BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047042
(283 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA
PE=2 SV=1
Length = 307
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 115 QERKKGVAWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYFLRLASDL 174
QERKKGV WTEEEH+ FLMGL+K GKGDWR ISR FV TRTPTQVASHAQKYF+R S
Sbjct: 126 QERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSG- 184
Query: 175 NKKKRRSSLFDMIGI 189
K KRR+S+ D+ +
Sbjct: 185 GKDKRRASIHDITTV 199
>sp|Q2V9B0|MY1R1_SOLTU Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1
Length = 297
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 94/158 (59%), Gaps = 43/158 (27%)
Query: 23 AVGGGGGGGSSLRLFGVQL-IDVSSSSPSSSSSSSIAMSLKKSFSMDCLSSAAVPSSSSS 81
AV GGG GG + LFGV++ +D ++KS S++ LS P+++++
Sbjct: 14 AVTGGGFGGE-IMLFGVRVKVD----------------PMRKSVSLNDLSQYEHPNANNN 56
Query: 82 N------SSSLVSIDEDKTAVGYLS-DGLIMIPPTSNHQHQ-----ERKKGVAWTEEEHR 129
N SS V+ DE GY S D + QHQ ERK+GV WTEEEH+
Sbjct: 57 NNGGDNNESSKVAQDE-----GYASADDAV--------QHQSNSGRERKRGVPWTEEEHK 103
Query: 130 KFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYF 167
FL+GL+K+GKGDWRGISR FV TRTPTQVASHAQKYF
Sbjct: 104 LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 141
>sp|Q869R9|MYBJ_DICDI Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1
Length = 734
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 7/70 (10%)
Query: 122 AWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYFLRLASDLNKKKRRS 181
WT+EEH +FL G++ GKG W+ I++ FV TRTPTQ+ SHAQKY+LR + K +RS
Sbjct: 378 GWTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQE--TKNKRS 434
Query: 182 ----SLFDMI 187
SL D+I
Sbjct: 435 IHDLSLQDLI 444
>sp|Q54HX6|MYBI_DICDI Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1
Length = 977
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 113 QHQERKKGVAWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYFLRLAS 172
Q +++K+ WT EEH +F+ L K G D + IS ++VSTR PTQV +HAQKYFLR+
Sbjct: 165 QSEKKKQSRYWTPEEHSRFIEALSKYGHKDVKSIS-QYVSTRNPTQVRTHAQKYFLRIDR 223
Query: 173 DLNKK 177
+ +K
Sbjct: 224 ERGRK 228
>sp|Q6R0H0|ASG4_ARATH Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1
Length = 287
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 123 WTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYFLRLASD 173
WTE+EH KFL L L DW+ I + FV ++T Q+ SHAQKYFL++ +
Sbjct: 64 WTEQEHDKFLEALH-LFDRDWKKI-KAFVGSKTVIQIRSHAQKYFLKVQKN 112
>sp|Q54IF9|MYBG_DICDI Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1
Length = 423
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 118 KKGVAWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYFLRL 170
K+ WT+EEH+KFL L + DW+ I FV ++T Q+ SHAQKYF+++
Sbjct: 39 KQRENWTDEEHQKFLEALTLFDR-DWKKI-ESFVGSKTVIQIRSHAQKYFIKV 89
>sp|Q54Z40|MYBH_DICDI Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1
Length = 1217
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 120 GVAWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYFLRLA 171
W+ EEH FL +EK G+G+W+ IS + +R Q+ +HA+ YF +++
Sbjct: 229 NTPWSNEEHELFLKAIEKYGRGNWKLIS-TLIKSRNTLQIKNHARIYFDKIS 279
Score = 38.9 bits (89), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 122 AWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYFLRL 170
+WT+EE R F+ KL D + I ++ V T+T QV SHAQK+ L+L
Sbjct: 152 SWTKEEERLFVEAY-KLYDKDNKKI-QEHVKTKTILQVRSHAQKFALKL 198
>sp|P92973|CCA1_ARATH Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1
Length = 608
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 123 WTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYFLRLASDLNKK 177
WTEEEH +F+ L G+ W+ I + V+T+T Q+ SHAQK+F ++ + K
Sbjct: 27 WTEEEHNRFIEALRLYGRA-WQKI-EEHVATKTAVQIRSHAQKFFSKVEKEAEAK 79
>sp|Q6R0H1|LHY_ARATH Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2
