055 Score=65.78 Aligned_cols=130 Identities=11% Similarity=-0.000 Sum_probs=80.4
Q ss_pred CcEEEEeCCCCcEEEEEeccC-------CCcceeEEEEecCCCCCCCCCCCEEEEEeC--CCeEEEEEcCCCCceEEecc
Q 047036 333 PGVQQLDIETGKIVTEWKFEK-------DGTDITMRDITNDTKSSQLDPSESTFLGLD--DNRLCQWDMRDRSGIVQNMV 403 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~-------~~V~I~vvsfsPd~K~~q~~~g~~laSGS~--D~tIklWD~R~~~~~Vq~l~ 403 (634)
++|.+||+.|++++.++.... .. + ..+.|+|| |..++.+.. +++|-++|+.+++ ++.++.
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~-P-~~~a~spD--------Gk~lyVan~~~~~~VsVID~~t~~-vv~tI~ 177 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTY-P-WMTSLTPD--------GKTLLFYQFSPAPAVGVVDLEGKA-FKRMLD 177 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCC-G-GGEEECTT--------SSEEEEEECSSSCEEEEEETTTTE-EEEEEE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCC-C-ceEEEcCC--------CCEEEEEEcCCCCeEEEEECCCCc-EEEEEE
Confidence 589999999999999986421 01 1 23499999 566776653 7999999999864 556552
Q ss_pred cCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccc-ccccc----ccccCCCCCeE-EEEE-CCCC
Q 047036 404 KGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTS-MRQAK----TAFPGLGSPIT-HVDV-TYDG 475 (634)
Q Consensus 404 gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t-~r~ak----t~L~GH~d~It-sVdf-SpDG 475 (634)
- +-....++.+. .+++.+.||++-+.++.. ++ .. ..+.--..+|. ...| ++||
T Consensus 178 v------------------~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~-v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 178 V------------------PDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGT-PEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp C------------------CSEEEEEEEETTEEEEEETTSCEEEEECCSSSC-CEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred C------------------CCcceeecCCCceeEEECCCCCEEEEECCCCCe-EEEeecceeccccccccccceeEcCCC
Confidence 0 00011222222 455666777776666643 22 11 11111123332 2455 5899
Q ss_pred CEEEEEcCCcEEEEEcc
Q 047036 476 KWILGTTDTYLILICTL 492 (634)
Q Consensus 476 k~LlSS~D~tIrLWD~~ 492 (634)
+++..|.+++|.+.|+.
T Consensus 239 ~~~~vs~~g~V~v~d~~ 255 (386)
T 3sjl_D 239 RLVWPTYTGKIHQIDLS 255 (386)
T ss_dssp EEEEEBTTSEEEEEECT
T ss_pred cEEEEeCCCEEEEEECC
Confidence 88778888999999964
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.22 E-value=0.0044 Score=63.39 Aligned_cols=150 Identities=13% Similarity=0.197 Sum_probs=94.8
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEE-eCCCeEEEEEcCC
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLG-LDDNRLCQWDMRD 394 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSG-S~D~tIklWD~R~ 394 (634)
+..++.+++.+. ..+|+..|++||++++++....... -..++++ +..|+.. -.++++.++|+.+
T Consensus 52 ~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~~l~~~~F---geGit~~--------g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 52 NGYFYESTGLNG----RSSIRKVDIESGKTLQQIELGKRYF---GEGISDW--------KDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp TTEEEEEEEETT----EEEEEEECTTTCCEEEEEECCTTCC---EEEEEEE--------TTEEEEEESSSSEEEEEETTT
T ss_pred CCEEEEECCCCC----CceEEEEECCCCcEEEEEecCCccc---eeEEEEe--------CCEEEEEEeeCCEEEEEECcc
Confidence 445666666542 2489999999999999987654321 1234554 3455544 4589999999998
Q ss_pred CCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccccccccc--CCCCC---eEE
Q 047036 395 RSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFP--GLGSP---ITH 468 (634)
Q Consensus 395 ~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~--GH~d~---Its 468 (634)
.+ ++.++.-... ..+.+++| .|++....+.|+++|..+.+ ...+++ ..+.+ ++.
T Consensus 117 ~~-~~~ti~~~~e------------------G~glt~dg~~L~~SdGs~~i~~iDp~T~~-v~~~I~V~~~g~~~~~lNE 176 (262)
T 3nol_A 117 LR-QVRSFNYDGE------------------GWGLTHNDQYLIMSDGTPVLRFLDPESLT-PVRTITVTAHGEELPELNE 176 (262)
T ss_dssp CC-EEEEEECSSC------------------CCCEEECSSCEEECCSSSEEEEECTTTCS-EEEEEECEETTEECCCEEE
T ss_pred Cc-EEEEEECCCC------------------ceEEecCCCEEEEECCCCeEEEEcCCCCe-EEEEEEeccCCccccccce
Confidence 65 4566531000 01122344 67766668899999998864 444333 23334 455
Q ss_pred EEECCCCCEEEEE-cCCcEEEEEcccccCCCCeeeeec
Q 047036 469 VDVTYDGKWILGT-TDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 469 VdfSpDGk~LlSS-~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
+.+. +|+..+.. .++.|.++|.. +|+.+..+.
T Consensus 177 Le~~-~G~lyan~w~~~~I~vIDp~----tG~V~~~Id 209 (262)
T 3nol_A 177 LEWV-DGEIFANVWQTNKIVRIDPE----TGKVTGIID 209 (262)
T ss_dssp EEEE-TTEEEEEETTSSEEEEECTT----TCBEEEEEE
T ss_pred eEEE-CCEEEEEEccCCeEEEEECC----CCcEEEEEE
Confidence 7776 88755554 68899999975 677665443
No 237
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.20 E-value=0.0022 Score=65.58 Aligned_cols=127 Identities=17% Similarity=0.182 Sum_probs=80.3
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
+.|+.+|+.+|+++.+..... . . ....+ +..++.++.++.|..+|+++++. +-.......
T Consensus 249 g~l~~~d~~tG~~~w~~~~~~--~--~--~~~~~--------~~~l~~~~~~g~l~~~d~~tG~~-~w~~~~~~~----- 308 (376)
T 3q7m_A 249 GNLTALDLRSGQIMWKRELGS--V--N--DFIVD--------GNRIYLVDQNDRVMALTIDGGVT-LWTQSDLLH----- 308 (376)
T ss_dssp SCEEEEETTTCCEEEEECCCC--E--E--EEEEE--------TTEEEEEETTCCEEEEETTTCCE-EEEECTTTT-----
T ss_pred cEEEEEECCCCcEEeeccCCC--C--C--CceEE--------CCEEEEEcCCCeEEEEECCCCcE-EEeecccCC-----
Confidence 579999999999886654322 1 1 22222 46899999999999999998753 222210000
Q ss_pred ccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEEEcCCcEEEEE
Q 047036 413 TQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILIC 490 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlSS~D~tIrLWD 490 (634)
..+.+.+. .++.|++++.+|.|.+||..+++ .+..++..+..+.+.-+-.+|+.++.+.++.|..|+
T Consensus 309 ---------~~~~~~~~-~~~~l~v~~~~g~l~~~d~~tG~-~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 309 ---------RLLTSPVL-YNGNLVVGDSEGYLHWINVEDGR-FVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ---------SCCCCCEE-ETTEEEEECTTSEEEEEETTTCC-EEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred ---------CcccCCEE-ECCEEEEEeCCCeEEEEECCCCc-EEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 00111111 25799999999999999988874 444444333444432223466666668899998887
No 238
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.11 E-value=0.011 Score=63.97 Aligned_cols=72 Identities=13% Similarity=0.116 Sum_probs=53.2
Q ss_pred EEECCCC-eEEEEEC----------CCcEEEEeccccccccccccCCCCCeEEEEECCCCC-EEEEEc--CCcEEEEEcc
Q 047036 427 FASTGDG-SIVVGSL----------DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGK-WILGTT--DTYLILICTL 492 (634)
Q Consensus 427 va~s~dG-~IASGS~----------DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk-~LlSS~--D~tIrLWD~~ 492 (634)
++++++| +|+++.. .++|-+.|..+.+ ...+++ .+....+|.|+|||+ .|++++ +++|-++|+.
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k-vv~~I~-vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE-RINKIE-LGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC-EEEEEE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe-EEEEEE-CCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 5778886 6655532 4589999998864 555665 233579999999999 777744 8999999986
Q ss_pred cccCCCCeeeee
Q 047036 493 FSDKDGKTKTGF 504 (634)
Q Consensus 493 ~~~~~G~~~~gF 504 (634)
+++.+..+
T Consensus 402 ----t~kvv~tI 409 (426)
T 3c75_H 402 ----TGEELRSV 409 (426)
T ss_dssp ----TCCEEEEE
T ss_pred ----CCCEEEEe
Confidence 67766655
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.10 E-value=0.0012 Score=74.73 Aligned_cols=158 Identities=15% Similarity=0.108 Sum_probs=98.5
Q ss_pred cEEEEeCCC--CcE-EEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCC-----------ceE
Q 047036 334 GVQQLDIET--GKI-VTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRS-----------GIV 399 (634)
Q Consensus 334 TIrlWDleT--GK~-V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~-----------~~V 399 (634)
.|.+.|..+ |++ ++........ ..+.|+||+|+ .++++..+++|.++|+++.. +++
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~~P---hGv~~sPDGk~-------v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~ 324 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIANNP---HGCNMAPDKKH-------LCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV 324 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEESSC---CCEEECTTSSE-------EEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE
T ss_pred cEEEEeCcccCCceeEEEEecCCCc---eEEEEcCCCCE-------EEEeCCCCCeEEEEECcccccccccccCcccceE
Confidence 599999999 777 7777654432 23599999653 67777889999999998531 111
Q ss_pred EecccCCCCccccccccccccCcceEEEEECCCCeE-EEEECCCcEEEEecccc---------ccccccccCCCCCe---
Q 047036 400 QNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSI-VVGSLDGKIRLYSKTSM---------RQAKTAFPGLGSPI--- 466 (634)
Q Consensus 400 q~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~I-ASGS~DGtIRLWD~~t~---------r~akt~L~GH~d~I--- 466 (634)
..+. .+..-..++|+++|++ ++.-.|++|-.||.... .+...+++-|-.|-
T Consensus 325 ~~v~----------------vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~ 388 (595)
T 1fwx_A 325 AEPE----------------LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLK 388 (595)
T ss_dssp ECCB----------------CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEE
T ss_pred EEcC----------------CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccce
Confidence 1211 1122345689999964 45679999999997651 12334455443332
Q ss_pred --EEEEECCCCCEEEEEc----CCcE----------EEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCC
Q 047036 467 --THVDVTYDGKWILGTT----DTYL----------ILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLD 524 (634)
Q Consensus 467 --tsVdfSpDGk~LlSS~----D~tI----------rLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~ 524 (634)
.++.++|||+||++++ |..| .|+|+. .++...-.....+ +-||-..|.|.+
T Consensus 389 ~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis----~~~m~lv~d~p~~---~ePh~~~i~~~~ 455 (595)
T 1fwx_A 389 TVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDIS----GDKMVLVHDGPTF---AEPHDAIAVHPS 455 (595)
T ss_dssp ETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECS----SSSCEEEEEEEES---SCCCCEEEECTT
T ss_pred eccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcC----CCcEEEEEEEcCC---CCCCceEEccHH
Confidence 3456789999999854 4332 789973 3444333333332 445666655544
No 240
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.07 E-value=0.019 Score=58.07 Aligned_cols=151 Identities=11% Similarity=0.125 Sum_probs=93.6
Q ss_pred cceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCC
Q 047036 317 TNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRS 396 (634)
Q Consensus 317 ~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~ 396 (634)
..++.+++.+. ..+|+..|++||+++++........ . ..+++.+ +.+..+.-.+++++++|+.+.+
T Consensus 31 ~~LyestG~~g----~S~v~~vD~~tgkv~~~~~l~~~~f--g-eGi~~~~-------~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 31 GHLYESTGETG----RSSVRKVDLETGRILQRAEVPPPYF--G-AGIVAWR-------DRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp TEEEEEECCTT----SCEEEEEETTTCCEEEEEECCTTCC--E-EEEEEET-------TEEEEEESSSSEEEEEETTTTE
T ss_pred CEEEEECCCCC----CceEEEEECCCCCEEEEEeCCCCcc--e-eEEEEeC-------CEEEEEEeeCCEEEEEECCcCc
Confidence 45566666542 2589999999999999987654421 1 1334431 2344455568999999998864
Q ss_pred ceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEecccccccccccc--CCCC---CeEEEEE
Q 047036 397 GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFP--GLGS---PITHVDV 471 (634)
Q Consensus 397 ~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~--GH~d---~ItsVdf 471 (634)
++.++.... .. ..++ ..+++|+++..+++|.++|..+.+ ...+++ .++. .++.|.+
T Consensus 97 -~~~ti~~~~---------------~G-wglt-~dg~~L~vSdgs~~l~~iDp~t~~-~~~~I~V~~~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 97 -PRARFRYPG---------------EG-WALT-SDDSHLYMSDGTAVIRKLDPDTLQ-QVGSIKVTAGGRPLDNLNELEW 157 (243)
T ss_dssp -EEEEEECSS---------------CC-CEEE-ECSSCEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEE
T ss_pred -EEEEEeCCC---------------Cc-eEEe-eCCCEEEEECCCCeEEEEeCCCCe-EEEEEEEccCCcccccceeeEE
Confidence 456653110 01 1222 223467777779999999998864 333333 2333 3455665
Q ss_pred CCCCCEEEEE-cCCcEEEEEcccccCCCCeeeeec
Q 047036 472 TYDGKWILGT-TDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 472 SpDGk~LlSS-~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
. +|+..+.. .++.|.++|.. +|+.+..+.
T Consensus 158 ~-~G~lyanvw~s~~I~vIDp~----tG~V~~~id 187 (243)
T 3mbr_X 158 V-NGELLANVWLTSRIARIDPA----SGKVVAWID 187 (243)
T ss_dssp E-TTEEEEEETTTTEEEEECTT----TCBEEEEEE
T ss_pred e-CCEEEEEECCCCeEEEEECC----CCCEEEEEE
Confidence 5 77755554 58899999976 677655443
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.06 E-value=0.055 Score=55.25 Aligned_cols=134 Identities=11% Similarity=0.122 Sum_probs=86.0
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
+++.++|++|++++.++.....+. .+++| +..|+.....++|.++|+.+.+ ++.++.-.
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~~eG~-----glt~d--------g~~L~~SdGs~~i~~iDp~T~~-v~~~I~V~------- 165 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYDGEGW-----GLTHN--------DQYLIMSDGTPVLRFLDPESLT-PVRTITVT------- 165 (262)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCC-----CEEEC--------SSCEEECCSSSEEEEECTTTCS-EEEEEECE-------
T ss_pred CEEEEEECccCcEEEEEECCCCce-----EEecC--------CCEEEEECCCCeEEEEcCCCCe-EEEEEEec-------
Confidence 689999999999999998655432 45566 3455555557899999999864 34444210
Q ss_pred ccccccccCcceEEEEECCCCeEEEEE-CCCcEEEEeccccccccccc--cCC----------CCCeEEEEECCCCCEEE
Q 047036 413 TQGHQFSRGTNFQCFASTGDGSIVVGS-LDGKIRLYSKTSMRQAKTAF--PGL----------GSPITHVDVTYDGKWIL 479 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~dG~IASGS-~DGtIRLWD~~t~r~akt~L--~GH----------~d~ItsVdfSpDGk~Ll 479 (634)
..++.. . .+.-+.+. +|+|.++. .+++|.+-|..+++ ....+ .++ .+--++|+++|+++.|.
T Consensus 166 ~~g~~~-~--~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~-V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lf 240 (262)
T 3nol_A 166 AHGEEL-P--ELNELEWV-DGEIFANVWQTNKIVRIDPETGK-VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLF 240 (262)
T ss_dssp ETTEEC-C--CEEEEEEE-TTEEEEEETTSSEEEEECTTTCB-EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEE
T ss_pred cCCccc-c--ccceeEEE-CCEEEEEEccCCeEEEEECCCCc-EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEE
Confidence 001110 0 11222333 67776666 58899999998874 33222 221 24568999999999998
Q ss_pred EEcCCcEEEEEcc
Q 047036 480 GTTDTYLILICTL 492 (634)
Q Consensus 480 SS~D~tIrLWD~~ 492 (634)
.+...-=+||.++
T Consensus 241 VTGK~Wp~~~ev~ 253 (262)
T 3nol_A 241 VTGKLWPKVFEIT 253 (262)
T ss_dssp EEETTCSEEEEEE
T ss_pred EECCCCCceEEEE
Confidence 8777655555554
No 242
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.00 E-value=0.0099 Score=64.46 Aligned_cols=132 Identities=11% Similarity=-0.067 Sum_probs=83.3
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe----------CCCeEEEEEcCCCCceEEec
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL----------DDNRLCQWDMRDRSGIVQNM 402 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS----------~D~tIklWD~R~~~~~Vq~l 402 (634)
++|.+.|+.|++++.++..-.. + . +.|+||+ ..++.+. .+++|.++|+++.+ ++.++
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~--P-g-ia~SpDg--------k~lyVan~~~~~~~~G~~~~~VsviD~~t~~-vv~~I 165 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFL--P-H-PVAAEDG--------SFFAQASTVFERIARGKRTDYVEVFDPVTFL-PIADI 165 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSS--C-E-EEECTTS--------SCEEEEEEEEEETTEEEEEEEEEEECTTTCC-EEEEE
T ss_pred CeEEEEECCCCEEEEEEECCCC--C-c-eEECCCC--------CEEEEEeccccccccCCCCCEEEEEECCCCc-EEEEE
Confidence 5899999999999999986544 2 3 4899994 4566654 47899999999864 45554
Q ss_pred ccC-CCCccccccccccccCcceEEEEECCCC-eEEEEEC--CCcEEEEeccccccccccccCCCCCeEEEEECCCC-CE
Q 047036 403 VKG-DSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSL--DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDG-KW 477 (634)
Q Consensus 403 ~gh-~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~--DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDG-k~ 477 (634)
.-- ... +.....-..++++||| +|+++.. +++|-+.|..+++ ...+++- +. ++.+.|+| +.
T Consensus 166 ~v~g~~r---------~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k-vv~~I~v-~g---~~~~~p~g~~~ 231 (426)
T 3c75_H 166 ELPDAPR---------FLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT-FDRMLDV-PD---CYHIFPASPTV 231 (426)
T ss_dssp EETTCCC---------CCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE-EEEEEEC-CS---EEEEEEEETTE
T ss_pred ECCCccc---------cccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe-EEEEEEc-CC---ceeeccCCCcE
Confidence 200 000 0000001134789999 7888774 6899999998864 4445542 11 13445555 33
Q ss_pred EEE-EcCCcEEEEEc
Q 047036 478 ILG-TTDTYLILICT 491 (634)
Q Consensus 478 LlS-S~D~tIrLWD~ 491 (634)
+++ +.|+.+.+.+.
T Consensus 232 ~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 232 FYMNCRDGSLARVDF 246 (426)
T ss_dssp EEEEETTSSEEEEEC
T ss_pred EEEEcCCCCEEEEEC
Confidence 334 66777777765
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.95 E-value=0.0091 Score=61.25 Aligned_cols=147 Identities=11% Similarity=0.036 Sum_probs=93.0
Q ss_pred cceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCC
Q 047036 317 TNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRS 396 (634)
Q Consensus 317 ~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~ 396 (634)
..++.+++.+ +.|+..|++||++++++ -.... ....+++++ +.+.++.-.++.++++|+.+.+
T Consensus 65 ~~Ly~stG~~------g~v~~iD~~Tgkv~~~~-l~~~~---FgeGit~~g-------~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 65 GHFFESTGHQ------GTLRQLSLESAQPVWME-RLGNI---FAEGLASDG-------ERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp TEEEEEETTT------TEEEECCSSCSSCSEEE-ECTTC---CEEEEEECS-------SCEEEEESSSCEEEEEETTTTE
T ss_pred CEEEEEcCCC------CEEEEEECCCCcEEeEE-CCCCc---ceeEEEEeC-------CEEEEEEccCCEEEEEECCcCc
Confidence 4556666664 57999999999999998 43321 112345552 2455555578999999999864
Q ss_pred ceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEecccccccccccc--CCCC---CeEEEE
Q 047036 397 GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMRQAKTAFP--GLGS---PITHVD 470 (634)
Q Consensus 397 ~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r~akt~L~--GH~d---~ItsVd 470 (634)
++.++..... . ..++ ++| +|+++..++.|+++|..+.+ ...+++ .++. .++.|.
T Consensus 128 -~~~ti~~~~e-------------G---wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~-v~~~I~V~~~g~~v~~lNeLe 187 (268)
T 3nok_A 128 -RERTTRYSGE-------------G---WGLC--YWNGKLVRSDGGTMLTFHEPDGFA-LVGAVQVKLRGQPVELINELE 187 (268)
T ss_dssp -EEEEEECSSC-------------C---CCEE--EETTEEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEE
T ss_pred -EEEEEeCCCc-------------e---eEEe--cCCCEEEEECCCCEEEEEcCCCCe-EEEEEEeCCCCcccccccccE
Confidence 4566531100 0 1122 344 67777779999999998864 343333 3333 346677
Q ss_pred ECCCCCEEEEE-cCCcEEEEEcccccCCCCeeeeec
Q 047036 471 VTYDGKWILGT-TDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 471 fSpDGk~LlSS-~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
+. ||+..+.. .++.|.++|.. +|+.+..+.
T Consensus 188 ~~-dG~lyanvw~s~~I~vIDp~----TG~V~~~Id 218 (268)
T 3nok_A 188 CA-NGVIYANIWHSSDVLEIDPA----TGTVVGVID 218 (268)
T ss_dssp EE-TTEEEEEETTCSEEEEECTT----TCBEEEEEE
T ss_pred Ee-CCEEEEEECCCCeEEEEeCC----CCcEEEEEE
Confidence 77 88655554 58899999975 677655443
No 244
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.89 E-value=0.0023 Score=67.91 Aligned_cols=97 Identities=8% Similarity=-0.039 Sum_probs=66.4
Q ss_pred cEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe----------CCCeEEEEEcCCCCceEEecc
Q 047036 334 GVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL----------DDNRLCQWDMRDRSGIVQNMV 403 (634)
Q Consensus 334 TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS----------~D~tIklWD~R~~~~~Vq~l~ 403 (634)
+|.+.|+.|++++.++...... . +.|+|| +..++.+. .+++|.+||+.+.+ ++.++.
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P---~-i~~spD--------g~~lyVan~~~~r~~~G~~~~~VsviD~~T~~-vv~~I~ 113 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS---L-AVAGHS--------GSDFALASTSFARSAKGKRTDYVEVFDPVTFL-PIADIE 113 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC---E-EEECTT--------SSCEEEEEEEETTTTSSSEEEEEEEECTTTCC-EEEEEE
T ss_pred eEEEEECCCCeEEEEEeCCCCC---c-eEECCC--------CCEEEEEcccccccccCCCCCEEEEEECCCCC-EEEEEE
Confidence 7999999999999999765542 3 499999 45666665 48999999999865 456653
Q ss_pred cCCCCccccccccccccCcceEEEEECCCC-eEEEEEC--CCcEEE--Eeccc
Q 047036 404 KGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSL--DGKIRL--YSKTS 451 (634)
Q Consensus 404 gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~--DGtIRL--WD~~t 451 (634)
-... ..+.....-..++++||| +|+++.. .+.|.+ +|..+
T Consensus 114 v~~~--------~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 114 LPDA--------PRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp ETTS--------CSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCCc--------cccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 1100 000000111245789999 7888875 467999 99866
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.87 E-value=0.077 Score=51.60 Aligned_cols=144 Identities=7% Similarity=-0.016 Sum_probs=84.6
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCC
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDR 395 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~ 395 (634)
++.+++++... +.|+.+|+.+++........-... .-++++|++ +.+.++-...++|.++|+...
T Consensus 47 ~~~ly~~d~~~------~~I~~~~~~g~~~~~~~~~~~~~p--~~ia~d~~~-------~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 47 DKVVYWTDISE------PSIGRASLHGGEPTTIIRQDLGSP--EGIALDHLG-------RTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp TTEEEEEETTT------TEEEEEESSSCCCEEEECTTCCCE--EEEEEETTT-------TEEEEEETTTTEEEEEETTSC
T ss_pred CCEEEEEECCC------CEEEEEecCCCCcEEEEECCCCCc--cEEEEEecC-------CeEEEEECCCCEEEEEEcCCC
Confidence 34455555443 689999998665433332221222 344888862 234555566789999998643
Q ss_pred CceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEEEC---CCcEEEEeccccccccccc-cCCCCCeEEEE
Q 047036 396 SGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVGSL---DGKIRLYSKTSMRQAKTAF-PGLGSPITHVD 470 (634)
Q Consensus 396 ~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASGS~---DGtIRLWD~~t~r~akt~L-~GH~d~ItsVd 470 (634)
.. ..+... + -..-..+++++ +|+|..+.. .+.|..++..+. ....+ ........+|+
T Consensus 112 ~~--~~~~~~---------~-----~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~--~~~~~~~~~~~~P~gia 173 (267)
T 1npe_A 112 QR--RVLFDT---------G-----LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT--NRRILAQDNLGLPNGLT 173 (267)
T ss_dssp SC--EEEECS---------S-----CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC--CCEEEECTTCSCEEEEE
T ss_pred CE--EEEEEC---------C-----CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC--CcEEEEECCCCCCcEEE
Confidence 21 222100 0 01235678888 567766654 368888887642 22222 12224578999
Q ss_pred ECCCCCEEE-E-EcCCcEEEEEcc
Q 047036 471 VTYDGKWIL-G-TTDTYLILICTL 492 (634)
Q Consensus 471 fSpDGk~Ll-S-S~D~tIrLWD~~ 492 (634)
++|+|.+|. + +..+.|..+|..
T Consensus 174 ~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 174 FDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEETT
T ss_pred EcCCCCEEEEEECCCCEEEEEecC
Confidence 999988775 4 556889999853
No 246
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.80 E-value=1 Score=50.97 Aligned_cols=150 Identities=9% Similarity=0.137 Sum_probs=94.2
Q ss_pred ceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEE---eccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC
Q 047036 308 KKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEW---KFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD 384 (634)
Q Consensus 308 ~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~l---kgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D 384 (634)
...++.+.++++.+.... +-|.++|..+++...-. ..... .|.++..+. ...|..|+.+
T Consensus 365 v~~i~~d~~g~lWigt~~-------~Gl~~~~~~~~~~~~~~~~~~~~~~----~v~~i~~d~-------~g~lWigt~~ 426 (781)
T 3v9f_A 365 VSSVCDDGQGKLWIGTDG-------GGINVFENGKRVAIYNKENRELLSN----SVLCSLKDS-------EGNLWFGTYL 426 (781)
T ss_dssp EEEEEECTTSCEEEEEBS-------SCEEEEETTEEEEECC-----CCCS----BEEEEEECT-------TSCEEEEETT
T ss_pred eEEEEEcCCCCEEEEeCC-------CcEEEEECCCCeEEEccCCCCCCCc----ceEEEEECC-------CCCEEEEecc
Confidence 455666666776665433 35999999876543211 11122 234555442 1357778888
Q ss_pred CeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccc--c--
Q 047036 385 NRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAF--P-- 460 (634)
Q Consensus 385 ~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L--~-- 460 (634)
+.|.++|++++. ++.+.. . . .....+.+++..++|.|-+|+. +-|.+||..+.+ ..... .
T Consensus 427 ~Gl~~~~~~~~~--~~~~~~-~-~----------~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~-~~~~~~~~~~ 490 (781)
T 3v9f_A 427 GNISYYNTRLKK--FQIIEL-E-K----------NELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKK-VIHHYDTSNS 490 (781)
T ss_dssp EEEEEECSSSCE--EEECCS-T-T----------TCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSS-CCEEECTTTS
T ss_pred CCEEEEcCCCCc--EEEecc-C-C----------CCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCe-EEecccCccc
Confidence 899999998653 233310 0 0 1223578888888998888888 568889976642 22111 1
Q ss_pred -CCCCCeEEEEECCCCCEEEEEcCCcEEEEEc
Q 047036 461 -GLGSPITHVDVTYDGKWILGTTDTYLILICT 491 (634)
Q Consensus 461 -GH~d~ItsVdfSpDGk~LlSS~D~tIrLWD~ 491 (634)
.....|.+|...++|+..++|..+-|..+|.
T Consensus 491 ~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~ 522 (781)
T 3v9f_A 491 QLLENFVRSIAQDSEGRFWIGTFGGGVGIYTP 522 (781)
T ss_dssp SCSCSCEEEEEECTTCCEEEEESSSCEEEECT
T ss_pred ccccceeEEEEEcCCCCEEEEEcCCCEEEEeC
Confidence 1246899999999999888887556777874
No 247
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.77 E-value=0.24 Score=49.87 Aligned_cols=131 Identities=12% Similarity=0.173 Sum_probs=82.5
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEeccc--CCCCcc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVK--GDSPVL 410 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~g--h~s~V~ 410 (634)
+++.++|.+|++++.++.....+. .++++ +..|+.+-.+++|.++|+.+.+ ++.++.- +..++
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~~~Gw-----glt~d--------g~~L~vSdgs~~l~~iDp~t~~-~~~~I~V~~~g~~~- 149 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYPGEGW-----ALTSD--------DSHLYMSDGTAVIRKLDPDTLQ-QVGSIKVTAGGRPL- 149 (243)
T ss_dssp SEEEEEETTTTEEEEEEECSSCCC-----EEEEC--------SSCEEEECSSSEEEEECTTTCC-EEEEEECEETTEEC-
T ss_pred CEEEEEECCcCcEEEEEeCCCCce-----EEeeC--------CCEEEEECCCCeEEEEeCCCCe-EEEEEEEccCCccc-
Confidence 689999999999999998655442 45666 3445555568999999999864 3444421 11111
Q ss_pred ccccccccccCcceEEEEECCCCeEEEEE-CCCcEEEEecccccccccccc--C-----------CCCCeEEEEECCCCC
Q 047036 411 HWTQGHQFSRGTNFQCFASTGDGSIVVGS-LDGKIRLYSKTSMRQAKTAFP--G-----------LGSPITHVDVTYDGK 476 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~dG~IASGS-~DGtIRLWD~~t~r~akt~L~--G-----------H~d~ItsVdfSpDGk 476 (634)
. .+.-+... +|+|.+.. .+..|.+-|..+++ ....+. + -.+--++|+++|+++
T Consensus 150 --------~---~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~-V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~ 216 (243)
T 3mbr_X 150 --------D---NLNELEWV-NGELLANVWLTSRIARIDPASGK-VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD 216 (243)
T ss_dssp --------C---CEEEEEEE-TTEEEEEETTTTEEEEECTTTCB-EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT
T ss_pred --------c---cceeeEEe-CCEEEEEECCCCeEEEEECCCCC-EEEEEECCcCccccccccCCcCCceEEEEEcCCCC
Confidence 0 11112222 67766665 57899999998864 222211 1 224568999999999
Q ss_pred EEEEEcCCcEEEEEc
Q 047036 477 WILGTTDTYLILICT 491 (634)
Q Consensus 477 ~LlSS~D~tIrLWD~ 491 (634)
.|..|-..-=+||.+
T Consensus 217 ~lfVTGK~wp~~~~v 231 (243)
T 3mbr_X 217 RLFVTGKRWPMLYEI 231 (243)
T ss_dssp EEEEEETTCSEEEEE
T ss_pred EEEEECCCCCcEEEE
Confidence 888755544444443
No 248
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.71 E-value=0.024 Score=64.92 Aligned_cols=131 Identities=12% Similarity=0.042 Sum_probs=75.6
Q ss_pred CcEEEEeCCCC-cEEE-EEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC-----CeEEEEEcCCCCce-EEeccc
Q 047036 333 PGVQQLDIETG-KIVT-EWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD-----NRLCQWDMRDRSGI-VQNMVK 404 (634)
Q Consensus 333 ~TIrlWDleTG-K~V~-~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D-----~tIklWD~R~~~~~-Vq~l~g 404 (634)
.+|+++|+++| +.+. .+.... .-.+|+|| ++.|+..+.| ..|++|++.++... +..+..
T Consensus 201 ~~l~v~dl~~g~~~l~~~~~~~~-----~~~~WspD--------g~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~ 267 (751)
T 2xe4_A 201 YTIEFKRISDPSQTIADKVSGTN-----GEIVWGPD--------HTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEE 267 (751)
T ss_dssp EEEEEEETTCTTCCCCCCEEEEC-----SCCEECSS--------TTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEEC
T ss_pred EEEEEEECCCCCEeCCccccCce-----eeEEEecC--------CCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEec
Confidence 47999999999 7432 122221 12389999 4556655655 36888888764321 111110
Q ss_pred CCCCccccccccccccCcceEEEEECCCC-eEEEEE---CCCcEEEEeccccc-cc--cccccCCCCCeEEEEECCCCCE
Q 047036 405 GDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGS---LDGKIRLYSKTSMR-QA--KTAFPGLGSPITHVDVTYDGKW 477 (634)
Q Consensus 405 h~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS---~DGtIRLWD~~t~r-~a--kt~L~GH~d~ItsVdfSpDGk~ 477 (634)
. . ..-+..+.+|+|| +||..+ ....|+++|+.+.. .. +..+++...+..+++|+. |++
T Consensus 268 ~---------~-----~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~ 332 (751)
T 2xe4_A 268 H---------N-----PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSH 332 (751)
T ss_dssp C---------C-----TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTE
T ss_pred C---------C-----CceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCE
Confidence 0 0 0113467889999 676655 34578889987642 12 344556667778877654 555
Q ss_pred EEE-EcC---C--cEEEEEc
Q 047036 478 ILG-TTD---T--YLILICT 491 (634)
Q Consensus 478 LlS-S~D---~--tIrLWD~ 491 (634)
|+- |.. . .|.++|+
T Consensus 333 l~~~t~~~~a~~~~L~~~d~ 352 (751)
T 2xe4_A 333 LVILTNEGGAVNHKLLIAPR 352 (751)
T ss_dssp EEEEECTTTCTTCEEEEEET
T ss_pred EEEEeCCCCCCCcEEEEEcC
Confidence 544 543 2 4555554
No 249
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.57 E-value=0.16 Score=56.83 Aligned_cols=60 Identities=15% Similarity=0.174 Sum_probs=39.1
Q ss_pred CcEEEEeCCCCcEEEEEec--cCC----Ccc-eeEEEEe-cCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCc
Q 047036 333 PGVQQLDIETGKIVTEWKF--EKD----GTD-ITMRDIT-NDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSG 397 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkg--H~~----~V~-I~vvsfs-Pd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~ 397 (634)
++|+.+|+.||+++-.++. |.. .+. ..+.... .++|. -..++.++.++.|+++|.++++.
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~-----~~~v~~~~~~G~l~~lD~~tG~~ 358 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKI-----VKATAHADRNGFFYVVDRSNGKL 358 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCE-----EEEEEEECTTSEEEEEETTTCCE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCE-----EEEEEEECCCceEEEEECCCCCE
Confidence 5899999999999988764 321 110 0121221 33210 03788999999999999998753
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.52 E-value=0.045 Score=54.94 Aligned_cols=155 Identities=8% Similarity=0.075 Sum_probs=88.2
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccC--------------------CCcceeEEEEec
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEK--------------------DGTDITMRDITN 365 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~--------------------~~V~I~vvsfsP 365 (634)
.|.++. .+.+++++.++..+ +.|+.||..++++ ..|.... ..+ .-+++.|
T Consensus 20 ~p~~i~-~d~~g~~l~v~~~~------~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p--~gi~~~~ 89 (322)
T 2fp8_A 20 APNSFT-FDSTNKGFYTSVQD------GRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRT--YDISYNL 89 (322)
T ss_dssp CCCCEE-CCTTCSSEEEECTT------SEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCE--EEEEEET
T ss_pred CceEEE-EcCCCCEEEEEcCC------CeEEEECCCCCce-EEEecccccccccccccccchhccccCCCC--ceEEEcC
Confidence 344433 23445545555433 5899999987654 4443210 111 2346776
Q ss_pred CCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEEEC----
Q 047036 366 DTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVGSL---- 440 (634)
Q Consensus 366 d~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASGS~---- 440 (634)
+ ...|+.+...+.|.++|+.++. +..+.... .+.. -.....+++.+ +|.|.++..
