Query 047041
Match_columns 91
No_of_seqs 127 out of 716
Neff 6.2
Searched_HMMs 13730
Date Mon Mar 25 12:06:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047041.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047041hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2v33a1 b.1.18.4 (A:293-382) F 55.5 1.7 0.00013 25.5 0.8 22 68-89 19-40 (90)
2 d2gsva1 a.23.7.1 (A:3-69) Hypo 44.1 4.5 0.00033 22.1 1.3 9 51-59 26-34 (67)
3 d1wqji1 g.1.1.1 (I:2-63) Insul 33.8 26 0.0019 18.7 3.5 17 12-28 6-22 (62)
4 d2dlka1 g.37.1.1 (A:8-37) Zinc 32.7 7.1 0.00051 18.0 0.8 12 66-77 2-13 (30)
5 d1pb5a_ g.65.1.1 (A:) Neurogen 30.7 3.8 0.00027 19.9 -0.4 12 20-31 24-35 (35)
6 d2v5pc1 g.1.1.1 (C:6-63) Insul 27.3 32 0.0023 18.1 3.1 17 12-28 5-21 (58)
7 d1nkza_ f.3.1.1 (A:) Light-har 20.0 3.7 0.00027 21.7 -1.9 13 1-13 5-17 (53)
8 d1ijda_ f.3.1.1 (A:) Light-har 19.6 3.1 0.00023 21.4 -2.2 13 1-13 5-17 (46)
9 d1iq0a1 a.27.1.1 (A:467-592) A 13.9 42 0.0031 19.3 1.8 25 46-70 66-90 (126)
10 d1mz4a_ a.3.1.1 (A:) Cytochrom 12.5 65 0.0047 17.8 2.3 17 9-25 106-122 (131)
No 1
>d2v33a1 b.1.18.4 (A:293-382) Fusion glycoprotein E1 {Semliki forest virus [TaxId: 11033]}
Probab=55.47 E-value=1.7 Score=25.51 Aligned_cols=22 Identities=14% Similarity=0.185 Sum_probs=17.5
Q ss_pred cCCcceEEeecCCCCCceeeec
Q 047041 68 YFHAAAMITDLDPSHRSCKFEY 89 (91)
Q Consensus 68 dF~G~a~i~~~~ps~~~C~~~~ 89 (91)
||+|.|+|+......|.|..++
T Consensus 19 DfGGvatl~Y~a~k~GkCaVHs 40 (90)
T d2v33a1 19 DFGGVLTLTYKTNKNGDCSVHS 40 (90)
T ss_dssp EEEEEEEEEEEESSCEEEEEEC
T ss_pred CcCCeEEEEEecCCCccceeEc
Confidence 8999999997655558887764
No 2
>d2gsva1 a.23.7.1 (A:3-69) Hypothetical protein YvfG {Bacillus subtilis [TaxId: 1423]}
Probab=44.07 E-value=4.5 Score=22.10 Aligned_cols=9 Identities=44% Similarity=0.862 Sum_probs=7.7
Q ss_pred HHHHHHHHH
Q 047041 51 YAFNDYYQK 59 (91)
Q Consensus 51 ya~N~YYq~ 59 (91)
-|||+||..
T Consensus 26 hAmNaYYrs 34 (67)
T d2gsva1 26 HAMNSYYRS 34 (67)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 489999986
No 3
>d1wqji1 g.1.1.1 (I:2-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.75 E-value=26 Score=18.70 Aligned_cols=17 Identities=41% Similarity=0.702 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhccCcc
Q 047041 12 DDELQMALDWACGKGGA 28 (91)
Q Consensus 12 ~~~l~~~l~~aCg~~~~ 28 (91)
...|-++|-++||.-|.
