BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047043
(314 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 140/273 (51%), Gaps = 23/273 (8%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFR-SFDSE 88
+R S ++Q A++ F+ N+LG G FG VYKG L+DG VA+K K + + F +E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSH---NYFLDTLERLNIM 145
E++ HRNLL++ C P + LV M NGS+ + L LD +R I
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L YLH H I+H D+K +NILLDE A V DFG++KL+ D +D
Sbjct: 146 LGSARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDXHVXXAV 203
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTG- 264
TIG++AP ++ S G S K DV+ +GV+L+E TG++ D
Sbjct: 204 RGTIGHIAP-------------EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 250
Query: 265 --EISLKNWVNESLPH-ALTDVVDANLRVSMKD 294
++ L +WV L L +VD +L+ + KD
Sbjct: 251 DDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKD 283
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 138/273 (50%), Gaps = 23/273 (8%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFR-SFDSE 88
+R S ++Q A++ F N+LG G FG VYKG L+DG VA+K K + + F +E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSH---NYFLDTLERLNIM 145
E++ HRNLL++ C P + LV M NGS+ + L LD +R I
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L YLH H I+H D+K +NILLDE A V DFG++KL+ D +D
Sbjct: 138 LGSARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDXHVXXAV 195
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTG- 264
IG++AP ++ S G S K DV+ +GV+L+E TG++ D
Sbjct: 196 RGXIGHIAP-------------EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 242
Query: 265 --EISLKNWVNESLPH-ALTDVVDANLRVSMKD 294
++ L +WV L L +VD +L+ + KD
Sbjct: 243 DDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKD 275
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 138/273 (50%), Gaps = 27/273 (9%)
Query: 23 LLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF 82
L+P ++R +D++ AT F+ L+G G FG VYKG+L DG VA+K + +
Sbjct: 21 LVPFESYR-VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGI 79
Query: 83 RSFDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTL--- 139
F++E E L H +L+ + C + L+ + M NG+L+ LY + L T+
Sbjct: 80 EEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD--LPTMSMS 137
Query: 140 --ERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGE 197
+RL I I L YLH + I+H D+K NILLDEN V +++DFGISK + +
Sbjct: 138 WEQRLEICIGAARGLHYLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD 193
Query: 198 DSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ + T+GY+ P ++ +G ++ K DVYSFGV+L E +
Sbjct: 194 QTHLXXVVKGTLGYIDP-------------EYFIKGRLTEKSDVYSFGVVLFEVLCARSA 240
Query: 258 TDEMFTGE-ISLKNWVNESLPHA-LTDVVDANL 288
+ E ++L W ES + L +VD NL
Sbjct: 241 IVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL 273
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 137/273 (50%), Gaps = 27/273 (9%)
Query: 23 LLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF 82
L+P ++R +D++ AT F+ L+G G FG VYKG+L DG VA+K + +
Sbjct: 21 LVPFESYR-VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGI 79
Query: 83 RSFDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTL--- 139
F++E E L H +L+ + C + L+ + M NG+L+ LY + L T+
Sbjct: 80 EEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD--LPTMSMS 137
Query: 140 --ERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGE 197
+RL I I L YLH + I+H D+K NILLDEN V +++DFGISK +
Sbjct: 138 WEQRLEICIGAARGLHYLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELG 193
Query: 198 DSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ + T+GY+ P ++ +G ++ K DVYSFGV+L E +
Sbjct: 194 QTHLXXVVKGTLGYIDP-------------EYFIKGRLTEKSDVYSFGVVLFEVLCARSA 240
Query: 258 TDEMFTGE-ISLKNWVNESLPHA-LTDVVDANL 288
+ E ++L W ES + L +VD NL
Sbjct: 241 IVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL 273
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 118/246 (47%), Gaps = 43/246 (17%)
Query: 33 SYLDIQRATEGFNE------CNLLGTGSFGIVYKGILSDGNNVAIKVFKL------QLGR 80
S+ +++ T F+E N +G G FG+VYKG + NN + V KL
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV---NNTTVAVKKLAAMVDITTEE 72
Query: 81 AFRSFDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLE 140
+ FD E +V+ H NL+++ S+ D LV MPNGSL + L LD
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC----LDGTP 128
Query: 141 RLNIMIDVWLA------LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLG 194
L+ + +A + +LH H +H D+K +NILLDE A++SDFG+++
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 195 DGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTG 254
+V + + T YMAP + L+ G I+ K D+YSFGV+L+E TG
Sbjct: 185 KFAQTVMXSRIVGTTAYMAP-----EALR---------GEITPKSDIYSFGVVLLEIITG 230
Query: 255 KKPTDE 260
DE
Sbjct: 231 LPAVDE 236
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 117/246 (47%), Gaps = 43/246 (17%)
Query: 33 SYLDIQRATEGFNE------CNLLGTGSFGIVYKGILSDGNNVAIKVFKL------QLGR 80
S+ +++ T F+E N +G G FG+VYKG + NN + V KL
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV---NNTTVAVKKLAAMVDITTEE 72
Query: 81 AFRSFDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLE 140
+ FD E +V+ H NL+++ S+ D LV MPNGSL + L LD
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC----LDGTP 128
Query: 141 RLNIMIDVWLA------LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLG 194
L+ + +A + +LH H +H D+K +NILLDE A++SDFG+++
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 195 DGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTG 254
+V + T YMAP + L+ G I+ K D+YSFGV+L+E TG
Sbjct: 185 KFAQTVMXXRIVGTTAYMAP-----EALR---------GEITPKSDIYSFGVVLLEIITG 230
Query: 255 KKPTDE 260
DE
Sbjct: 231 LPAVDE 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 116/246 (47%), Gaps = 43/246 (17%)
Query: 33 SYLDIQRATEGFNE------CNLLGTGSFGIVYKGILSDGNNVAIKVFKL------QLGR 80
S+ +++ T F+E N +G G FG+VYKG + NN + V KL
Sbjct: 10 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV---NNTTVAVKKLAAMVDITTEE 66
Query: 81 AFRSFDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLE 140
+ FD E +V+ H NL+++ S+ D LV MPNGSL + L LD
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC----LDGTP 122
Query: 141 RLNIMIDVWLA------LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLG 194
L+ + +A + +LH H +H D+K +NILLDE A++SDFG+++
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 195 DGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTG 254
V + T YMAP + L+ G I+ K D+YSFGV+L+E TG
Sbjct: 179 KFAQXVMXXRIVGTTAYMAP-----EALR---------GEITPKSDIYSFGVVLLEIITG 224
Query: 255 KKPTDE 260
DE
Sbjct: 225 LPAVDE 230