T Consensus 90 ~--------~g~l~v~d~~~~i~~~d~~~g~--~~~~~~~~-------~~~~---~~~p~~i~~d~~~G~l~v~d~~~~~ 149 (322)
T 2fp8_A 90 Q--------NNQLYIVDCYYHLSVVGSEGGH--ATQLATSV-------DGVP---FKWLYAVTVDQRTGIVYFTDVSTLY 149 (322)
T ss_dssp T--------TTEEEEEETTTEEEEECTTCEE--CEEEESEE-------TTEE---CSCEEEEEECTTTCCEEEEESCSSC
T ss_pred C--------CCcEEEEECCCCEEEEeCCCCE--EEEecccC-------CCCc---ccccceEEEecCCCEEEEECCcccc
Confidence 2 2356666666779999987532 22332100 0111 11245678899 897666543
Q ss_pred --------------CCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEE-E-EcCCcEEEEEcc
Q 047036 441 --------------DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWIL-G-TTDTYLILICTL 492 (634)
Q Consensus 441 --------------DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~Ll-S-S~D~tIrLWD~~ 492 (634)
+|.|..||..+++ ......+. ....+|+|+|||++|. + +..+.|..+++.
T Consensus 150 ~~~~~~~~~~~~~~~g~v~~~d~~~~~-~~~~~~~~-~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 150 DDRGVQQIMDTSDKTGRLIKYDPSTKE-TTLLLKEL-HVPGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp CTTCHHHHHHHTCCCEEEEEEETTTTE-EEEEEEEE-SCCCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred cccccceehcccCCCceEEEEeCCCCE-EEEeccCC-ccCcceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 3678888876542 32222222 2347899999999654 5 567889999864
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.41 E-value=0.026 Score=62.91 Aligned_cols=77 Identities=17% Similarity=0.277 Sum_probs=46.4
Q ss_pred CCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEecccccccccccc-C-
Q 047036 384 DNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFP-G- 461 (634)
Q Consensus 384 D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~-G- 461 (634)
++.|..||+++++. +-.+.. ..+ ...+...+.+|.|++|+.||.|+.||..+++ .+-.++ +
T Consensus 443 ~g~l~a~D~~tG~~-~W~~~~-~~~--------------~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~-~lw~~~~~~ 505 (571)
T 2ad6_A 443 MGQIRAFDLTTGKA-KWTKWE-KFA--------------AWGGTLYTKGGLVWYATLDGYLKALDNKDGK-ELWNFKMPS 505 (571)
T ss_dssp CEEEEEECTTTCCE-EEEEEE-SSC--------------CCSBCEEETTTEEEEECTTSEEEEEETTTCC-EEEEEECSS
T ss_pred CCeEEEEECCCCCE-EEEecC-CCC--------------ccceeEEECCCEEEEEcCCCeEEEEECCCCC-EEEEEeCCC
Confidence 47889999887653 333210 000 0111123457788899999999999998875 444443 2
Q ss_pred --CCCCeEEEEECCCCCEEEE
Q 047036 462 --LGSPITHVDVTYDGKWILG 480 (634)
Q Consensus 462 --H~d~ItsVdfSpDGk~LlS 480 (634)
++.| +.+.+||+.+++
T Consensus 506 ~~~~~p---~~~~~~G~~yv~ 523 (571)
T 2ad6_A 506 GGIGSP---MTYSFKGKQYIG 523 (571)
T ss_dssp CCCSCC---EEEEETTEEEEE
T ss_pred CcEeee---EEEEECCEEEEE
Confidence 2233 335688886665
No 252
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.39 E-value=0.054 Score=59.49 Aligned_cols=146 Identities=10% Similarity=0.021 Sum_probs=91.3
Q ss_pred CCcceEEecCCCCCCCCCCcEEEEeCCCC----cEEEEEe--------ccCCCcceeEEEEecCCCCCCCCCCCEEEEEe
Q 047036 315 GETNMMLMSPLKDGKPQAPGVQQLDIETG----KIVTEWK--------FEKDGTDITMRDITNDTKSSQLDPSESTFLGL 382 (634)
Q Consensus 315 ~D~~mllsss~d~~~~~~~TIrlWDleTG----K~V~~lk--------gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS 382 (634)
.+++.|+..+... .+|++.|+.+- +++++++ |-+. + .-+.++|+ | +.+++.
T Consensus 93 ~~r~~l~v~~l~s-----~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~--P-h~~~~~pd--------G-i~Vs~~ 155 (462)
T 2ece_A 93 IERRFLIVPGLRS-----SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSR--L-HTVHCGPD--------A-IYISAL 155 (462)
T ss_dssp CCSCEEEEEBTTT-----CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEE--E-EEEEECSS--------C-EEEEEE
T ss_pred ccCCEEEEccCCC-----CeEEEEECCCCCCCceeeeeechhhcccccCCCc--c-cceeECCC--------e-EEEEcC
Confidence 6677777665543 79999999877 8888873 1111 0 11266787 5 777777
Q ss_pred CC------CeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCe-EEEEE----------------
Q 047036 383 DD------NRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGS-IVVGS---------------- 439 (634)
Q Consensus 383 ~D------~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~-IASGS---------------- 439 (634)
.+ +.|.+.|.++.+ ++.++.--..+ ++ ..+. +.++|++. +++..
T Consensus 156 g~~~g~~~g~v~vlD~~T~~-v~~~~~~~~~~-----~~----~~Yd---~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~ 222 (462)
T 2ece_A 156 GNEEGEGPGGILMLDHYSFE-PLGKWEIDRGD-----QY----LAYD---FWWNLPNEVLVSSEWAVPNTIEDGLKLEHL 222 (462)
T ss_dssp EETTSCSCCEEEEECTTTCC-EEEECCSBCTT-----CC----CCCC---EEEETTTTEEEECBCCCHHHHTTCCCTTTH
T ss_pred CCcCCCCCCeEEEEECCCCe-EEEEEccCCCC-----cc----ccce---EEECCCCCEEEEccCcCccccccccchhhh
Confidence 76 899999999864 45555310000 00 1111 35678884 44442
Q ss_pred ---CCCcEEEEecccccccccccc-C-CCCCeEEEEE--CCCCCEEEE--E-----cCCcEEEEEc
Q 047036 440 ---LDGKIRLYSKTSMRQAKTAFP-G-LGSPITHVDV--TYDGKWILG--T-----TDTYLILICT 491 (634)
Q Consensus 440 ---~DGtIRLWD~~t~r~akt~L~-G-H~d~ItsVdf--SpDGk~LlS--S-----~D~tIrLWD~ 491 (634)
...+|.+||+.+++ ...+++ | .+.....|.| +|||+++.. - .+++|.+|..
T Consensus 223 ~~~~~d~V~v~D~~~~k-~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 223 KDRYGNRIHFWDLRKRK-RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp HHHSCCEEEEEETTTTE-EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred hhccCCEEEEEECCCCc-EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence 37999999998753 444454 2 2234567766 999999876 3 4568877764
No 253
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.37 E-value=0.8 Score=44.29 Aligned_cols=174 Identities=8% Similarity=-0.042 Sum_probs=93.7
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccC-CCcceeEEEEecCCCCCCCCCCCEEEEEeC-
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEK-DGTDITMRDITNDTKSSQLDPSESTFLGLD- 383 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~-~~V~I~vvsfsPd~K~~q~~~g~~laSGS~- 383 (634)
.|.++.+....+.+++++... +.|.++|+. |+..+.+.... .. + .-++++|+ +..|+.+..
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~------~~I~~~~~~-g~~~~~~~~~~~~~-P-~~i~vd~~--------~g~lyv~~~~ 142 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQL------DRIEVAKMD-GTQRRVLFDTGLVN-P-RGIVTDPV--------RGNLYWTDWN 142 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTT------TEEEEEETT-SCSCEEEECSSCSS-E-EEEEEETT--------TTEEEEEECC
T ss_pred CccEEEEEecCCeEEEEECCC------CEEEEEEcC-CCCEEEEEECCCCC-c-cEEEEeeC--------CCEEEEEECC
Confidence 565544432345566666543 589999987 43333332111 22 2 23488886 345554443
Q ss_pred --CCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEE-EECCCcEEEEeccccccccccc
Q 047036 384 --DNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVV-GSLDGKIRLYSKTSMRQAKTAF 459 (634)
Q Consensus 384 --D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IAS-GS~DGtIRLWD~~t~r~akt~L 459 (634)
.++|.++++.... .+.+.. .. -..-..+++++++ +|.+ -+..+.|..+|..+.. ....+
T Consensus 143 ~~~~~I~~~~~dg~~--~~~~~~--~~------------~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~ 205 (267)
T 1npe_A 143 RDNPKIETSHMDGTN--RRILAQ--DN------------LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG-RRKVL 205 (267)
T ss_dssp SSSCEEEEEETTSCC--CEEEEC--TT------------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE-EEEEE
T ss_pred CCCcEEEEEecCCCC--cEEEEE--CC------------CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc-eEEEe
Confidence 4688888876432 122210 00 0113567888864 6654 4566899999987642 33444
Q ss_pred cCCCCCeEEEEECCCCCEEE-E-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCC
Q 047036 460 PGLGSPITHVDVTYDGKWIL-G-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPL 523 (634)
Q Consensus 460 ~GH~d~ItsVdfSpDGk~Ll-S-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe 523 (634)
.+...| .+|++. +.+|. + ...+.|..+|.. .|+.+..+.- + ..|.|.-+.+.|.
T Consensus 206 ~~~~~P-~gi~~d--~~~lyva~~~~~~v~~~d~~----~g~~~~~i~~--g-~~~~p~gi~~~~~ 261 (267)
T 1npe_A 206 EGLQYP-FAVTSY--GKNLYYTDWKTNSVIAMDLA----ISKEMDTFHP--H-KQTRLYGITIALS 261 (267)
T ss_dssp ECCCSE-EEEEEE--TTEEEEEETTTTEEEEEETT----TTEEEEEECC--S-SCCCCCCEEEECS
T ss_pred cCCCCc-eEEEEe--CCEEEEEECCCCeEEEEeCC----CCCceEEEcc--c-cccccceeeecCc
Confidence 443333 677764 44554 4 446889999864 4665555431 1 1133445554444
No 254
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.26 E-value=0.11 Score=55.55 Aligned_cols=152 Identities=13% Similarity=0.123 Sum_probs=85.4
Q ss_pred CcceeeEEe-CCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeC-
Q 047036 306 TPKKALLMR-GETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLD- 383 (634)
Q Consensus 306 sP~~~mL~~-~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~- 383 (634)
.|..+.+.. .+++++++... ..|+++|+.++++..... ..... .-++|+|+ ++.|+.+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~-------~~I~~id~~~~~v~~~~~-~~~~P--~~ia~d~~--------G~~lyvad~~ 199 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ-------HPTRLIDFEKEYVSTVYS-GLSKV--RTICWTHE--------ADSMIITNDQ 199 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT-------EEEEEEETTTTEEEEEEC-CCSCE--EEEEECTT--------SSEEEEEECC
T ss_pred CCCEEEECCCCCCeEEEEeCC-------CcEEEEECCCCEEEEEec-CCCCc--ceEEEeCC--------CCEEEEEeCC
Confidence 466654432 34556666543 479999999776544433 22222 34588887 564555443
Q ss_pred CC----eEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEEE-CCCcEEEEecccccc-cc
Q 047036 384 DN----RLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVGS-LDGKIRLYSKTSMRQ-AK 456 (634)
Q Consensus 384 D~----tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASGS-~DGtIRLWD~~t~r~-ak 456 (634)
.+ .+...+....-.....+.. -.....++++| +|+|.++. ..+.|+.||..+... ..
T Consensus 200 ~~~~~~~v~~~~~~g~~~~~~~l~~----------------~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 200 NNNDRPNNYILTRESGFKVITELTK----------------GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp SCTTSEEEEEEEGGGTSCSEEEEEE----------------CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCcccceEEEEeCCCceeeeeeecc----------------CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 22 3444443321110112210 01124567888 78766654 668999999875421 11
Q ss_pred ccccCCCCCeEEEEECCCCCEEE-E-EcCCcEEEEEcc
Q 047036 457 TAFPGLGSPITHVDVTYDGKWIL-G-TTDTYLILICTL 492 (634)
Q Consensus 457 t~L~GH~d~ItsVdfSpDGk~Ll-S-S~D~tIrLWD~~ 492 (634)
..+++. ..-.+|+|+|+|++|. + +..++|..++..
T Consensus 264 ~~~~~~-~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 264 FTIQDS-GWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EECSSS-SCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEcCCC-CcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 222222 3458999999999654 4 567889998753
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.25 E-value=0.028 Score=62.83 Aligned_cols=79 Identities=22% Similarity=0.224 Sum_probs=47.4
Q ss_pred CCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccccCCC
Q 047036 384 DNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLG 463 (634)
Q Consensus 384 D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~ 463 (634)
+++|..||+++++. +-....+ .+ .......+.+|.|++|+.||.||.||..+++ .+-.+.. .
T Consensus 465 ~G~l~A~D~~tG~~-~W~~~~~-~~--------------~~~g~~~tagglvf~g~~dg~l~A~D~~tG~-~lW~~~~-~ 526 (582)
T 1flg_A 465 VGSLRAMDPVSGKV-VWEHKEH-LP--------------LWAGVLATAGNLVFTGTGDGYFKAFDAKSGK-ELWKFQT-G 526 (582)
T ss_dssp SEEEEEECTTTCCE-EEEEEES-SC--------------CCSCCEEETTTEEEEECTTSEEEEEETTTCC-EEEEEEC-S
T ss_pred cceEEEEECCCCCE-EEEecCC-CC--------------CcccceEeCCCEEEEECCCCcEEEEECCCCC-EEEEecC-C
Confidence 67899999988653 3222100 00 0111123467889999999999999998885 4433331 1
Q ss_pred CCeEE--EEECCCCCEEEE
Q 047036 464 SPITH--VDVTYDGKWILG 480 (634)
Q Consensus 464 d~Its--VdfSpDGk~LlS 480 (634)
..|.+ +.+..||+..++
T Consensus 527 ~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 527 SGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp SCCCSCCEEEEETTEEEEE
T ss_pred CCcccCceEEEECCEEEEE
Confidence 22222 566789985554
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.23 E-value=0.065 Score=59.63 Aligned_cols=158 Identities=16% Similarity=0.077 Sum_probs=88.3
Q ss_pred CcEEEEeCCCCcEEEEEecc--CC----Cc-ceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecc-c
Q 047036 333 PGVQQLDIETGKIVTEWKFE--KD----GT-DITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMV-K 404 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH--~~----~V-~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~-g 404 (634)
.+|+.+|+.||+++-+++.. .. .+ ...+....+++|. -..++.++.++.|+++|.++++. +.... +
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~-----~~~v~~~~~~G~l~~lD~~tG~~-~w~~~~~ 345 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKM-----TPLLSHIDRNGILYTLNRENGNL-IVAEKVD 345 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEE-----EEEEEEECTTSEEEEEETTTCCE-EEEEESS
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcE-----EEEEEEeCCCcEEEEEECCCCCE-Eeeeccc
Confidence 36999999999999887642 11 11 0012233344210 02577899999999999998753 33221 1
Q ss_pred CCCCccccccccc-----------c---------------ccCcceEEEEECCCC-eEEEEE------------------
Q 047036 405 GDSPVLHWTQGHQ-----------F---------------SRGTNFQCFASTGDG-SIVVGS------------------ 439 (634)
Q Consensus 405 h~s~V~~~~~g~~-----------y---------------~~~~~fssva~s~dG-~IASGS------------------ 439 (634)
+. + .|..+-+ + .-..++..++++|++ .|++++
T Consensus 346 ~~--~-~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~ 422 (571)
T 2ad6_A 346 PA--V-NVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQ 422 (571)
T ss_dssp TT--C-CSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTS
T ss_pred CC--c-cccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCC
Confidence 10 0 0100000 0 001112345666654 555543
Q ss_pred -------------------CCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCC
Q 047036 440 -------------------LDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGK 499 (634)
Q Consensus 440 -------------------~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~ 499 (634)
.+|.|..||+.+++ .+-.++ +..++.+..+...|..|.. +.|++|+.||+. +|+
T Consensus 423 ~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~-~~W~~~-~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~----tG~ 496 (571)
T 2ad6_A 423 FFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGK-AKWTKW-EKFAAWGGTLYTKGGLVWYATLDGYLKALDNK----DGK 496 (571)
T ss_dssp CCCCEEEEEEECTTSTTSCCCEEEEEECTTTCC-EEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETT----TCC
T ss_pred ccccccceeccCccccCCCCCCeEEEEECCCCC-EEEEec-CCCCccceeEEECCCEEEEEcCCCeEEEEECC----CCC
Confidence 35889999998874 444443 2234444443433444544 889999999986 688
Q ss_pred eeeeec
Q 047036 500 TKTGFS 505 (634)
Q Consensus 500 ~~~gF~ 505 (634)
.+-.|.
T Consensus 497 ~lw~~~ 502 (571)
T 2ad6_A 497 ELWNFK 502 (571)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 776554
No 257
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.15 E-value=0.073 Score=60.26 Aligned_cols=160 Identities=13% Similarity=0.198 Sum_probs=92.1
Q ss_pred cEEEEeCCCCcEEEEEec--cCCC-----cceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCC
Q 047036 334 GVQQLDIETGKIVTEWKF--EKDG-----TDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGD 406 (634)
Q Consensus 334 TIrlWDleTGK~V~~lkg--H~~~-----V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~ 406 (634)
+|+.+|+.||+++-+++. |... -+..+..+..+++. ...++.++.++.|+++|.++++. +....-..
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~-----~~~v~~~~~~G~l~~lD~~tG~~-l~~~~~~~ 344 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP-----RKVLMQAPKNGFFYVLDRTNGKL-ISAEKFGK 344 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE-----EEEEEECCTTSEEEEEETTTCCE-EEEEESSC
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE-----EEEEEEECCCCEEEEEECCCCCE-eccccccc
Confidence 599999999999988875 3210 01112233344221 12689999999999999998753 32211000
Q ss_pred ------------CCccccccccccc-----------cCcceEEEEECCCC-eEEEE------------------------
Q 047036 407 ------------SPVLHWTQGHQFS-----------RGTNFQCFASTGDG-SIVVG------------------------ 438 (634)
Q Consensus 407 ------------s~V~~~~~g~~y~-----------~~~~fssva~s~dG-~IASG------------------------ 438 (634)
.++. .....|. -..++..++++|+. .+++.
T Consensus 345 ~~w~~~~d~~~g~p~~--~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g 422 (668)
T 1kv9_A 345 VTWAEKVDLATGRPVE--APGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTA 422 (668)
T ss_dssp CCSEEEECTTTCCEEE--CTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCS
T ss_pred cccccccccccCCccc--cccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccC
Confidence 0000 0000000 01112235566653 33321
Q ss_pred ------------ECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeec
Q 047036 439 ------------SLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 439 ------------S~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
+.+|.|+.||+.+++ .+-.++ +..++.+..++..|..|.. +.|++|+.||.. +|+.+-.|.
T Consensus 423 ~~~~~~~~~p~~~~~g~l~A~D~~tG~-~~W~~~-~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~----tG~~l~~~~ 496 (668)
T 1kv9_A 423 AGFADATDVPAAVVSGALLAWDPVKQK-AAWKVP-YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSAD----KGEALWQFE 496 (668)
T ss_dssp SCGGGCCCCCGGGCEEEEEEEETTTTE-EEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETT----TCCEEEEEE
T ss_pred ccccccCCCCCCCccceEEEEeCCCCc-EEEEcc-CCCCCcCceeEeCCCEEEEECCcccchhhhhh----cChhheEec
Confidence 245889999998875 444444 2344555555566777776 889999999986 688776665
Q ss_pred CC
Q 047036 506 GR 507 (634)
Q Consensus 506 gh 507 (634)
-.
T Consensus 497 ~~ 498 (668)
T 1kv9_A 497 AQ 498 (668)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.04 E-value=0.69 Score=46.15 Aligned_cols=130 Identities=14% Similarity=0.147 Sum_probs=76.0
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEE-eCCCeEEEEEcCCCC-ceEEecccCCCCcc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLG-LDDNRLCQWDMRDRS-GIVQNMVKGDSPVL 410 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSG-S~D~tIklWD~R~~~-~~Vq~l~gh~s~V~ 410 (634)
+.|+.+|..+|++.....+-.. . .-++|+|+ +..|+.+ +..++|.++|+.... .....+.
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~-p--~gia~~~d--------g~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~------- 226 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHV-P--GGAEVSAD--------SSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV------- 226 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESC-C--CEEEECTT--------SSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-------
T ss_pred ceEEEEeCCCCEEEEeccCCcc-C--cceEECCC--------CCEEEEEeCCCCeEEEEECCCCcCCccceEE-------
Confidence 5799999988875433322111 1 12488998 5555544 667999999987421 0011111
Q ss_pred ccccccccccCcceEEEEECCCCeEEEEEC-----------CCcEEEEecccccccccccc---CC-CCCeEEEEECCCC
Q 047036 411 HWTQGHQFSRGTNFQCFASTGDGSIVVGSL-----------DGKIRLYSKTSMRQAKTAFP---GL-GSPITHVDVTYDG 475 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~dG~IASGS~-----------DGtIRLWD~~t~r~akt~L~---GH-~d~ItsVdfSpDG 475 (634)
+. .. -..+++.++|.|.++.. .+.|..+|..+ + ....+. |. -..++++++ .+|
T Consensus 227 ------~~-~g--P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G-~-~~~~~~~~~g~~~~~~~~~~~-~~g 294 (322)
T 2fp8_A 227 ------KI-PN--PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFG-N-ILEVIPLPPPFAGEHFEQIQE-HDG 294 (322)
T ss_dssp ------EC-SS--EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTS-C-EEEEEECCTTTTTSCCCEEEE-ETT
T ss_pred ------eC-CC--CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCC-C-EEEEEECCCCCccccceEEEE-eCC
Confidence 00 01 24578888986555443 36788899754 2 333332 21 245777877 467
Q ss_pred CEEEE-EcCCcEEEEEcc
Q 047036 476 KWILG-TTDTYLILICTL 492 (634)
Q Consensus 476 k~LlS-S~D~tIrLWD~~ 492 (634)
+..++ ...+.|..+++.
T Consensus 295 ~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 295 LLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEEECSSCSEEEEEEC-
T ss_pred EEEEeecCCCceEEEecc
Confidence 66666 567888888854
No 259
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.00 E-value=0.014 Score=66.97 Aligned_cols=107 Identities=8% Similarity=-0.048 Sum_probs=66.8
Q ss_pred eEEEEe-cCCCCCCCCCCCEEEEEeC-----CCeEEEEEcCCC-CceEEecccCCCCccccccccccccCcceEEEEECC
Q 047036 359 TMRDIT-NDTKSSQLDPSESTFLGLD-----DNRLCQWDMRDR-SGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG 431 (634)
Q Consensus 359 ~vvsfs-Pd~K~~q~~~g~~laSGS~-----D~tIklWD~R~~-~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~ 431 (634)
...+|| || |+.||-+.+ ..+|+++|+.++ ..+...+. ..+..++++|
T Consensus 177 ~~~~~S~PD--------G~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~------------------~~~~~~~Wsp 230 (751)
T 2xe4_A 177 MEVKPAPPE--------HDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS------------------GTNGEIVWGP 230 (751)
T ss_dssp EEEEECTTT--------TCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE------------------EECSCCEECS
T ss_pred eeeEecCCC--------CCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc------------------CceeeEEEec
Confidence 345899 99 566664433 246999999876 42100010 0123567899
Q ss_pred CC-eEEEEECC-----CcEEEEecccccccc-ccc-c-CCCCCeEEEEECCCCCEEEE-Ec---CCcEEEEEcc
Q 047036 432 DG-SIVVGSLD-----GKIRLYSKTSMRQAK-TAF-P-GLGSPITHVDVTYDGKWILG-TT---DTYLILICTL 492 (634)
Q Consensus 432 dG-~IASGS~D-----GtIRLWD~~t~r~ak-t~L-~-GH~d~ItsVdfSpDGk~LlS-S~---D~tIrLWD~~ 492 (634)
|| .|+..+.| ..|.++++.+.. .. ..+ . .......++.+||||++|+. +. ...|.++|+.
T Consensus 231 Dg~~l~y~~~d~~~~~~~v~~~~lgt~~-~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 231 DHTSLFYVTKDETLRENKVWRHVMGKLQ-SEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp STTEEEEEEECTTCCEEEEEEEETTSCG-GGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred CCCEEEEEEECCCCCCCEEEEEECCCCc-hhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 98 67777765 368888886642 22 122 2 23346788999999999986 42 3457777864
No 260
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.84 E-value=0.16 Score=52.12 Aligned_cols=126 Identities=7% Similarity=-0.029 Sum_probs=80.7
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
+.+.++|++|++++.++.....+. .+++| +..|+.+..+++|.++|+.+.+ ++.++.-..
T Consensus 116 ~~v~V~D~~Tl~~~~ti~~~~eGw-----GLt~D--------g~~L~vSdGs~~l~~iDp~T~~-v~~~I~V~~------ 175 (268)
T 3nok_A 116 GLLFTWSGMPPQRERTTRYSGEGW-----GLCYW--------NGKLVRSDGGTMLTFHEPDGFA-LVGAVQVKL------ 175 (268)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCC-----CEEEE--------TTEEEEECSSSEEEEECTTTCC-EEEEEECEE------
T ss_pred CEEEEEECCcCcEEEEEeCCCcee-----EEecC--------CCEEEEECCCCEEEEEcCCCCe-EEEEEEeCC------
Confidence 689999999999999998654432 44566 4567766679999999999864 344442100
Q ss_pred ccccccccCcceEEEEECCCCeEEEEE-CCCcEEEEecccccccccccc-------------CCCCCeEEEEECCCCCEE
Q 047036 413 TQGHQFSRGTNFQCFASTGDGSIVVGS-LDGKIRLYSKTSMRQAKTAFP-------------GLGSPITHVDVTYDGKWI 478 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~dG~IASGS-~DGtIRLWD~~t~r~akt~L~-------------GH~d~ItsVdfSpDGk~L 478 (634)
.+.... ...-+.+. +|+|.++. .+++|.+-|..+++ ....+. .-.+--++|+++|+++.|
T Consensus 176 -~g~~v~---~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~-V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rl 249 (268)
T 3nok_A 176 -RGQPVE---LINELECA-NGVIYANIWHSSDVLEIDPATGT-VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRI 249 (268)
T ss_dssp -TTEECC---CEEEEEEE-TTEEEEEETTCSEEEEECTTTCB-EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCE
T ss_pred -CCcccc---cccccEEe-CCEEEEEECCCCeEEEEeCCCCc-EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEE
Confidence 011100 11222333 67776666 58899999998864 322221 123567899999998887
Q ss_pred EEEcCC
Q 047036 479 LGTTDT 484 (634)
Q Consensus 479 lSS~D~ 484 (634)
..|-..
T Consensus 250 fVTGK~ 255 (268)
T 3nok_A 250 FMTGKL 255 (268)
T ss_dssp EEEETT
T ss_pred EEeCCC
Confidence 764443
No 261
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.83 E-value=0.86 Score=48.79 Aligned_cols=166 Identities=11% Similarity=0.083 Sum_probs=93.1
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEecc-CCCcceeEEEEecCCCCCCCCCCC-EEEEEeC
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFE-KDGTDITMRDITNDTKSSQLDPSE-STFLGLD 383 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH-~~~V~I~vvsfsPd~K~~q~~~g~-~laSGS~ 383 (634)
.|.++.+...+++++++...+ +.|+.+|..+|+++..+-.. ..... .-++|+|+ +. +.++-..
T Consensus 229 ~P~giavd~~~G~lyv~d~~~------~~V~~~d~~~g~~~~~~~~~~~~~~~-~~ia~dpd--------G~~LYvad~~ 293 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHH------AMISSYDPATGTLTEEEVMMDTKGSN-FHIVWHPT--------GDWAYIIYNG 293 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTC------SEEEEECTTTCCEEEEEEECSCCSSC-EEEEECTT--------SSEEEEEETT
T ss_pred CCCEEEEeCCCCeEEEEECCC------CEEEEEECCCCeEEEEEeccCCCCCc-ccEEEeCC--------CCEEEEEeCC
Confidence 355544433356666666543 58999999999885544322 22111 12489998 55 5555566
Q ss_pred CCeEEEEEcCCC-Cce--EEecccC-CCCccccccccc-cccCcceEEEEE---------CCCCeEEEE-ECCCcEEEEe
Q 047036 384 DNRLCQWDMRDR-SGI--VQNMVKG-DSPVLHWTQGHQ-FSRGTNFQCFAS---------TGDGSIVVG-SLDGKIRLYS 448 (634)
Q Consensus 384 D~tIklWD~R~~-~~~--Vq~l~gh-~s~V~~~~~g~~-y~~~~~fssva~---------s~dG~IASG-S~DGtIRLWD 448 (634)
.++|+++|+... +.+ +..+.+. ... .+..+.- ...-..-..+++ .++|.|.++ +..+.||.++
T Consensus 294 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~--g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 294 KHCIYRVDYNRETGKLAVPYIVCGQHSSP--GWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTEEEEEEBCTTTCCBCCCEEEEECTTCC--CCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCCCCCcccCcEEEEEecCCCC--ccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 799999886532 110 1223221 000 0001100 000011245777 777866555 4567899999
Q ss_pred ccccccccccccCC------------------CCCeEEEEEC-CCCCEEEE-EcCCcEEEEEc
Q 047036 449 KTSMRQAKTAFPGL------------------GSPITHVDVT-YDGKWILG-TTDTYLILICT 491 (634)
Q Consensus 449 ~~t~r~akt~L~GH------------------~d~ItsVdfS-pDGk~LlS-S~D~tIrLWD~ 491 (634)
..+ . . .++-|. -..-.+|+++ ++|..+++ +..+.|+.+++
T Consensus 372 ~~G-~-v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 372 PEG-R-V-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp TTS-E-E-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCC-C-E-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 643 2 2 222111 1236899999 88888888 77888988875
No 262
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.64 E-value=1.9 Score=48.95 Aligned_cols=159 Identities=16% Similarity=0.152 Sum_probs=99.0
Q ss_pred ceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCC--Cc-ceeEEEEecCCCCCCCCCCCEEEEEeCC
Q 047036 308 KKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKD--GT-DITMRDITNDTKSSQLDPSESTFLGLDD 384 (634)
Q Consensus 308 ~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~--~V-~I~vvsfsPd~K~~q~~~g~~laSGS~D 384 (634)
...++.+.++++.+.... -|.+||..+++...-...+.. .. .-.|.++..|. ...|..|+.+
T Consensus 265 i~~i~~d~~g~lWigt~~--------Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-------~g~lWigt~~ 329 (795)
T 4a2l_A 265 IRSLAMDSQNRLWIGTFN--------DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDS-------QGGMWLGTYF 329 (795)
T ss_dssp EEEEEECTTSCEEEEESS--------CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECT-------TSCEEEEESS
T ss_pred EEEEEEcCCCCEEEEeCC--------hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeC-------CcCEEEEECC
Confidence 445666667776665532 499999998875443221110 00 00233454442 2468889999
Q ss_pred CeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEecccccccccccc----
Q 047036 385 NRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFP---- 460 (634)
Q Consensus 385 ~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~---- 460 (634)
+-|.++|+.... .+.+. +.. ...-.....+.+++..++|.|-+|+.++-|.+||..+.+ ......
T Consensus 330 ~Gl~~~~~~~~~--~~~~~-~~~-------~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~-~~~~~~~~~~ 398 (795)
T 4a2l_A 330 GGLNYYHPIRNR--FKNIR-NIP-------YKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQR-FTSYTLQEDE 398 (795)
T ss_dssp SCEEEECGGGGS--SEEEC-CCT-------TSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCC-EEEECCC---
T ss_pred CCeEEeCCCccc--ceEEc-CCC-------CCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCc-EEEEecCCCC
Confidence 999999987543 12221 000 000012345889999999999999999889999977542 222111
Q ss_pred ---C-CCCCeEEEEECCCCC-EEEEEcCCcEEEEEcc
Q 047036 461 ---G-LGSPITHVDVTYDGK-WILGTTDTYLILICTL 492 (634)
Q Consensus 461 ---G-H~d~ItsVdfSpDGk-~LlSS~D~tIrLWD~~ 492 (634)
+ ....|.+|...++|+ ..+++.++-|.++|..
T Consensus 399 ~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~ 435 (795)
T 4a2l_A 399 SARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN 435 (795)
T ss_dssp ---CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred cccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence 1 246799999999999 5566777788888854
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.41 E-value=4.8 Score=45.55 Aligned_cols=156 Identities=12% Similarity=0.165 Sum_probs=96.5
Q ss_pred cceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEecc-----CCCc-ceeEEEEecCCCCCCCCCCCEEEE
Q 047036 307 PKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFE-----KDGT-DITMRDITNDTKSSQLDPSESTFL 380 (634)
Q Consensus 307 P~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH-----~~~V-~I~vvsfsPd~K~~q~~~g~~laS 380 (634)
....++.+.++++-+..-. +-|.+++..+++... +... .... .-.|.++..|.+ ..|..
T Consensus 314 ~v~~i~~D~~g~lWigt~~-------~Gl~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~-------g~lWi 378 (781)
T 3v9f_A 314 SARYIFQDSFNNIWIGTWG-------GGINFISNAPPTFHT-WSYSPTQMNESSLSNKVVSSVCDDGQ-------GKLWI 378 (781)
T ss_dssp CEEEEEECSSCCEEEEEBS-------SCEEEECSSCCSCEE-EC----CCCSSCCSSSCEEEEEECTT-------SCEEE
T ss_pred eEEEEEEeCCCCEEEEecC-------CeEEEeCCCCCccee-eccCccccccCCCCCcceEEEEEcCC-------CCEEE
Confidence 3456666777776665533 359999988766433 3210 0000 002345555521 46888
Q ss_pred EeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccc-
Q 047036 381 GLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAF- 459 (634)
Q Consensus 381 GS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L- 459 (634)
|+.++-|.++|+.++. ++.+. ... -.....+.+++..++|.|-+|+.++-|..||..+++ .+...
T Consensus 379 gt~~~Gl~~~~~~~~~--~~~~~--~~~---------~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~-~~~~~~ 444 (781)
T 3v9f_A 379 GTDGGGINVFENGKRV--AIYNK--ENR---------ELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKK-FQIIEL 444 (781)
T ss_dssp EEBSSCEEEEETTEEE--EECC----------------CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCE-EEECCS
T ss_pred EeCCCcEEEEECCCCe--EEEcc--CCC---------CCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCc-EEEecc
Confidence 9988899999987531 22221 000 012345788888888999889988889999986643 22211
Q ss_pred -cCCCCCeEEEEECCCCCEEEEEcCCcEEEEEcc
Q 047036 460 -PGLGSPITHVDVTYDGKWILGTTDTYLILICTL 492 (634)
Q Consensus 460 -~GH~d~ItsVdfSpDGk~LlSS~D~tIrLWD~~ 492 (634)
.-....|.+|...++|+..+++. +-|.++|..