Length = 645
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 123 WTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYFLRL 170
WTE+EH +FL L G+ W+ I + + T+T Q+ SHAQK+F +L
Sbjct: 27 WTEDEHERFLEALRLYGRA-WQRI-EEHIGTKTAVQIRSHAQKFFTKL 72
>sp|Q86HX9|MYBK_DICDI Myb-like protein K OS=Dictyostelium discoideum GN=mybK PE=3 SV=1
Length = 894
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 123 WTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYF 167
WT EEH KFL +++ G D+ I+ KFV TR QV +H Y
Sbjct: 657 WTSEEHNKFLEAVQQFGIKDYHAIA-KFVQTRNHHQVRTHVNTYL 700
>sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1
Length = 828
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 121 VAWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYF 167
V WT EE F GL K G+ W IS K + +RT QV S+A++YF
Sbjct: 119 VKWTIEEKELFEQGLAKFGRR-WTKIS-KLIGSRTVLQVKSYARQYF 163
>sp|Q5RGA4|MYSM1_DANRE Histone H2A deubiquitinase MYSM1 OS=Danio rerio GN=mysm1 PE=2 SV=2
Length = 822
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 123 WTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYF 167
W EEE F GL + G+ W I+ K + TRT QV S+A++YF
Sbjct: 102 WAEEEKELFEKGLAQFGRR-WTKIA-KLIGTRTVLQVKSYAKQYF 144
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 117 RKKGVAWTEEEHRKFLMGLEKLGKGDWRGISRKF-----VSTRTPTQVASHAQKYFLRLA 171
+K V W++E H+KF+ +++LG + + +K + T VASH QKY L L
Sbjct: 193 KKPRVVWSQELHQKFVSAVQQLGLD--KAVPKKILDLMSIEGLTRENVASHLQKYRLYLK 250
Query: 172 SDLNKKKRRSSLFDMIGIRSSMAAVHHRQVNSSSKQEEQPIRDESAAR 219
+++ ++++ D G R S + Q++ +RD +AAR
Sbjct: 251 K-IDEGQQQNMTPDAFGTRDS-SYFQMAQLDG--------LRDFTAAR 288
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 116 ERKKGVAWTEEEHRKFLMGLEKLGKGDWRGISRKF-----VSTRTPTQVASHAQKYFLRL 170
++K+ V WT E H+KF+ + +LG + + +K V T VASH QK+ L L
Sbjct: 193 QKKQRVVWTVELHKKFVAAVNQLGYE--KAMPKKILDLMNVEKLTRENVASHLQKFRLYL 250
Query: 171 ASDLNKKKRRSSLFDMIGIRSSMAAVHHRQVNSSSKQEEQPI 212
KR S + + I ++ + +H Q+N +PI
Sbjct: 251 -------KRISGVANQQAIMAN-SELHFMQMNGLDGFHHRPI 284
>sp|Q5F3F2|MYSM1_CHICK Histone H2A deubiquitinase MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
SV=1
Length = 832
Score = 38.1 bits (87), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 121 VAWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYF 167
+ WT EE F GL K G+ W I+ K + +RT QV S+A++YF
Sbjct: 120 LKWTSEEKELFEQGLVKYGRR-WTKIA-KLIGSRTVLQVKSYARQYF 164
>sp|Q69Z66|MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 OS=Mus musculus GN=Mysm1 PE=2 SV=2
Length = 819
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 121 VAWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYF 167
V WT EE F GL K G+ W I+ + +RT QV S+A++YF
Sbjct: 116 VKWTVEEKELFEQGLAKFGRR-WTKIA-TLLKSRTVLQVKSYARQYF 160
>sp|Q54K19|MYBD_DICDI Myb-like protein D OS=Dictyostelium discoideum GN=mybD PE=3 SV=1
Length = 595
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 118 KKGVAWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYFLRLA 171
+K WT+EE K K GK W+ I F +T QV SH Q Y +R+
Sbjct: 438 RKNAIWTQEEDEKMAQLYNKYGKS-WKAIHSHF-DDKTREQVQSHGQ-YLIRIG 488
>sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2
SV=1
Length = 420
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 123 WTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYFL 168
WT E + L +E+ G G+W ++ ++RTPT+V H ++
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPTEVMEHYVTMYI 115
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 36.2 bits (82), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 116 ERKKGVAWTEEEHRKFLMGLEKLGKGDWRGISRKF-----VSTRTPTQVASHAQKYFLRL 170
++K V WT E H KFL ++ LG R + +K V T VASH QK+ + L
Sbjct: 181 QKKPRVLWTHELHNKFLAAVDHLGVE--RAVPKKILDLMNVDKLTRENVASHLQKFRVAL 238