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 134/287 (46%), Gaps = 50/287 (17%)
Query: 50 LGTGSFGIVYKG-ILSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHHRNLL 101
+G G FG+V+KG ++ D + VAIK L ++ F+ F E ++ N++H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
K++ NP +V+E +P G L + L + + +L +M+D+ L +EY+ + +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN--QN 142
Query: 162 APIVHCDLKPSNILL---DEN--MVARVSDFGISK--------LLGDGEDSVTQTMTMAT 208
PIVH DL+ NI L DEN + A+V+DFG+S+ LLG+ Q M T
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGN-----FQWMAPET 197
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISL 268
IG E + K D YSF ++L TG+ P DE G+I
Sbjct: 198 IG-------------------AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
Query: 269 KNWV-NESLPHALTDVVDANLRVSMKDVAAKLKKIRVKFLYDVAATS 314
N + E L + + LR ++ + K R F Y V S
Sbjct: 239 INMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 110/242 (45%), Gaps = 35/242 (14%)
Query: 33 SYLDIQRATEGFNE------CNLLGTGSFGIVYKGILSDGNNVAIKVFKL------QLGR 80
S+ +++ T F+E N G G FG+VYKG + NN + V KL
Sbjct: 7 SFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV---NNTTVAVKKLAAMVDITTEE 63
Query: 81 AFRSFDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYF--LDT 138
+ FD E +V H NL+++ S+ D LV PNGSL + L + L
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 139 LERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGED 198
R I + +LH H +H D+K +NILLDE A++SDFG+++
Sbjct: 124 HXRCKIAQGAANGINFLHENHH----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 199 SVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPT 258
V + + T Y AP + L+ G I+ K D+YSFGV+L+E TG
Sbjct: 180 XVXXSRIVGTTAYXAP-----EALR---------GEITPKSDIYSFGVVLLEIITGLPAV 225
Query: 259 DE 260
DE
Sbjct: 226 DE 227
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 133/287 (46%), Gaps = 50/287 (17%)
Query: 50 LGTGSFGIVYKG-ILSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHHRNLL 101
+G G FG+V+KG ++ D + VAIK L ++ F+ F E ++ N++H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
K++ NP +V+E +P G L + L + + +L +M+D+ L +EY+ + +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN--QN 142
Query: 162 APIVHCDLKPSNILL---DEN--MVARVSDFG--------ISKLLGDGEDSVTQTMTMAT 208
PIVH DL+ NI L DEN + A+V+DFG +S LLG+ Q M T
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGN-----FQWMAPET 197
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISL 268
IG E + K D YSF ++L TG+ P DE G+I
Sbjct: 198 IG-------------------AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
Query: 269 KNWV-NESLPHALTDVVDANLRVSMKDVAAKLKKIRVKFLYDVAATS 314
N + E L + + LR ++ + K R F Y V S
Sbjct: 239 INMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 50/287 (17%)
Query: 50 LGTGSFGIVYKG-ILSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHHRNLL 101
+G G FG+V+KG ++ D + VAIK L ++ F+ F E ++ N++H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
K++ NP +V+E +P G L + L + + +L +M+D+ L +EY+ + +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN--QN 142
Query: 162 APIVHCDLKPSNILL---DEN--MVARVSDFGISK--------LLGDGEDSVTQTMTMAT 208
PIVH DL+ NI L DEN + A+V+DF +S+ LLG+ Q M T
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGN-----FQWMAPET 197
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISL 268
IG E + K D YSF ++L TG+ P DE G+I
Sbjct: 198 IG-------------------AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
Query: 269 KNWV-NESLPHALTDVVDANLRVSMKDVAAKLKKIRVKFLYDVAATS 314
N + E L + + LR ++ + K R F Y V S
Sbjct: 239 INMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 115/238 (48%), Gaps = 22/238 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG+G FG+V G +VA+K+ K + + F E + + + H L+K + CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
+V E + NG L N+L SH L+ + L + DV + +L S +H DL
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL----ESHQFIHRDL 130
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+D ++ +VSDFG+++ + D + V+ T + + AP ++F K
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAP--EVFHYFK------ 181
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISLKNWVNESL--PHALTDVV 284
S+K DV++FG+L+ E F+ GK P D E+ LK L PH +D +
Sbjct: 182 -----YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTI 234
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 20/219 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LGTG FG+V G +VAIK+ K + + F E +V+ N+ H L++++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
++ E M NG L N+L + T + L + DV A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHRDL 146
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+++ V +VSDFG+S+ + D E++ +++G PV P
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEET-------SSVGSKFPVR-----WSPPEVLM 194
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
S+ S+K D+++FGVL+ E ++ GK P + E +
Sbjct: 195 YSK--FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 20/219 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LGTG FG+V G +VAIK+ K + + F E +V+ N+ H L++++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
++ E M NG L N+L + T + L + DV A+EYL S +H DL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL----ESKQFLHRDL 126
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+++ V +VSDFG+S+ + D E + +++G PV P
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDEYT-------SSVGSKFPVR-----WSPPEVLM 174
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
S+ S+K D+++FGVL+ E ++ GK P + E +
Sbjct: 175 YSK--FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 211
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 20/219 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LGTG FG+V G +VAIK+ K + + F E +V+ N+ H L++++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
++ E M NG L N+L + T + L + DV A+EYL S +H DL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL----ESKQFLHRDL 130
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+++ V +VSDFG+S+ + D E + +++G PV P
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLDDEYT-------SSVGSKFPVR-----WSPPEVLM 178
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
S+ S+K D+++FGVL+ E ++ GK P + E +
Sbjct: 179 YSK--FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 215
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 20/219 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LGTG FG+V G +VAIK+ K + + F E +V+ N+ H L++++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
++ E M NG L N+L + T + L + DV A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL----ESKQFLHRDL 131