T Consensus 445 ~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~ 477 (781)
T 3v9f_A 445 EKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLA 477 (781)
T ss_dssp TTTCCCCEEEEEECTTSEEEEEET-TEEEEEESS
T ss_pred CCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCC
Confidence 11346899999999999777776 668888853
No 264
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.32 E-value=0.15 Score=57.35 Aligned_cols=78 Identities=14% Similarity=0.179 Sum_probs=45.7
Q ss_pred CCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccccc--c
Q 047036 383 DDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAF--P 460 (634)
Q Consensus 383 ~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L--~ 460 (634)
..+.|..||+++++. +-... +..+ .+.....+.+|.|++|+.||.||.||..+++ .+-.+ +
T Consensus 451 ~~G~l~A~D~~tG~~-~W~~~-~~~~--------------~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~-~lW~~~l~ 513 (599)
T 1w6s_A 451 GLGQIKAYNAITGDY-KWEKM-ERFA--------------VWGGTMATAGDLVFYGTLDGYLKARDSDTGD-LLWKFKIP 513 (599)
T ss_dssp CCEEEEEECTTTCCE-EEEEE-ESSC--------------CCSBCEEETTTEEEEECTTSEEEEEETTTCC-EEEEEECS
T ss_pred CcCeEEEEECCCCCE-EeEec-CCCC--------------ccCcceEecCCEEEEECCCCeEEEEECCCCC-EEEEeeCC
Confidence 347888889887642 22221 0000 0111123467788889999999999999885 44333 2
Q ss_pred --CCCCCeEEEEECCCCCEEEE
Q 047036 461 --GLGSPITHVDVTYDGKWILG 480 (634)
Q Consensus 461 --GH~d~ItsVdfSpDGk~LlS 480 (634)
..+.| +.+..||+..++
T Consensus 514 ~g~~~~P---~~y~~~G~qyv~ 532 (599)
T 1w6s_A 514 SGAIGYP---MTYTHKGTQYVA 532 (599)
T ss_dssp SCCCSCC---EEEEETTEEEEE
T ss_pred CCcEecc---EEEEeCCEEEEE
Confidence 22333 445678875544
No 265
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.28 E-value=1.2 Score=44.33 Aligned_cols=143 Identities=10% Similarity=0.097 Sum_probs=78.7
Q ss_pred CCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCC--eEEEEEc
Q 047036 315 GETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDN--RLCQWDM 392 (634)
Q Consensus 315 ~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~--tIklWD~ 392 (634)
.++++++++..+ +.|+.||.. |+....+.... . ..-++++|+ ++++++....+ .|..+|+
T Consensus 41 ~~g~lyv~d~~~------~~I~~~d~~-g~~~~~~~~~~-~--p~gia~~~d--------G~l~vad~~~~~~~v~~~d~ 102 (306)
T 2p4o_A 41 PDGTIFVTNHEV------GEIVSITPD-GNQQIHATVEG-K--VSGLAFTSN--------GDLVATGWNADSIPVVSLVK 102 (306)
T ss_dssp TTSCEEEEETTT------TEEEEECTT-CCEEEEEECSS-E--EEEEEECTT--------SCEEEEEECTTSCEEEEEEC
T ss_pred CCCCEEEEeCCC------CeEEEECCC-CceEEEEeCCC-C--ceeEEEcCC--------CcEEEEeccCCcceEEEEcC
Confidence 345556665433 689999987 56655554432 2 134578887 56555544332 4777887
Q ss_pred CCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEE-ECCCcEEEEeccccc-ccc---c-----cccCC
Q 047036 393 RDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVG-SLDGKIRLYSKTSMR-QAK---T-----AFPGL 462 (634)
Q Consensus 393 R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASG-S~DGtIRLWD~~t~r-~ak---t-----~L~GH 462 (634)
.++. +..+..... ......++..+++.++++ +..|.|..+|..+++ ... . ...+.
T Consensus 103 ~~g~--~~~~~~~~~-------------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~ 167 (306)
T 2p4o_A 103 SDGT--VETLLTLPD-------------AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESV 167 (306)
T ss_dssp TTSC--EEEEEECTT-------------CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCC
T ss_pred CCCe--EEEEEeCCC-------------ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCC
Confidence 6653 233321100 001133445666654444 468888888875421 010 0 11111
Q ss_pred CCCeEEEEECCCCCEEE-E-EcCCcEEEEEcc
Q 047036 463 GSPITHVDVTYDGKWIL-G-TTDTYLILICTL 492 (634)
Q Consensus 463 ~d~ItsVdfSpDGk~Ll-S-S~D~tIrLWD~~ 492 (634)
-....+| +|||++|. + +..+.|..+|+.
T Consensus 168 ~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~ 197 (306)
T 2p4o_A 168 FPAANGL--KRFGNFLYVSNTEKMLLLRIPVD 197 (306)
T ss_dssp SCSEEEE--EEETTEEEEEETTTTEEEEEEBC
T ss_pred CCcCCCc--CcCCCEEEEEeCCCCEEEEEEeC
Confidence 1235666 99998765 4 667899999964
No 266
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.12 E-value=0.41 Score=51.31 Aligned_cols=152 Identities=7% Similarity=0.029 Sum_probs=83.5
Q ss_pred cCcceeeEEe--CCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe
Q 047036 305 STPKKALLMR--GETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL 382 (634)
Q Consensus 305 fsP~~~mL~~--~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS 382 (634)
..|.++.+.. .+++++++... +.|+.+|+.+|++...+. ..... .-++|+|+ +.+.++..
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~-------~~I~~id~~~g~v~~~~~-~~~~P--~giavd~d--------G~lyVad~ 200 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQR-------DAFRHVDFVNQYVDIKTT-NIGQC--ADVNFTLN--------GDMVVVDD 200 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBT-------SCEEEEETTTTEEEEECC-CCSCE--EEEEECTT--------CCEEEEEC
T ss_pred CCCceEEEccccCCCEEEEEeCC-------CCEEEEECCCCEEEEeec-CCCCc--cEEEECCC--------CCEEEEcC
Confidence 4577665443 24666666543 479999999887665443 22222 34588887 56444433
Q ss_pred CC---C-eEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEEE-CCCcEEEEecccccccc
Q 047036 383 DD---N-RLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVGS-LDGKIRLYSKTSMRQAK 456 (634)
Q Consensus 383 ~D---~-tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASGS-~DGtIRLWD~~t~r~ak 456 (634)
.. . .+...+...+......+. .-.....+++.+ +|.|.++. ..+.|+.+|..++. ..
T Consensus 201 ~~~~~~~gv~~~~~~~~~~~~~~~~----------------~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~-~~ 263 (433)
T 4hw6_A 201 QSSDTNTGIYLFTRASGFTERLSLC----------------NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGT-LT 263 (433)
T ss_dssp CSCTTSEEEEEECGGGTTCCEEEEE----------------ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCC-EE
T ss_pred CCCcccceEEEEECCCCeecccccc----------------ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCe-EE
Confidence 21 1 233333221110000110 001123457788 78777665 56789999987542 31
Q ss_pred cccc--CCCCCeEEEEECCCCCEEE-E-EcCCcEEEEEc
Q 047036 457 TAFP--GLGSPITHVDVTYDGKWIL-G-TTDTYLILICT 491 (634)
Q Consensus 457 t~L~--GH~d~ItsVdfSpDGk~Ll-S-S~D~tIrLWD~ 491 (634)
+.+. +....-.+|+|+|+|++|. + +..++|+.++.
T Consensus 264 ~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 264 EEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp EEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred EEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 2221 1122235799999999554 4 66788999885
No 267
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.97 E-value=0.47 Score=53.39 Aligned_cols=60 Identities=12% Similarity=0.058 Sum_probs=38.9
Q ss_pred CcEEEEeCCCCcEEEEEeccCCC------c-ceeEEEEe-cCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDG------T-DITMRDIT-NDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSG 397 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~------V-~I~vvsfs-Pd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~ 397 (634)
.+|..+|+.||+++-.++..... + ...+..+. .++|. -..++.++.++.|++.|.++++.
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~-----~~~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKA-----RKLLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCE-----EEEEEEECTTSEEEEEETTTCCE
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcE-----EEEEEEECCCcEEEEEECCCCCE
Confidence 48999999999999887653210 0 00122332 33210 03677889999999999998753
No 268
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.86 E-value=0.23 Score=56.19 Aligned_cols=156 Identities=15% Similarity=0.229 Sum_probs=91.0
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeC------CCeEEEEEcCCCCceEEecccC-
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLD------DNRLCQWDMRDRSGIVQNMVKG- 405 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~------D~tIklWD~R~~~~~Vq~l~gh- 405 (634)
+.|+.+|.+||+++-++..........+ ..+|- +. +..++.|+. ++.|+.+|+++++. +-.+...
T Consensus 127 g~l~alD~~tG~~~W~~~~~~~~~~~~~-~~~P~-----v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~-~W~~~~~~ 198 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTDPAKPYSI-TGAPR-----VV-KGKVIIGNGGAEYGVRGFVSAYDADTGKL-AWRFYTVP 198 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSCTTSSCBC-CSCCE-----EE-TTEEEECCBCTTTCCBCEEEEEETTTCCE-EEEEESSC
T ss_pred CEEEEEECCCCCEeeeeccCCCCCccee-cCCCE-----EE-CCEEEEeCCCCCcCCCCEEEEEECCCCcE-EEEecccC
Confidence 6899999999999988876321000000 11121 00 246666654 58999999999764 3333210
Q ss_pred CCCcc------------ccccccccc---cCcceEEEEECCC-CeEEEEECCCc-------------------EEEEecc
Q 047036 406 DSPVL------------HWTQGHQFS---RGTNFQCFASTGD-GSIVVGSLDGK-------------------IRLYSKT 450 (634)
Q Consensus 406 ~s~V~------------~~~~g~~y~---~~~~fssva~s~d-G~IASGS~DGt-------------------IRLWD~~ 450 (634)
..+.. .|.....|. ....+.++++++. +.|++++.++. |..+|..
T Consensus 199 ~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~ 278 (668)
T 1kv9_A 199 GDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPD 278 (668)
T ss_dssp CCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTT
T ss_pred CCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCC
Confidence 00100 010000000 1122344667765 58888887764 9999998
Q ss_pred cccccccccc--CCC-------CCeEEEEECCCCC---EEEE-EcCCcEEEEEcccccCCCCee
Q 047036 451 SMRQAKTAFP--GLG-------SPITHVDVTYDGK---WILG-TTDTYLILICTLFSDKDGKTK 501 (634)
Q Consensus 451 t~r~akt~L~--GH~-------d~ItsVdfSpDGk---~LlS-S~D~tIrLWD~~~~~~~G~~~ 501 (634)
+++ .+-.++ .|. .++...++..||+ .|+. +.+++|.++|.. +|+.+
T Consensus 279 tG~-~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~----tG~~l 337 (668)
T 1kv9_A 279 TGK-LAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRT----NGKLI 337 (668)
T ss_dssp TCC-EEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETT----TCCEE
T ss_pred CCc-eeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECC----CCCEe
Confidence 875 443332 232 4556667777997 5666 889999999975 67766
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.68 E-value=4.2 Score=41.75 Aligned_cols=145 Identities=6% Similarity=-0.052 Sum_probs=83.1
Q ss_pred CCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCC
Q 047036 315 GETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRD 394 (634)
Q Consensus 315 ~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~ 394 (634)
.++.++.+.... +.|+.+++..+............. .-+++.+.+ +.+.++-...++|.+.++..
T Consensus 83 ~~~~ly~~D~~~------~~I~r~~~~g~~~~~~~~~~~~~p--~glavd~~~-------g~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 83 RRELVFWSDVTL------DRILRANLNGSNVEEVVSTGLESP--GGLAVDWVH-------DKLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp TTTEEEEEETTT------TEEEEEETTSCSCEEEECSSCSCC--CEEEEETTT-------TEEEEEETTTTEEEEEETTS
T ss_pred cccEEEEEeccC------CceEEEecCCCCceEEEeCCCCCc--cEEEEecCC-------CeEEEEcCCCCeEEEEcCCC
Confidence 344455555443 689999998665433332221211 123777651 34556667788999999875
Q ss_pred CCceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEE-ECC-CcEEEEeccccccccccccCCCCCeEEEEE
Q 047036 395 RSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVG-SLD-GKIRLYSKTSMRQAKTAFPGLGSPITHVDV 471 (634)
Q Consensus 395 ~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASG-S~D-GtIRLWD~~t~r~akt~L~GH~d~ItsVdf 471 (634)
... ..+.. . .-..-..+++.| +|+|... ... +.|..++..+. .....+..--..-++|+|
T Consensus 148 ~~~--~~l~~--~------------~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGla~ 210 (349)
T 3v64_C 148 AHR--KVLLW--Q------------SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTI 210 (349)
T ss_dssp CSC--EEEEC--T------------TCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSSCSCEEEEEE
T ss_pred Cce--EEEEe--C------------CCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCcceEEE
Confidence 432 22210 0 001235678887 5665544 344 78888887652 222222222345689999
Q ss_pred CCCCCEEE-E-EcCCcEEEEEc
Q 047036 472 TYDGKWIL-G-TTDTYLILICT 491 (634)
Q Consensus 472 SpDGk~Ll-S-S~D~tIrLWD~ 491 (634)
+|++..|. + +..+.|..+|.
T Consensus 211 d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 211 DYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEET
T ss_pred eCCCCEEEEEECCCCEEEEEeC
Confidence 99777664 5 66778888885
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.62 E-value=2.2 Score=44.52 Aligned_cols=153 Identities=5% Similarity=-0.057 Sum_probs=85.0
Q ss_pred cceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCe
Q 047036 307 PKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNR 386 (634)
Q Consensus 307 P~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~t 386 (634)
|.++-+...++.++++.... +.|+.+++..+.....+....... .-+++.+.. +.+.++-...++
T Consensus 118 ~~gl~~d~~~~~ly~~D~~~------~~I~r~~~~g~~~~~~~~~~~~~p--~glavd~~~-------g~lY~~d~~~~~ 182 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDVTL------DRILRANLNGSNVEEVVSTGLESP--GGLAVDWVH-------DKLYWTDSGTSR 182 (386)
T ss_dssp EEEEEEETTTTEEEEEETTT------TEEEEEETTSCCEEEEECSSCSCC--CCEEEETTT-------TEEEEEETTTTE
T ss_pred cEEEEEecCCCeEEEEeCCC------CcEEEEecCCCCcEEEEeCCCCCc--cEEEEEeCC-------CeEEEEcCCCCe
Confidence 44433332444455555443 689999998665433332221111 123677651 345566667788
Q ss_pred EEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEEE-CC-CcEEEEeccccccccccccCCC
Q 047036 387 LCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVGS-LD-GKIRLYSKTSMRQAKTAFPGLG 463 (634)
Q Consensus 387 IklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASGS-~D-GtIRLWD~~t~r~akt~L~GH~ 463 (634)
|.+.++..... ..+... .-..-..+++.| +|+|.... .. +.|..++..+. .....+...-
T Consensus 183 I~~~~~dg~~~--~~l~~~--------------~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~ 245 (386)
T 3v65_B 183 IEVANLDGAHR--KVLLWQ--------------SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHL 245 (386)
T ss_dssp EEECBTTSCSC--EEEECS--------------SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSC
T ss_pred EEEEeCCCCce--EEeecC--------------CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCC
Confidence 99888864322 222100 001235677876 45655543 33 68888887652 2222222223
Q ss_pred CCeEEEEECCCCCEEE-E-EcCCcEEEEEc
Q 047036 464 SPITHVDVTYDGKWIL-G-TTDTYLILICT 491 (634)
Q Consensus 464 d~ItsVdfSpDGk~Ll-S-S~D~tIrLWD~ 491 (634)
..-++|+|+|++..|. + +..+.|..+|.
T Consensus 246 ~~PnGlavd~~~~~lY~aD~~~~~I~~~d~ 275 (386)
T 3v65_B 246 FWPNGLTIDYAGRRMYWVDAKHHVIERANL 275 (386)
T ss_dssp SCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred CCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 3568999998777664 5 66778888884
No 271
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.44 E-value=3.6 Score=41.72 Aligned_cols=64 Identities=14% Similarity=0.050 Sum_probs=44.4
Q ss_pred ceEEEEECCCCeEEEEECCCcEEEEecccccccc-cccc--CCCCCeEEEEECCCCCEEEEEcCCcE
Q 047036 423 NFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAK-TAFP--GLGSPITHVDVTYDGKWILGTTDTYL 486 (634)
Q Consensus 423 ~fssva~s~dG~IASGS~DGtIRLWD~~t~r~ak-t~L~--GH~d~ItsVdfSpDGk~LlSS~D~tI 486 (634)
.+..++++++|.+..++.+|.|++++...++.-. ...+ .++..+.+|.+.|+++.++++.++.|
T Consensus 206 ~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i 272 (327)
T 2xbg_A 206 RLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL 272 (327)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE
T ss_pred ccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE
Confidence 4677888889988888889999988422222111 1122 13456999999999998888878876
No 272
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.96 E-value=1.1 Score=49.43 Aligned_cols=168 Identities=11% Similarity=0.034 Sum_probs=93.3
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCC-------CCcE-----------EEE-EeccCCCcceeEEEEecC
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIE-------TGKI-----------VTE-WKFEKDGTDITMRDITND 366 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDle-------TGK~-----------V~~-lkgH~~~V~I~vvsfsPd 366 (634)
.|.++.++..++.++++.-.+ +.|+++|+. +|++ +.. +.......+ .-++|+|+
T Consensus 248 ~p~giavdp~~g~LYvtd~~~------g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p-~~ia~~p~ 320 (496)
T 3kya_A 248 QCNGATIHPINGELYFNSYEK------GQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWE-FQIFIHPT 320 (496)
T ss_dssp CCCCEEECTTTCCEEEEETTT------TEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCC-EEEEECTT
T ss_pred CceEEEEcCCCCeEEEEECCC------CEEEEEecccccccccCceeecccccccccccceeEecCCCCCc-eEEEEcCC
Confidence 355555544456666666553 589999998 7765 233 222222222 23599998
Q ss_pred CCCCCCCCCCE-EEEEeCCCeEEEEEcCCCCceE---EecccCCCCcccccccc--ccccCcceEEEEEC-------CCC
Q 047036 367 TKSSQLDPSES-TFLGLDDNRLCQWDMRDRSGIV---QNMVKGDSPVLHWTQGH--QFSRGTNFQCFAST-------GDG 433 (634)
Q Consensus 367 ~K~~q~~~g~~-laSGS~D~tIklWD~R~~~~~V---q~l~gh~s~V~~~~~g~--~y~~~~~fssva~s-------~dG 433 (634)
+.. .++=+..++|+++|+......+ .++.|.... ..+..|. .-.-..+...++.. .+|
T Consensus 321 --------G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~-~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g 391 (496)
T 3kya_A 321 --------GKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQ-SGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEY 391 (496)
T ss_dssp --------SSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTB-CCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCE
T ss_pred --------CCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCC-CcccCCcccccccCCCeEEEEEccccccccCCC
Confidence 564 5555678999997764322111 233332000 0011111 00112222234444 466
Q ss_pred eEEEE-ECCCcEEEEeccccccccccccCC--------------C----------CCeEEEEECCC-CCEEEE-EcCCcE
Q 047036 434 SIVVG-SLDGKIRLYSKTSMRQAKTAFPGL--------------G----------SPITHVDVTYD-GKWILG-TTDTYL 486 (634)
Q Consensus 434 ~IASG-S~DGtIRLWD~~t~r~akt~L~GH--------------~----------d~ItsVdfSpD-Gk~LlS-S~D~tI 486 (634)
.|.++ +....||.++..+ . .+++-|. . ..-.+|+++++ |...++ +..+.|
T Consensus 392 ~lyVaD~~N~rIr~i~~~G-~--v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rI 468 (496)
T 3kya_A 392 DFYFVDRLNFCVRKVTPEG-I--VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTI 468 (496)
T ss_dssp EEEEEEGGGTEEEEECTTC-B--EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEE
T ss_pred eEEEEECCCCEEEEEeCCC-C--EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEE
Confidence 65554 5678999999543 2 2233221 1 23579999997 888888 888999
Q ss_pred EEEEcc
Q 047036 487 ILICTL 492 (634)
Q Consensus 487 rLWD~~ 492 (634)
|.+++.
T Consensus 469 rki~~~ 474 (496)
T 3kya_A 469 RTISME 474 (496)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 999864
No 273
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=93.95 E-value=2.9 Score=42.42 Aligned_cols=66 Identities=11% Similarity=0.005 Sum_probs=43.3
Q ss_pred ceEEEEECCCCeEEEEECCCcEEEEecccccccccccc---CCCCCeEEEEECCCCCEEEEEcCCcEEEEE
Q 047036 423 NFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFP---GLGSPITHVDVTYDGKWILGTTDTYLILIC 490 (634)
Q Consensus 423 ~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~---GH~d~ItsVdfSpDGk~LlSS~D~tIrLWD 490 (634)
.+.++++.+++.|+.++.+|.| ++....++ .=+.+. ++...+.+|.|.+++++++.+.+++|.-++
T Consensus 251 ~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~-tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 251 GFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQ-TWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp CEEEEEESSSSCEEEEESTTCE-EEESSTTS-SCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred ceEEEEecCCCEEEEEeCCCeE-EEeCCCCc-ccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 4678888888876666678877 34333332 112222 234568899998888877778899876665
No 274
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=93.87 E-value=6.1 Score=39.78 Aligned_cols=153 Identities=5% Similarity=-0.097 Sum_probs=82.8
Q ss_pred cceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCC---CcEEEE-EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe
Q 047036 307 PKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIET---GKIVTE-WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL 382 (634)
Q Consensus 307 P~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleT---GK~V~~-lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS 382 (634)
|.++.+...++.+++++... +.|+.+|+.+ |..+.. +...-..+ .-+++.+.+ +.+.++-.
T Consensus 32 p~g~~~d~~~~~ly~~D~~~------~~I~~~~~~g~~~~~~~~~~~~~~~~~p--~glavd~~~-------~~ly~~d~ 96 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLSQ------RMICSTQLDRAHGVSSYDTVISRDIQAP--DGLAVDWIH-------SNIYWTDS 96 (316)
T ss_dssp EEEEEEETTTTEEEEEETTT------TEEEEEEC--------CEEEECSSCSCC--CEEEEETTT-------TEEEEEET
T ss_pred eEEEEEEeCCCEEEEEECCC------CcEEEEECCCCCCCcccEEEEeCCCCCc--CEEEEeecC-------CeEEEEEC
Confidence 44433322344455555543 6899999885 233233 22211121 233666641 23445556
Q ss_pred CCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEEECC--CcEEEEeccccccccccc
Q 047036 383 DDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVGSLD--GKIRLYSKTSMRQAKTAF 459 (634)
Q Consensus 383 ~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASGS~D--GtIRLWD~~t~r~akt~L 459 (634)
..++|.+.|+.... +..+... .-..-..++..| +|+|..+... +.|...+..+. ..+..+
T Consensus 97 ~~~~I~~~~~~g~~--~~~~~~~--------------~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~ 159 (316)
T 1ijq_A 97 VLGTVSVADTKGVK--RKTLFRE--------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLV 159 (316)
T ss_dssp TTTEEEEEETTSSS--EEEEEEC--------------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEE
T ss_pred CCCEEEEEeCCCCc--eEEEEEC--------------CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEE
Confidence 78899999987432 2222100 001235778886 5666555443 68888887542 122222
Q ss_pred cCCCCCeEEEEECCCCCEEE-E-EcCCcEEEEEc
Q 047036 460 PGLGSPITHVDVTYDGKWIL-G-TTDTYLILICT 491 (634)
Q Consensus 460 ~GH~d~ItsVdfSpDGk~Ll-S-S~D~tIrLWD~ 491 (634)
...-...++|+++|++..|. + +..+.|..+|.
T Consensus 160 ~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~ 193 (316)
T 1ijq_A 160 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 193 (316)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ECCCCCceEEEEeccCCEEEEEECCCCeEEEEec
Confidence 22234578999999887765 4 56778988885
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=93.73 E-value=3.8 Score=41.30 Aligned_cols=157 Identities=13% Similarity=0.112 Sum_probs=89.9
Q ss_pred cEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCC---CceEEecccCCCCcc
Q 047036 334 GVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDR---SGIVQNMVKGDSPVL 410 (634)
Q Consensus 334 TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~---~~~Vq~l~gh~s~V~ 410 (634)
.|+..|+.+++......+-... .-++|.+.. +.+.++-...++|+++|+... ... ..+.. .
T Consensus 11 ~I~~i~~~~~~~~~~~~~~~~p---~g~~~d~~~-------~~ly~~D~~~~~I~~~~~~g~~~~~~~-~~~~~--~--- 74 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIPNLRNV---VALDTEVAS-------NRIYWSDLSQRMICSTQLDRAHGVSSY-DTVIS--R--- 74 (316)
T ss_dssp SEEEEETTSCCCEEEECSCSSE---EEEEEETTT-------TEEEEEETTTTEEEEEEC--------C-EEEEC--S---
T ss_pred eEEEEECCCcceEehhcCCCce---EEEEEEeCC-------CEEEEEECCCCcEEEEECCCCCCCccc-EEEEe--C---
Confidence 5999999988776655443332 234888751 345566677899999998751 111 11110 0
Q ss_pred ccccccccccCcceEEEEECC-CCeEEEE-ECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEE-EEc-C-Cc
Q 047036 411 HWTQGHQFSRGTNFQCFASTG-DGSIVVG-SLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWIL-GTT-D-TY 485 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~-dG~IASG-S~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~Ll-SS~-D-~t 485 (634)
+ . ..-..+|+.+ ++.|+.+ ...+.|.++|..+. ..+..+........+|++.|++.+|. +.. . ..
T Consensus 75 ----~----~-~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~-~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~ 144 (316)
T 1ijq_A 75 ----D----I-QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV-KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK 144 (316)
T ss_dssp ----S----C-SCCCEEEEETTTTEEEEEETTTTEEEEEETTSS-SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE
T ss_pred ----C----C-CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC-ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCe
Confidence 0 0 0124567764 5566544 67789999998753 23344443334669999999777664 433 2 56
Q ss_pred EEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCCC
Q 047036 486 LILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPLD 524 (634)
Q Consensus 486 IrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe~ 524 (634)
|...+. +|.....+... ....|.-|.+.|..
T Consensus 145 I~~~~~-----dG~~~~~~~~~---~~~~P~gla~d~~~ 175 (316)
T 1ijq_A 145 IKKGGL-----NGVDIYSLVTE---NIQWPNGITLDLLS 175 (316)
T ss_dssp EEEEET-----TSCCEEEEECS---SCSCEEEEEEETTT
T ss_pred EEEEcC-----CCCCeEEEEEC---CCCCceEEEEeccC
Confidence 776664 45544434211 12346677777644
No 276
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=93.64 E-value=5.1 Score=42.49 Aligned_cols=144 Identities=12% Similarity=0.158 Sum_probs=86.6
Q ss_pred CcEEEEeC--CCCcEEEEEecc-----C--CCcceeEEEE--ecCCCCCCCCCCC-EEEEEeCCCeEEEEEcCCC-----
Q 047036 333 PGVQQLDI--ETGKIVTEWKFE-----K--DGTDITMRDI--TNDTKSSQLDPSE-STFLGLDDNRLCQWDMRDR----- 395 (634)
Q Consensus 333 ~TIrlWDl--eTGK~V~~lkgH-----~--~~V~I~vvsf--sPd~K~~q~~~g~-~laSGS~D~tIklWD~R~~----- 395 (634)
++|+++++ .+++ +..+..- . ..+ .=+|+ +|.. +. +++....++.+..|++...
T Consensus 99 n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~p--yGlcly~~~~~-------g~~yafV~~k~G~~~q~~l~~~~~g~~ 168 (355)
T 3amr_A 99 NTIEIYAIDGKNGT-LQSMTDPDHPIATAINEV--YGFTLYHSQKT-------GKYYAMVTGKEGEFEQYELKADKNGYI 168 (355)
T ss_dssp CEEEEEEECTTTCC-EEECSCTTSCEECCCSSC--CCEEEEECTTT-------CCEEEEEECSSSEEEEEEEEECTTSCE
T ss_pred CeEEEEEECCCCCc-eeeccccccCcCCCCCCe--eEEEEEecCCC-------CcEEEEEECCCCeEEEEEEEeCCCCcc
Confidence 68999955 6665 5555210 1 111 22355 5541 22 6888888899999998431
Q ss_pred -CceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEecc--cc--ccccccc--cCCCCCeEE
Q 047036 396 -SGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKT--SM--RQAKTAF--PGLGSPITH 468 (634)
Q Consensus 396 -~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~--t~--r~akt~L--~GH~d~Its 468 (634)
.++|+++.- + .-.-.|++-...|+|.+|-.+.-|..||.. +. +.....+ .++...|-+
T Consensus 169 ~~~lVR~f~l----------g-----sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEG 233 (355)
T 3amr_A 169 SGKKVRAFKM----------N-----SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEG 233 (355)
T ss_dssp EEEEEEEEEC----------S-----SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEE
T ss_pred cceEEEEecC----------C-----CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcce
Confidence 123444421 1 112345555567899999999888888854 11 1122222 344457899
Q ss_pred EEE--CCCCC-EEEEEc--CCcEEEEEcccccCCCCeeeee
Q 047036 469 VDV--TYDGK-WILGTT--DTYLILICTLFSDKDGKTKTGF 504 (634)
Q Consensus 469 Vdf--SpDGk-~LlSS~--D~tIrLWD~~~~~~~G~~~~gF 504 (634)
|++ .++|+ ||++|+ ++++.+||.. ...+.+..|
T Consensus 234 Lai~~~~~g~gyLivSsQG~~s~~Vydr~---~~~~~vg~f 271 (355)
T 3amr_A 234 LTIYYAADGKGYLMASSQGNSSYAIYDRQ---GKNKYVADF 271 (355)
T ss_dssp EEEEECGGGCEEEEEEEGGGTEEEEEESS---TTCCEEEEE
T ss_pred EEEEecCCCCEEEEEEcCCCCEEEEEECC---CCCcEEEEE
Confidence 999 78888 888755 7899999964 234444444
No 277
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=93.63 E-value=2.3 Score=44.86 Aligned_cols=173 Identities=12% Similarity=0.037 Sum_probs=97.2
Q ss_pred cccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEE-Eec----cCCCcceeEEEE---ecCCCCCCC
Q 047036 301 IGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTE-WKF----EKDGTDITMRDI---TNDTKSSQL 372 (634)
Q Consensus 301 ~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~-lkg----H~~~V~I~vvsf---sPd~K~~q~ 372 (634)
.+...-|.+..++..++.+++++-.. ++|..||+..|..+.. +.+ ....+.+.-+.+ .|+
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~------g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~------ 76 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYK------GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS------ 76 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTT------TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC------
T ss_pred cCcccCCcCccCcCCCCEEEEEeccC------CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC------
Confidence 34556788888877667667666543 7999999987765544 222 111111123355 454
Q ss_pred CCCCEEEEEe-------------CCCeEEEEEcC---CCCce-EEecccCCCCccccccccccccCcceEEEEECCCCeE
Q 047036 373 DPSESTFLGL-------------DDNRLCQWDMR---DRSGI-VQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSI 435 (634)
Q Consensus 373 ~~g~~laSGS-------------~D~tIklWD~R---~~~~~-Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~I 435 (634)
+.++++.- .++.|..+|+. +++.+ ...|......+.. ..+..+ ..+.-++..++|.+
T Consensus 77 --grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~-~~g~~~---~~~nDvavD~~Gna 150 (334)
T 2p9w_A 77 --KRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEK-KAGKRP---FGVVQSAQDRDGNS 150 (334)
T ss_dssp --CEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHH-HHSSCC---EEEEEEEECTTSCE
T ss_pred --CcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccc-cccccc---cCCceeEECCCCCE
Confidence 45555432 27889999998 55421 1122110000000 000011 12456788888854
Q ss_pred -EEEECC-CcEEEEecccccccccc---c--cCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcc
Q 047036 436 -VVGSLD-GKIRLYSKTSMRQAKTA---F--PGLGSPITHVDVTYDGKWILG-TTDTYLILICTL 492 (634)
Q Consensus 436 -ASGS~D-GtIRLWD~~t~r~akt~---L--~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~ 492 (634)
++++.- +.|-..|..+. ....- . ....--.++|+++|||+.|+. ...+.|.-+|+.
T Consensus 151 YVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 151 YVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred EEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 447777 88888886642 12111 1 111123579999999998887 338888888854
No 278
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=93.51 E-value=1.6 Score=43.38 Aligned_cols=121 Identities=12% Similarity=0.113 Sum_probs=73.8
Q ss_pred CCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccc
Q 047036 340 IETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFS 419 (634)
Q Consensus 340 leTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~ 419 (634)
..+.+++.+|..+.. . .-++++|+ +.+.++-...++|.+||+..+ ....+.
T Consensus 19 ~~~~~~~~~~p~~~~-p--egia~~~~--------g~lyv~d~~~~~I~~~d~~g~--~~~~~~---------------- 69 (306)
T 2p4o_A 19 LAPAKIITSFPVNTF-L--ENLASAPD--------GTIFVTNHEVGEIVSITPDGN--QQIHAT---------------- 69 (306)
T ss_dssp CCCEEEEEEECTTCC-E--EEEEECTT--------SCEEEEETTTTEEEEECTTCC--EEEEEE----------------
T ss_pred CCCceEeEeCCCCCC-c--ceEEECCC--------CCEEEEeCCCCeEEEECCCCc--eEEEEe----------------
Confidence 345678888854432 1 23478887 567777778999999998753 222211
Q ss_pred cCcceEEEEECCCCeEEEEE--CCC-cEEEEeccccccccc--cccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEc
Q 047036 420 RGTNFQCFASTGDGSIVVGS--LDG-KIRLYSKTSMRQAKT--AFPGLGSPITHVDVTYDGKWILG-TTDTYLILICT 491 (634)
Q Consensus 420 ~~~~fssva~s~dG~IASGS--~DG-tIRLWD~~t~r~akt--~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~ 491 (634)
......+++++++|.|+++. .++ .|..+|..+++ ... .+++ .....++++.+++..+++ +..+.|..+|.
T Consensus 70 ~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~-~~~~~~~~~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~ 145 (306)
T 2p4o_A 70 VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT-VETLLTLPD-AIFLNGITPLSDTQYLTADSYRGAIWLIDV 145 (306)
T ss_dssp CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC-EEEEEECTT-CSCEEEEEESSSSEEEEEETTTTEEEEEET
T ss_pred CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe-EEEEEeCCC-ccccCcccccCCCcEEEEECCCCeEEEEeC
Confidence 01135678899999666555 333 35556755543 222 2222 334577888887776666 45788888885
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=93.37 E-value=2.7 Score=44.72 Aligned_cols=158 Identities=10% Similarity=0.053 Sum_probs=84.5
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCC-EEEEEeCCCeEEEEEcCC
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSE-STFLGLDDNRLCQWDMRD 394 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~-~laSGS~D~tIklWD~R~ 394 (634)
++.++++...+ +.|+++|+.+++....+......-+ .-++|+|+ ++ +.++-...++|.++|...