T Consensus 6 Gs~LvdaL~~VCG~rGf 22 (62)
T d1wqji1 6 GAELVDALQFVCGDRGF 22 (62)
T ss_dssp HHHHHHHHHHHHGGGCB
T ss_pred hHHHHHHHHHHHccCCC
Confidence 46788999999997443
No 4
>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.72 E-value=7.1 Score=17.99 Aligned_cols=12 Identities=25% Similarity=0.468 Sum_probs=9.6
Q ss_pred cccCCcceEEee
Q 047041 66 TCYFHAAAMITD 77 (91)
Q Consensus 66 aCdF~G~a~i~~ 77 (91)
.|||.|-+.|-+
T Consensus 2 ~cdf~gc~kifs 13 (30)
T d2dlka1 2 PCDFPGCGRIFS 13 (30)
T ss_dssp ECSSTTTCCEES
T ss_pred CCCCCCchhhhc
Confidence 499999888754
No 5
>d1pb5a_ g.65.1.1 (A:) Neurogenic locus notch homolog protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.72 E-value=3.8 Score=19.85 Aligned_cols=12 Identities=50% Similarity=1.185 Sum_probs=8.3
Q ss_pred HHHhccCccccc
Q 047041 20 DWACGKGGADCN 31 (91)
Q Consensus 20 ~~aCg~~~~dC~ 31 (91)
+.|||..+.||+
T Consensus 24 nhaCgWDgGDCS 35 (35)
T d1pb5a_ 24 NHACGWDGGDCS 35 (35)
T ss_dssp STTTTGGGGSCC
T ss_pred ccccCCCCCCCC
Confidence 357777777775
No 6
>d2v5pc1 g.1.1.1 (C:6-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.28 E-value=32 Score=18.14 Aligned_cols=17 Identities=35% Similarity=0.675 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhccCcc
Q 047041 12 DDELQMALDWACGKGGA 28 (91)
Q Consensus 12 ~~~l~~~l~~aCg~~~~ 28 (91)
...|-++|-++||.-|.
T Consensus 5 Gs~LVdaL~~VCg~rGf 21 (58)
T d2v5pc1 5 GGELVDTLQFVCGDRGF 21 (58)
T ss_dssp THHHHHHHHHHSTTSCB
T ss_pred hHHHHHHHHHHHcCCCc
Confidence 35788999999997543
No 7
>d1nkza_ f.3.1.1 (A:) Light-harvesting complex subunits {Purple bacterium (Rhodoblastus acidophilus) [TaxId: 1074]}
Probab=20.02 E-value=3.7 Score=21.73 Aligned_cols=13 Identities=8% Similarity=0.169 Sum_probs=9.0
Q ss_pred CeeeeeCCCCCHH
Q 047041 1 MEWCIADGQTPDD 13 (91)
Q Consensus 1 ~~wCV~~~~~~~~ 13 (91)
|.|+|+||.+-..
T Consensus 5 kiW~VV~PtVG~P 17 (53)
T d1nkza_ 5 KIWTVVNPAIGIP 17 (53)
T ss_dssp TGGGTSCHHHHHH
T ss_pred eEEEEECCCcCch
Confidence 4688888876443
No 8
>d1ijda_ f.3.1.1 (A:) Light-harvesting complex subunits {Rhodoblastus acidophilus [TaxId: 1074]}
Probab=19.55 E-value=3.1 Score=21.43 Aligned_cols=13 Identities=8% Similarity=0.049 Sum_probs=9.3
Q ss_pred CeeeeeCCCCCHH
Q 047041 1 MEWCIADGQTPDD 13 (91)
Q Consensus 1 ~~wCV~~~~~~~~ 13 (91)
|.|+|+||.+-..
T Consensus 5 kiW~VV~PtvG~P 17 (46)
T d1ijda_ 5 KIWTVVPPAFGLP 17 (46)
T ss_dssp GGGGTSCHHHHHH
T ss_pred eEEEEECCCcCch
Confidence 4699999876543
No 9
>d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]}
Probab=13.91 E-value=42 Score=19.33 Aligned_cols=25 Identities=12% Similarity=0.118 Sum_probs=17.1
Q ss_pred hhhHhHHHHHHHHHhcCCCccccCC
Q 047041 46 RDHASYAFNDYYQKFKHQGATCYFH 70 (91)
Q Consensus 46 ~~~~Sya~N~YYq~~~~~~~aCdF~ 70 (91)
...++=+||.||+..+-....+.+.
T Consensus 66 l~~La~~F~~fY~~~~~~~~~~~i~ 90 (126)
T d1iq0a1 66 LLDLAASWNAYYNARENGQPATPVL 90 (126)
T ss_dssp HHHHHHHHHHHHHCEETTEESSCST
T ss_pred HHHHHHHHHHHHHhccccccccccc
Confidence 3457889999999776555555443
No 10
>d1mz4a_ a.3.1.1 (A:) Cytochrome c550 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=12.48 E-value=65 Score=17.83 Aligned_cols=17 Identities=6% Similarity=0.005 Sum_probs=14.4
Q ss_pred CCCHHHHHHHHHHHhcc
Q 047041 9 QTPDDELQMALDWACGK 25 (91)
Q Consensus 9 ~~~~~~l~~~l~~aCg~ 25 (91)
++++++|.+++.|+=.+
T Consensus 106 ~Lsdeei~av~aYi~~~ 122 (131)
T d1mz4a_ 106 NLTEKDLVAIAGHILVE 122 (131)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhc
Confidence 48999999999998654
Done!