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+++ V +VSDFG+S+ + D E + +++G PV P
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYT-------SSVGSKFPVR-----WSPPEVLM 179
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
S+ S+K D+++FGVL+ E ++ GK P + E +
Sbjct: 180 YSK--FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 20/219 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LGTG FG+V G +VAIK+ K + + F E +V+ N+ H L++++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
++ E M NG L N+L + T + L + DV A+EYL S +H DL
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHRDL 137
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+++ V +VSDFG+S+ + D E + +++G PV P
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVLDDEYT-------SSVGSKFPVR-----WSPPEVLM 185
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
S+ S+K D+++FGVL+ E ++ GK P + E +
Sbjct: 186 YSK--FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 222
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 20/219 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LGTG FG+V G +VAIK+ K + + F E +V+ N+ H L++++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
++ E M NG L N+L + T + L + DV A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHRDL 146
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+++ V +VSDFG+S+ + D E + +++G PV P
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEYT-------SSVGSKFPVR-----WSPPEVLM 194
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
S+ S+K D+++FGVL+ E ++ GK P + E +
Sbjct: 195 YSK--FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
+G+G FG+V+ G + + VAIK + + + F E EV+ + H L++++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
LV E M +G L ++L + L + +DV + YL A ++H DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ASVIHRDL 129
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+ EN V +VSDFG+++ + D + + T T + + +P ++F +
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASP--EVFSFSR------ 180
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
S+K DV+SFGVL+ E F+ GK P + E+
Sbjct: 181 -----YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 213
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 22/221 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFR--SFDSECEVLRNVHHRNLLKIFSSC 107
+G GSFG V++ G++VA+K+ Q A R F E +++ + H N++ +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYF--LDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
+ P ++V E + GSL L+ LD RL++ DV + YLH+ + PIV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN--RNPPIV 161
Query: 166 HCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPK 225
H DLK N+L+D+ +V DFG+S+L + T +MAP ++L+ +
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAP-----EVLRDE 214
Query: 226 NAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI 266
+ + K DVYSFGV+L E T ++P + ++
Sbjct: 215 PS--------NEKSDVYSFGVILWELATLQQPWGNLNPAQV 247
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LGTG FG+V G +VAIK+ K + + F E +V+ N+ H L++++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
++ E M NG L N+L + T + L + DV A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL----ESKQFLHRDL 131
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+++ V +VSDFG+S+ + D E + ++ G PV P
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSR-------GSKFPVR-----WSPPEVLM 179
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
S+ S+K D+++FGVL+ E ++ GK P + E +
Sbjct: 180 YSK--FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 216
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
+G+G FG+V+ G + + VAIK + + + F E EV+ + H L++++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
LV E M +G L ++L + L + +DV + YL A ++H DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 132
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+ EN V +VSDFG+++ + D + + T T + + +P ++F +
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASP--EVFSFSR------ 183
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
S+K DV+SFGVL+ E F+ GK P + E+
Sbjct: 184 -----YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 216
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
+G+G FG+V+ G + + VAIK + + + F E EV+ + H L++++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
LV E M +G L ++L + L + +DV + YL A ++H DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 129
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+ EN V +VSDFG+++ + D + + T T + + +P ++F +
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASP--EVFSFSR------ 180
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
S+K DV+SFGVL+ E F+ GK P + E+
Sbjct: 181 -----YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 213
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
+G+G FG+V+ G + + VAIK + + + F E EV+ + H L++++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
LV E M +G L ++L + L + +DV + YL A ++H DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 127
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+ EN V +VSDFG+++ + D + + T T + + +P ++F +
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASP--EVFSFSR------ 178
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
S+K DV+SFGVL+ E F+ GK P + E+
Sbjct: 179 -----YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 211
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
+G+G FG+V+ G + + VAIK + + + F E EV+ + H L++++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
LV E M +G L ++L + L + +DV + YL A ++H DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 130
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+ EN V +VSDFG+++ + D + + T T + + +P ++F +
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASP--EVFSFSR------ 181
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
S+K DV+SFGVL+ E F+ GK P + E+
Sbjct: 182 -----YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 214
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 20/218 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
+G+G FG+V+ G + + VAIK K + + F E EV+ + H L++++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
LV E M +G L ++L + L + +DV + YL A ++H DL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDL 149
Query: 170 KPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKF 229
N L+ EN V +VSDFG+++ + D + + T T + + +P ++F +
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASP--EVFSFSR------ 200
Query: 230 GSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
S+K DV+SFGVL+ E F+ GK P + E+
Sbjct: 201 -----YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 233