T Consensus 237 ~g~lyv~d~~~------~~V~~~~~~~~~~~~~~~~~~~~~P-~gia~~pd--------G~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 237 NGELYFNSWNA------GQVFRYDFTTQETTPLFTIQDSGWE-FHIQFHPS--------GNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TCCEEEEETTT------TEEEEEETTTTEEEEEEECSSSSCC-EEEEECTT--------SSEEEEEETTTTEEEEEEEET
T ss_pred CCEEEEEECCC------CEEEEEECCCCcEEEEEEcCCCCcc-eeEEEcCC--------CCEEEEEECCCCEEEEEeCCc
Confidence 45556665443 5899999987765333322211112 23499998 56 556666789999988763
Q ss_pred C-Cce--EEecccCCCCcccccccc--ccccCcceEEEEEC--------CCCeEEEE-ECCCcEEEEeccccccccccc-
Q 047036 395 R-SGI--VQNMVKGDSPVLHWTQGH--QFSRGTNFQCFAST--------GDGSIVVG-SLDGKIRLYSKTSMRQAKTAF- 459 (634)
Q Consensus 395 ~-~~~--Vq~l~gh~s~V~~~~~g~--~y~~~~~fssva~s--------~dG~IASG-S~DGtIRLWD~~t~r~akt~L- 459 (634)
. +.. ++.+.+.... ..+..+. .-....+...++.. ++|.|.++ ...+.||.+|..+ + ..+..
T Consensus 302 ~~~~~~~~~~~ag~~g~-~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G-~-v~~~~g 378 (430)
T 3tc9_A 302 KTKRLTTPYIVCGQQGA-KDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQG-R-VTTFAG 378 (430)
T ss_dssp TTTEECCCEEEEECTTC-BCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTS-E-EEEEEE
T ss_pred ccccccceEEEeccCCC-CCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCC-c-EEEEEe
Confidence 2 111 2233221000 0000110 00112223244543 45766655 4567899998543 2 22211
Q ss_pred ------cC--C--------CCCeEEEEECC-CCCEEEE-EcCCcEEEEEc
Q 047036 460 ------PG--L--------GSPITHVDVTY-DGKWILG-TTDTYLILICT 491 (634)
Q Consensus 460 ------~G--H--------~d~ItsVdfSp-DGk~LlS-S~D~tIrLWD~ 491 (634)
.| . -..-.+|+++| +|..+++ +..+.|+.++.
T Consensus 379 ~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 379 RGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp CCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 11 0 12468999999 5777777 67788888874
No 280
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.17 E-value=2.1 Score=47.37 Aligned_cols=149 Identities=10% Similarity=0.116 Sum_probs=84.3
Q ss_pred eEEeC--CcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCc-ceeEEEE-------ecCCCCCCCCCCCEEEE
Q 047036 311 LLMRG--ETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGT-DITMRDI-------TNDTKSSQLDPSESTFL 380 (634)
Q Consensus 311 mL~~~--D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V-~I~vvsf-------sPd~K~~q~~~g~~laS 380 (634)
|.+++ +.+++++.... +.|++.|++++++..-+....... ...-++| +++ +..++.
T Consensus 144 la~dp~~~~~Lyv~~~~~------~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~--------G~~lyv 209 (496)
T 3kya_A 144 LAFDPLNKDHLYICYDGH------KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADE--------AEYMIV 209 (496)
T ss_dssp EEEETTEEEEEEEEEETE------EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCT--------TCEEEE
T ss_pred EEEccCCCCEEEEEECCC------CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCC--------CCEEEE
Confidence 44453 34555555432 479999999777655444322111 1234588 887 565666
Q ss_pred EeCCC-------eEEEEEcCCCCceE-----EecccCCCCccccccccccccCcceEEEEECC-CCeEEE-EECCCcEEE
Q 047036 381 GLDDN-------RLCQWDMRDRSGIV-----QNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVV-GSLDGKIRL 446 (634)
Q Consensus 381 GS~D~-------tIklWD~R~~~~~V-----q~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IAS-GS~DGtIRL 446 (634)
+...+ .|.+.+....+... +.+. .|.+ ...++.+| +|+|.+ -...+.|..
T Consensus 210 ad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-------------~~~~---p~giavdp~~g~LYvtd~~~g~V~r 273 (496)
T 3kya_A 210 AIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-------------AYKQ---CNGATIHPINGELYFNSYEKGQVFR 273 (496)
T ss_dssp EECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-------------EESC---CCCEEECTTTCCEEEEETTTTEEEE
T ss_pred EeCCCCCcccCceEEEEecCCCCceeecccceeec-------------cCCC---ceEEEEcCCCCeEEEEECCCCEEEE
Confidence 65543 36677633311110 1111 1211 13457788 566554 557778999
Q ss_pred Eecc-------ccccc--------------cccccCCCCCeEEEEECCCCCE-EEE-EcCCcEEEEEc
Q 047036 447 YSKT-------SMRQA--------------KTAFPGLGSPITHVDVTYDGKW-ILG-TTDTYLILICT 491 (634)
Q Consensus 447 WD~~-------t~r~a--------------kt~L~GH~d~ItsVdfSpDGk~-LlS-S~D~tIrLWD~ 491 (634)
+|+. ++. . ...++ -+..-++|+|+|+|++ .++ +..+.|+.++.
T Consensus 274 ~d~~~~~~~~~tg~-~~tp~~~~~~g~~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 274 LDLVDYFKTIKNGG-SWDPIVKNNPNTFKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp ECHHHHHHHHHTTC-CCCCBGGGCTTTEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EecccccccccCce-eecccccccccccceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 9986 332 1 01122 2345689999999995 445 77889999774
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=92.48 E-value=8.9 Score=38.48 Aligned_cols=138 Identities=11% Similarity=0.145 Sum_probs=80.1
Q ss_pred CcEEEEeCCCCcEEEEEe--ccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCc--eEEecccCCCC
Q 047036 333 PGVQQLDIETGKIVTEWK--FEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSG--IVQNMVKGDSP 408 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lk--gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~--~Vq~l~gh~s~ 408 (634)
..|+..|+. |++++++. |..+ ..-+++.++ +.++++.=.+++|.+.++..... .+.... -+
T Consensus 49 ~~I~~ld~~-g~v~~~i~l~g~~D---~EGIa~~~~--------g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~---~~ 113 (255)
T 3qqz_A 49 AAIVEMTTN-GDLIRTIPLDFVKD---LETIEYIGD--------NQFVISDERDYAIYVISLTPNSEVKILKKIK---IP 113 (255)
T ss_dssp EEEEEEETT-CCEEEEEECSSCSS---EEEEEECST--------TEEEEEETTTTEEEEEEECTTCCEEEEEEEE---CC
T ss_pred CeEEEEeCC-CCEEEEEecCCCCC---hHHeEEeCC--------CEEEEEECCCCcEEEEEcCCCCeeeeeeeec---cc
Confidence 689999998 99999974 3333 123355555 44445544678899888765442 122221 00
Q ss_pred ccccccccccccCcceEEEEECCCC-eEEEEECCCcEEEEeccccc--cccccc-----c--CCCCCeEEEEECCCCCEE
Q 047036 409 VLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSLDGKIRLYSKTSMR--QAKTAF-----P--GLGSPITHVDVTYDGKWI 478 (634)
Q Consensus 409 V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~DGtIRLWD~~t~r--~akt~L-----~--GH~d~ItsVdfSpDGk~L 478 (634)
+ + ....+..|..+|+++.+ +|.++......+||...+.. ...+.+ . .+-.-+.+|+|.|.-..|
T Consensus 114 ~-----~-~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~l 187 (255)
T 3qqz_A 114 L-----Q-ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTL 187 (255)
T ss_dssp C-----S-SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEE
T ss_pred c-----c-cccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeE
Confidence 0 0 11235568999999987 77777776666666654210 001111 0 112246899999876554
Q ss_pred EE-E-cCCcEEEEEc
Q 047036 479 LG-T-TDTYLILICT 491 (634)
Q Consensus 479 lS-S-~D~tIrLWD~ 491 (634)
+. | ..+.|..+|.
T Consensus 188 liLS~~s~~L~~~d~ 202 (255)
T 3qqz_A 188 LVLSHESRALQEVTL 202 (255)
T ss_dssp EEEETTTTEEEEECT
T ss_pred EEEECCCCeEEEEcC
Confidence 44 4 4567777774
No 282
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.23 E-value=12 Score=43.47 Aligned_cols=161 Identities=10% Similarity=-0.019 Sum_probs=88.1
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEec-cCCCcceeEEEEecCCCCCCCCCCCEEEEEe-C
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKF-EKDGTDITMRDITNDTKSSQLDPSESTFLGL-D 383 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkg-H~~~V~I~vvsfsPd~K~~q~~~g~~laSGS-~ 383 (634)
.|.++.+.-..++++++.... ++|++.|+. |+.++.+-. .-.. + .-+++.|. ...|+-.- .
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~------~~I~v~~ld-G~~~~~l~~~~l~~-P-~gIaVDp~--------~g~LYwtD~g 534 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVL------GTVSVADTK-GVKRKTLFRENGSK-P-RAIVVDPV--------HGFMYWTDWG 534 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTT------TEEEEEETT-SSSEEEEEECTTCC-E-EEEEEETT--------TTEEEEEECS
T ss_pred CcceeeeeecCCcEEEEecCC------CeEEEEeCC-CCeEEEEEeCCCCC-c-ceEEEecC--------CCCEEEecCC
Confidence 566644433445666666554 689999997 555555533 2222 2 23478886 23454443 3
Q ss_pred C-CeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEE-ECCCcEEEEecccccccccccc
Q 047036 384 D-NRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVG-SLDGKIRLYSKTSMRQAKTAFP 460 (634)
Q Consensus 384 D-~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASG-S~DGtIRLWD~~t~r~akt~L~ 460 (634)
. ..|.+.++.... +..+... . . ..-..+++++ .++|+.+ +..+.|+..|+.+. .....+.
T Consensus 535 ~~~~I~~~~~dG~~--~~~lv~~-~----------l---~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~-~~~~v~~ 597 (791)
T 3m0c_C 535 TPAKIKKGGLNGVD--IYSLVTE-N----------I---QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILE 597 (791)
T ss_dssp SSCEEEEEETTSCC--EEEEECS-S----------C---SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEE
T ss_pred CCCeEEEEecCCCc--eEEEEeC-C----------C---CCceEEEEecCCCeEEEEeCCCCcEEEEecCCC-ceEEEec
Confidence 3 788888886432 2333210 0 0 1135678875 4577665 45578999998763 2333333
Q ss_pred CCC--CCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeec
Q 047036 461 GLG--SPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 461 GH~--d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
+.+ ....+|++..+ +..++ ...+.|...|.. +|+.+..+.
T Consensus 598 ~~~~l~~P~glav~~~-~lYwtD~~~~~I~~~dk~----tG~~~~~l~ 640 (791)
T 3m0c_C 598 DEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL----TGSDVNLLA 640 (791)
T ss_dssp CTTTTSSEEEEEEETT-EEEEEETTTTEEEEEETT----TCCCCEEEE
T ss_pred CCCccCCCCEEEEeCC-EEEEEECCCCEEEEEeCC----CCcceEEee
Confidence 211 23457777433 33345 566788888753 455555554
No 283
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=92.08 E-value=13 Score=38.69 Aligned_cols=163 Identities=5% Similarity=-0.084 Sum_probs=89.2
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC-
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD- 384 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D- 384 (634)
.|.++.+.-..++++++.... +.|.+.++........+...-... .-+++.|.. +.+.++-...
T Consensus 160 ~p~glavd~~~g~lY~~d~~~------~~I~~~~~dg~~~~~l~~~~l~~P--~giavdp~~-------g~ly~td~~~~ 224 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGT------SRIEVANLDGAHRKVLLWQSLEKP--RAIALHPME-------GTIYWTDWGNT 224 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTT------TEEEECBTTSCSCEEEECSSCSCE--EEEEEETTT-------TEEEEEECSSS
T ss_pred CccEEEEEeCCCeEEEEcCCC------CeEEEEeCCCCceEEeecCCCCCC--cEEEEEcCC-------CeEEEeccCCC
Confidence 465544433455666666553 589999987433222222222221 234778762 3344454445
Q ss_pred CeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEE-ECCCcEEEEeccccccccccccCC
Q 047036 385 NRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVG-SLDGKIRLYSKTSMRQAKTAFPGL 462 (634)
Q Consensus 385 ~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASG-S~DGtIRLWD~~t~r~akt~L~GH 462 (634)
+.|.+.|+..... ..+.. .. -..-..+++++ +++|..+ +..+.|+.+|..+. .....+...
T Consensus 225 ~~I~r~~~dG~~~--~~~~~-~~-------------~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~~ 287 (386)
T 3v65_B 225 PRIEASSMDGSGR--RIIAD-TH-------------LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-HRKAVISQG 287 (386)
T ss_dssp CEEEEEETTSCSC--EEEEC-SS-------------CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC-SCEEEECSS
T ss_pred CEEEEEeCCCCCc--EEEEE-CC-------------CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC-eeEEEEECC
Confidence 7899998875322 22210 00 00125678885 4566554 56678999998753 223333322
Q ss_pred CCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeec
Q 047036 463 GSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 463 ~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
.....+|++. .|....+ ...+.|..++.. +|+.+..+.
T Consensus 288 ~~~P~giav~-~~~ly~td~~~~~V~~~~~~----~G~~~~~i~ 326 (386)
T 3v65_B 288 LPHPFAITVF-EDSLYWTDWHTKSINSANKF----TGKNQEIIR 326 (386)
T ss_dssp CSSEEEEEEE-TTEEEEEETTTTEEEEEETT----TCCSCEEEE
T ss_pred CCCceEEEEE-CCEEEEeeCCCCeEEEEECC----CCcceEEEc
Confidence 3346889993 4444445 667788888843 465555554
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=91.83 E-value=23 Score=41.12 Aligned_cols=144 Identities=6% Similarity=-0.072 Sum_probs=81.1
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCC----cEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEE
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETG----KIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWD 391 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTG----K~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD 391 (634)
++.++++.... +.|+.+++... .....+...-..+ .-+++.+.+ +.+.++-+..++|.+.|
T Consensus 435 ~~~lY~sD~~~------~~I~~~~l~g~~~~~~~~~vi~~~l~~P--~GLAvD~~~-------~~LY~tD~~~~~I~v~~ 499 (791)
T 3m0c_C 435 SNRIYWSDLSQ------RMICSTQLDRAHGVSSYDTVISRDIQAP--DGLAVDWIH-------SNIYWTDSVLGTVSVAD 499 (791)
T ss_dssp TTEEEEEETTT------TEEEEEEC--------CEEEECSSCSCC--CEEEEETTT-------TEEEEEETTTTEEEEEE
T ss_pred CCeeEEeeccc------eeEEEEeccCCCCCcceeEEEecCCCCc--ceeeeeecC-------CcEEEEecCCCeEEEEe
Confidence 34444555443 57999998742 1122222121221 224777652 24555667788999999
Q ss_pred cCCCCceEEecccCCCCccccccccccccCcceEEEEECCC-CeEEEEEC--CCcEEEEeccccccccccccCCCCCeEE
Q 047036 392 MRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD-GSIVVGSL--DGKIRLYSKTSMRQAKTAFPGLGSPITH 468 (634)
Q Consensus 392 ~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d-G~IASGS~--DGtIRLWD~~t~r~akt~L~GH~d~Its 468 (634)
+..+. +..|... .-..-..+|+.+. |+|+.... .+.|...++.+. ..+..+...-...++
T Consensus 500 ldG~~--~~~l~~~--------------~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~-~~~~lv~~~l~~P~G 562 (791)
T 3m0c_C 500 TKGVK--RKTLFRE--------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNG 562 (791)
T ss_dssp TTSSS--EEEEEEC--------------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEE
T ss_pred CCCCe--EEEEEeC--------------CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-ceEEEEeCCCCCceE
Confidence 87533 2333210 0012357788775 67666543 368998887763 233334433356799
Q ss_pred EEECCCCCEEE-E-EcCCcEEEEEc
Q 047036 469 VDVTYDGKWIL-G-TTDTYLILICT 491 (634)
Q Consensus 469 VdfSpDGk~Ll-S-S~D~tIrLWD~ 491 (634)
|+|.|.+..|. + +...+|...++
T Consensus 563 LavD~~~~~LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 563 ITLDLLSGRLYWVDSKLHSISSIDV 587 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEecCCCeEEEEeCCCCcEEEEec
Confidence 99998777665 4 55678888885
No 285
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=91.62 E-value=13 Score=37.80 Aligned_cols=143 Identities=6% Similarity=-0.090 Sum_probs=79.8
Q ss_pred cceEEecCCCCCCCCCCcEEEEeCCCCcEEEE-EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCC
Q 047036 317 TNMMLMSPLKDGKPQAPGVQQLDIETGKIVTE-WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDR 395 (634)
Q Consensus 317 ~~mllsss~d~~~~~~~TIrlWDleTGK~V~~-lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~ 395 (634)
+.+..+.... +.|+.+++..+..... +...-... .-+++.+.. +.+.++-...++|.+.++...
T Consensus 47 ~~lyw~D~~~------~~I~r~~~~g~~~~~~~~~~~l~~p--~glavd~~~-------g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 47 GLIYWSDVSE------EAIKRTEFNKTESVQNVVVSGLLSP--DGLACDWLG-------EKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp TEEEEEETTT------TEEEEEETTSSSCCCEEEEECCSCC--CEEEEETTT-------TEEEEEETTTTEEEEEETTSC
T ss_pred CEEEEEECCC------CcEEEEEccCCCceEEEEcCCCCCc--cEEEEEcCC-------CeEEEEECCCCEEEEEECCCC
Confidence 3445555443 6899999886632111 11111111 123666641 345566667789999998753
Q ss_pred CceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEEE--CCCcEEEEeccccccccccccCCCCCeEEEEEC
Q 047036 396 SGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVGS--LDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVT 472 (634)
Q Consensus 396 ~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASGS--~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfS 472 (634)
.. ..+.. . .-..-..+++.| +|+|+.+. ..+.|...+..+. .....+..--..-++|+|+
T Consensus 112 ~~--~~l~~--~------------~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~l~~Pnglavd 174 (318)
T 3sov_A 112 LR--KVLFW--Q------------ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWPNGLTLD 174 (318)
T ss_dssp SC--EEEEC--S------------SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEEEEEE
T ss_pred cE--EEEEe--C------------CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEECCCCCccEEEEe
Confidence 22 22210 0 001235677776 46766655 3578888887652 1222222222345899999
Q ss_pred CCCCEEE-E-EcCCcEEEEEc
Q 047036 473 YDGKWIL-G-TTDTYLILICT 491 (634)
Q Consensus 473 pDGk~Ll-S-S~D~tIrLWD~ 491 (634)
|++..|. + +..+.|..+|.
T Consensus 175 ~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 175 YEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp TTTTEEEEEETTTTEEEEEET
T ss_pred ccCCEEEEEECCCCEEEEEcC
Confidence 9777664 5 66788888885
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=91.05 E-value=17 Score=38.08 Aligned_cols=144 Identities=6% Similarity=-0.065 Sum_probs=80.1
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCC----cEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEE
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETG----KIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWD 391 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTG----K~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD 391 (634)
++.+..+.... +.|+.+++..+ .....+...-... .-+++.+.. +.+.++-...++|.+.|
T Consensus 123 ~~~lywsD~~~------~~I~~~~~~g~~~~~~~~~~~~~~~~~p--~glavD~~~-------~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 123 SNRIYWSDLSQ------RMICSTQLDRAHGVSSYDTVISRDIQAP--DGLAVDWIH-------SNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp TTEEEEEETTT------TEEEEEEC------CCCEEEECSSCSCE--EEEEEETTT-------TEEEEEETTTTEEEEEC
T ss_pred cCceEEEecCC------CeEEEEEcccCCCCCcceEEEeCCCCCc--ccEEEEecC-------CceEEEECCCCeEEEEe
Confidence 34445555443 57999998752 1222222111111 233666531 34555666778999988
Q ss_pred cCCCCceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEEE--CCCcEEEEeccccccccccccCCCCCeEE
Q 047036 392 MRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVGS--LDGKIRLYSKTSMRQAKTAFPGLGSPITH 468 (634)
Q Consensus 392 ~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASGS--~DGtIRLWD~~t~r~akt~L~GH~d~Its 468 (634)
+..+. +..+... .-..-..+++.| +|+|+... ..+.|...++.+. .....+..--...++
T Consensus 188 ~~g~~--~~~l~~~--------------~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-~~~~~~~~~l~~P~g 250 (400)
T 3p5b_L 188 TKGVK--RKTLFRE--------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNG 250 (400)
T ss_dssp TTTCS--EEEEEEC--------------SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-SCEEEECSSCSCEEE
T ss_pred CCCCc--eEEEEeC--------------CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-ccEEEEECCCCceEE
Confidence 87543 2232100 001135678877 56766554 2478999987753 222333332346799
Q ss_pred EEECCCCCEEE-E-EcCCcEEEEEc
Q 047036 469 VDVTYDGKWIL-G-TTDTYLILICT 491 (634)
Q Consensus 469 VdfSpDGk~Ll-S-S~D~tIrLWD~ 491 (634)
|+|+|++..|. + +..++|..+|.
T Consensus 251 lavd~~~~~lY~aD~~~~~I~~~d~ 275 (400)
T 3p5b_L 251 ITLDLLSGRLYWVDSKLHSISSIDV 275 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEeCCCEEEEEECCCCEEEEEeC
Confidence 99999887775 4 66788888885
No 287
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=90.49 E-value=2.9 Score=46.62 Aligned_cols=68 Identities=6% Similarity=-0.008 Sum_probs=43.0
Q ss_pred eCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe-CC-----CeE
Q 047036 314 RGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL-DD-----NRL 387 (634)
Q Consensus 314 ~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS-~D-----~tI 387 (634)
..++.+++.++.+. .++++||+.+++-...-..+..... ...++.++ +.+++.|+ .+ +.+
T Consensus 251 ~~~g~lyv~GG~~~-----~~v~~yd~~t~~W~~~~~~~~~R~~-~s~~~~~d--------g~iyv~GG~~~~~~~~~~~ 316 (656)
T 1k3i_A 251 DGNGQIVVTGGNDA-----KKTSLYDSSSDSWIPGPDMQVARGY-QSSATMSD--------GRVFTIGGSWSGGVFEKNG 316 (656)
T ss_dssp CTTSCEEEECSSST-----TCEEEEEGGGTEEEECCCCSSCCSS-CEEEECTT--------SCEEEECCCCCSSSCCCCE
T ss_pred CCCCCEEEeCCCCC-----CceEEecCcCCceeECCCCCccccc-cceEEecC--------CeEEEEeCcccCCcccccc
Confidence 35677888888654 4799999998864432111211111 12244455 56788887 44 689
Q ss_pred EEEEcCCC
Q 047036 388 CQWDMRDR 395 (634)
Q Consensus 388 klWD~R~~ 395 (634)
.+||+.+.
T Consensus 317 e~yd~~t~ 324 (656)
T 1k3i_A 317 EVYSPSSK 324 (656)
T ss_dssp EEEETTTT
T ss_pred eEeCCCCC
Confidence 99999875
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=89.39 E-value=1.5 Score=49.88 Aligned_cols=99 Identities=6% Similarity=-0.061 Sum_probs=56.8
Q ss_pred CEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCC-CeEEEEEC--CCcEEEEecccc
Q 047036 376 ESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD-GSIVVGSL--DGKIRLYSKTSM 452 (634)
Q Consensus 376 ~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d-G~IASGS~--DGtIRLWD~~t~ 452 (634)
.+.++-...++|.+.|+.... +..+.... ...-..+++.|. |+|+.+.. .+.|..+++.+.
T Consensus 466 ~LY~tD~~~~~I~v~d~dg~~--~~~l~~~~--------------~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 466 NIYWTDSVLGTVSVADTKGVK--RKTLFREQ--------------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 529 (699)
T ss_dssp BCEECCTTTSCEEEEBSSSCC--EEEECCCS--------------SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC
T ss_pred cEEEEeccCCeEEEEecCCCc--eEEEEeCC--------------CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC
Confidence 455555667899999987532 23332100 001235677764 56555432 378888887652
Q ss_pred ccccccccCCCCCeEEEEECCCCCEE-EE-EcCCcEEEEEc
Q 047036 453 RQAKTAFPGLGSPITHVDVTYDGKWI-LG-TTDTYLILICT 491 (634)
Q Consensus 453 r~akt~L~GH~d~ItsVdfSpDGk~L-lS-S~D~tIrLWD~ 491 (634)
..+..+..--...++|+|+|++.+| ++ +..+.|..+|+
T Consensus 530 -~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~ 569 (699)
T 1n7d_A 530 -DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 569 (699)
T ss_dssp -CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECS
T ss_pred -CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEcc
Confidence 1222222222345799999986655 45 66778888885
No 289
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=88.97 E-value=8.2 Score=39.91 Aligned_cols=128 Identities=16% Similarity=0.157 Sum_probs=64.6
Q ss_pred CcEEEEeCCCCc-EEEEEe---ccCCCcceeEEEEecCCCCCCCCCCCEEEEEeC----C----CeEEEEEcCCCC-ce-
Q 047036 333 PGVQQLDIETGK-IVTEWK---FEKDGTDITMRDITNDTKSSQLDPSESTFLGLD----D----NRLCQWDMRDRS-GI- 398 (634)
Q Consensus 333 ~TIrlWDleTGK-~V~~lk---gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~----D----~tIklWD~R~~~-~~- 398 (634)
+.|+++| ..|+ .+..+. ...... .-++|+|+ |++ +..|+.+.. + +.|.+|++.... .+
T Consensus 49 g~I~~~d-~~G~~~~~~~~v~~~g~~g~--~gia~~pd--f~~---~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~ 120 (354)
T 3a9g_A 49 GRLVLIS-PSGKKLVASFDVANVGEAGL--LGLALHPE--FPK---KSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLK 120 (354)
T ss_dssp TEEEEEC-SSCEEEEEECCCCCSTTCSE--EEEEECTT--TTT---SCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEE
T ss_pred CEEEEEe-CCCceEeeccceeecCCCce--eeEEeCCC--CCc---CCEEEEEEeccCCCCCcceEEEEEEECCCCcCcC
Confidence 5799888 4576 233221 111222 23488887 433 345555443 3 788888876431 10
Q ss_pred -EEec-ccCCCCccccccccccccCcceEEEEECCCCeEEEEECC--------------CcEEEEeccccc-------cc
Q 047036 399 -VQNM-VKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLD--------------GKIRLYSKTSMR-------QA 455 (634)
Q Consensus 399 -Vq~l-~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~D--------------GtIRLWD~~t~r-------~a 455 (634)
.+.+ .+-... ..| .-..+++.++|+|.++..| |.|.-+|..+.- ..
T Consensus 121 ~~~~l~~~~~~~-----~~h------~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~ 189 (354)
T 3a9g_A 121 EVKTLIDGIPGA-----YIH------NGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNS 189 (354)
T ss_dssp EEEEEEEEEECC-----SSC------CCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTC
T ss_pred ccEEEEEcCCCC-----CCc------CCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCC
Confidence 1111 000000 011 1235788999966554322 556666654310 01
Q ss_pred cccccCCCCCeEEEEECC-CCCEEEE
Q 047036 456 KTAFPGLGSPITHVDVTY-DGKWILG 480 (634)
Q Consensus 456 kt~L~GH~d~ItsVdfSp-DGk~LlS 480 (634)
.....||..| .+|+|+| +|+..++
T Consensus 190 ~i~a~G~rnp-~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 190 PIWSYGHRNP-QGIDWHRASGVMVAT 214 (354)
T ss_dssp CEEEECCSCC-CEEEECTTTCCEEEE
T ss_pred cEEEEccCCc-ceEEEeCCCCCEEEE
Confidence 1112255554 6899999 7887777
No 290
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=88.81 E-value=19 Score=37.78 Aligned_cols=65 Identities=11% Similarity=0.142 Sum_probs=41.6
Q ss_pred eEEEEECCCCeEEEEEC------------------CCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEE-E-EcC
Q 047036 424 FQCFASTGDGSIVVGSL------------------DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWIL-G-TTD 483 (634)
Q Consensus 424 fssva~s~dG~IASGS~------------------DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~Ll-S-S~D 483 (634)
..-++..++|.+.+++. .|.|.-||. + .+...+.+.. .-++|+|||||++|. + |..
T Consensus 167 pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~-~~~~~~~~l~-~pNGia~spDg~~lYvadt~~ 242 (355)
T 3sre_A 167 VNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--N-DVRVVAEGFD-FANGINISPDGKYVYIAELLA 242 (355)
T ss_dssp EEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--T-CCEEEEEEES-SEEEEEECTTSSEEEEEEGGG
T ss_pred CceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--C-eEEEeecCCc-ccCcceECCCCCEEEEEeCCC
Confidence 45566777886655543 244544554 2 2333344433 359999999998875 4 678
Q ss_pred CcEEEEEcc
Q 047036 484 TYLILICTL 492 (634)
Q Consensus 484 ~tIrLWD~~ 492 (634)
+.|..+++.
T Consensus 243 ~~I~~~~~~ 251 (355)
T 3sre_A 243 HKIHVYEKH 251 (355)
T ss_dssp TEEEEEEEC
T ss_pred CeEEEEEEC
Confidence 899999864
No 291
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=87.47 E-value=27 Score=35.62 Aligned_cols=162 Identities=6% Similarity=-0.058 Sum_probs=90.5
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEE-eccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEW-KFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD 384 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~l-kgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D 384 (634)
.|.++.+.-..++++++.... +.|.+.++. |+....+ ...-.. + .-+++.|.. +.+.++-...
T Consensus 117 ~p~glavd~~~g~ly~~d~~~------~~I~~~~~d-G~~~~~l~~~~l~~-P-~~iavdp~~-------g~ly~td~~~ 180 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGT------SRIEVANLD-GAHRKVLLWQSLEK-P-RAIALHPME-------GTIYWTDWGN 180 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTT------TEEEEEETT-SCSCEEEECTTCSC-E-EEEEEETTT-------TEEEEEECSS
T ss_pred CccEEEEecCCCeEEEEcCCC------CeEEEEcCC-CCceEEEEeCCCCC-c-ceEEEecCc-------CeEEEeccCC
Confidence 465544433455666666553 589999987 4433333 222222 1 234788862 3455555555
Q ss_pred -CeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECC-CCeEEEE-ECCCcEEEEeccccccccccccC
Q 047036 385 -NRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTG-DGSIVVG-SLDGKIRLYSKTSMRQAKTAFPG 461 (634)
Q Consensus 385 -~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~-dG~IASG-S~DGtIRLWD~~t~r~akt~L~G 461 (634)
+.|.+.|+.... ...+.. . + -..-..+++++ +++|..+ +..+.|+.+|..+. .....+..
T Consensus 181 ~~~I~r~~~dG~~--~~~~~~--~-------~-----~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~-~~~~~~~~ 243 (349)
T 3v64_C 181 TPRIEASSMDGSG--RRIIAD--T-------H-----LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-HRKAVISQ 243 (349)
T ss_dssp SCEEEEEETTSCS--CEESCC--S-------S-----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECS
T ss_pred CCEEEEEeCCCCC--cEEEEE--C-------C-----CCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC-ceEEEEeC
Confidence 889999886432 223310 0 0 01125678886 4566554 55678999998753 22333333
Q ss_pred CCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeec
Q 047036 462 LGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 462 H~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
......+|++ ..|...++ ...+.|..++.. +|+.+..+.
T Consensus 244 ~~~~P~giav-~~~~ly~td~~~~~V~~~~~~----~G~~~~~i~ 283 (349)
T 3v64_C 244 GLPHPFAITV-FEDSLYWTDWHTKSINSANKF----TGKNQEIIR 283 (349)
T ss_dssp SCSSEEEEEE-ETTEEEEEETTTTEEEEEETT----TCCSCEEEE
T ss_pred CCCCceEEEE-ECCEEEEecCCCCeEEEEEcc----CCCccEEec
Confidence 3345688999 34444455 567788888743 465555454
No 292
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=87.12 E-value=11 Score=41.23 Aligned_cols=119 Identities=15% Similarity=0.106 Sum_probs=70.4
Q ss_pred CCC-eEEEEECCCcEEEEecccccccc-ccccC-C-CCCeEEEEECCCCCEEEEEcCCcEEEEEcccccCCCCeeeeecC
Q 047036 431 GDG-SIVVGSLDGKIRLYSKTSMRQAK-TAFPG-L-GSPITHVDVTYDGKWILGTTDTYLILICTLFSDKDGKTKTGFSG 506 (634)
Q Consensus 431 ~dG-~IASGS~DGtIRLWD~~t~r~ak-t~L~G-H-~d~ItsVdfSpDGk~LlSS~D~tIrLWD~~~~~~~G~~~~gF~g 506 (634)
.+| .|+++- ++.||.-++.....-+ ..++. . -+.|..|.+||+|++||-..+.+|.+..+- .+. ..
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP----~~~-----~~ 99 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVP----WGY-----SN 99 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECC----TTC-----SC
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEec----Ccc-----cc
Confidence 344 555554 4899988865321111 12332 1 236899999999999999888899999864 221 11
Q ss_pred CCC---CCCCCceeEeecCCCcc--ccCCCcccccccccccccCCCCceEEEE-EcCCeEEEEeChh
Q 047036 507 RMG---NKIPAPRLLKLTPLDSH--LAGTDNKIHGGHFSWVTENGKQERHLVA-TVGKFSVIWDFQQ 567 (634)
Q Consensus 507 h~~---~~~p~pr~L~L~Pe~~~--~~g~~i~Ft~a~Fs~~t~~g~~E~~Ivt-Stg~~viiWdl~~ 567 (634)
..+ ..+.++|..++.|-... .....+-|+|..- ...+||+ ..|+.|.+||+.+
T Consensus 100 ~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~--------~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 100 VEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSY--------RDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBG--------GGCEEEEEETTSCEEEEETTC
T ss_pred CcccccccccceeEEEcCCcccCCCCceeEEEeccccC--------CCCeEEEEecCCEEEEEEccc
Confidence 110 02244567777653210 1112355666532 3457777 7788999999986
No 293
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=87.07 E-value=4.6 Score=45.96 Aligned_cols=161 Identities=9% Similarity=-0.076 Sum_probs=82.2
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEec-cCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKF-EKDGTDITMRDITNDTKSSQLDPSESTFLGLDD 384 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkg-H~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D 384 (634)
.|.++.+.-..++++++.... ++|.+.|+.. +.+..+-. ..... .-+++.|.. +.+.++-...
T Consensus 454 ~P~glavD~~~g~LY~tD~~~------~~I~v~d~dg-~~~~~l~~~~~~~P--~giavDp~~-------g~ly~td~~~ 517 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVL------GTVSVADTKG-VKRKTLFREQGSKP--RAIVVDPVH-------GFMYWTDWGT 517 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTT------SCEEEEBSSS-CCEEEECCCSSCCC--CCEECCSSS-------SCCEECCCSS
T ss_pred CcceEEEEeeCCcEEEEeccC------CeEEEEecCC-CceEEEEeCCCCCc--ceEEEccCC-------CcEEEcccCC
Confidence 455543322455666665543 5899999884 44444422 11111 223677752 2334443333
Q ss_pred -CeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCC-CeEEEE-ECCCcEEEEecccccccccccc-
Q 047036 385 -NRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD-GSIVVG-SLDGKIRLYSKTSMRQAKTAFP- 460 (634)
Q Consensus 385 -~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d-G~IASG-S~DGtIRLWD~~t~r~akt~L~- 460 (634)
++|.+.++..... +.+.. . .. ..-..++++++ ++|+.+ +..+.|+.+|..+.. .+..+.