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 116 ERKKGVAWTEEEHRKFLMGLEKLGKGDWRGISRKF-----VSTRTPTQVASHAQKY 166
++K V WT E HRKF+ +E+LG + + + V + T VASH QKY
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVD--KAVPSRILEIMNVKSLTRHNVASHLQKY 198
>sp|A0JMR6|MYSM1_XENLA Histone H2A deubiquitinase MYSM1 OS=Xenopus laevis GN=mysm1 PE=2
SV=1
Length = 818
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 121 VAWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYF 167
V WT+EE F GL G+ W I+R + +R+ QV ++A+ YF
Sbjct: 110 VKWTKEEKNLFEQGLATFGRR-WTSIAR-LIGSRSVLQVKNYARHYF 154
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 114 HQERKKGVAWTEEEHRKFLMGLEKLGKGDW---RGISRKFVSTRTPTQVASHAQKY 166
H +RK V WT E HR+F+ +E+LG R + + T +ASH QKY
Sbjct: 211 HGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKY 266
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 118 KKGVAWTEEEHRKFLMGLEKLGKGDW---RGISRKFVSTRTPTQVASHAQKY 166
+K V WT E H+KF+ +E+LG R + V T T VASH QK+
Sbjct: 296 RKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKF 347
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 118 KKGVAWTEEEHRKFLMGLEKLGKGDWRGISRKF-----VSTRTPTQVASHAQKYFLRL 170
K + WT + HR+F+ + LG+ + + +K V T QVASH QKY ++L
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLGED--KAVPKKILGIMKVKHLTREQVASHLQKYRMQL 253
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 118 KKGVAWTEEEHRKFLMGLEKLGKGDWRGISRKF-----VSTRTPTQVASHAQKYFLRL 170
K + WT + HR+F+ + LG+ + + +K V T QVASH QKY ++L
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLGED--KAVPKKILGIMKVKHLTREQVASHLQKYRMQL 253
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 34.7 bits (78), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 116 ERKKGVAWTEEEHRKFLMGLEKLGKGDW---RGISRKFVSTRTPTQVASHAQKY 166
+RK V WT E HR+F+ +E+LG R + V T VASH QKY
Sbjct: 151 KRKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKY 204
>sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1
Length = 420
Score = 34.3 bits (77), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 122 AWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASH 162
WT E + L +E+ G G+W ++ ++RTP +V H
Sbjct: 69 GWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEH 109
>sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2
Length = 420
Score = 34.3 bits (77), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 122 AWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASH 162
WT E + L +E+ G G+W ++ ++RTP +V H
Sbjct: 69 GWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEH 109
>sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1
Length = 486
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 122 AWTEEEHRKFLMGLEKLGKGDWRGISRKFVSTRTPTQVASHAQKYFL 168
WT E + L +E+ G G+W ++ ++RTP +V H ++
Sbjct: 69 GWTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSMYI 115
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 121 VAWTEEEHRKFLMGLEKLGKGDW---RGISRKFVSTRTPTQVASHAQKY 166
V WT E HR+F+ +E+LG R + + + T +ASH QKY
Sbjct: 183 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKY 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.124 0.343
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,048,912
Number of Sequences: 539616
Number of extensions: 3987125
Number of successful extensions: 32657
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 217
Number of HSP's that attempted gapping in prelim test: 25329
Number of HSP's gapped (non-prelim): 3872
length of query: 283
length of database: 191,569,459
effective HSP length: 116
effective length of query: 167
effective length of database: 128,974,003
effective search space: 21538658501
effective search space used: 21538658501
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)