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 38/299 (12%)
Query: 23 LLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNV----AIKVFKLQ 77
L P T + L I + TE +LG+G+FG VYKGI + +G V AIK+
Sbjct: 20 LTPSGTAPNQAQLRILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET 78
Query: 78 LG-RAFRSFDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFL 136
G +A F E ++ ++ H +L+++ C +P + LV +LMP+G L +++ H +
Sbjct: 79 TGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNI 137
Query: 137 DTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG 196
+ LN + + + YL +VH DL N+L+ +++DFG+++LL
Sbjct: 138 GSQLLLNWCVQIAKGMMYLEERR----LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 193
Query: 197 EDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GK 255
E I +MA + KF + + DV+S+GV + E T G
Sbjct: 194 EKEYNADGGKMPIKWMALECIHY-------RKF------THQSDVWSYGVTIWELMTFGG 240
Query: 256 KPTDEMFTGEISLKNWVNESLPHA---LTDV---------VDANLRVSMKDVAAKLKKI 302
KP D + T EI E LP DV +DA+ R K++AA+ ++
Sbjct: 241 KPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 299
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 22/221 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFR--SFDSECEVLRNVHHRNLLKIFSSC 107
+G GSFG V++ G++VA+K+ Q A R F E +++ + H N++ +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYF--LDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
+ P ++V E + GSL L+ LD RL++ DV + YLH+ + PIV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN--RNPPIV 161
Query: 166 HCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPK 225
H +LK N+L+D+ +V DFG+S+L ++ T +MAP ++L+ +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAP-----EVLRDE 214
Query: 226 NAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI 266
+ + K DVYSFGV+L E T ++P + ++
Sbjct: 215 PS--------NEKSDVYSFGVILWELATLQQPWGNLNPAQV 247
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V+E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALY--------- 189
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 190 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 129
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALY--------- 179
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 180 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 214
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V+E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 189
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 190 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 189
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 190 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 35/294 (11%)
Query: 9 VLRKRSAK-------IIAPIDLLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKG 61
++RKR+ + ++ P L P + L I + TE F + +LG+G+FG VYKG
Sbjct: 12 IVRKRTLRRLLQERELVEP--LTPSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKG 68
Query: 62 I-LSDGNNVAIKVFKLQL-----GRAFRSFDSECEVLRNVHHRNLLKIFSSCSNPDFKAL 115
+ + +G V I V ++L +A + E V+ +V + ++ ++ C + L
Sbjct: 69 LWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-L 127
Query: 116 VLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNIL 175
+ +LMP G L +++ H + + LN + + + YL +VH DL N+L
Sbjct: 128 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR----LVHRDLAARNVL 183
Query: 176 LDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGII 235
+ +++DFG++KLLG E I +MA S L I
Sbjct: 184 VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY------------- 230
Query: 236 SAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISLKNWVNESLPHALTDVVDANL 288
+ + DV+S+GV + E T G KP D + EIS E LP +D +
Sbjct: 231 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 284
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 38/289 (13%)
Query: 33 SYLDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNV----AIKVFKLQLG-RAFRSFD 86
+ L I + TE +LG+G+FG VYKGI + +G V AIK+ G +A F
Sbjct: 7 AQLRILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFM 65
Query: 87 SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMI 146
E ++ ++ H +L+++ C +P + LV +LMP+G L +++ H + + LN +
Sbjct: 66 DEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCV 124
Query: 147 DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM 206
+ + YL +VH DL N+L+ +++DFG+++LL E
Sbjct: 125 QIAKGMMYLEERR----LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGK 180
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGE 265
I +MA + KF + + DV+S+GV + E T G KP D + T E
Sbjct: 181 MPIKWMALECIHY-------RKF------THQSDVWSYGVTIWELMTFGGKPYDGIPTRE 227
Query: 266 ISLKNWVNESLPHA---LTDV---------VDANLRVSMKDVAAKLKKI 302
I E LP DV +DA+ R K++AA+ ++
Sbjct: 228 IPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 276
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 110 PDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 132
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 182
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 183 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 217
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 24/217 (11%)
Query: 48 NLLGTGSFGIVYKGIL--SDGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLK 102
++G+G G V G L +V + + L+ G R R F SE ++ H N+++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ + +V E M NGSL+ +L +H+ ++ + ++ V + YL S
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL----SDL 170
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMAPVSQLFDI 221
VH DL N+L+D N+V +VSDFG+S++L D D+ T T I + AP + F
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
S+ DV+SFGV++ E G++P
Sbjct: 231 F-------------SSASDVWSFGVVMWEVLAYGERP 254
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 24/217 (11%)
Query: 48 NLLGTGSFGIVYKGIL--SDGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLK 102
++G+G G V G L +V + + L+ G R R F SE ++ H N+++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ + +V E M NGSL+ +L +H+ ++ + ++ V + YL S
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL----SDL 170
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMAPVSQLFDI 221
VH DL N+L+D N+V +VSDFG+S++L D D+ T T I + AP + F
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
S+ DV+SFGV++ E G++P
Sbjct: 231 F-------------SSASDVWSFGVVMWEVLAYGERP 254
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 74 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 128
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 178
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 179 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 85 EPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 189