T Consensus 518 ~~~I~~~~~dG~~~--~~l~~--~---------~l---~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~ 580 (699)
T 1n7d_A 518 PAKIKKGGLNGVDI--YSLVT--E---------NI---QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILED 580 (699)
T ss_dssp SCCEEBCCSSSCCC--CEESC--S---------SC---SSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCC
T ss_pred CCeEEEEeCCCCCe--eEEEe--C---------CC---CCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEec
Confidence 6788877753221 11210 0 00 01135688876 466544 566789999986532 222222
Q ss_pred -CCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeee
Q 047036 461 -GLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGF 504 (634)
Q Consensus 461 -GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF 504 (634)
+......+|++..++ .+++ ...+.|..++.. +|+.+..+
T Consensus 581 ~~~~~~P~glavd~~~-lywtd~~~~~V~~~d~~----~G~~~~~i 621 (699)
T 1n7d_A 581 EKRLAHPFSLAVFEDK-VFWTDIINEAIFSANRL----TGSDVNLL 621 (699)
T ss_dssp SSSCSSCCCCEEETTE-EEEECSTTTCEEEEETT----TEEEEECC
T ss_pred CCcCCCceEeEEECCE-EEEEeCCCCeEEEEEcc----CCCceEEe
Confidence 112233567775552 3334 667889988853 45544444
No 294
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=86.33 E-value=21 Score=37.88 Aligned_cols=150 Identities=13% Similarity=0.216 Sum_probs=84.1
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEec-cCCCcceeEEEEecCCCCCCCCCCC---E-EEEEeC--CCeEE
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKF-EKDGTDITMRDITNDTKSSQLDPSE---S-TFLGLD--DNRLC 388 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkg-H~~~V~I~vvsfsPd~K~~q~~~g~---~-laSGS~--D~tIk 388 (634)
..++|+..... +-|+++|+ +|++++.+.+ +-+.| .+-|.-+.. ++ + ++|.-. +++|+
T Consensus 39 ~~s~ii~t~k~------~gL~Vydl-~G~~l~~~~~g~~nnV-----D~r~~~~l~----g~~~dla~as~R~~~~n~l~ 102 (355)
T 3amr_A 39 QNSKLITTNKK------SGLVVYSL-DGKMLHSYNTGKLNNV-----DIRYDFPLN----GKKVDIAAASNRSEGKNTIE 102 (355)
T ss_dssp GGCEEEEEETT------TEEEEEET-TSCEEEEECCSCEEEE-----EEEEEEEET----TEEEEEEEEEECSTTCCEEE
T ss_pred CccEEEEEcCC------CCEEEEcC-CCcEEEEccCCCcccE-----EEecccccC----CceEeEEEEeCCCCCCCeEE
Confidence 44555544322 57999999 7999999974 33332 444531111 22 2 233333 68999
Q ss_pred EEEc--CCCCceEEecccCCCCccccccccccccCcce--EEEEECC-CC--eEEEEECCCcEEEEeccc---c---ccc
Q 047036 389 QWDM--RDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNF--QCFASTG-DG--SIVVGSLDGKIRLYSKTS---M---RQA 455 (634)
Q Consensus 389 lWD~--R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~f--ssva~s~-dG--~IASGS~DGtIRLWD~~t---~---r~a 455 (634)
++++ .++ .+..+..-..++ +... ... .|+..++ .| ++++...+|.+..|++.. + .+.
T Consensus 103 vf~iDp~~~--~l~~i~~~~~pv-----~t~~---~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~l 172 (355)
T 3amr_A 103 IYAIDGKNG--TLQSMTDPDHPI-----ATAI---NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKK 172 (355)
T ss_dssp EEEECTTTC--CEEECSCTTSCE-----ECCC---SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEE
T ss_pred EEEECCCCC--ceeeccccccCc-----CCCC---CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceE
Confidence 9954 443 245542110011 0000 111 2333366 35 588888999999999832 1 023
Q ss_pred cccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcc
Q 047036 456 KTAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTL 492 (634)
Q Consensus 456 kt~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~ 492 (634)
..+|+ .+..+-++.+.+...+|.. -.+.-|..+|+.
T Consensus 173 VR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 173 VRAFK-MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred EEEec-CCCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 34554 4568899999998878777 555555444543
No 295
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=86.14 E-value=1.9 Score=48.84 Aligned_cols=131 Identities=16% Similarity=0.169 Sum_probs=80.0
Q ss_pred EEECCCC-e-EEEEECCCcEEEEecccccc-----------ccccccCCCCCeEEEEECCCCCEEEEE--cCCcEEEEEc
Q 047036 427 FASTGDG-S-IVVGSLDGKIRLYSKTSMRQ-----------AKTAFPGLGSPITHVDVTYDGKWILGT--TDTYLILICT 491 (634)
Q Consensus 427 va~s~dG-~-IASGS~DGtIRLWD~~t~r~-----------akt~L~GH~d~ItsVdfSpDGk~LlSS--~D~tIrLWD~ 491 (634)
+-++||| + +++|-.+.++-++|...... ++..-+..+-.-.+.+|.++| ...+| .|+.|.-|++
T Consensus 328 v~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 328 CNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp EEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTEEEEEEH
T ss_pred eeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecceEEEEec
Confidence 4568999 5 56677899999999874311 111112355567999999999 55554 5999999997
Q ss_pred ccccCCCCeeeeecCCCCCCCCCceeE--eecCCCcccc--------CC----Ccccccccccccc-cCCCCceEEEEEc
Q 047036 492 LFSDKDGKTKTGFSGRMGNKIPAPRLL--KLTPLDSHLA--------GT----DNKIHGGHFSWVT-ENGKQERHLVATV 556 (634)
Q Consensus 492 ~~~~~~G~~~~gF~gh~~~~~p~pr~L--~L~Pe~~~~~--------g~----~i~Ft~a~Fs~~t-~~g~~E~~IvtSt 556 (634)
. +.+..|.|-- ..|.-.+| +-.|+|.+.. |+ -.+|++++|-++- .--.++++|=-|.
T Consensus 407 ~------~a~~~~~g~~--~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsG 478 (638)
T 3sbq_A 407 E------EAVRAYKGEK--VNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISG 478 (638)
T ss_dssp H------HHHHHHTTCC--CCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSS
T ss_pred c------HHHHHhcCcc--CCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCC
Confidence 4 1223344321 11222222 2236665331 11 2579999998741 1123456776688
Q ss_pred CCeEEEEeCh
Q 047036 557 GKFSVIWDFQ 566 (634)
Q Consensus 557 g~~viiWdl~ 566 (634)
+++..|-|.-
T Consensus 479 dkM~lv~D~P 488 (638)
T 3sbq_A 479 DEMKLVHDGP 488 (638)
T ss_dssp SSCEEEEEEE
T ss_pred CceEEEecCC
Confidence 8998888873
No 296
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=85.62 E-value=46 Score=36.41 Aligned_cols=162 Identities=10% Similarity=0.131 Sum_probs=96.4
Q ss_pred cEEEeee-CCCeEEEecCeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCCcE
Q 047036 257 QSLTLGA-LDNSFLVSDLGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGV 335 (634)
Q Consensus 257 ~~LavG~-~D~sfvv~G~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TI 335 (634)
+.+.+.- +.+-|++.|+.|+.-...+.. .++ .+++. ....|.....++.++++++|...+. .+|
T Consensus 24 R~~~~~~n~t~i~~a~~n~iR~~~i~~~~-~Yk--~L~~~-----~~i~f~~i~qlvlSpsG~lLAl~g~-------~~V 88 (452)
T 3pbp_A 24 RYIFSSQNGTRIVFIQDNIIRWYNVLTDS-LYH--SLNFS-----RHLVLDDTFHVISSTSGDLLCLFND-------NEI 88 (452)
T ss_dssp EEEEEETTTTEEEEEETTEEEEEETTTCS-SCE--EEECT-----TTCCCCTTCEEEECTTSSEEEEECS-------SEE
T ss_pred cEEEEEcCCCEEEEEECCEEEEEECCCCC-cce--EEecC-----cccccCceeEEEECCCCCEEEEecC-------CeE
Confidence 3444555 444677788888865544332 333 22222 1124534455778888888887765 579
Q ss_pred EEEeCCCCc------------EEEEEecc------CCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCC-
Q 047036 336 QQLDIETGK------------IVTEWKFE------KDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRS- 396 (634)
Q Consensus 336 rlWDleTGK------------~V~~lkgH------~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~- 396 (634)
.+..+..|. .++.|.-. ... |.-+-|+|-+.. +..|++=-.|++||+||+....
T Consensus 89 ~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~--I~qVlWHPl~~~-----ds~LVVLtsD~~Ir~yDl~~s~~ 161 (452)
T 3pbp_A 89 FVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSS--IKKVLFHPKSYR-----DSCIVVLKEDDTITMFDILNSQE 161 (452)
T ss_dssp EEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCC--EEEEEECTTBGG-----GCEEEEEETTSCEEEEETTCTTS
T ss_pred EEEEecCccccCcccccccccceeEEEcCCcccCCCCc--eeEEEeccccCC-----CCeEEEEecCCEEEEEEcccCCC
Confidence 999887442 23455533 222 445689997543 4688888999999999998532
Q ss_pred ceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEE--CCCcEEEE
Q 047036 397 GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGS--LDGKIRLY 447 (634)
Q Consensus 397 ~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS--~DGtIRLW 447 (634)
.+. .|..... .. |-+ .....+.++||.++| .|.+.+ ..|.|.-.
T Consensus 162 ~P~-~L~k~~~-~f----g~d-~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 162 KPI-VLNKPNN-SF----GLD-ARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CCE-EESCCCS-EE----ESC-SSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CCc-chhcccc-cc----CCC-cccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 232 3421100 00 100 122567899999988 566655 88998643
No 297
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=84.11 E-value=83 Score=38.12 Aligned_cols=130 Identities=16% Similarity=0.221 Sum_probs=78.0
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
+.||+.+...++.+.+|+...+. .|...+.+ +.+++.++ .+.|....+..+ .+ ..+.
T Consensus 492 ~~Irli~~~~~~~~~~w~~p~~~-~I~~As~n----------~~~vvva~-g~~l~~fel~~~-~L-~~~~--------- 548 (1158)
T 3ei3_A 492 ASVRLVSQEPKALVSEWKEPQAK-NISVASCN----------SSQVVVAV-GRALYYLQIHPQ-EL-RQIS--------- 548 (1158)
T ss_dssp SCEEEEESSSCCEEEEECCTTCC-CCCEEEEC----------SSEEEEEE-TTEEEEEEEETT-EE-EEEE---------
T ss_pred CEEEEEECCCCeEEEEEECCCCC-EEEEEEeC----------CCEEEEEE-CCEEEEEEeeCC-ce-eeec---------
Confidence 46999999888899999865542 13332333 24677775 677888776543 22 2211
Q ss_pred ccccccccCcceEEEEECCC-------CeEEEEEC-CCcEEEEeccccccc-cccccCCCCCeEEEEECC--CCCEEEE-
Q 047036 413 TQGHQFSRGTNFQCFASTGD-------GSIVVGSL-DGKIRLYSKTSMRQA-KTAFPGLGSPITHVDVTY--DGKWILG- 480 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~d-------G~IASGS~-DGtIRLWD~~t~r~a-kt~L~GH~d~ItsVdfSp--DGk~LlS- 480 (634)
. ..-...++|+++.+- .++|+|.. |++|||+.+.+.+.. ...|++ .....+|.+.. ..-||..
T Consensus 549 --~--~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~ig 623 (1158)
T 3ei3_A 549 --H--TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG-EIIPRSILMTTFESSHYLLCA 623 (1158)
T ss_dssp --E--EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEE
T ss_pred --c--cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEE
Confidence 0 012335788888642 27999997 999999998765311 123432 23455655542 2346666
Q ss_pred EcCCcEEEEE
Q 047036 481 TTDTYLILIC 490 (634)
Q Consensus 481 S~D~tIrLWD 490 (634)
-.|+.+.-+.
T Consensus 624 l~dG~l~~~~ 633 (1158)
T 3ei3_A 624 LGDGALFYFG 633 (1158)
T ss_dssp ETTSEEEEEE
T ss_pred eCCCeEEEEE
Confidence 5577765554
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=83.05 E-value=65 Score=36.09 Aligned_cols=133 Identities=11% Similarity=0.047 Sum_probs=76.8
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
+.|+.+++..+.....+....... .-+++.+.+ +.+.++-...++|.+.|+..... ..+.. .
T Consensus 59 ~~I~r~~~~g~~~~~v~~~g~~~P--~GlAvD~~~-------~~LY~tD~~~~~I~v~~~dG~~~--~~l~~--~----- 120 (628)
T 4a0p_A 59 KTISRAFMNGSALEHVVEFGLDYP--EGMAVDWLG-------KNLYWADTGTNRIEVSKLDGQHR--QVLVW--K----- 120 (628)
T ss_dssp TEEEEEETTSCSCEEEECSSCSCC--CEEEEETTT-------TEEEEEETTTTEEEEEETTSTTC--EEEEC--S-----
T ss_pred CeEEEEECCCCCcEEEEeCCCCCc--ceEEEEeCC-------CEEEEEECCCCEEEEEecCCCcE--EEEEe--C-----
Confidence 689999987543333232211111 123666541 34555666678899988865422 22210 0
Q ss_pred ccccccccCcceEEEEECC-CCeEEEEEC--CCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEE-E-EcCCcEE
Q 047036 413 TQGHQFSRGTNFQCFASTG-DGSIVVGSL--DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWIL-G-TTDTYLI 487 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~-dG~IASGS~--DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~Ll-S-S~D~tIr 487 (634)
. . ..-..+++.| .|+|..... .+.|...++.+. .....+.+ ....++|+|+++++.|. + +..+.|.
T Consensus 121 ----~--l-~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~-~~~~l~~~-~~~P~GlalD~~~~~LY~aD~~~~~I~ 191 (628)
T 4a0p_A 121 ----D--L-DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS-ERTTLVPN-VGRANGLTIDYAKRRLYWTDLDTNLIE 191 (628)
T ss_dssp ----S--C-CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred ----C--C-CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC-ceEEEECC-CCCcceEEEccccCEEEEEECCCCEEE
Confidence 0 0 1125778876 677766542 567887877653 23333333 34568999999877665 5 6678888
Q ss_pred EEEcc
Q 047036 488 LICTL 492 (634)
Q Consensus 488 LWD~~ 492 (634)
..|+.
T Consensus 192 ~~d~d 196 (628)
T 4a0p_A 192 SSNML 196 (628)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 88863
No 299
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=81.92 E-value=53 Score=34.25 Aligned_cols=173 Identities=11% Similarity=-0.014 Sum_probs=93.2
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe-C-
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL-D- 383 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS-~- 383 (634)
.|.++.+....++++++.... +.|.+.|+..+.....+...-... .-+++.|. +..|+-.- .
T Consensus 160 ~p~glavD~~~~~lY~~d~~~------~~I~~~~~~g~~~~~l~~~~~~~P--~~iavdp~--------~g~ly~td~~~ 223 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVL------GTVSVADTKGVKRKTLFRENGSKP--RAIVVDPV--------HGFMYWTDWGT 223 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTT------TEEEEECTTTCSEEEEEECSSCCE--EEEEEETT--------TTEEEEEECSS
T ss_pred CcccEEEEecCCceEEEECCC------CeEEEEeCCCCceEEEEeCCCCCc--ceEEEecc--------cCeEEEEeCCC
Confidence 566644433466677776654 589999998444333333222221 23477875 23444433 2
Q ss_pred CCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCC-CeEEEE-ECCCcEEEEeccccccccccccC
Q 047036 384 DNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD-GSIVVG-SLDGKIRLYSKTSMRQAKTAFPG 461 (634)
Q Consensus 384 D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d-G~IASG-S~DGtIRLWD~~t~r~akt~L~G 461 (634)
...|.+.++..... ..+.. .. . ..-..++++++ ++|..+ +..+.|+.+|..+.. ....+.+
T Consensus 224 ~~~I~~~~~dG~~~--~~~~~-~~----------l---~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~ 286 (400)
T 3p5b_L 224 PAKIKKGGLNGVDI--YSLVT-EN----------I---QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILED 286 (400)
T ss_dssp SCCEEEEETTSCSC--EEEEC-SS----------C---SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-CEEEEEC
T ss_pred CCEEEEEeCCCCcc--EEEEE-CC----------C---CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc-cEEEEeC
Confidence 37888888864322 22210 00 0 11256788865 577665 456789999987632 2232222
Q ss_pred --CCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeecCCCCCCCCCceeEee
Q 047036 462 --LGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKL 520 (634)
Q Consensus 462 --H~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L 520 (634)
.-....+|++..+ ....+ ...+.|..+|.. +|+.+..+...+ +.|.-+.+
T Consensus 287 ~~~l~~P~gl~v~~~-~lywtd~~~~~V~~~~~~----~G~~~~~i~~~~----~~p~~i~v 339 (400)
T 3p5b_L 287 EKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL----TGSDVNLLAENL----LSPEDMVL 339 (400)
T ss_dssp SSTTSSEEEEEEETT-EEEEEESSSCSEEEEESS----SCCCCEEEECSC----SCEEEEEE
T ss_pred CCCCCCCEEEEEeCC-EEEEecCCCCeEEEEEcC----CCCceEEEecCC----CCCceEEE
Confidence 2233468888333 33344 667888888853 566555554322 34555544
No 300
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=80.92 E-value=53 Score=35.20 Aligned_cols=31 Identities=13% Similarity=0.082 Sum_probs=21.3
Q ss_pred CCCCCeEEEEECCCCCEEEE--EcCCcEEEEEcc
Q 047036 461 GLGSPITHVDVTYDGKWILG--TTDTYLILICTL 492 (634)
Q Consensus 461 GH~d~ItsVdfSpDGk~LlS--S~D~tIrLWD~~ 492 (634)
||.. ..+|+|.|+|+..++ +.+..-.|.-+.
T Consensus 226 G~RN-p~gla~dp~G~L~~~d~g~~~~dein~i~ 258 (454)
T 1cru_A 226 GHRN-PQGLAFTPNGKLLQSEQGPNSDDEINLIV 258 (454)
T ss_dssp CCSE-EEEEEECTTSCEEEEEECSSSCEEEEECC
T ss_pred CCCC-cceEEECCCCCEEEEecCCCCCeEEEEec
Confidence 5554 579999999987777 455555555544
No 301
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=80.15 E-value=11 Score=41.84 Aligned_cols=102 Identities=14% Similarity=0.039 Sum_probs=59.3
Q ss_pred CCEEEEEeCCC-----------eEEEEEcCCCCc-eEEecccCCCCccccccccccccCcceEEEEECCCCe-EEEEE-C
Q 047036 375 SESTFLGLDDN-----------RLCQWDMRDRSG-IVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGS-IVVGS-L 440 (634)
Q Consensus 375 g~~laSGS~D~-----------tIklWD~R~~~~-~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~-IASGS-~ 440 (634)
+.+++.|+.++ .+.+||+.+..- .+..+.. .+.....++++..+|+ +++|+ .
T Consensus 198 g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~--------------~~~~~~~~~~~~~~g~lyv~GG~~ 263 (656)
T 1k3i_A 198 GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVT--------------KHDMFCPGISMDGNGQIVVTGGND 263 (656)
T ss_dssp TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEEC--------------SCCCSSCEEEECTTSCEEEECSSS
T ss_pred CEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCC--------------CCCCccccccCCCCCCEEEeCCCC
Confidence 56788887543 689999987541 1111110 0111123456677884 56666 4
Q ss_pred CCcEEEEecccccccc--ccccCCCCCeEEEEECCCCCEEEE-E-cC-----CcEEEEEcc
Q 047036 441 DGKIRLYSKTSMRQAK--TAFPGLGSPITHVDVTYDGKWILG-T-TD-----TYLILICTL 492 (634)
Q Consensus 441 DGtIRLWD~~t~r~ak--t~L~GH~d~ItsVdfSpDGk~LlS-S-~D-----~tIrLWD~~ 492 (634)
++++++||..+.+ -. ..++... .=.++++.+||+.++. + .+ +.+.+||..
T Consensus 264 ~~~v~~yd~~t~~-W~~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 264 AKKTSLYDSSSDS-WIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp TTCEEEEEGGGTE-EEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred CCceEEecCcCCc-eeECCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 5689999987632 11 1222111 1135667789999888 6 34 678889864
No 302
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=79.25 E-value=32 Score=36.00 Aligned_cols=130 Identities=17% Similarity=0.158 Sum_probs=65.6
Q ss_pred CcEEEEeCCCCcEE--EEE----eccCCCcceeEEEEecCCCCCCCCCCCEEEEE---eCCCeEEEEEcCCCC-------
Q 047036 333 PGVQQLDIETGKIV--TEW----KFEKDGTDITMRDITNDTKSSQLDPSESTFLG---LDDNRLCQWDMRDRS------- 396 (634)
Q Consensus 333 ~TIrlWDleTGK~V--~~l----kgH~~~V~I~vvsfsPd~K~~q~~~g~~laSG---S~D~tIklWD~R~~~------- 396 (634)
+.|++++..+|+.. ..+ ....... .-++|+|+ |++ +..|+.. ..++.|.+|.+....
T Consensus 53 G~I~~v~~~~g~~~~v~~~~~v~~~g~~Gl--lGia~~Pd--f~~---~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~ 125 (347)
T 3das_A 53 ATITRVDAKTGRKTELGEVPGVSPSGEGGL--LGIALSPD--YAS---DHMVYAYFTSASDNRIVRMLYDEKKPSGEQLG 125 (347)
T ss_dssp CEEEEECTTTCCEEEEEECTTCCCBTTBSE--EEEEECTT--HHH---HCEEEEEEECSSSEEEEEEEBCTTSCTTCCBC
T ss_pred CEEEEEECCCCcEeeecccCceeecCCCCc--eeeEeccc--ccc---CCEEEEEEecCCCCEEEEEEeCCCCcccccCC
Confidence 68999988777642 221 1112222 23488886 221 2455543 356788888765411
Q ss_pred --c-eEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEE--------------CCCcEEEEeccccc------
Q 047036 397 --G-IVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGS--------------LDGKIRLYSKTSMR------ 453 (634)
Q Consensus 397 --~-~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS--------------~DGtIRLWD~~t~r------ 453 (634)
. ++..+.. ...| .-..++|.++|+|.++- .-|.|.=.+..+.-
T Consensus 126 ~~~~i~~~~p~--------~~~H------~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 126 APDTVFRGIPK--------GVIH------NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp CCEEEEEEECC--------CSSC------CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred CcEEEEEcCCC--------CCCc------cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 1 1111210 0011 12457889999554442 23455444544310
Q ss_pred -cccccccCCCCCeEEEEECCCCCEEEE--EcCC
Q 047036 454 -QAKTAFPGLGSPITHVDVTYDGKWILG--TTDT 484 (634)
Q Consensus 454 -~akt~L~GH~d~ItsVdfSpDGk~LlS--S~D~ 484 (634)
....--.||..| .+|+|.|+|+..++ +.|.
T Consensus 192 ~~~~i~a~G~RNp-~Gla~dp~G~L~~~d~g~~~ 224 (347)
T 3das_A 192 PGSPVYSYGHRNV-QGLAWDDKQRLFASEFGQDT 224 (347)
T ss_dssp TTCCEEEBCCSBC-CEEEECTTCCEEEEECCSSS
T ss_pred CCCeEEeeCCCCc-ceEEECCCCCEEEEecCCCC
Confidence 000111266554 68999999987777 4454
No 303
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=78.91 E-value=43 Score=33.56 Aligned_cols=105 Identities=10% Similarity=-0.018 Sum_probs=56.7
Q ss_pred EEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEE
Q 047036 360 MRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGS 439 (634)
Q Consensus 360 vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS 439 (634)
.+-|.|+ |.+-++ .|+.|+.|++-+.++. ...+- +.+. + +. --..|.++++.|+|.|....
T Consensus 92 a~~fD~~--------G~LYav--~dG~iyr~~pP~~~~~--~Wl~~-a~~v----g-~~-gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 92 FLFFDPN--------GYLYAV--SKDKLYKASPPQSDTD--NWIAR-ATEV----G-SG-GWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp EEEECTT--------SCEEEE--ETTEEEEESCCCSTTC--CHHHH-SEEE----E-CS-SGGGEEEEEECTTSCEEEEE
T ss_pred EEEECCC--------CCEEEe--CCCEEEEeCCCcCCCC--ceecc-ccEe----c-cC-CCCceEEEEECCCceEEEEe
Confidence 3478887 444444 6699999997443220 10000 0000 0 00 01357899999999887777
Q ss_pred CCCcEEEEecccccc----cc-cccc-CCCCCeEEEEECCCCCEEEEEcCCc
Q 047036 440 LDGKIRLYSKTSMRQ----AK-TAFP-GLGSPITHVDVTYDGKWILGTTDTY 485 (634)
Q Consensus 440 ~DGtIRLWD~~t~r~----ak-t~L~-GH~d~ItsVdfSpDGk~LlSS~D~t 485 (634)
|+.+.-+-.-+... .. +++- +.-.--+.|.|+|+|...+.+ ++.
T Consensus 153 -dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~-~g~ 202 (236)
T 1tl2_A 153 -GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ-GGK 202 (236)
T ss_dssp -TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE-TTE
T ss_pred -CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe-CCe
Confidence 88864333221100 01 1111 233345668899999887777 653
No 304
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=76.44 E-value=75 Score=35.07 Aligned_cols=150 Identities=17% Similarity=0.281 Sum_probs=90.6
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCC
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDN 385 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~ 385 (634)
+.+.+++ ++.++.|..=.. ++|.+.|+++-+.+..+..+.+-| .+ .-+++. .|+. -.+.
T Consensus 67 ~AdsAIM-nP~~~iiALrag-------~~lQiFnle~K~klks~~~~e~Vv-fW-kWis~~----------~l~l-VT~t 125 (494)
T 1bpo_A 67 SADSAIM-NPASKVIALKAG-------KTLQIFNIEMKSKMKAHTMTDDVT-FW-KWISLN----------TVAL-VTDN 125 (494)
T ss_dssp CCSEEEE-CSSSSCEEEEET-------TEEEEEETTTTEEEEEEECSSCCC-EE-EEEETT----------EEEE-ECSS
T ss_pred ccceeee-CCCCcEEEEecC-------CeEEEEchHHhhhhcceecCCCce-EE-EecCCC----------eEEE-EcCC
Confidence 3444443 445555554432 689999999999999988877644 23 244553 4444 3478
Q ss_pred eEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-e-EEEEE------CCCcEEEEeccccccccc
Q 047036 386 RLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-S-IVVGS------LDGKIRLYSKTSMRQAKT 457 (634)
Q Consensus 386 tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~-IASGS------~DGtIRLWD~~t~r~akt 457 (634)
+|+-|++.....+++.+..|.+- .+.++-.-.++++. . +++|= ..|.|.||.... +...
T Consensus 126 aVyHWsi~~~s~P~kvFdR~~~L-----------~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ 192 (494)
T 1bpo_A 126 AVYHWSMEGESQPVKMFDRHSSL-----------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQ 192 (494)
T ss_dssp EEEEEESSSSCCCEEEEECCGGG-----------TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT--CCEE
T ss_pred eeEEecccCCCCchhheecchhc-----------ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc--cccc
Confidence 99999997644566666655431 12334444455555 2 33332 458899999764 3567
Q ss_pred cccCCCCCeEEEEECCCCC----EEEE-EcC----CcEEEEEc
Q 047036 458 AFPGLGSPITHVDVTYDGK----WILG-TTD----TYLILICT 491 (634)
Q Consensus 458 ~L~GH~d~ItsVdfSpDGk----~LlS-S~D----~tIrLWD~ 491 (634)
.+.||...- ..+-.+|. .|.+ ... +.|+|.++
T Consensus 193 ~ieGhaa~F--~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei 233 (494)
T 1bpo_A 193 PIEGHAASF--AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEV 233 (494)
T ss_dssp EECCSEEEE--EEEECTTCSSEEEEEEEEECSTTCCEEEEEEC
T ss_pred hheeeeeee--EEEecCCCCCCceEEEEEEecCCCcEEEEEEc
Confidence 899997644 34444443 3544 333 56777775
No 305
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=75.73 E-value=71 Score=32.23 Aligned_cols=160 Identities=8% Similarity=-0.026 Sum_probs=87.9
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEe-ccCCCcceeEEEEecCCCCCCCCCCCEEEEEe--
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWK-FEKDGTDITMRDITNDTKSSQLDPSESTFLGL-- 382 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lk-gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS-- 382 (634)
.|.++.+.-..++++++.... +.|.+.|+. |+..+.+- ..-.. + .-+++.|. +..++-..
T Consensus 80 ~p~glavd~~~g~ly~~d~~~------~~I~~~~~d-G~~~~~l~~~~~~~-P-~giavdp~--------~g~ly~td~~ 142 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSET------NRIEVSNLD-GSLRKVLFWQELDQ-P-RAIALDPS--------SGFMYWTDWG 142 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTT------TEEEEEETT-SCSCEEEECSSCSS-E-EEEEEEGG--------GTEEEEEECS
T ss_pred CccEEEEEcCCCeEEEEECCC------CEEEEEECC-CCcEEEEEeCCCCC-c-cEEEEeCC--------CCEEEEEecC
Confidence 455544433456666666553 589999987 44333332 22222 1 23477775 23455443
Q ss_pred CCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCC-CeEEEE-ECCCcEEEEecccccccccccc
Q 047036 383 DDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD-GSIVVG-SLDGKIRLYSKTSMRQAKTAFP 460 (634)
Q Consensus 383 ~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d-G~IASG-S~DGtIRLWD~~t~r~akt~L~ 460 (634)
....|.+.++..... ..+.. . .. ..-..++++++ +.|..+ +..+.|+.+|..+. .....+.
T Consensus 143 ~~~~I~r~~~dG~~~--~~~~~--~---------~l---~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~ 205 (318)
T 3sov_A 143 EVPKIERAGMDGSSR--FIIIN--S---------EI---YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT-NRQAVVK 205 (318)
T ss_dssp SSCEEEEEETTSCSC--EEEEC--S---------SC---SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEC
T ss_pred CCCEEEEEEcCCCCe--EEEEE--C---------CC---CCccEEEEeccCCEEEEEECCCCEEEEEcCCCC-ceEEEec
Confidence 357888888864321 22210 0 00 01256788874 566555 56788999998753 2333334
Q ss_pred CCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeee
Q 047036 461 GLGSPITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGF 504 (634)
Q Consensus 461 GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF 504 (634)
+......+|++..+ ....+ ...+.|..++.. +|+.+..+
T Consensus 206 ~~~~~P~glav~~~-~lywtd~~~~~V~~~~~~----~G~~~~~i 245 (318)
T 3sov_A 206 GSLPHPFALTLFED-ILYWTDWSTHSILACNKY----TGEGLREI 245 (318)
T ss_dssp SCCSCEEEEEEETT-EEEEEETTTTEEEEEETT----TCCSCEEE
T ss_pred CCCCCceEEEEeCC-EEEEEecCCCeEEEEECC----CCCceEEE
Confidence 33345678888644 33334 566788888853 45544444
No 306
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=74.45 E-value=20 Score=36.37 Aligned_cols=127 Identities=10% Similarity=0.097 Sum_probs=71.5
Q ss_pred ceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeC-C------------
Q 047036 318 NMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLD-D------------ 384 (634)
Q Consensus 318 ~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~-D------------ 384 (634)
.+.+++..|+ ..|+.+++. |..++.+.... +.-|+|+ +..|+-... +
T Consensus 27 ~iy~~n~~d~-----~~ly~~~~d-g~~~~~l~~~~------~~~i~~~--------g~~Iyy~~~~~~~~~~~~~~~~n 86 (302)
T 3s25_A 27 EVFFSNTNDN-----GRLYAMNID-GSNIHKLSNDT------AMYINAD--------KNYVYYVRNNNQKITSQTFFSYD 86 (302)
T ss_dssp EEEEEEGGGT-----TEEEEEETT-SCSCEEEEEEE------EEEEEEC--------SSEEEEEEECC------CCSSCC
T ss_pred EEEEEeCCCC-----ceEEEEcCC-CCCCEEccCCc------eeeEEEc--------CCEEEEEECCCCcccccceeccC
Confidence 3445555443 689999986 55566665432 2366777 455554443 2
Q ss_pred -CeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEEEE----CCCcEEEEecccccccccc
Q 047036 385 -NRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGS----LDGKIRLYSKTSMRQAKTA 458 (634)
Q Consensus 385 -~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS----~DGtIRLWD~~t~r~akt~ 458 (634)
..|++.++..... +.|. . ..+.+++++| +|+-.. ....|..-++.+. .++.
T Consensus 87 ~~~Iy~i~~dg~~~--~~l~-----------------~--~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs--~~~~ 143 (302)
T 3s25_A 87 RNSLCRIKRNGHGS--TVLD-----------------P--DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGE--EKKK 143 (302)
T ss_dssp SEEEEEEETTSCCC--EEEE-----------------C--SCEEEEEEETTEEEEEEESSSSCEEEEEEETTSC--CCEE
T ss_pred CCeEEEEeCCCCcc--eEee-----------------c--CCccEEEEeCCEEEEEeecCCCCceEEEEECCCC--CeEE
Confidence 4788888876532 2221 0 1122344455 776554 3445555565542 3344
Q ss_pred ccCCCCCeEEEEECCCCCEEEEEc--CCcEEEEEc
Q 047036 459 FPGLGSPITHVDVTYDGKWILGTT--DTYLILICT 491 (634)
Q Consensus 459 L~GH~d~ItsVdfSpDGk~LlSS~--D~tIrLWD~ 491 (634)
|..+.. ++|+|+|++|.=+. ..+|...++
T Consensus 144 lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l 174 (302)
T 3s25_A 144 IKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDT 174 (302)
T ss_dssp EESSCC----CCSEEETTEEEEECTTTCCEEEEET
T ss_pred EeCCCc----eEeeEECCEEEEEeCCCceEEEEEC
Confidence 544432 56799999998543 466766664
No 307
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=74.35 E-value=7.2 Score=39.17 Aligned_cols=106 Identities=11% Similarity=0.069 Sum_probs=63.0
Q ss_pred eEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEE
Q 047036 359 TMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVG 438 (634)
Q Consensus 359 ~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASG 438 (634)
.-++|+|+ +. |+.. .++.|...++.+..+ +...+....| |.. -.+ .|.++.|.++|.|...
T Consensus 44 ~~laf~P~--------G~-LYaV-~~G~Ly~~~~~t~~~--~~W~~s~t~I-----G~~-Gw~-~F~a~~fD~~G~LYav 104 (236)
T 1tl2_A 44 KFLFLSPG--------GE-LYGV-LNDKIYKGTPPTHDN--DNWMGRAKKI-----GNG-GWN-QFQFLFFDPNGYLYAV 104 (236)
T ss_dssp SEEEECTT--------SC-EEEE-ETTEEEEESCCCSTT--CCHHHHCEEE-----ECS-CGG-GCSEEEECTTSCEEEE
T ss_pred eeEEECCC--------cc-EEEE-eCCeEEEECCCCCCc--ccccccccEe-----ccc-ccc-cceEEEECCCCCEEEe
Confidence 34699997 44 5544 788899989865322 1111100000 000 011 2788999999976666
Q ss_pred ECCCcEEEEecccccccc------ccccCCC-CCeEEEEECCCCCEEEEEcCCcE
Q 047036 439 SLDGKIRLYSKTSMRQAK------TAFPGLG-SPITHVDVTYDGKWILGTTDTYL 486 (634)
Q Consensus 439 S~DGtIRLWD~~t~r~ak------t~L~GH~-d~ItsVdfSpDGk~LlSS~D~tI 486 (634)
.||.|.-++..+.. .. +.+-.++ ..+..|.|.|+|..-+.+ |+.+
T Consensus 105 -~dG~iyr~~pP~~~-~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~l 156 (236)
T 1tl2_A 105 -SKDKLYKASPPQSD-TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQF 156 (236)
T ss_dssp -ETTEEEEESCCCST-TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEE
T ss_pred -CCCEEEEeCCCcCC-CCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcE
Confidence 56999888864311 11 1111111 467999999999977778 8774
No 308
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=72.74 E-value=29 Score=31.12 Aligned_cols=90 Identities=21% Similarity=0.400 Sum_probs=58.1
Q ss_pred ceeEEEEecCCCCCceEEeecccc-ceeeeeeccCCCCCCCCCchhhhccCccccceEEEE-ecce--eeeeeccccCcc
Q 047036 73 PVKLYLHIGGNTPKAKWVISDKLT-SYSFVRTNKINGGNDSDDDEEESEKGVLGDGFWVLK-VGSK--VRAKVSTEMQLK 148 (634)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~-~g~~--~~~~v~~~~~~~ 148 (634)
.+.+|.+ =+..+.+|+++.+.+ .-+|++- .. +-.|-+.- .+++ +...|.++|.+.