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 190 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 19/210 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKL--QLGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ K+ F++F +E VLR H N+L +F
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGY 100
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
D A+V + SL L+ + ++I ++YLH + I+H
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH----AKNIIHR 156
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
D+K +NI L E + ++ DFG++ + S ++ +MAP ++++ ++
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP-----EVIRMQD- 210
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S + DVYS+G++L E TG+ P
Sbjct: 211 ----NNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 130
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 180
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 181 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 136
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 192
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 193 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 244 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 189
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 190 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 133
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 189
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 190 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 131
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 187
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 188 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 238
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 239 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 288
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 151
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 207
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 208 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 258
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 259 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 132
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 188
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 189 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 239
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 240 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 289
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 133
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 189
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 190 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 151
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 207
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 208 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 258
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 259 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL +L H +D ++ L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 136
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 192
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 193 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 244 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 140
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 196
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 197 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 247
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 248 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 297
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 138
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 194
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 195 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 245
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 246 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 295
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 137
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 193
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 194 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 244
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 245 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 294
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 110 PDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 305
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 355
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 356 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 110 PDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 305
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 355
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 356 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 164
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 220
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 221 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 272 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 139
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 195
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 196 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 246
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 247 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 296
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L +H +D ++ L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL----GTK 136
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL---- 192
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 193 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 244 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 334 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 388
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 438
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 439 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 473
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN----YVHRD 136
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 186
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 187 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 221
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V+E M G L ++L +L + +++ + + Y+ + VH D
Sbjct: 85 EPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 189
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 190 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN----YVHRD 136
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP-IKWTAPEAALY--------- 186
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 187 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 10 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+++LMP G L +++ H + + LN + +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 128 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 184 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 231 SILEKGERLPQPPICTID 248
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-NMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 252 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 306
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+ +L+ D E + Q I + AP + L+
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 356
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 357 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 391
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 10 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+++LMP G L +++ H + + LN + +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 128 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 184 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
Query: 268 LKNWVNESLPHALTDVVDANL 288
E LP +D +
Sbjct: 231 SILEKGERLPQPPICTIDVYM 251
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+++LMP G L +++ H + + LN + +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 131 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 186
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 187 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 234 SILEKGERLPQPPICTID 251
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+++LMP G L +++ H + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 130 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 186 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
Query: 268 LKNWVNESLPHALTDVVDANL 288
E LP +D +
Sbjct: 233 SILEKGERLPQPPICTIDVYM 253
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+++LMP G L +++ H + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 129 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 185 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Query: 268 LKNWVNESLPHALTDVVDANL 288
E LP +D +
Sbjct: 232 SILEKGERLPQPPICTIDVYM 252
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+++LMP G L +++ H + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 127 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 183 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Query: 268 LKNWVNESLPHALTDVVDANL 288
E LP +D +
Sbjct: 230 SILEKGERLPQPPICTIDVYM 250
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 251 EPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 305
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 355
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 356 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L +L + +++ + + Y+ + VH D
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 189
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 190 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 26/261 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 127 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 183 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Query: 268 LKNWVNESLPHALTDVVDANL 288
E LP +D +
Sbjct: 230 SILEKGERLPQPPICTIDVYM 250
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + +F E +V++ + H L+++++ S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 110 PDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M G L ++L +L + +++ + + Y+ + VH D
Sbjct: 85 EPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRD 139
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ EN+V +V+DFG+++L+ D E + Q I + AP + L+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALY--------- 189
Query: 229 FGSEGIISAKCDVYSFGVLLME-TFTGKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 190 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 134 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 190 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 237 SILEKGERLPQPPICTID 254
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 126/280 (45%), Gaps = 44/280 (15%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGN-NVAIKVFKL---QLGRAFRSFDSECEVLRNVHH 97
E + + LG G VY + N VAIK + + + F+ E + H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYF-LDTLERLNIMIDVWLALEYLH 156
+N++ + D LV+E + +L ++ SH +DT I L+ +
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQI-----LDGIK 125
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT-MTMATIGYMAPV 215
H H IVH D+KP NIL+D N ++ DFGI+K L E S+TQT + T+ Y +
Sbjct: 126 HAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLTQTNHVLGTVQYFS-- 180
Query: 216 SQLFDILKPKNAKFGSEGIISAKC-DVYSFGVLLMETFTGKKPTDEMFTGEISLK---NW 271
P+ AK G + +C D+YS G++L E G+ P F GE ++
Sbjct: 181 --------PEQAK----GEATDECTDIYSIGIVLYEMLVGEPP----FNGETAVSIAIKH 224
Query: 272 VNESLPHALTDV--------VDANLRVSMKDVAAKLKKIR 303
+ +S+P+ TDV + LR + KD A + K I+
Sbjct: 225 IQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQ 264
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 133
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H DL NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL---- 189
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 190 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 26/261 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 129 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 185 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Query: 268 LKNWVNESLPHALTDVVDANL 288
E LP +D +
Sbjct: 232 SILEKGERLPQPPICTIDVYM 252
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 50 LGTGSFGIVYKGIL-SDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLLKIFSSC 107
+G G+FG V+ G L +D VA+K + L ++ F E +L+ H N++++ C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
+ +V+EL+ G +L + L L ++ D +EYL S +H
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL----ESKCCIHR 237
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ E V ++SDFG+S+ DG + + + + + AP + +
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNY-------- 289
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
G S++ DV+SFG+LL ETF+ G P
Sbjct: 290 -----GRYSSESDVWSFGILLWETFSLGASP 315
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 127 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 183 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 230 SILEKGERLPQPPICTID 247