T Consensus 10 rA~V~~~--D~~tk~~W~p~g~~~~~V~~~~d-----------------~~--~~~yRIv~~~~~~vv~n~~i~~~l~y~ 68 (120)
T 1ddw_A 10 RAHVFQI--DPNTKKNWVPTSKHAVTVSYFYD-----------------ST--RNVYRIISLDGSKAIINSTITPNMTFT 68 (120)
T ss_dssp EEEEEEE--CTTTSCSEEESCSSCEEEEEEEE-----------------TT--TTEEEEEEEETTEEEEEEECCTTCCCE
T ss_pred EEEEEEE--cCCCCCceEeCCCCceEEEEEEc-----------------CC--CCEEEEEEccCCEEEEeCEecCCcEEe
Confidence 3667776 233445899966554 3356661 11 11243332 2334 899999999875
Q ss_pred cccccceEEEE---e-C--cEEEEEcCChHHHHHHHHHHHHhHhh
Q 047036 149 MFGDQRRIDFV---D-K--GVWALKFFSDSEYRKFVTEFQDRLFE 187 (634)
Q Consensus 149 ~~~~~~~~~f~---~-~--~~w~lkF~~~~~~~~F~~~~~~~l~e 187 (634)
.-+-.|. . . ..|-|.|.+.++...|...+..|+=.
T Consensus 69 ----~a~p~FhqW~d~~~~~~~GLnF~s~~eA~~F~~~~~~~~~~ 109 (120)
T 1ddw_A 69 ----KTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEA 109 (120)
T ss_dssp ----ECSSSEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ----eCCccccEEEcCCCcEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 2333343 2 2 59999999999999999999988743
No 309
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=71.52 E-value=2.5 Score=44.40 Aligned_cols=144 Identities=14% Similarity=0.138 Sum_probs=69.4
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCC-CCCCCC-------CCCEEEEEeCCCeEEEEEcCCCCceEEeccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDT-KSSQLD-------PSESTFLGLDDNRLCQWDMRDRSGIVQNMVK 404 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~-K~~q~~-------~g~~laSGS~D~tIklWD~R~~~~~Vq~l~g 404 (634)
+.|+.+|.++|.....+....- | ..+|-. ....+- .+..+++|+.++++...|+++++. +..+..
T Consensus 67 G~l~a~~~~~G~~~~~~~~~~l-v-----~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~-~W~~~~ 139 (339)
T 2be1_A 67 GNIYYFNAHQGLQKLPLSIRQL-V-----STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI-ISAFGP 139 (339)
T ss_dssp TEEEEEETTTEEEEEEEEHHHH-H-----TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE-EEEEST
T ss_pred CEEEEEECCCCcEEeeeccccc-e-----eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE-EEEEec
Confidence 7899999999965544433210 1 111100 000000 146899999999999999999753 444421
Q ss_pred CCCCccccccccccccCcceEEEEE------CCCCeEEEEECCCcEEEEeccccccccccccCCCC-----Ce-EEEEEC
Q 047036 405 GDSPVLHWTQGHQFSRGTNFQCFAS------TGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGS-----PI-THVDVT 472 (634)
Q Consensus 405 h~s~V~~~~~g~~y~~~~~fssva~------s~dG~IASGS~DGtIRLWD~~t~r~akt~L~GH~d-----~I-tsVdfS 472 (634)
. .+. ++ +.. ..-.|... ..++.|+.|+.+..|.+.+. +++.-...+..... ++ .+-.++
T Consensus 140 ~-~~~-----~~-~~~-~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~~-sG~~W~~~~s~~~~~~~~~~~~~~~~~s 210 (339)
T 2be1_A 140 G-SKN-----GY-FGS-QSVDCSPEEKIKLQECENMIVIGKTIFELGIHSY-DGASYNVTYSTWQQNVLDVPLALQNTFS 210 (339)
T ss_dssp T-CBC-----C----------------------CCEEEEEEEEEECEECCT-TSCCCCCEEEEEECCTTTHHHHTTCSSC
T ss_pred C-CCc-----cc-ccc-cccccccccccccccCCCeEEEecceEEEEEECC-CCCeEEEecccccccccccccccccccc
Confidence 1 000 00 000 00011111 12346777887777777552 22211111110000 00 011124
Q ss_pred CCCCEEEEEcCCcEEEEEcc
Q 047036 473 YDGKWILGTTDTYLILICTL 492 (634)
Q Consensus 473 pDGk~LlSS~D~tIrLWD~~ 492 (634)
.||++++++.|+.|.-.|..
T Consensus 211 ~Dg~~~~~~~dg~v~A~d~~ 230 (339)
T 2be1_A 211 KDGMCIAPFRDKSLLASDLD 230 (339)
T ss_dssp SSSCCEEEETTTEEEEECST
T ss_pred cCCcEEEECCCCEEEEEECC
Confidence 56888777888888888864
No 310
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=71.10 E-value=1e+02 Score=32.25 Aligned_cols=145 Identities=11% Similarity=0.137 Sum_probs=79.1
Q ss_pred cccCcceeeEEeC-Cc--ceEEecCCCCCCCCCCcEEEEeCCCC----cEEEEEeccCCCcceeEEEEecCCCCCCCCCC
Q 047036 303 SNSTPKKALLMRG-ET--NMMLMSPLKDGKPQAPGVQQLDIETG----KIVTEWKFEKDGTDITMRDITNDTKSSQLDPS 375 (634)
Q Consensus 303 ~~fsP~~~mL~~~-D~--~mllsss~d~~~~~~~TIrlWDleTG----K~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g 375 (634)
..|.|.+.-++.. ++ .+++.+... ...+|.+|++..+ ..+.++.+..-. ...=+.+.|+ |
T Consensus 110 ~~f~PhGi~~~~d~dg~~~L~Vvnh~~----~~s~ielf~~d~~~~~~~~~~~~~g~~~~-~pND~~v~~~--------G 176 (355)
T 3sre_A 110 SSFNPHGISTFIDDDNTVYLLVVNHPG----SSSTVEVFKFQEEEKSLLHLKTIRHKLLP-SVNDIVAVGP--------E 176 (355)
T ss_dssp GGCCEEEEEEEECTTCCEEEEEEECST----TCCEEEEEEEETTTTEEEEEEEECCTTCS-SEEEEEEEET--------T
T ss_pred CceeeeeeEEEECCCCcEEEEEEECCC----CCCeEEEEEEECCCCEEEEEeccccCCCC-CCceEEEeCC--------C
Confidence 4588888777662 33 355665542 1257777776543 234556553321 1122355665 4
Q ss_pred CEEEEEe-----------------CCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-eEEE
Q 047036 376 ESTFLGL-----------------DDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-SIVV 437 (634)
Q Consensus 376 ~~laSGS-----------------~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~IAS 437 (634)
...++.. ..+.|..+|+. . ++.+.. + . ..-..+|++||| +|++
T Consensus 177 ~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~--~~~~~~----------~--l---~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 177 HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D--VRVVAE----------G--F---DFANGINISPDGKYVYI 237 (355)
T ss_dssp EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--C--CEEEEE----------E--E---SSEEEEEECTTSSEEEE
T ss_pred CEEecCCcEeCCcccccchhhccCCccEEEEEECC--e--EEEeec----------C--C---cccCcceECCCCCEEEE
Confidence 4444432 13567777773 1 122110 0 0 012568999999 5655
Q ss_pred E-ECCCcEEEEeccc-cc-cccccccCCCCCeEEEEECC-CCCEEEE
Q 047036 438 G-SLDGKIRLYSKTS-MR-QAKTAFPGLGSPITHVDVTY-DGKWILG 480 (634)
Q Consensus 438 G-S~DGtIRLWD~~t-~r-~akt~L~GH~d~ItsVdfSp-DGk~LlS 480 (634)
+ +..+.|+.||+.. ++ .....+ ......-++++.+ +|++.++
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEE
T ss_pred EeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEE
Confidence 4 5789999999752 11 011233 2334567899999 5987665
No 311
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=69.46 E-value=25 Score=35.98 Aligned_cols=98 Identities=9% Similarity=0.057 Sum_probs=54.3
Q ss_pred EEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCC-ceEEecccCCCCccccccccccccCcceEEEEECCC----Ce
Q 047036 360 MRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRS-GIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGD----GS 434 (634)
Q Consensus 360 vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~-~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~d----G~ 434 (634)
-++|.|+ |+ ++.+...+.|++++ .+. ..+..+. +. ..+ ......++++|+ ++
T Consensus 35 ~ia~~pd--------G~-l~V~e~~g~I~~i~--~g~~~~~~~~~-----v~--~~g-----~~~p~gia~~pdf~~~g~ 91 (352)
T 2ism_A 35 ALAFLPD--------GG-MLIAERPGRIRLFR--EGRLSTYAELS-----VY--HRG-----ESGLLGLALHPRFPQEPY 91 (352)
T ss_dssp EEEECTT--------SC-EEEEETTTEEEEEE--TTEEEEEEECC-----CC--CST-----TCSEEEEEECTTTTTSCE
T ss_pred EEEEcCC--------Ce-EEEEeCCCeEEEEE--CCCccEeecce-----Ee--ecC-----CCCceeEEECCCCCCCCE
Confidence 3488998 55 45556679999998 222 1122211 10 000 123467899997 66
Q ss_pred EEEEEC-C-----CcEEEEecccc-----cccccccc---CCCCCeEEEEECCCCCEEEE
Q 047036 435 IVVGSL-D-----GKIRLYSKTSM-----RQAKTAFP---GLGSPITHVDVTYDGKWILG 480 (634)
Q Consensus 435 IASGS~-D-----GtIRLWD~~t~-----r~akt~L~---GH~d~ItsVdfSpDGk~LlS 480 (634)
|.++.. . +.|..|+..+. +.....++ +.......|+|.|||...++
T Consensus 92 lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 92 VYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp EEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred EEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 655433 2 56777776532 11112244 21122368999999977777
No 312
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=69.20 E-value=1.5e+02 Score=33.14 Aligned_cols=155 Identities=9% Similarity=0.033 Sum_probs=86.1
Q ss_pred CcEEEEeCCCCcEEEEEe--ccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcc
Q 047036 333 PGVQQLDIETGKIVTEWK--FEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVL 410 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lk--gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~ 410 (634)
..|+..|+++.+....+. +-... ..++|.+.. +.+.++-..+++|+++++.... ++.+...
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~---~~l~~d~~~-------~~lywtD~~~~~I~r~~~~g~~--~~~v~~~----- 77 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEA---SALDFDVTD-------NRIYWTDISLKTISRAFMNGSA--LEHVVEF----- 77 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCE---EEEEEETTT-------TEEEEEETTTTEEEEEETTSCS--CEEEECS-----
T ss_pred CcEEEEECCCCCcceEEEcCCCCce---EEEEEECCC-------CEEEEEECCCCeEEEEECCCCC--cEEEEeC-----
Confidence 469999999766544332 22221 245888862 3455566778999999987542 1222110
Q ss_pred ccccccccccCcceEEEEECCC-CeEE-EEECCCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEEEc---CCc
Q 047036 411 HWTQGHQFSRGTNFQCFASTGD-GSIV-VGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILGTT---DTY 485 (634)
Q Consensus 411 ~~~~g~~y~~~~~fssva~s~d-G~IA-SGS~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlSS~---D~t 485 (634)
+ . ..-..+|+... +.|+ +-+..+.|.+.++.+. ..+..+........+|++.|...+|.-+. ...
T Consensus 78 ----g----~-~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~-~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~ 147 (628)
T 4a0p_A 78 ----G----L-DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ-HRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPK 147 (628)
T ss_dssp ----S----C-SCCCEEEEETTTTEEEEEETTTTEEEEEETTST-TCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCE
T ss_pred ----C----C-CCcceEEEEeCCCEEEEEECCCCEEEEEecCCC-cEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCE
Confidence 0 0 01235677644 4554 4456788999998763 23333323334569999999655554422 345
Q ss_pred EEEEEcccccCCCCeeeeecCCCCCCCCCceeEeecCC
Q 047036 486 LILICTLFSDKDGKTKTGFSGRMGNKIPAPRLLKLTPL 523 (634)
Q Consensus 486 IrLWD~~~~~~~G~~~~gF~gh~~~~~p~pr~L~L~Pe 523 (634)
|...++ +|.....+... ...|.-|.+.|.
T Consensus 148 I~r~~~-----dG~~~~~l~~~----~~~P~GlalD~~ 176 (628)
T 4a0p_A 148 IDRAAM-----DGSERTTLVPN----VGRANGLTIDYA 176 (628)
T ss_dssp EEEEET-----TSCSCEEEECS----CSSEEEEEEETT
T ss_pred EEEEeC-----CCCceEEEECC----CCCcceEEEccc
Confidence 555553 45444443322 245666666654
No 313
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=68.40 E-value=75 Score=39.91 Aligned_cols=133 Identities=17% Similarity=0.270 Sum_probs=78.7
Q ss_pred CcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCcccc
Q 047036 333 PGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHW 412 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~ 412 (634)
++|.+.|+++-+.+..+..+.+-| .+ .-++|. .|+. -.+.+|+-|++.....+++.+..|.+-
T Consensus 86 ~~lQiFnl~~k~klks~~~~e~Vv-fW-kWis~~----------~l~l-VT~~aVyHW~~~~~s~P~k~fdR~~~L---- 148 (1630)
T 1xi4_A 86 KTLQIFNIEMKSKMKAHTMTDDVT-FW-KWISLN----------TVAL-VTDNAVYHWSMEGESQPVKMFDRHSSL---- 148 (1630)
T ss_pred CeEEEeehHHhhhhcccccCCCce-EE-EecCCC----------eeEE-EcCCeEEEeccCCCCccHHHHhcchhc----
Confidence 689999999988888888776533 23 233443 3433 346799999996543444445444321
Q ss_pred ccccccccCcceEEEEECCCC-e-EEEE------ECCCcEEEEeccccccccccccCCCCCeEEEEEC--CCCCEEEE-E
Q 047036 413 TQGHQFSRGTNFQCFASTGDG-S-IVVG------SLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVT--YDGKWILG-T 481 (634)
Q Consensus 413 ~~g~~y~~~~~fssva~s~dG-~-IASG------S~DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfS--pDGk~LlS-S 481 (634)
.++++-.-.++++. . +++| ...|.|.||.... +..+.+.||...-..+-+. +....|.+ .
T Consensus 149 -------~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er--~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~ 219 (1630)
T 1xi4_A 149 -------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFA 219 (1630)
T ss_pred -------ccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc--ccchhhhHhHhhhheeccCCCCCCceEEEEE
Confidence 12333333445555 2 2222 3568999999764 3557788988655444332 22234555 3
Q ss_pred cC----CcEEEEEc
Q 047036 482 TD----TYLILICT 491 (634)
Q Consensus 482 ~D----~tIrLWD~ 491 (634)
.. +.|+|.++
T Consensus 220 ~~~~~g~kLhi~Ei 233 (1630)
T 1xi4_A 220 VRGQAGGKLHIIEV 233 (1630)
T ss_pred EecCCCceEEEEec
Confidence 33 57777775
No 314
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=67.68 E-value=17 Score=37.34 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=42.6
Q ss_pred EEEEECCCCeEEEEECCCcEEEEecccccccccccc---CCCCCeEEEEECCC---CCEE-EE-EcC-----CcEEEEEc
Q 047036 425 QCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFP---GLGSPITHVDVTYD---GKWI-LG-TTD-----TYLILICT 491 (634)
Q Consensus 425 ssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~---GH~d~ItsVdfSpD---Gk~L-lS-S~D-----~tIrLWD~ 491 (634)
..+++.++|.|.++...|.|++++ .+.......++ .-.....+|+|+|| +.+| ++ +.. +.|..++.
T Consensus 34 ~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~ 112 (352)
T 2ism_A 34 WALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRH 112 (352)
T ss_dssp EEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEE
T ss_pred eEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEe
Confidence 478899999888888899999998 22111111122 11345789999999 5444 45 543 56666664
No 315
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=67.19 E-value=1.6e+02 Score=32.80 Aligned_cols=153 Identities=14% Similarity=0.232 Sum_probs=81.0
Q ss_pred eeEEeCCcceEEecCCCCCCCCCCcEEEEeCCC------CcEE--EEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEE
Q 047036 310 ALLMRGETNMMLMSPLKDGKPQAPGVQQLDIET------GKIV--TEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLG 381 (634)
Q Consensus 310 ~mL~~~D~~mllsss~d~~~~~~~TIrlWDleT------GK~V--~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSG 381 (634)
.++.+.++++.+.... +-|.++|..+ +..+ ..+..........|.++..|.+ |.+-+.|
T Consensus 423 ~i~~d~~g~lWigT~~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~------g~lWi~~ 489 (758)
T 3ott_A 423 YIFEDTAGQLWISTCL-------GGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNE------GNVWVLL 489 (758)
T ss_dssp EEEECTTSEEEEEESS-------SCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTT------SCEEEEE
T ss_pred EEEEcCCCCEEEEECC-------CceEEEccccccccCCcceecccccccccccccceeeeEEEcCC------CCEEEEc
Confidence 4455556666665432 3499998653 2222 2232211100002445555533 4555444
Q ss_pred eCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccccccccc-ccc
Q 047036 382 LDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKT-AFP 460 (634)
Q Consensus 382 S~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~akt-~L~ 460 (634)
+..+-|.++|++++. +..+. +.. ......+.+++...+|.|-.|+..| |..||..+.+ .+. ...
T Consensus 490 ~t~~Gl~~~d~~~~~--~~~~~-~~~----------~~~~~~~~~i~~d~~g~lWigt~~G-l~~~~~~~~~-~~~~~~~ 554 (758)
T 3ott_A 490 YNNKGIDKINPRTRE--VTKLF-ADE----------LTGEKSPNYLLCDEDGLLWVGFHGG-VMRINPKDES-QQSISFG 554 (758)
T ss_dssp TTCSSEEEEETTTTE--EEEEC-TTT----------SCGGGCEEEEEECTTSCEEEEETTE-EEEECC--CC-CCBCCCC
T ss_pred cCCCCcEEEeCCCCc--eEEec-CCC----------cCCCcccceEEECCCCCEEEEecCc-eEEEecCCCc-eEEeccc
Confidence 556779999998643 23331 000 0112346788888899888888766 6778876542 221 112
Q ss_pred CC-CCCeEEEEECCCCCEEEEEcCCcEEEEEcc
Q 047036 461 GL-GSPITHVDVTYDGKWILGTTDTYLILICTL 492 (634)
Q Consensus 461 GH-~d~ItsVdfSpDGk~LlSS~D~tIrLWD~~ 492 (634)
++ ...|.+|... +|+.-++|..+ |..+|..
T Consensus 555 gl~~~~i~~i~~~-~g~lWi~t~~G-l~~~~~~ 585 (758)
T 3ott_A 555 SFSNNEILSMTCV-KNSIWVSTTNG-LWIIDRK 585 (758)
T ss_dssp C---CCEEEEEEE-TTEEEEEESSC-EEEEETT
T ss_pred CCCccceEEEEEC-CCCEEEECCCC-eEEEcCC
Confidence 32 2568888874 78766666544 6666643
No 316
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=66.08 E-value=27 Score=33.28 Aligned_cols=96 Identities=20% Similarity=0.338 Sum_probs=61.0
Q ss_pred CCCCceeEEEEecCCCCCceEEeeccccc-eeeeeeccCCCCCCCCCchhhhccCccccceEEEE-ecce--eeeeeccc
Q 047036 69 NVKNPVKLYLHIGGNTPKAKWVISDKLTS-YSFVRTNKINGGNDSDDDEEESEKGVLGDGFWVLK-VGSK--VRAKVSTE 144 (634)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~-~g~~--~~~~v~~~ 144 (634)
...-.+.+|.|= ...+.+|+.+.+.+. -+|++- .. +-.|-|.- .+.+ |...|.+.
T Consensus 11 I~s~rA~Vm~~D--~~tk~~WvP~g~~~~~V~i~~d-----------------~~--rnsyRIvg~~d~kvvinc~I~~~ 69 (168)
T 1i2h_A 11 IFSTRAHVFQID--PNTKKNWVPTSKHAVTVSYFYD-----------------ST--RNVYRIISLDGSKAIINSTITPN 69 (168)
T ss_dssp SEEEEEEEEEEC--TTSSCCSEESCSSCEEEEEEEE-----------------TT--TTEEEEEEEETTEEEEEEECCTT
T ss_pred EEEEEEEEEEEC--CCCCCceeecCCCCeEEEEEEc-----------------CC--CCEEEEEEccCCEEEEecEecCC
Confidence 333457788772 223457999766553 346661 11 11243332 2334 89999999
Q ss_pred cCcccccccceEEEE---e-C--cEEEEEcCChHHHHHHHHHHHHhHhhhc
Q 047036 145 MQLKMFGDQRRIDFV---D-K--GVWALKFFSDSEYRKFVTEFQDRLFENV 189 (634)
Q Consensus 145 ~~~~~~~~~~~~~f~---~-~--~~w~lkF~~~~~~~~F~~~~~~~l~e~~ 189 (634)
|.+. .-+-.|. . . .+|-|.|.+.++...|...|..|+=.-.
T Consensus 70 l~Y~----kasp~FHqW~d~~~~~v~GLnF~Se~eA~~F~~~~~~ale~l~ 116 (168)
T 1i2h_A 70 MTFT----KTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEAAR 116 (168)
T ss_dssp CCEE----EEETTEEEEEETTTTEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred cEEe----eCCcccceeecCCCcEEEEeccCCHHHHHHHHHHHHHHHHHHH
Confidence 9875 2333333 2 2 5999999999999999999999875543
No 317
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=66.04 E-value=51 Score=29.03 Aligned_cols=86 Identities=17% Similarity=0.300 Sum_probs=58.4
Q ss_pred eeEEEEecCCCCCceEEeeccc---cceeeeeeccCCCCCCCCCchhhhccCccccceEEEEe---cce--eeeeecccc
Q 047036 74 VKLYLHIGGNTPKAKWVISDKL---TSYSFVRTNKINGGNDSDDDEEESEKGVLGDGFWVLKV---GSK--VRAKVSTEM 145 (634)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~---g~~--~~~~v~~~~ 145 (634)
+.+|.+- ..++ +|+++.+. ..-+|++- . .+-.|-+.-. +++ +...|-++|
T Consensus 11 A~V~~~d--~~~~-~W~p~~~~~g~s~V~~~~d-----------------~--~~~~yrIv~~~l~~~~vv~~~~l~~~~ 68 (112)
T 1evh_A 11 AAVMVYD--DANK-KWVPAGGSTGFSRVHIYHH-----------------T--GNNTFRVVGRKIQDHQVVINCAIPKGL 68 (112)
T ss_dssp EEEEEEE--TTTT-EEEEGGGCCSCEEEEEEEE-----------------T--TTTEEEEEEEETTTCCEEEEEEECTTC
T ss_pred EEEEEEc--CCCC-ceEECCCCCCceEEEEEEE-----------------C--CCCEEEEEEEECCCCcEEEeeEecCCc
Confidence 4555553 3444 89999864 33789982 1 1123544432 223 889999998
Q ss_pred CcccccccceEEEE---e-CcEEEEEcCChHHHHHHHHHHHHhH
Q 047036 146 QLKMFGDQRRIDFV---D-KGVWALKFFSDSEYRKFVTEFQDRL 185 (634)
Q Consensus 146 ~~~~~~~~~~~~f~---~-~~~w~lkF~~~~~~~~F~~~~~~~l 185 (634)
.+. +-+-.|. . ...|-|-|.+.++-..|...+.+||
T Consensus 69 ~y~----~~~p~Fh~w~~~~~~~GLnF~se~eA~~F~~~v~~al 108 (112)
T 1evh_A 69 KYN----QATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHAL 108 (112)
T ss_dssp CCB----CCSSSEEEEECSSCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred eEE----ecCccceeEecCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 875 3444554 2 2499999999999999999999886
No 318
>1xke_A RAN-binding protein 2; beta barrel, pleckstrin-homology (PH) domain, phosphotyrosine-binding (PTB) domain, protein transport; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=65.61 E-value=12 Score=34.00 Aligned_cols=60 Identities=23% Similarity=0.278 Sum_probs=43.9
Q ss_pred eEEEEe--cc-e--eeeeeccccCcccc-cccceEEEEe----Cc-----EEEEEcCChHHHHHHHHHHHHhHhh
Q 047036 128 FWVLKV--GS-K--VRAKVSTEMQLKMF-GDQRRIDFVD----KG-----VWALKFFSDSEYRKFVTEFQDRLFE 187 (634)
Q Consensus 128 ~w~~~~--g~-~--~~~~v~~~~~~~~~-~~~~~~~f~~----~~-----~w~lkF~~~~~~~~F~~~~~~~l~e 187 (634)
+-|++- +. + +.+.|.+.|.+.-. ...+.+.|++ ++ .|+|||.+.+.-..|.+.|..|.=+
T Consensus 46 ~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~s~~~~~~~~~d~~d~~~~~~~~~irfks~e~a~~f~~~~ee~k~~ 120 (130)
T 1xke_A 46 LRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRL 120 (130)
T ss_dssp EEEEEEETTTTEEEEEEECCTTSCEEECTTCSSCEEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCeEEEecEeCCCcEEeecCCCCeEEEEEecccCCCCCceEEEEEEECCHHHHHHHHHHHHHHHHH
Confidence 467763 22 3 99999999988632 2234556663 22 8999999999999999999988644
No 319
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=65.00 E-value=19 Score=32.04 Aligned_cols=75 Identities=17% Similarity=0.418 Sum_probs=54.4
Q ss_pred eEEeecc----ccceeeeeeccCCCCCCCCCchhhhccCccccceEEEEe----cce--eeeeeccccCcccccccceEE
Q 047036 88 KWVISDK----LTSYSFVRTNKINGGNDSDDDEEESEKGVLGDGFWVLKV----GSK--VRAKVSTEMQLKMFGDQRRID 157 (634)
Q Consensus 88 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~----g~~--~~~~v~~~~~~~~~~~~~~~~ 157 (634)
+|+++.. ...-+|++- . .+..|++... +++ +...|-++|.+. +-+-.
T Consensus 22 ~W~p~~~g~~gvs~V~~~~d-----------------~--~~~~yrI~~~~l~~~~~vv~~~~l~~~l~y~----~~~p~ 78 (115)
T 1egx_A 22 RWLPAGTGPQAFSRVQIYHN-----------------P--TANSFRVVGRKMQPDQQVVINCAIVRGVKYN----QATPN 78 (115)
T ss_dssp SCCBSSCSCCCCEEEEEEEE-----------------T--TTTEEEEEEEESSTTCCEEEEEEECSSCCCC----CSSTT
T ss_pred ceeECCCCCCCccEEEEEEe-----------------C--CCCEEEEEEEEcCCCCEEEEeeEEcCCceEE----ecCcc
Confidence 3999886 446889982 1 2335777652 223 889999998875 33444
Q ss_pred EE---e-CcEEEEEcCChHHHHHHHHHHHHhH
Q 047036 158 FV---D-KGVWALKFFSDSEYRKFVTEFQDRL 185 (634)
Q Consensus 158 f~---~-~~~w~lkF~~~~~~~~F~~~~~~~l 185 (634)
|. . ...|-|-|.+.++-..|..++.+||
T Consensus 79 FH~w~~~~~~~GLnF~se~eA~~F~~~v~~al 110 (115)
T 1egx_A 79 FHQWRDARQVWGLNFGSKEDAAQFAAGMASAL 110 (115)
T ss_dssp EEEEESSSCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred ceEEecCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 44 2 2499999999999999999999886
No 320
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=64.19 E-value=16 Score=37.77 Aligned_cols=66 Identities=15% Similarity=0.109 Sum_probs=42.9
Q ss_pred EEEEECCCCeEEEEECCCcEEEEecccccccccccc---CCCCCeEEEEECCC----CCEEEE-Ec---C----CcEEEE
Q 047036 425 QCFASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFP---GLGSPITHVDVTYD----GKWILG-TT---D----TYLILI 489 (634)
Q Consensus 425 ssva~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~---GH~d~ItsVdfSpD----Gk~LlS-S~---D----~tIrLW 489 (634)
..+++.++|.|.++..+|.|+++|..+ +.....++ .-.....+|+|+|| |...++ +. + +.|..|
T Consensus 32 ~~ia~~pdG~l~V~e~~g~I~~~d~~G-~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~ 110 (354)
T 3a9g_A 32 WSIAPLGGGRYLVTERPGRLVLISPSG-KKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRG 110 (354)
T ss_dssp EEEEEEETTEEEEEETTTEEEEECSSC-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEE
T ss_pred eEEEEcCCCeEEEEeCCCEEEEEeCCC-ceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEE
Confidence 567889999998889999999998433 21112222 11245789999998 554455 53 3 456666
Q ss_pred Ec
Q 047036 490 CT 491 (634)
Q Consensus 490 D~ 491 (634)
+.
T Consensus 111 ~~ 112 (354)
T 3a9g_A 111 RL 112 (354)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 321
>4hat_B RAN-specific GTPase-activating protein 1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_B* 4hav_B* 4haw_B* 4hax_B* 4hay_B* 4haz_B* 4hb0_B* 4hb2_B* 4hb3_B* 4hb4_B* 4gmx_B* 4gpt_B*
Probab=62.59 E-value=18 Score=33.40 Aligned_cols=60 Identities=23% Similarity=0.266 Sum_probs=44.2
Q ss_pred eEEEEec--c-e--eeeeeccccCccccc-ccceEEEEe-----Cc-----EEEEEcCChHHHHHHHHHHHHhHhh
Q 047036 128 FWVLKVG--S-K--VRAKVSTEMQLKMFG-DQRRIDFVD-----KG-----VWALKFFSDSEYRKFVTEFQDRLFE 187 (634)
Q Consensus 128 ~w~~~~g--~-~--~~~~v~~~~~~~~~~-~~~~~~f~~-----~~-----~w~lkF~~~~~~~~F~~~~~~~l~e 187 (634)
+-|++-- . + +.+.|.+.|.+.-.. ..+.+.|+. +| .|+|||.+.+.-.+|.+.|..|.=+
T Consensus 61 ~RllmR~d~~~kv~lN~~i~~~m~~~~~~~s~k~~v~~~~~D~sdg~~~~~~~~iRfk~~e~A~~f~~~~ee~~~~ 136 (140)
T 4hat_B 61 VRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEI 136 (140)
T ss_dssp EEEEEECTTTCCEEEEEECCTTCCCBCCTTCSSEEEEEEEEECTTSSCEEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCcceEEEEeEecCCeEEeEcCCCCceEEEEccccCCCCCCceEEEEEEECCHHHHHHHHHHHHHHHHH
Confidence 4577732 2 3 899999999976432 135566652 23 7999999999999999999998654
No 322
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=62.52 E-value=1.9e+02 Score=32.09 Aligned_cols=133 Identities=6% Similarity=-0.060 Sum_probs=71.8
Q ss_pred CcEEEEeCCCCcEEEE-EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 333 PGVQQLDIETGKIVTE-WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 333 ~TIrlWDleTGK~V~~-lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
+.|+.+++..+..... +...-... .-+++.+.+ +.+.++-...++|.+.|+..+.. +.+...
T Consensus 62 ~~I~r~~~~g~~~~~~v~~~~~~~P--~GlAvD~~~-------~~ly~~d~~~~~I~v~~~dG~~~--~~l~~~------ 124 (619)
T 3s94_A 62 EAIKRTEFNKTESVQNVVVSGLLSP--DGLACDWLG-------EKLYWTDSETNRIEVSNLDGSLR--KVLFWQ------ 124 (619)
T ss_dssp TEEEEEEC-----CEEEECSSCSCE--EEEEEETTT-------TEEEEEETTTTEEEEEETTSCSC--EEEECS------
T ss_pred CeEEEEEccCCCceEEEEeCCCCCc--CeEEEEecC-------CEEEEEeCCCCEEEEEECCCCCE--EEEEeC------
Confidence 5799999875432222 22211222 234777751 34555666789999999875432 233210
Q ss_pred cccccccccCcceEEEEECC-CCeEEEEEC--CCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEE-E-EcCCcE
Q 047036 412 WTQGHQFSRGTNFQCFASTG-DGSIVVGSL--DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWIL-G-TTDTYL 486 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~-dG~IASGS~--DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~Ll-S-S~D~tI 486 (634)
.. . .-..+++.| +|+|..... .+.|...+..+. .....+.......++|+++|+++.|. + +..++|
T Consensus 125 -----~l--~-~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~-~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I 195 (619)
T 3s94_A 125 -----EL--D-QPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFI 195 (619)
T ss_dssp -----SC--S-CCCCEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCE
T ss_pred -----CC--C-CCceEEEecCCCeEEEeccCCCCEEEEEECCCC-ceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeE
Confidence 00 0 113567766 467665543 356766666542 22233322334579999999866664 5 666778
Q ss_pred EEEEc
Q 047036 487 ILICT 491 (634)
Q Consensus 487 rLWD~ 491 (634)
...|.
T Consensus 196 ~~~~~ 200 (619)
T 3s94_A 196 HKSNL 200 (619)
T ss_dssp EEESS
T ss_pred EEecC
Confidence 77775
No 323
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=61.97 E-value=1.2e+02 Score=33.82 Aligned_cols=146 Identities=13% Similarity=0.183 Sum_probs=79.2
Q ss_pred eeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEE
Q 047036 309 KALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLC 388 (634)
Q Consensus 309 ~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIk 388 (634)
..++.+.++.+.+.. . .-|.++|..+++........... |.++..+ ...|..|+.+ .|.
T Consensus 66 ~~i~~d~~g~lWigT-~-------~Gl~~yd~~~~~f~~~~~~~~~~----i~~i~~~--------~g~lWigt~~-Gl~ 124 (758)
T 3ott_A 66 YCGVIIDNTYLYMGT-D-------NGILVYNYRADRYEQPETDFPTD----VRTMALQ--------GDTLWLGALN-GLY 124 (758)
T ss_dssp EEEEEETTTEEEEEE-T-------TEEEEEETTTTEECCCSCCCCSC----EEEEEEE--------TTEEEEEETT-EEE
T ss_pred EEEEEcCCCcEEEEe-C-------CCeEEEeCCCCEEECcccCCCce----EEEEEec--------CCcEEEEcCC-cce
Confidence 345556666665554 2 24999999987654311111111 2222211 2367777766 799
Q ss_pred EEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCCeEEEEECCCcEEEEecccccccc-ccccCC----C
Q 047036 389 QWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSMRQAK-TAFPGL----G 463 (634)
Q Consensus 389 lWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~r~ak-t~L~GH----~ 463 (634)
++|+.++. ++.+.... .-.....+.+++...+|.|-+|+..| |..||..+.+ .. ..++.. .