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 26/261 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 19 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 77
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 136
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 137 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 193 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 239
Query: 268 LKNWVNESLPHALTDVVDANL 288
E LP +D +
Sbjct: 240 SILEKGERLPQPPICTIDVYM 260
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 130 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 186 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 233 SILEKGERLPQPPICTID 250
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 26/261 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+++LMP G L +++ H + + LN + +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG +KLLG E
Sbjct: 131 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 187 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
Query: 268 LKNWVNESLPHALTDVVDANL 288
E LP +D +
Sbjct: 234 SILEKGERLPQPPICTIDVYM 254
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 127 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 183 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 230 SILEKGERLPQPPICTID 247
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 26/261 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 130 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 186 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
Query: 268 LKNWVNESLPHALTDVVDANL 288
E LP +D +
Sbjct: 233 SILEKGERLPQPPICTIDVYM 253
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 26/261 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 3 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 120
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 121 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 177 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 223
Query: 268 LKNWVNESLPHALTDVVDANL 288
E LP +D +
Sbjct: 224 SILEKGERLPQPPICTIDVYM 244
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 130 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 186 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 233 SILEKGERLPQPPICTID 250
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+++LMP G L +++ H + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG +KLLG E
Sbjct: 129 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 185 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 232 SILEKGERLPQPPICTID 249
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 15 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 73
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 74 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 132
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 133 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 189 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 235
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 236 SILEKGERLPQPPICTID 253
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 26/261 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 6 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 64
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 65 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 123
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 124 AEGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 180 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 226
Query: 268 LKNWVNESLPHALTDVVDANL 288
E LP +D +
Sbjct: 227 SILEKGERLPQPPICTIDVYM 247
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 34 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 92
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 93 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 151
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 152 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 208 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 254
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 255 SILEKGERLPQPPICTID 272
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+++LMP G L +++ H + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG +KLLG E
Sbjct: 129 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 185 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 232 SILEKGERLPQPPICTID 249
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 25/227 (11%)
Query: 48 NLLGTGSFGIVYKGIL--SDGNN---VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLL 101
++G G FG VYKG+L S G VAIK K R F E ++ H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
++ S ++ E M NG+L+ +L + L+ + ++ + ++YL ++
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL----AN 165
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFD 220
VH DL NIL++ N+V +VSDFG+S++L D E + T + I + AP + +
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY- 224
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+SFG+++ E T G++P E+ E+
Sbjct: 225 ------RKF------TSASDVWSFGIVMWEVMTYGERPYWELSNHEV 259
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ + + ++F +E VLR H N+L
Sbjct: 18 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW----LALEYLHHGHSSAP 163
+ P A+V + SL Y H + ++T + +ID+ ++YLH +
Sbjct: 76 TKPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKS 126
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
I+H DLK +NI L E++ ++ DFG++ + S +I +MAP ++++
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-----EVIR 181
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++ + S + DVY+FG++L E TG+ P
Sbjct: 182 MQD-----KNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 50 LGTGSFGIVYKGIL-SDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLLKIFSSC 107
+G G+FG V+ G L +D VA+K + L ++ F E +L+ H N++++ C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
+ +V+EL+ G +L + L L ++ D +EYL S +H
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL----ESKCCIHR 237
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ E V ++SDFG+S+ DG + + + + + AP + +
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNY-------- 289
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
G S++ DV+SFG+LL ETF+ G P
Sbjct: 290 -----GRYSSESDVWSFGILLWETFSLGASP 315
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F+ E E+L+++ H N++K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 105 SSCSNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
C + + L++E +P GSL ++L H +D ++ L + +EYL +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL----GTK 134