T Consensus 125 ~~~~~~~~--~~~~~~~~----------~~l~~~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~-~~~~~~~~~~~~~~ 190 (758)
T 3ott_A 125 TYQLQSRK--LTSFDTRR----------NGLPNNTIYSIIRTKDNQIYVGTYNG-LCRYIPSNGK-FEGIPLPVHSSQSN 190 (758)
T ss_dssp EEETTTCC--EEEECHHH----------HCCSCSCEEEEEECTTCCEEEEETTE-EEEEETTTTE-EEEECCCCCTTCSS
T ss_pred eEeCCCCe--EEEeccCC----------CCcCCCeEEEEEEcCCCCEEEEeCCC-HhhCccCCCc-eEEecCCCcccccc
Confidence 99987643 23321000 00112346788888889888888765 6678865532 11 122211 2
Q ss_pred CCeEEEEECCCCC--EEEEEcCCcEEEEEc
Q 047036 464 SPITHVDVTYDGK--WILGTTDTYLILICT 491 (634)
Q Consensus 464 d~ItsVdfSpDGk--~LlSS~D~tIrLWD~ 491 (634)
..|.+|...++|. ||.+ ++-|..+|.
T Consensus 191 ~~i~~i~~d~~~~~lWigt--~~Gl~~~~~ 218 (758)
T 3ott_A 191 LFVNSLLEDTTRQCVWIGT--EGYLFQYFP 218 (758)
T ss_dssp CCEEEEEEETTTTEEEEEE--EEEEEEEET
T ss_pred ceeEEEEEECCCCEEEEEE--CCCCeEEcC
Confidence 3489998888765 5544 234555553
No 324
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=60.94 E-value=23 Score=41.89 Aligned_cols=36 Identities=8% Similarity=-0.057 Sum_probs=30.6
Q ss_pred CeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeee
Q 047036 465 PITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGF 504 (634)
Q Consensus 465 ~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF 504 (634)
.|.+++.++|..+|.+ +.|++||+|++. +|+++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~----t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLS----TNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETT----TTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECC----CCCeEeee
Confidence 5788889999999999 999999999986 67776543
No 325
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=60.81 E-value=1.4e+02 Score=29.98 Aligned_cols=108 Identities=7% Similarity=0.006 Sum_probs=60.5
Q ss_pred CCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEe----CCCeEEEEEcCCCCceEEecccCCC
Q 047036 332 APGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGL----DDNRLCQWDMRDRSGIVQNMVKGDS 407 (634)
Q Consensus 332 ~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS----~D~tIklWD~R~~~~~Vq~l~gh~s 407 (634)
...|+.+++..++. ..+.... ...|+|+ ++.|+-.. ....|.+.++..... +.|..+..
T Consensus 87 ~~~Iy~i~~dg~~~-~~l~~~~------~~~~s~~--------g~~Iy~~~~~~~~~~~Iy~~~~dGs~~--~~lt~~~~ 149 (302)
T 3s25_A 87 RNSLCRIKRNGHGS-TVLDPDP------CIYASLI--------GNYIYYLHYDTQTATSLYRIRIDGEEK--KKIKNHYL 149 (302)
T ss_dssp SEEEEEEETTSCCC-EEEECSC------EEEEEEE--------TTEEEEEEESSSSCEEEEEEETTSCCC--EEEESSCC
T ss_pred CCeEEEEeCCCCcc-eEeecCC------ccEEEEe--------CCEEEEEeecCCCCceEEEEECCCCCe--EEEeCCCc
Confidence 35799999997753 2332211 2367777 45666554 466788888875432 33321110
Q ss_pred CccccccccccccCcceEEEEECCCC-eEEEEEC-CCcEEEEeccccccccccccCCCCCeEEEEECCCCCEEEE
Q 047036 408 PVLHWTQGHQFSRGTNFQCFASTGDG-SIVVGSL-DGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWILG 480 (634)
Q Consensus 408 ~V~~~~~g~~y~~~~~fssva~s~dG-~IASGS~-DGtIRLWD~~t~r~akt~L~GH~d~ItsVdfSpDGk~LlS 480 (634)
.+++++| .|+-.+. ...|..-++.+.. .+..+.+ +.. +.++|+|++|+=
T Consensus 150 -------------------~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~-~~~l~~~---~~~-~~~~P~g~~iy~ 200 (302)
T 3s25_A 150 -------------------FTCNTSDRYFYYNNPKNGQLYRYDTASQS-EALFYDC---NCY-KPVVLDDTNVYY 200 (302)
T ss_dssp -------------------CCSEEETTEEEEECTTTCCEEEEETTTTE-EEEEECS---CEE-EEEEEETTEEEE
T ss_pred -------------------eEeeEECCEEEEEeCCCceEEEEECCCCC-EEEEeCC---Ccc-ceeeecCCEEEE
Confidence 1223444 5554443 6778777776642 3333332 222 346799999985
No 326
>1rrp_B Nuclear pore complex protein NUP358; complex (small GTPase/nuclear protein), small GTPase, nuclear transport; HET: GNP; 2.96A {Homo sapiens} SCOP: b.55.1.3
Probab=60.36 E-value=12 Score=33.92 Aligned_cols=57 Identities=19% Similarity=0.257 Sum_probs=42.0
Q ss_pred eEEEEec--c-e--eeeeeccccCccccc-ccceEEEEe----C--c---EEEEEcCChHHHHHHHHHHHHh
Q 047036 128 FWVLKVG--S-K--VRAKVSTEMQLKMFG-DQRRIDFVD----K--G---VWALKFFSDSEYRKFVTEFQDR 184 (634)
Q Consensus 128 ~w~~~~g--~-~--~~~~v~~~~~~~~~~-~~~~~~f~~----~--~---~w~lkF~~~~~~~~F~~~~~~~ 184 (634)
+-|++-- . + |.+.|.+.|.+.-.. ..+.+.|+. + + .|+|||.+.+.-..|.+.|.+|
T Consensus 60 ~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~s~~~~~~~~~d~~d~~~k~~~~~irfk~~e~A~~f~~~~~e~ 131 (134)
T 1rrp_B 60 IRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTPEEAALFKCKFEEA 131 (134)
T ss_dssp CEEEEECTTTCCEEECCBCCSSCCCBCSTTCTTEEEEEEEECTTSSCEEEEEEEECSSHHHHHHHHHHHHHT
T ss_pred EEEEEEEcCCCcEEEEeEecCCceEeecCCCCeEEEEEcccccCCCCceEEEEEEECCHHHHHHHHHHHHHH
Confidence 4577632 2 2 899999999987321 235566653 1 1 8999999999999999999887
No 327
>3m1i_B RAN-specific GTPase-activating protein 1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae}
Probab=59.28 E-value=20 Score=34.90 Aligned_cols=60 Identities=23% Similarity=0.266 Sum_probs=45.1
Q ss_pred eEEEEec--c-e--eeeeeccccCccccc-ccceEEEEe-----Cc-----EEEEEcCChHHHHHHHHHHHHhHhh
Q 047036 128 FWVLKVG--S-K--VRAKVSTEMQLKMFG-DQRRIDFVD-----KG-----VWALKFFSDSEYRKFVTEFQDRLFE 187 (634)
Q Consensus 128 ~w~~~~g--~-~--~~~~v~~~~~~~~~~-~~~~~~f~~-----~~-----~w~lkF~~~~~~~~F~~~~~~~l~e 187 (634)
+-|++.- . + |.+.|.+.|.+.-.. ..+.+.|+. .| .|+|||.+.+.-..|...|..|.=+
T Consensus 112 ~RllMR~d~~~kV~LN~~I~~~m~~~~~~~sdks~v~~~~~D~sdge~k~e~~aIRFk~~E~A~eF~~~~eeaq~~ 187 (191)
T 3m1i_B 112 VRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEI 187 (191)
T ss_dssp EEEEEECTTTCCEEEEEECCTTCCCBCCTTCSSEEEEEEEEECTTSSCEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCcceEEEeeecCCCcEEeECCCCCceEEEEecCcCCCCCcceEEEEEEECCHHHHHHHHHHHHHHHHH
Confidence 4577742 2 3 899999999987432 235667763 23 8999999999999999999998654
No 328
>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A
Probab=57.91 E-value=22 Score=32.33 Aligned_cols=58 Identities=16% Similarity=0.256 Sum_probs=39.5
Q ss_pred eEEEEecc---e--eeeeeccccCcccccc--cceEEEE--eCc---EEEEEcCChHHHHHHHHHHHHhH
Q 047036 128 FWVLKVGS---K--VRAKVSTEMQLKMFGD--QRRIDFV--DKG---VWALKFFSDSEYRKFVTEFQDRL 185 (634)
Q Consensus 128 ~w~~~~g~---~--~~~~v~~~~~~~~~~~--~~~~~f~--~~~---~w~lkF~~~~~~~~F~~~~~~~l 185 (634)
+-|++--. + |.+.|.+.|.+.-... ..-+.|. .+| .|+|||.+.+.-.+|...|..|.
T Consensus 50 ~RllmR~d~~~kv~lN~~i~~~m~~~~~~~~~~~~v~~~~~~dgk~~~~~lrfks~e~A~~f~~~iee~~ 119 (130)
T 3n7c_A 50 VRVLCRSEGMGHVLLNTSVVKSFKYQPIDADNENLIKWPIITDGKLETFIIKVKQKADGRRLVGAVADAQ 119 (130)
T ss_dssp EEEEEEC-CCCCEEEEEECCTTBCCEESCTTCTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCceEEeeccccCCcEEeEcCCCCccEEEEEecCCCceEEEEEEECCHHHHHHHHHHHHHHH
Confidence 45676322 2 8999999997753221 1112222 245 99999999999999999998774
No 329
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=56.75 E-value=92 Score=31.76 Aligned_cols=55 Identities=13% Similarity=0.123 Sum_probs=32.2
Q ss_pred EEEEECCCCeEEEEECC--------------CcEEEEeccccc------------cccccccCCCCCeEEEEECC-CCCE
Q 047036 425 QCFASTGDGSIVVGSLD--------------GKIRLYSKTSMR------------QAKTAFPGLGSPITHVDVTY-DGKW 477 (634)
Q Consensus 425 ssva~s~dG~IASGS~D--------------GtIRLWD~~t~r------------~akt~L~GH~d~ItsVdfSp-DGk~ 477 (634)
..+++.++|+|.++..| |.|.-+|..+.- .....-.||.. ..+|+|.| +|+.
T Consensus 133 ~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rn-p~gl~~d~~~g~l 211 (353)
T 2g8s_A 133 GRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRN-PQGMAMNPWSNAL 211 (353)
T ss_dssp CCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSE-EEEEEEETTTTEE
T ss_pred ccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcC-ccceEEECCCCCE
Confidence 35789999966555443 456666654310 00011124543 57999999 7777
Q ss_pred EEE
Q 047036 478 ILG 480 (634)
Q Consensus 478 LlS 480 (634)
.++
T Consensus 212 ~~~ 214 (353)
T 2g8s_A 212 WLN 214 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 666
No 330
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=54.93 E-value=1.9e+02 Score=34.06 Aligned_cols=31 Identities=16% Similarity=0.145 Sum_probs=24.3
Q ss_pred ceEEEEECCCC-eEEEEECCCcEEEEeccccc
Q 047036 423 NFQCFASTGDG-SIVVGSLDGKIRLYSKTSMR 453 (634)
Q Consensus 423 ~fssva~s~dG-~IASGS~DGtIRLWD~~t~r 453 (634)
.+.+++.+++. +|.+=|.|+++|+|++.+++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 44566666554 88999999999999998864
No 331
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=53.65 E-value=47 Score=37.72 Aligned_cols=143 Identities=15% Similarity=0.123 Sum_probs=76.9
Q ss_pred cEEEEeCCC----C-cEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEE-ecccCCC
Q 047036 334 GVQQLDIET----G-KIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQ-NMVKGDS 407 (634)
Q Consensus 334 TIrlWDleT----G-K~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq-~l~gh~s 407 (634)
.|.+.|... | .+++-.-..+.. .-+.++||+|+ .+++|--+.+|-+.|.+.-...+. .+..-.+
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksP---HGv~vsPDGky-------i~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~ 368 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNP---HGCNTSSDGKY-------FIAAGKLSPTCSMIAIDKLPDLFAGKLADPRD 368 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSC---CCEEECTTSCE-------EEEECTTSSBEEEEEGGGHHHHHTTCCSCGGG
T ss_pred CeeEEccccccccCCceEEEEeCCCCC---cceeeCCCCCE-------EEEcCCCCCeEEEEEeehhhhhhhccccCccc
Confidence 467777765 3 344444333332 13488999663 677888899999999973100000 0000000
Q ss_pred CccccccccccccCcceEEEEECCCCeEE-EEECCCcEEEEeccccc---------cccccccCCCCCeEEEEE------
Q 047036 408 PVLHWTQGHQFSRGTNFQCFASTGDGSIV-VGSLDGKIRLYSKTSMR---------QAKTAFPGLGSPITHVDV------ 471 (634)
Q Consensus 408 ~V~~~~~g~~y~~~~~fssva~s~dG~IA-SGS~DGtIRLWD~~t~r---------~akt~L~GH~d~ItsVdf------ 471 (634)
.+. .+-..+.--.-.+|+++|... |--.|..|--|++.... ..+..++-|-. +-++..
T Consensus 369 ~~~-----ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~get~ 442 (638)
T 3sbq_A 369 VIV-----GEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCETN 442 (638)
T ss_dssp GEE-----ECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTTST
T ss_pred ceE-----eeccCCCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccC-CcccccCCCccC
Confidence 000 000011112345789999644 44599999999975410 01122222221 223333
Q ss_pred CCCCCEEEE----EcCCcE----------EEEEcc
Q 047036 472 TYDGKWILG----TTDTYL----------ILICTL 492 (634)
Q Consensus 472 SpDGk~LlS----S~D~tI----------rLWD~~ 492 (634)
.|||+||++ |.|.+| .|+|+.
T Consensus 443 ~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIs 477 (638)
T 3sbq_A 443 EADGKWLVALSKFSKDRFLPVGPLHPENDQLIDIS 477 (638)
T ss_dssp TCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECS
T ss_pred CCCccEEEEecccccccCcCCCCCCCCcceeEecC
Confidence 799999998 457776 788864
No 332
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=52.29 E-value=1.7e+02 Score=30.50 Aligned_cols=66 Identities=14% Similarity=0.087 Sum_probs=41.2
Q ss_pred EEEEECCCCeEEEEEC-CCcEEEEecccccc-cccccc----CCCCCeEEEEECCC----CCEEEE-EcCCcEEEEE
Q 047036 425 QCFASTGDGSIVVGSL-DGKIRLYSKTSMRQ-AKTAFP----GLGSPITHVDVTYD----GKWILG-TTDTYLILIC 490 (634)
Q Consensus 425 ssva~s~dG~IASGS~-DGtIRLWD~~t~r~-akt~L~----GH~d~ItsVdfSpD----Gk~LlS-S~D~tIrLWD 490 (634)
..+++.|+|.|.++.. .|.|++++..+++. ....++ .-..-..+|+|+|| |..-++ |....-+|+-
T Consensus 35 ~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 35 WGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred eEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 5789999998888887 89999998654321 111222 12345789999996 544455 5322334443
No 333
>2ifs_A N-WAsp, wiskott-aldrich syndrome protien ineracting protein and neural wiskott-aldrich syndrome...; verprolin, polyproline, protein- protein complex; NMR {Homo sapiens}
Probab=51.88 E-value=69 Score=30.47 Aligned_cols=86 Identities=19% Similarity=0.212 Sum_probs=59.2
Q ss_pred eeEEEEecCCCCCceEEeeccccceeeeeeccCCCCCCCCCchhhhccCccccceEEEEec---ce--eeeeeccccCcc
Q 047036 74 VKLYLHIGGNTPKAKWVISDKLTSYSFVRTNKINGGNDSDDDEEESEKGVLGDGFWVLKVG---SK--VRAKVSTEMQLK 148 (634)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~g---~~--~~~~v~~~~~~~ 148 (634)
|.||.. .|+.+|+.. -.-...||+- .. .-.|||-+++ ++ ..+.|=.+|.+.
T Consensus 65 aqLy~a----~~~~~W~~~-~~Gal~~vkD-----------------~~--~rsyf~RlvDl~~~~vvweqELY~~f~Y~ 120 (169)
T 2ifs_A 65 VQLYAA----DRNCMWSKK-CSGVACLVKD-----------------NP--QRSYFLRIFDIKDGKLLWEQELYNNFVYN 120 (169)
T ss_dssp EEEEEE----ETTTEEEEE-EEEEEEEEEE-----------------TT--TTEEEEEEEETTTCCCCEEEECCSSCCCB
T ss_pred EEEEEE----CCCCeeEec-CceEEEEEEE-----------------CC--CCeEEEEEEEccCCeEEEEeecccceeec
Confidence 788877 344799986 3455789982 11 1258988753 22 777777777764
Q ss_pred cccccceEEEE-e---CcEEEEEcCChHHHHHHHHHHHHhHhh
Q 047036 149 MFGDQRRIDFV-D---KGVWALKFFSDSEYRKFVTEFQDRLFE 187 (634)
Q Consensus 149 ~~~~~~~~~f~-~---~~~w~lkF~~~~~~~~F~~~~~~~l~e 187 (634)
+.+--|. | ++.|.|-|.+.++-..|..+.+.+|=.
T Consensus 121 ----~~r~~FHtFe~d~c~~GLnFade~EA~~F~~~V~~~l~~ 159 (169)
T 2ifs_A 121 ----SPRGYFHTFAGDTCQVALNFANEEEAKKFRKAVTDLLGR 159 (169)
T ss_dssp ----CCCSSEEEEECSSSEEEEECSCHHHHHHHHHHHHHHHHH
T ss_pred ----cCCCeEEEeecCCcEEEEeeCCHHHHHHHHHHHHHHHHH
Confidence 3333333 2 359999999999999999998876643
No 334
>1mke_A WIP - N-WAsp, fusion protein consisting of wiskott-aldrich syndrome protein interacting protein...; polyproline, protein-protein complex; NMR {Rattus norvegicus} SCOP: b.55.1.4
Probab=51.87 E-value=79 Score=29.59 Aligned_cols=84 Identities=19% Similarity=0.228 Sum_probs=58.1
Q ss_pred eeEEEEecCCCCCceEEeeccccceeeeeeccCCCCCCCCCchhhhccCccccceEEEEecc---e--eeeeeccccCcc
Q 047036 74 VKLYLHIGGNTPKAKWVISDKLTSYSFVRTNKINGGNDSDDDEEESEKGVLGDGFWVLKVGS---K--VRAKVSTEMQLK 148 (634)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~g~---~--~~~~v~~~~~~~ 148 (634)
|.||.. .|+.+|... -.-...||+- .. .-.|||-++.= + ..+.|=.+|.+.
T Consensus 48 aqLy~a----~~~~~W~~~-~~Gal~~VkD-----------------~~--~rsyf~RlvDl~~~~viweqELY~~f~Y~ 103 (152)
T 1mke_A 48 VQLYAA----DRNCMWSKK-CSGVACLVKD-----------------NP--QRSYFLRIFDIKDGKLLWEQELYNNFVYN 103 (152)
T ss_dssp EEEEEE----ETTTEEEEE-EEEEEEEEEE-----------------TT--TTEEEEEEECSSSCSEEEEEECCSSCCCB
T ss_pred EEEEEE----CCCCceEec-CceEEEEEEE-----------------CC--CCeEEEEEEEccCCeEEEEeecccceeec
Confidence 678876 344799985 3456789982 11 12589987542 2 777777777664
Q ss_pred cccccceEEEE-e---CcEEEEEcCChHHHHHHHHHHHHhH
Q 047036 149 MFGDQRRIDFV-D---KGVWALKFFSDSEYRKFVTEFQDRL 185 (634)
Q Consensus 149 ~~~~~~~~~f~-~---~~~w~lkF~~~~~~~~F~~~~~~~l 185 (634)
+.+--|. | ++.|.|-|.+.++-..|..+.+..|
T Consensus 104 ----~~r~~FHtFe~d~c~~GLnFade~EA~~F~~~V~~~l 140 (152)
T 1mke_A 104 ----SPRGYFHTFAGDTCQVALNFANEEEAKKFRKAVTDLL 140 (152)
T ss_dssp ----CSSSSEEEEECSSSEEEEEESSHHHHHHHHHHHHHHH
T ss_pred ----cCCCeEEEEecCCcEEEEeeCCHHHHHHHHHHHHHHH
Confidence 2233333 3 3599999999999999999999877
No 335
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=49.22 E-value=2.5e+02 Score=29.29 Aligned_cols=153 Identities=10% Similarity=0.074 Sum_probs=83.9
Q ss_pred CEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEE---CCCCeEEEEEC------------
Q 047036 376 ESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFAS---TGDGSIVVGSL------------ 440 (634)
Q Consensus 376 ~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~---s~dG~IASGS~------------ 440 (634)
...++....++|..||+..+......+.+-.+ ........+.+.+ .++|+|.+.+.
T Consensus 26 ~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~---------~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 26 VFYQSNLYKGRIEVYNPKTQSHFNVVIDGASS---------NGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp EEEEEETTTTEEEEECTTTCCEEEECCTTTCC---------SSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred EEEEEeccCCEEEEEcCCCCeEEEEecCCccc---------cCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 34555558999999999643211112211000 0011223477888 57785444333
Q ss_pred --CCcEEEEecc---ccccccc--cccCCC-----------CCeEEEEECCCCCEEEE-EcC-CcEEEEEcccccCCCCe
Q 047036 441 --DGKIRLYSKT---SMRQAKT--AFPGLG-----------SPITHVDVTYDGKWILG-TTD-TYLILICTLFSDKDGKT 500 (634)
Q Consensus 441 --DGtIRLWD~~---t~r~akt--~L~GH~-----------d~ItsVdfSpDGk~LlS-S~D-~tIrLWD~~~~~~~G~~ 500 (634)
+..|..||+. +++ ... .|.++. .....|++-++|+.-++ +.- +.|..++ .+|+.
T Consensus 97 ~g~~~v~~~Dl~~~~tg~-~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~-----pdG~~ 170 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSK-PVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVS-----ADGKT 170 (334)
T ss_dssp SSCCEEEEEESSCCTTCC-CSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEEC-----TTSCC
T ss_pred CCCCEEEEEcCCcCCCCC-EEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEe-----CCCCE
Confidence 6789999988 543 221 222221 24789999999998887 777 7776666 35654
Q ss_pred eeeecCCCCCCCCCceeEeecCCCccccC-CCcccccccccccccCCCCceEEEEEcCCeEEEEeCh
Q 047036 501 KTGFSGRMGNKIPAPRLLKLTPLDSHLAG-TDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQ 566 (634)
Q Consensus 501 ~~gF~gh~~~~~p~pr~L~L~Pe~~~~~g-~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~ 566 (634)
+..|.-.+. ......| ..+.++|+ | ..+||+-+++-++..|+.
T Consensus 171 ~~~~~~~~~-------------~~~~~~G~nGIv~~pd--------g--~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 171 VSTFAWESG-------------NGGQRPGYSGITFDPH--------S--NKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEEEECCC-------------CSSSCCSCSEEEEETT--------T--TEEEEESSSSSEEEEECS
T ss_pred EeeeeecCC-------------CcccccCcceEEEeCC--------C--CEEEEEcCCCeEEEEcCC
Confidence 444432221 0000111 23455554 3 356677457888888976
No 336
>2crf_A RAN binding protein 3; RAN_BP1 domain, ranbp3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=48.60 E-value=28 Score=32.32 Aligned_cols=57 Identities=16% Similarity=0.226 Sum_probs=41.3
Q ss_pred eEEEEe--cc-e--eeeeeccccCcccccccceEEEEe----Cc---EEEEEcCChHHHHHHHHHHHHhH
Q 047036 128 FWVLKV--GS-K--VRAKVSTEMQLKMFGDQRRIDFVD----KG---VWALKFFSDSEYRKFVTEFQDRL 185 (634)
Q Consensus 128 ~w~~~~--g~-~--~~~~v~~~~~~~~~~~~~~~~f~~----~~---~w~lkF~~~~~~~~F~~~~~~~l 185 (634)
+-|++- +. + |.+.|.+.|.+. -...+.+.|.. ++ .|+|||.+.+.-..|...|..+.
T Consensus 69 ~RlvmR~d~~~kv~lN~~i~~~m~~~-~~~~k~~~~~~~d~~d~~~~~~lirfk~~e~a~lf~~~~e~i~ 137 (150)
T 2crf_A 69 SRLVMRTQGSLRLILNTKLWAQMQID-KASEKSIHITAMDTEDQGVKVFLISASSKDTGQLYAALHHRIL 137 (150)
T ss_dssp EEEEEEESSSCCEEEEEECCTTCCEE-CCSSSEEEEEEEBSSSCCEEEEEEECCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCcceEEeeeeccCCceee-cCCCCEEEEEeecCCCCceEEEEEEECCHHHHHHHHHHHHHHH
Confidence 467763 22 3 999999999987 33467777773 22 99999999998887776655544
No 337
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=48.33 E-value=1.1e+02 Score=27.55 Aligned_cols=47 Identities=19% Similarity=0.214 Sum_probs=36.6
Q ss_pred eeeeeccccCcccccccceEEEE-e---CcEEEEEcCChHHHHHHHHHHHHhHhh
Q 047036 137 VRAKVSTEMQLKMFGDQRRIDFV-D---KGVWALKFFSDSEYRKFVTEFQDRLFE 187 (634)
Q Consensus 137 ~~~~v~~~~~~~~~~~~~~~~f~-~---~~~w~lkF~~~~~~~~F~~~~~~~l~e 187 (634)
+.+.|-++|.+. +.+-.|. | ...+.|.|.+.++-.+|..++.+||=.
T Consensus 61 ~n~~i~~~~~y~----~~~~~Fh~w~~~~~~~GL~F~se~eA~~F~~~~~~al~~ 111 (130)
T 1qc6_A 61 INYSIVKGLKYN----QATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALNI 111 (130)
T ss_dssp EEEECCTTCEEE----EEETTEEEEECSSCEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred EeeEEeCCcEEe----ccCCeeEEEEcCCEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 788999998885 2333333 2 249999999999999999999999644
No 338
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=48.20 E-value=42 Score=34.37 Aligned_cols=58 Identities=14% Similarity=0.141 Sum_probs=37.7
Q ss_pred EEEEECCCCe-EEEEECCCcEEEEeccccc-ccccccc----CCCCCeEEEEECCC----CCEEEE-Ec
Q 047036 425 QCFASTGDGS-IVVGSLDGKIRLYSKTSMR-QAKTAFP----GLGSPITHVDVTYD----GKWILG-TT 482 (634)
Q Consensus 425 ssva~s~dG~-IASGS~DGtIRLWD~~t~r-~akt~L~----GH~d~ItsVdfSpD----Gk~LlS-S~ 482 (634)
..+++.|+|. |.++...|.|++++..+.. .....++ .-.....+|+|+|| |...++ +.
T Consensus 21 ~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~ 89 (353)
T 2g8s_A 21 WALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSE 89 (353)
T ss_dssp EEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeC
Confidence 5778999997 9999999999999864321 0111121 11234689999996 544455 44
No 339
>2y8g_A Ranbp3-B, RAN-binding protein 3; protein transport, CRM1-mediated nuclear export; 1.61A {Homo sapiens} PDB: 2y8f_A
Probab=48.10 E-value=25 Score=32.23 Aligned_cols=57 Identities=16% Similarity=0.233 Sum_probs=41.8
Q ss_pred eEEEEe--cc-e--eeeeeccccCcccccccceEEEEe----Cc---EEEEEcCChHHHHHHHHHHHHhH
Q 047036 128 FWVLKV--GS-K--VRAKVSTEMQLKMFGDQRRIDFVD----KG---VWALKFFSDSEYRKFVTEFQDRL 185 (634)
Q Consensus 128 ~w~~~~--g~-~--~~~~v~~~~~~~~~~~~~~~~f~~----~~---~w~lkF~~~~~~~~F~~~~~~~l 185 (634)
+-|++- +. + +.+.|.+.|.+.- ...+.+.|.+ ++ .|+|||.+.+.-..|...|.++.
T Consensus 57 ~RlvmR~d~~~kv~lN~~i~~~m~~~~-~~~k~~~~~~~d~~d~~~~~~lirfk~~e~a~lf~~~~~~i~ 125 (138)
T 2y8g_A 57 SRLVMRTQGSLRLILNTKLWAQMQIDK-ASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRIL 125 (138)
T ss_dssp EEEEEEETTTCCEEEEEECCTTCCEEE-EETTEEEEECCC--CCCCCEEEEECCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCcceEEEeeEecCCceeec-CCCCEEEEEEecCCCCceEEEEEEECCHHHHHHHHHHHHHHH
Confidence 457763 22 3 9999999999873 3357777774 22 99999999998888877666655
No 340
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=47.57 E-value=28 Score=39.30 Aligned_cols=53 Identities=11% Similarity=0.157 Sum_probs=35.2
Q ss_pred EEECCCCeEEEEECC-------------CcEEEEeccccccccccccC-CCCCeEEEEECCCCCEEEE
Q 047036 427 FASTGDGSIVVGSLD-------------GKIRLYSKTSMRQAKTAFPG-LGSPITHVDVTYDGKWILG 480 (634)
Q Consensus 427 va~s~dG~IASGS~D-------------GtIRLWD~~t~r~akt~L~G-H~d~ItsVdfSpDGk~LlS 480 (634)
+++.++|.|..+..- +.+..++..+++ .+..+.+ ....+++|+||||+++|..
T Consensus 481 L~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGe-l~~fl~~P~~aEpnGiafSPD~ktLfV 547 (592)
T 4a9v_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCC-EEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred eEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCe-EEEEEeCCCCccccCCEECCCCCEEEE
Confidence 678888876664432 146666765553 4444443 2456899999999998855
No 341
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=45.91 E-value=2.1e+02 Score=27.40 Aligned_cols=67 Identities=10% Similarity=0.141 Sum_probs=36.5
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCCcEEEE--EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC-----CeEE
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTE--WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD-----NRLC 388 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~--lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D-----~tIk 388 (634)
+..+++.++.+.. .....+.++|+.+++-... +...... -.+ .. .+ +.+.+.|+.+ +.+.
T Consensus 112 ~~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~-~~-~~--------~~iyv~GG~~~~~~~~~~~ 178 (301)
T 2vpj_A 112 GDMIYVSGGFDGS-RRHTSMERYDPNIDQWSMLGDMQTAREG--AGL-VV-AS--------GVIYCLGGYDGLNILNSVE 178 (301)
T ss_dssp TTEEEEECCBCSS-CBCCEEEEEETTTTEEEEEEECSSCCBS--CEE-EE-ET--------TEEEEECCBCSSCBCCCEE
T ss_pred CCEEEEEcccCCC-cccceEEEEcCCCCeEEECCCCCCCccc--ceE-EE-EC--------CEEEEECCCCCCcccceEE
Confidence 4567777775432 1234799999998764332 2111111 011 11 13 3566666654 5688
Q ss_pred EEEcCCC
Q 047036 389 QWDMRDR 395 (634)
Q Consensus 389 lWD~R~~ 395 (634)
++|+.+.
T Consensus 179 ~~d~~~~ 185 (301)
T 2vpj_A 179 KYDPHTG 185 (301)
T ss_dssp EEETTTT
T ss_pred EEeCCCC
Confidence 8898764
No 342
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=45.70 E-value=38 Score=35.35 Aligned_cols=115 Identities=12% Similarity=0.173 Sum_probs=65.5
Q ss_pred eEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEe-cCCCCCCCCCCCEEEEE--eCCCeEEEEEcCCC
Q 047036 319 MMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDIT-NDTKSSQLDPSESTFLG--LDDNRLCQWDMRDR 395 (634)
Q Consensus 319 mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfs-Pd~K~~q~~~g~~laSG--S~D~tIklWD~R~~ 395 (634)
+++.+..| +.|+-.|.++|+++-+++..... +++... |. .. . +..++.+ +.|+.|..+|+.++
T Consensus 12 ~V~v~t~d------G~l~Ald~~tG~~~W~~~~~~~~---p~~~~~~~~--~~--~-~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 12 ILIAADVE------GGLHAVDRRNGHIIWSIEPENFQ---PLIEIQEPS--RL--E-TYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEETT------SCEEEEETTTTEEEEEECGGGSC---CSEECCCSC--TT--T-SSEEEEECCSTTTEEEEEETTTE
T ss_pred EEEEEeCC------CeEEEEECCCCcEEEEecCCccC---CcEEecCCc--cc--c-CCcEEEEEECCCCEEEEEECCCC
Confidence 45555554 68999999999999888775111 121211 21 00 0 2244444 68999999998765
Q ss_pred CceEEecccCCCCccccccccccccCcceEE----E-----EECCCCeEEEEECCCcEEEEecccccccccccc
Q 047036 396 SGIVQNMVKGDSPVLHWTQGHQFSRGTNFQC----F-----ASTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFP 460 (634)
Q Consensus 396 ~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fss----v-----a~s~dG~IASGS~DGtIRLWD~~t~r~akt~L~ 460 (634)
... ..+. -...+...++.. + ..+.+|.|++|+.+|.+..-|+.+++ .+-.+.
T Consensus 78 ~~~-~~~~-----------~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~-~~W~~~ 138 (339)
T 2be1_A 78 LQK-LPLS-----------IRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE-IISAFG 138 (339)
T ss_dssp EEE-EEEE-----------HHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCC-EEEEES
T ss_pred cEE-eeec-----------cccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc-EEEEEe
Confidence 221 1110 000111111211 0 01257799999999999999999885 554443
No 343
>1k5d_B RAN-specific GTPase-activating protein; ranbp1, rangap, GAP, signal transduction, nuclear transport, GTP hydrolysis, ground state; HET: GNP; 2.70A {Homo sapiens} SCOP: b.55.1.3 PDB: 1k5g_B*
Probab=45.57 E-value=41 Score=32.88 Aligned_cols=60 Identities=22% Similarity=0.303 Sum_probs=43.4
Q ss_pred eEEEEe--cc-e--eeeeeccccCccccc-ccceEEEEe-----Cc-----EEEEEcCChHHHHHHHHHHHHhHhh
Q 047036 128 FWVLKV--GS-K--VRAKVSTEMQLKMFG-DQRRIDFVD-----KG-----VWALKFFSDSEYRKFVTEFQDRLFE 187 (634)
Q Consensus 128 ~w~~~~--g~-~--~~~~v~~~~~~~~~~-~~~~~~f~~-----~~-----~w~lkF~~~~~~~~F~~~~~~~l~e 187 (634)
+-|++. +. + |++.|.+.|.+.-.. -.+.+.|+. ++ .|+|||.+.+.-..|...|..|.=+
T Consensus 86 ~RlvMR~d~~~kV~LN~~I~~~m~~~~~~~s~ks~v~~~~~d~ad~~~k~e~~~iRfks~e~A~~f~~~~ee~k~~ 161 (201)
T 1k5d_B 86 IRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKE 161 (201)
T ss_dssp EEEEEEETTTCCEEEEEECCSSCCCCBCSSCSSEEEEEEEEECTTSSCEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCcceEEEeeEecCCceeeecCCCCceEEEEeccccCCCCCceEEEEEEECCHHHHHHHHHHHHHHHHH
Confidence 567773 22 3 999999999886321 133455532 12 7999999999999999999998744
No 344
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=45.54 E-value=27 Score=42.02 Aligned_cols=36 Identities=8% Similarity=-0.057 Sum_probs=29.9
Q ss_pred CeEEEEECCCCCEEEE-EcCCcEEEEEcccccCCCCeeeee
Q 047036 465 PITHVDVTYDGKWILG-TTDTYLILICTLFSDKDGKTKTGF 504 (634)
Q Consensus 465 ~ItsVdfSpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF 504 (634)
.|.+++.+++.++|.+ +.|++||+|++. +|+|+.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~----t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLS----TNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETT----TTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECC----CCCeEEee
Confidence 5667788899999999 999999999986 67776653
No 345
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=45.28 E-value=36 Score=38.33 Aligned_cols=53 Identities=11% Similarity=0.155 Sum_probs=34.9
Q ss_pred EEECCCCeEEEEECCC-------------cEEEEeccccccccccccC-CCCCeEEEEECCCCCEEEE
Q 047036 427 FASTGDGSIVVGSLDG-------------KIRLYSKTSMRQAKTAFPG-LGSPITHVDVTYDGKWILG 480 (634)
Q Consensus 427 va~s~dG~IASGS~DG-------------tIRLWD~~t~r~akt~L~G-H~d~ItsVdfSpDGk~LlS 480 (634)
++|++.|.|.++-..+ .+-+.+..+++ ++.-+.+ -+..+++++|||||++|..
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~-~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCC-EEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCe-EEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 6788998766665432 34455555442 4444444 3568999999999998754
No 346
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=44.47 E-value=2.5e+02 Score=27.83 Aligned_cols=191 Identities=7% Similarity=0.035 Sum_probs=98.2
Q ss_pred CCeEEEecCeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCc
Q 047036 265 DNSFLVSDLGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGK 344 (634)
Q Consensus 265 D~sfvv~G~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK 344 (634)
+.-|+|.+..=.||+....|--. ..+.+.+. -.|.++.+ .+++.+++++..+ ..|++.++....
T Consensus 39 ~~L~aV~d~~~~I~~ld~~g~v~--~~i~l~g~-------~D~EGIa~-~~~g~~~vs~E~~------~~l~~~~v~~~~ 102 (255)
T 3qqz_A 39 NTLFSTINKPAAIVEMTTNGDLI--RTIPLDFV-------KDLETIEY-IGDNQFVISDERD------YAIYVISLTPNS 102 (255)
T ss_dssp TEEEEEEETTEEEEEEETTCCEE--EEEECSSC-------SSEEEEEE-CSTTEEEEEETTT------TEEEEEEECTTC
T ss_pred CEEEEEECCCCeEEEEeCCCCEE--EEEecCCC-------CChHHeEE-eCCCEEEEEECCC------CcEEEEEcCCCC
Confidence 34677777766677775554110 11122221 13444333 3555555665443 468888765432
Q ss_pred ---EEEEEec------cCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCC--eEEEEEcCCCCceEEecccCCCCccccc
Q 047036 345 ---IVTEWKF------EKDGTDITMRDITNDTKSSQLDPSESTFLGLDDN--RLCQWDMRDRSGIVQNMVKGDSPVLHWT 413 (634)
Q Consensus 345 ---~V~~lkg------H~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~--tIklWD~R~~~~~Vq~l~gh~s~V~~~~ 413 (634)
.+....- +..+ +.-+++.|. ++.|+++.... .|+.|+-......++.+. + +. +.
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g--~EGLA~d~~--------~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~-~--~~--~~ 167 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCG--FEGLAYSRQ--------DHTFWFFKEKNPIEVYKVNGLLSSNELHISK-D--KA--LQ 167 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSC--CEEEEEETT--------TTEEEEEEESSSEEEEEEESTTCSSCCEEEE-C--HH--HH
T ss_pred eeeeeeeeccccccccccCC--cceEEEeCC--------CCEEEEEECcCCceEEEEcccccCCceeeec-c--hh--hc
Confidence 3444431 1122 235588887 45666665543 566666111111112111 0 00 00
Q ss_pred cccccccCcceEEEEECCC-C-eEEEEECCCcEEEEecccccccccccc-CC-C-----CCeEEEEECCCCCEEEEEcCC
Q 047036 414 QGHQFSRGTNFQCFASTGD-G-SIVVGSLDGKIRLYSKTSMRQAKTAFP-GL-G-----SPITHVDVTYDGKWILGTTDT 484 (634)
Q Consensus 414 ~g~~y~~~~~fssva~s~d-G-~IASGS~DGtIRLWD~~t~r~akt~L~-GH-~-----d~ItsVdfSpDGk~LlSS~D~ 484 (634)
+. ..-.+++++++.|. | .++.....+.|-.+|..+.-.....|. |+ + ..--+|+|.|+|+..+++.-+
T Consensus 168 -~~--~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n 244 (255)
T 3qqz_A 168 -RQ--FTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN 244 (255)
T ss_dssp -HT--CCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT
T ss_pred -cc--cccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc
Confidence 00 01235788999875 4 456667778888999876311112333 32 1 245799999999976777777
Q ss_pred cEEEE
Q 047036 485 YLILI 489 (634)
Q Consensus 485 tIrLW 489 (634)
-+..+
T Consensus 245 ~~y~f 249 (255)
T 3qqz_A 245 RFYRF 249 (255)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 44443
No 347
>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.40 E-value=51 Score=29.60 Aligned_cols=56 Identities=7% Similarity=0.102 Sum_probs=40.6
Q ss_pred eEEEEe--cc--e--eeeeeccccCcccccccceEEEEe------Cc-------EEEEEcCChHHHHHHHHHHHHh
Q 047036 128 FWVLKV--GS--K--VRAKVSTEMQLKMFGDQRRIDFVD------KG-------VWALKFFSDSEYRKFVTEFQDR 184 (634)
Q Consensus 128 ~w~~~~--g~--~--~~~~v~~~~~~~~~~~~~~~~f~~------~~-------~w~lkF~~~~~~~~F~~~~~~~ 184 (634)
+.|++- +. + +++.|.+.|.+.-.. ..++.++. .| .|+|||++.+.-.+|.+.|.+|
T Consensus 48 ~RllmR~d~~~~kv~lN~~i~~~m~~~~~g-~~~~~~~~~~~~~~d~~~~~~~~~~~lrfk~~e~a~~f~~~~~e~ 122 (125)
T 2ec1_A 48 TQLLVRADTNLGNILLNVLIPPNMPCTRTG-KNNVLIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEK 122 (125)
T ss_dssp EEEEEEESSSSCCBSCCEECCSSCCEECCT-TTEEEEEECCSSCSCSSSSSSCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCEEEEeeEEcCCCeEEecC-CCcEEEEEccCCcccCCCCCceEEEEEEECCHHHHHHHHHHHHHh
Confidence 467773 32 3 899999999987432 23444331 22 7999999999999999999876
No 348
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=38.79 E-value=2.7e+02 Score=26.70 Aligned_cols=30 Identities=13% Similarity=0.010 Sum_probs=19.3
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCCcE
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETGKI 345 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTGK~ 345 (634)
+..+++.++.+........+.++|+.+++-
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 456777777542222235699999998764
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=37.87 E-value=1.7e+02 Score=31.48 Aligned_cols=58 Identities=16% Similarity=0.231 Sum_probs=38.1
Q ss_pred EEEEECCCC--eEEEEECCCcEEEEeccccc--ccccccc-----C----CCCCeEEEEECCC----CCEEEE-Ec
Q 047036 425 QCFASTGDG--SIVVGSLDGKIRLYSKTSMR--QAKTAFP-----G----LGSPITHVDVTYD----GKWILG-TT 482 (634)
Q Consensus 425 ssva~s~dG--~IASGS~DGtIRLWD~~t~r--~akt~L~-----G----H~d~ItsVdfSpD----Gk~LlS-S~ 482 (634)
..+++.|+| +|.++...|.|++++..+.. .....++ + -..-..+|+|+|| |..-++ +.
T Consensus 17 ~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 17 VGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp EEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred eEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 467888998 49999999999999854321 0111111 1 1345789999997 665566 64
No 350
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=37.86 E-value=4.6e+02 Score=29.05 Aligned_cols=192 Identities=8% Similarity=-0.051 Sum_probs=96.6
Q ss_pred CCcEEEeee-C-CCeEEEec---CeeeEEEccCCceecceeEEEecCCCCCcccccCcceeeEEeCCcceEEecCCCCCC
Q 047036 255 GVQSLTLGA-L-DNSFLVSD---LGLQVYRNYNRGIHNKGVSVRFDGGSSKIGSNSTPKKALLMRGETNMMLMSPLKDGK 329 (634)
Q Consensus 255 ~~~~LavG~-~-D~sfvv~G---~~igV~k~~~~gl~~~~~~~~~~~~~~~~g~~fsP~~~mL~~~D~~mllsss~d~~~ 329 (634)
-.+..++.+ + ++.+.+.+ .+|..+. .+|......+ +. .+ ...|.++-+.-..++++++....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~--~~g~~~~~~v--~~-----~~-~~~P~GlAvD~~~~~ly~~d~~~--- 105 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTE--FNKTESVQNV--VV-----SG-LLSPDGLACDWLGEKLYWTDSET--- 105 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEE--C-----CEEE--EC-----SS-CSCEEEEEEETTTTEEEEEETTT---
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEE--ccCCCceEEE--Ee-----CC-CCCcCeEEEEecCCEEEEEeCCC---
Confidence 445777777 3 55544443 4665554 3332111111 11 11 13566654433355666676553
Q ss_pred CCCCcEEEEeCCCCcEEEEEe-ccCCCcceeEEEEecCCCCCCCCCCCEEEEEeC--CCeEEEEEcCCCCceEEecccCC
Q 047036 330 PQAPGVQQLDIETGKIVTEWK-FEKDGTDITMRDITNDTKSSQLDPSESTFLGLD--DNRLCQWDMRDRSGIVQNMVKGD 406 (634)
Q Consensus 330 ~~~~TIrlWDleTGK~V~~lk-gH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~--D~tIklWD~R~~~~~Vq~l~gh~ 406 (634)
+.|.+.|+. |+.++.+- ..-... .-+++.|. +..|+-.-. ...|.+.++..... ..+..
T Consensus 106 ---~~I~v~~~d-G~~~~~l~~~~l~~P--~~Iavdp~--------~g~ly~tD~g~~~~I~r~~~dG~~~--~~l~~-- 167 (619)
T 3s94_A 106 ---NRIEVSNLD-GSLRKVLFWQELDQP--RAIALDPS--------SGFMYWTDWGEVPKIERAGMDGSSR--FIIIN-- 167 (619)
T ss_dssp ---TEEEEEETT-SCSCEEEECSSCSCC--CCEEEETT--------TTEEEEEECSSSCEEEEEETTSCSC--EEEEC--
T ss_pred ---CEEEEEECC-CCCEEEEEeCCCCCC--ceEEEecC--------CCeEEEeccCCCCEEEEEECCCCce--EEEEe--
Confidence 689999987 54444443 222221 12377775 234443332 35677777653321 22210
Q ss_pred CCccccccccccccCcceEEEEECCC-CeEEEE-ECCCcEEEEecccccccccccc-CCCCCeEEEEECCCCCEEEE-Ec
Q 047036 407 SPVLHWTQGHQFSRGTNFQCFASTGD-GSIVVG-SLDGKIRLYSKTSMRQAKTAFP-GLGSPITHVDVTYDGKWILG-TT 482 (634)
Q Consensus 407 s~V~~~~~g~~y~~~~~fssva~s~d-G~IASG-S~DGtIRLWD~~t~r~akt~L~-GH~d~ItsVdfSpDGk~LlS-S~ 482 (634)
. . -..-..++++++ ++|..+ +..+.|+.+|..+.. ....+. +...| .+|++..+ ....+ ..
T Consensus 168 ~---------~---~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~-~~~~~~~~~~~P-~gi~~~~~-~ly~td~~ 232 (619)
T 3s94_A 168 S---------E---IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGSLPHP-FALTLFED-ILYWTDWS 232 (619)
T ss_dssp S---------S---CSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE-EC---------C-CCEEESSS-EEEEECTT
T ss_pred C---------C---CCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc-cEEEEeCCCCCc-eEEEEeCC-EEEEecCC
Confidence 0 0 011256788865 566555 456789999987642 333333 22333 58888777 44445 67
Q ss_pred CCcEEEEEcc
Q 047036 483 DTYLILICTL 492 (634)
Q Consensus 483 D~tIrLWD~~ 492 (634)
.+.|...|..
T Consensus 233 ~~~V~~~d~~ 242 (619)
T 3s94_A 233 THSILACNKY 242 (619)
T ss_dssp TCSEEEEESS
T ss_pred CCEEEEEECC
Confidence 7889998864
No 351
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=36.82 E-value=1.4e+02 Score=26.39 Aligned_cols=45 Identities=13% Similarity=0.226 Sum_probs=35.6
Q ss_pred eeeeeccccCcccccccceEEEE---e-CcEEEEEcCChHHHHHHHHHHHHhH
Q 047036 137 VRAKVSTEMQLKMFGDQRRIDFV---D-KGVWALKFFSDSEYRKFVTEFQDRL 185 (634)
Q Consensus 137 ~~~~v~~~~~~~~~~~~~~~~f~---~-~~~w~lkF~~~~~~~~F~~~~~~~l 185 (634)
+...|.+.|.+. +.+-.|. . +..|-|-|.+.++-..|..++.+||
T Consensus 64 ~~~~l~~~~~y~----~~~p~Fh~w~~~~~~~GL~F~se~eA~~F~~~v~~al 112 (118)
T 1xod_A 64 LECVLRRDLVYN----KVTPTFHHWRIGDKKFGLTFQSPADARAFDRGIRRAI 112 (118)
T ss_dssp EEEECCTTCEEE----EEETTEEEEEETTEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEE----ecCCcceEEEeCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 888888888764 3333444 2 3499999999999999999999987
No 352
>2llh_A Nucleophosmin; nucleolar, chaperone, oncoprotein, DNA binding protein; NMR {Homo sapiens} PDB: 2vxd_A
Probab=39.51 E-value=9 Score=31.88 Aligned_cols=42 Identities=19% Similarity=0.180 Sum_probs=28.6
Q ss_pred CCCCCCCChHHHHHhhccceecccCCCC--CCCCCceeEEEEec
Q 047036 40 SGTKTLNSLDEVDAKLKSLKLKYSTPQS--PNVKNPVKLYLHIG 81 (634)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 81 (634)
.+|+.|+|++||.||++|---|-.+-+. +...|-||-+.+|.
T Consensus 16 ktPkgpssvedIKaKmqasieKg~slPKvE~KF~NyvKn~F~mt 59 (74)
T 2llh_A 16 KTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMT 59 (74)
Confidence 6788899999999999876555433321 23447777666653
No 353
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=32.97 E-value=1e+02 Score=32.87 Aligned_cols=58 Identities=16% Similarity=0.056 Sum_probs=37.5
Q ss_pred EEEEECCCCeEEEEECCC-cEEEEecccccc-ccccccC------CCCCeEEEEECCC---CCEE-EE-Ec
Q 047036 425 QCFASTGDGSIVVGSLDG-KIRLYSKTSMRQ-AKTAFPG------LGSPITHVDVTYD---GKWI-LG-TT 482 (634)
Q Consensus 425 ssva~s~dG~IASGS~DG-tIRLWD~~t~r~-akt~L~G------H~d~ItsVdfSpD---Gk~L-lS-S~ 482 (634)
.++++.|+|.|.++...| .|++++..+++. ....++. -.....+|+|+|| +.+| ++ +.
T Consensus 30 ~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~ 100 (454)
T 1cru_A 30 HALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTF 100 (454)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred eEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEec
Confidence 478999999888888886 699998643321 1122321 2345789999995 4444 55 53
No 354
>2oqb_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, transcriptional regulati activation domain; 1.69A {Rattus norvegicus}
Probab=31.26 E-value=64 Score=29.05 Aligned_cols=33 Identities=6% Similarity=0.075 Sum_probs=27.2
Q ss_pred cceEEEEeCc-EEEEEcCChHHHHHHHHHHHHhH
Q 047036 153 QRRIDFVDKG-VWALKFFSDSEYRKFVTEFQDRL 185 (634)
Q Consensus 153 ~~~~~f~~~~-~w~lkF~~~~~~~~F~~~~~~~l 185 (634)
-+++.|+.++ +-+|||.+..+|..|.....+|.
T Consensus 73 k~S~litlg~~slLl~Fas~~d~~~F~~~l~k~~ 106 (117)
T 2oqb_A 73 RQSFIITLGCNSVLIQFATPHDFCSFYNILKTCR 106 (117)
T ss_dssp TTEEEEEETTEEEEEECSSHHHHHHHHHHHHHHT
T ss_pred CeEEEEEECCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 4556666665 99999999999999999988774
No 355
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=30.15 E-value=5.2e+02 Score=27.40 Aligned_cols=150 Identities=17% Similarity=0.267 Sum_probs=88.1
Q ss_pred CcceeeEEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCC
Q 047036 306 TPKKALLMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDN 385 (634)
Q Consensus 306 sP~~~mL~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~ 385 (634)
+.+.+++ ++.++.|..-.. ++|.+.|+++-+.+..+..+.+-| .+ .-+++ +.|+.- .+.
T Consensus 68 ~AdsAIM-nP~~~ViALrag-------~~LQiFnletK~klks~~~~e~Vv-fW-kWis~----------~~L~lV-T~t 126 (365)
T 2xzh_A 68 SADSAIM-NPASKVIALKAG-------KTLQIFNIEMKSKMKAHTMTDDVT-FW-KWISL----------NTVALV-TDN 126 (365)
T ss_dssp CCSEEEE-CSSSSEEEEEET-------TEEEEEETTTTEEEEEEECSSCEE-EE-EECSS----------SEEEEE-ESS
T ss_pred ccceeee-CCCccEEEEecC-------CeEEEechHHhhhhcceecCCccE-EE-EecCC----------CeEEEE-cCC
Confidence 3344443 455555554432 689999999999999988876532 22 13343 345443 367
Q ss_pred eEEEEEcCCCCceEEecccCCCCccccccccccccCcceEEEEECCCC-e-EEEEE------CCCcEEEEeccccccccc
Q 047036 386 RLCQWDMRDRSGIVQNMVKGDSPVLHWTQGHQFSRGTNFQCFASTGDG-S-IVVGS------LDGKIRLYSKTSMRQAKT 457 (634)
Q Consensus 386 tIklWD~R~~~~~Vq~l~gh~s~V~~~~~g~~y~~~~~fssva~s~dG-~-IASGS------~DGtIRLWD~~t~r~akt 457 (634)
+|+-|++.....+++.+..|.+- .+.++-.-.++++. . +++|= ..|.|.||.... +..+
T Consensus 127 aVyHWs~~~~s~P~kvFdR~~~L-----------~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ 193 (365)
T 2xzh_A 127 AVYHWSMEGESQPVKMFDRHSSL-----------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQ 193 (365)
T ss_dssp EEEEEESSTTCCCEEEEECCGGG-----------TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT--TEEE
T ss_pred cEEEEcccCCCCCceeeecchhc-----------ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc--cccc
Confidence 99999997655566666655431 12333333445555 2 22332 357899999764 3567
Q ss_pred cccCCCCCeEEEEECCCCC----EEEE-EcC----CcEEEEEc
Q 047036 458 AFPGLGSPITHVDVTYDGK----WILG-TTD----TYLILICT 491 (634)
Q Consensus 458 ~L~GH~d~ItsVdfSpDGk----~LlS-S~D----~tIrLWD~ 491 (634)
.+.||...- ..|-.+|. .|++ ... +.|+|.++
T Consensus 194 ~ieGhaa~F--~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi 234 (365)
T 2xzh_A 194 PIEGHAASF--AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEV 234 (365)
T ss_dssp EECCSEEEE--EEECCTTCSSCEEEEEEEEEETTEEEEEEEEC
T ss_pred eeeeeeeee--EEEecCCCCCCceEEEEEEecCCCcEEEEEEc
Confidence 889996533 44545554 3444 322 46777775
No 356
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=30.02 E-value=1.2e+02 Score=35.08 Aligned_cols=75 Identities=12% Similarity=0.185 Sum_probs=41.6
Q ss_pred EEEEEeCCCeEEEEEcCCCCceEEe-cccCCCC---ccc-cccccccccCcceEEEEECCCCeEEEEECCCcEEEEeccc
Q 047036 377 STFLGLDDNRLCQWDMRDRSGIVQN-MVKGDSP---VLH-WTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTS 451 (634)
Q Consensus 377 ~laSGS~D~tIklWD~R~~~~~Vq~-l~gh~s~---V~~-~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t 451 (634)
.++.+..||.+-..+-..... ... +-.+.++ +.. |...+.-..+..++|+.+ ++.+|++=+.|.++|+||+.+
T Consensus 173 ~liVsL~DGGLLrL~r~~~~d-~~~~~Fnd~s~l~SL~~lf~~~~~~~~~~~Is~~~~-~~~fLftL~~Dh~LRiWsL~t 250 (729)
T 3f7f_A 173 FSVVFLEDGGLLGLKKVDGVH-YEPLLFNDNSYLKCLTRFFSRSSKSDYDSVISCKLF-HERYLIVLTQNCHLKIWDLTS 250 (729)
T ss_dssp BEEEEETTSCEECCEESSSSC-EECCCCCCCGGGGGGSTTCCTTCSSCCCCEEEEEEE-TTTEEEEEETTCEEEEEETTT
T ss_pred eEEEEEcCCCEEEEEeccCCC-cceeeecCCchhhhhHHhhcCCCCCCcCceEEEecc-CCcEEEEEEcCCeEEEEEcCC
Confidence 488888888887776433221 111 1111111 111 221111122333555443 466999999999999999988
Q ss_pred cc
Q 047036 452 MR 453 (634)
Q Consensus 452 ~r 453 (634)
++
T Consensus 251 ~~ 252 (729)
T 3f7f_A 251 FT 252 (729)
T ss_dssp TE
T ss_pred Cc
Confidence 64
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=29.26 E-value=1.6e+02 Score=35.26 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=24.3
Q ss_pred EEeCCcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEe
Q 047036 312 LMRGETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWK 350 (634)
Q Consensus 312 L~~~D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lk 350 (634)
....+...|++=+-| ++||+|++.+|+++.+..
T Consensus 244 ~~~~~~~~lftL~~D------~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 244 IFLSTYNVLVMLSLD------YKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp EEETTTTEEEEEBTT------CEEEEEETTTTEEEEEEE
T ss_pred eccCCccEEEEEeCC------CEEEEEECCCCCeEEeec
Confidence 344555666555554 799999999999999864
No 358
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=26.77 E-value=4.4e+02 Score=25.39 Aligned_cols=30 Identities=10% Similarity=0.126 Sum_probs=17.7
Q ss_pred CcceEEecCCC---CCCCCCCcEEEEeCCCCcE
Q 047036 316 ETNMMLMSPLK---DGKPQAPGVQQLDIETGKI 345 (634)
Q Consensus 316 D~~mllsss~d---~~~~~~~TIrlWDleTGK~ 345 (634)
+..+++.++.+ ......+.+.++|+.+++-
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 45677777651 1111124699999998753
No 359
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=26.24 E-value=1.9e+02 Score=33.46 Aligned_cols=30 Identities=7% Similarity=0.105 Sum_probs=23.8
Q ss_pred CCCCCEEEE-EcCCcEEEEEcccccCCCCeeeeec
Q 047036 472 TYDGKWILG-TTDTYLILICTLFSDKDGKTKTGFS 505 (634)
Q Consensus 472 SpDGk~LlS-S~D~tIrLWD~~~~~~~G~~~~gF~ 505 (634)
.++..+|++ |.|.+||+|++. +|+++....
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~----t~~lv~t~D 258 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLT----SFTLIQDYD 258 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETT----TTEEEEEEE
T ss_pred ccCCcEEEEEEcCCeEEEEEcC----CCceEEeec
Confidence 445789999 999999999986 677765443
No 360
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=23.91 E-value=3.8e+02 Score=25.46 Aligned_cols=69 Identities=10% Similarity=0.096 Sum_probs=37.2
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC-----CeEEEE
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD-----NRLCQW 390 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D-----~tIklW 390 (634)
+..+++.++.+.. .....+..+|+.+++-...=........-.++.+ + +.+++.|+.+ +.|.++
T Consensus 159 ~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--------~~i~v~GG~~~~~~~~~v~~y 227 (301)
T 2vpj_A 159 SGVIYCLGGYDGL-NILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--N--------DHIYVVGGFDGTAHLSSVEAY 227 (301)
T ss_dssp TTEEEEECCBCSS-CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T--------TEEEEECCBCSSSBCCCEEEE
T ss_pred CCEEEEECCCCCC-cccceEEEEeCCCCcEEeCCCCCcccccceEEEE--C--------CEEEEEeCCCCCcccceEEEE
Confidence 5567777775432 1235699999998754332000110000011111 2 3567777664 578999
Q ss_pred EcCCC
Q 047036 391 DMRDR 395 (634)
Q Consensus 391 D~R~~ 395 (634)
|+++.
T Consensus 228 d~~~~ 232 (301)
T 2vpj_A 228 NIRTD 232 (301)
T ss_dssp ETTTT
T ss_pred eCCCC
Confidence 99864
No 361
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=23.10 E-value=4.9e+02 Score=24.73 Aligned_cols=67 Identities=6% Similarity=0.065 Sum_probs=36.1
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCCcEEEE--EeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCC-----CeEE
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTE--WKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDD-----NRLC 388 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~--lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D-----~tIk 388 (634)
+..+++.++.+... .-+.+.++|+.+++-... +...... -.++.+ + +.+.+.|+.+ +.+.
T Consensus 61 ~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~~~--~--------~~iyv~GG~~~~~~~~~~~ 127 (302)
T 2xn4_A 61 AGLVFAVGGFNGSL-RVRTVDSYDPVKDQWTSVANMRDRRST--LGAAVL--N--------GLLYAVGGFDGSTGLSSVE 127 (302)
T ss_dssp TTEEEEESCBCSSS-BCCCEEEEETTTTEEEEECCCSSCCBS--CEEEEE--T--------TEEEEEEEECSSCEEEEEE
T ss_pred CCEEEEEeCcCCCc-cccceEEECCCCCceeeCCCCCccccc--eEEEEE--C--------CEEEEEcCCCCCccCceEE
Confidence 55677777754321 224699999998763322 1111111 012121 2 3566677655 3678
Q ss_pred EEEcCCC
Q 047036 389 QWDMRDR 395 (634)
Q Consensus 389 lWD~R~~ 395 (634)
++|+.+.
T Consensus 128 ~~d~~~~ 134 (302)
T 2xn4_A 128 AYNIKSN 134 (302)
T ss_dssp EEETTTT
T ss_pred EEeCCCC
Confidence 8898764
No 362
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=22.85 E-value=5.2e+02 Score=24.88 Aligned_cols=29 Identities=17% Similarity=0.103 Sum_probs=18.2
Q ss_pred CcceEEecCCC--CCCCCCCcEEEEeCCCCc
Q 047036 316 ETNMMLMSPLK--DGKPQAPGVQQLDIETGK 344 (634)
Q Consensus 316 D~~mllsss~d--~~~~~~~TIrlWDleTGK 344 (634)
+..+++.++.+ ++...-..+.++|+.+++
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~ 128 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFK 128 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCc
Confidence 45677777732 111223569999999875
No 363
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=21.61 E-value=1.1e+03 Score=28.32 Aligned_cols=133 Identities=12% Similarity=0.145 Sum_probs=73.6
Q ss_pred CcEEEEeCCCCcEEE-EEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCCeEEEEEcCCCCceEEecccCCCCccc
Q 047036 333 PGVQQLDIETGKIVT-EWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDNRLCQWDMRDRSGIVQNMVKGDSPVLH 411 (634)
Q Consensus 333 ~TIrlWDleTGK~V~-~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~tIklWD~R~~~~~Vq~l~gh~s~V~~ 411 (634)
++|++||+...+.++ +-..+.. | .++.+... ++.++.|---+.|.+.-.+.....+..+..+
T Consensus 904 ~~l~vy~l~~~~~L~~~~~~~~~-i--~~~~l~~~--------~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D------ 966 (1158)
T 3ei3_A 904 STVRLYEWTTEKELRTECNHYNN-I--MALYLKTK--------GDFILVGDLMRSVLLLAYKPMEGNFEEIARD------ 966 (1158)
T ss_dssp TEEEEEEECTTSCEEEEEEECCC-S--CEEEEEEE--------TTEEEEEESSBCEEEEEEETTTTEEEEEEEC------
T ss_pred CEEEEEECCCCceEEEEeecccc-E--EEEEEecc--------CCEEEEEEhhheEEEEEEEcCCCeEEEEEee------
Confidence 479999998766555 2111221 1 12233222 4688888877777765443222222333211
Q ss_pred cccccccccCcceEEEEECCCCeEEEEECCCcEEEEecccc-------ccccc--cccCCCCCeEEEE---ECCCC----
Q 047036 412 WTQGHQFSRGTNFQCFASTGDGSIVVGSLDGKIRLYSKTSM-------RQAKT--AFPGLGSPITHVD---VTYDG---- 475 (634)
Q Consensus 412 ~~~g~~y~~~~~fssva~s~dG~IASGS~DGtIRLWD~~t~-------r~akt--~L~GH~d~ItsVd---fSpDG---- 475 (634)
+ ....++|+++-.++.++.|-.+|.|.+...... ++... .| -.++.|+++. +.+.+
T Consensus 967 ------~-~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~f-hlG~~vt~~~~~sl~~~~~~~~ 1038 (1158)
T 3ei3_A 967 ------F-NPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLF-HLGEFVNVFCHGSLVMQNLGET 1038 (1158)
T ss_dssp ------C-SCBCEEEEEEEETTEEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEE-ECSSCEEEEEECCSCCC-----
T ss_pred ------c-ccccEEEEEEEccCcEEEEcCCCcEEEEecCCCCCCccccceeeeEEEE-eCCCcEeeEEeeeeecCCCccc
Confidence 1 122356777766778899999999998865321 00111 11 2578888886 34433
Q ss_pred ----C--EEEEEcCCcEEEEE
Q 047036 476 ----K--WILGTTDTYLILIC 490 (634)
Q Consensus 476 ----k--~LlSS~D~tIrLWD 490 (634)
+ .|.+|.+++|-+.-
T Consensus 1039 ~~~~~~~il~~T~~GsIg~l~ 1059 (1158)
T 3ei3_A 1039 STPTQGSVLFGTVNGMIGLVT 1059 (1158)
T ss_dssp --CEEEEEEEEETTSCEEEEE
T ss_pred cccccceEEEEecCCEEEEEE
Confidence 1 34447788877664
No 364
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=21.01 E-value=5e+02 Score=24.98 Aligned_cols=70 Identities=4% Similarity=-0.069 Sum_probs=36.0
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCCcEEEEEeccCCCcceeEEEEecCCCCCCCCCCCEEEEEeCCC-----eEEEE
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETGKIVTEWKFEKDGTDITMRDITNDTKSSQLDPSESTFLGLDDN-----RLCQW 390 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTGK~V~~lkgH~~~V~I~vvsfsPd~K~~q~~~g~~laSGS~D~-----tIklW 390 (634)
+..+++.++.+.....-..+.++|+.+.+-...=........-.+ ... + +.+++.|+.++ .+.++
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~~~-~--------~~iyv~GG~~~~~~~~~~~~y 217 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGA-TVH-D--------GRIIVAAGVTDTGLTSSAEVY 217 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEE-EEE-T--------TEEEEEEEECSSSEEEEEEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEE-EEE-C--------CEEEEEeccCCCCccceEEEE
Confidence 445777777632222335799999998753221000000000011 111 2 45677776543 58888
Q ss_pred EcCCC
Q 047036 391 DMRDR 395 (634)
Q Consensus 391 D~R~~ 395 (634)
|+.+.
T Consensus 218 d~~~~ 222 (315)
T 4asc_A 218 SITDN 222 (315)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 98764
No 365
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=20.37 E-value=6.9e+02 Score=25.40 Aligned_cols=153 Identities=13% Similarity=0.116 Sum_probs=81.6
Q ss_pred CCeEEEEECCCcEEEEecccccc----cc--ccccCCCCCeEEEEECCCCCEEEE-EcCCcEEEEEcc--cccCCCCeee
Q 047036 432 DGSIVVGSLDGKIRLYSKTSMRQ----AK--TAFPGLGSPITHVDVTYDGKWILG-TTDTYLILICTL--FSDKDGKTKT 502 (634)
Q Consensus 432 dG~IASGS~DGtIRLWD~~t~r~----ak--t~L~GH~d~ItsVdfSpDGk~LlS-S~D~tIrLWD~~--~~~~~G~~~~ 502 (634)
+.+++.++..|.||--.+...+. .+ ..|.. ++.+.++........|+. |..+.+..+.+. .....|+.-.
T Consensus 109 e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~ 187 (327)
T 3uc1_A 109 APYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATS 187 (327)
T ss_dssp SSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSB
T ss_pred CCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCC
Confidence 45899999999999887654321 11 13443 577877777666667776 888888887754 1111121111
Q ss_pred eecCCCCCCCCCceeEeecCCCccccCCCcccccccccccccCCCCceEEEEEcCCeEEEEeChhhhcccccccccccCC
Q 047036 503 GFSGRMGNKIPAPRLLKLTPLDSHLAGTDNKIHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGL 582 (634)
Q Consensus 503 gF~gh~~~~~p~pr~L~L~Pe~~~~~g~~i~Ft~a~Fs~~t~~g~~E~~IvtStg~~viiWdl~~v~~~~~~~y~~~~~~ 582 (634)
| .+.++|.+++... .+... . .....++.+..+++..-.+....... .|.
T Consensus 188 ------G-----v~~i~L~~~d~Vv-----~~~~~--~------~~~~ll~~T~~G~~Krt~l~e~~~~~-------R~~ 236 (327)
T 3uc1_A 188 ------G-----VQGMRFNIDDRLL-----SLNVV--R------EGTYLLVATSGGYAKRTAIEEYPVQG-------RGG 236 (327)
T ss_dssp ------C-----EESSCCCTTCCEE-----EEEEC--C------TTCEEEEEETTSEEEEEEGGGSCBCC-------TTS
T ss_pred ------C-----eeeecCCCCCEEE-----EEEEE--C------CCCEEEEEeCCCcEEEEEHHHccccC-------cCC
Confidence 1 1234455544321 11111 1 11245666777888877776544321 122
Q ss_pred cceeeEEEeccCCCeeeeccccCccccCCCCCCCEEEEcCCc
Q 047036 583 KSCYCYKIVLKDESIVESRFMHDKFAVTDSPEAPLVVATPMK 624 (634)
Q Consensus 583 ~~~~~Y~i~~~~~~i~~~~f~~d~f~~~~~~~~~iivA~~~~ 624 (634)
+--..+++...++.++.+... . .+..|+++|.+-
T Consensus 237 ~G~~~~~l~~~~d~lv~~~~~------~--~~~~i~l~T~~G 270 (327)
T 3uc1_A 237 KGVLTVMYDRRRGRLVGALIV------D--DDSELYAVTSGG 270 (327)
T ss_dssp CCEESSCCCTTTCSEEEEEEE------C--TTCEEEEEEGGG
T ss_pred CcEEEEEecCCCCeEEEEEEe------C--CCccEEEEcCCC
Confidence 333344565545667754431 1 234677666543
No 366
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=20.05 E-value=5.3e+02 Score=24.86 Aligned_cols=30 Identities=13% Similarity=0.078 Sum_probs=18.6
Q ss_pred CcceEEecCCCCCCCCCCcEEEEeCCCCcE
Q 047036 316 ETNMMLMSPLKDGKPQAPGVQQLDIETGKI 345 (634)
Q Consensus 316 D~~mllsss~d~~~~~~~TIrlWDleTGK~ 345 (634)
++.+++.++.+.....-..+.++|+.+++-
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 556777776432111224699999998753
Done!