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
+H +L NIL++ ++ DFG++K+L D E + + I + AP S
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL---- 190
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDEMF-------TGEIS--- 267
+E S DV+SFGV+L E FT K P E G++
Sbjct: 191 ---------TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 241
Query: 268 ----LKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKIR 303
LKN P D + + N R S +D+A ++ +IR
Sbjct: 242 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 291
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ + + ++F +E VLR H N+L
Sbjct: 16 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW----LALEYLHHGHSSAP 163
+ P A+V + SL Y H + ++T + +ID+ ++YLH +
Sbjct: 74 TKPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKS 124
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
I+H DLK +NI L E++ ++ DFG++ + S +I +MAP ++++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-----EVIR 179
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++ + S + DVY+FG++L E TG+ P
Sbjct: 180 MQD-----KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ + + ++F +E VLR H N+L
Sbjct: 21 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW----LALEYLHHGHSSAP 163
+ P A+V + SL Y H + ++T + +ID+ ++YLH +
Sbjct: 79 TKPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKS 129
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
I+H DLK +NI L E++ ++ DFG++ + S +I +MAP ++++
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-----EVIR 184
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++ + S + DVY+FG++L E TG+ P
Sbjct: 185 MQD-----KNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ + + ++F +E VLR H N+L
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW----LALEYLHHGHSSAP 163
+ P A+V + SL Y H + ++T + +ID+ ++YLH +
Sbjct: 102 TKPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKS 152
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
I+H DLK +NI L E++ ++ DFG++ + S +I +MAP ++++
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-----EVIR 207
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++ + S + DVY+FG++L E TG+ P
Sbjct: 208 MQD-----KNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ + + ++F +E VLR H N+L
Sbjct: 21 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW----LALEYLHHGHSSAP 163
+ P A+V + SL Y H + ++T + +ID+ ++YLH +
Sbjct: 79 TKPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKS 129
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
I+H DLK +NI L E++ ++ DFG++ + S +I +MAP ++++
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-----EVIR 184
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++ + S + DVY+FG++L E TG+ P
Sbjct: 185 MQD-----KNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 42/239 (17%)
Query: 50 LGTGSFGIVYKGILSDGNN---------VAIKVFKLQLGRAFRSFDSECEVLRNVHHRNL 100
LG G+FG V+ L++ N VA+K K A + F E E+L N+ H ++
Sbjct: 21 LGEGAFGKVF---LAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHN------------YFLDTLERLNIMIDV 148
+K + C D +V E M +G L +L +H L + L+I +
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +S VH DL N L+ EN++ ++ DFG+S+ + + TM
Sbjct: 138 AAGMVYL----ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
I +M P S ++ KF +E DV+S GV+L E FT GK+P ++ E+
Sbjct: 194 IRWMPPESIMY-------RKFTTES------DVWSLGVVLWEIFTYGKQPWYQLSNNEV 239
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ + + ++F +E VLR H N+L
Sbjct: 43 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW----LALEYLHHGHSSAP 163
+ P A+V + SL Y H + ++T + +ID+ ++YLH +
Sbjct: 101 TKPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKS 151
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
I+H DLK +NI L E++ ++ DFG++ + S +I +MAP ++++
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-----EVIR 206
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++ + S + DVY+FG++L E TG+ P
Sbjct: 207 MQD-----KNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ + + ++F +E VLR H N+L
Sbjct: 20 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
+ P A+V + SL + L++ + + ++I ++YLH + I+H
Sbjct: 78 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHR 132
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DLK +NI L E+ ++ DFG++ + S +I +MAP ++++ +++
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-----EVIRMQDS 187
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S + DVY+FG++L E TG+ P
Sbjct: 188 N-----PYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 118/258 (45%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +L +G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 16 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+++LMP G L +++ H + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 134 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 190 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 237 SILEKGERLPQPPICTID 254
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG +KLLG E
Sbjct: 134 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 190 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 237 SILEKGERLPQPPICTID 254
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+LG G++GIVY G LS+ +AIK + R + E + +++ H+N+++ S
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 108 SNPDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWL-ALEYLHHGHSSAPIV 165
S F + +E +P GSL L S D + + L L+YLH IV
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ----IV 144
Query: 166 HCDLKPSNILLDE-NMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKP 224
H D+K N+L++ + V ++SDFG SK L G + T+T T T+ YMAP ++ D
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFT-GTLQYMAP--EIIDK--- 197
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEM 261
G G A D++S G ++E TGK P E+
Sbjct: 198 -----GPRGYGKA-ADIWSLGCTIIEMATGKPPFYEL 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG +KLLG E
Sbjct: 129 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 185 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 232 SILEKGERLPQPPICTID 249
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ + + ++F +E VLR H N+L
Sbjct: 16 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW----LALEYLHHGHSSAP 163
+ P A+V + SL Y H + ++T + +ID+ ++YLH +
Sbjct: 74 TAPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKS 124
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
I+H DLK +NI L E++ ++ DFG++ + S +I +MAP ++++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-----EVIR 179
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++ + S + DVY+FG++L E TG+ P
Sbjct: 180 MQD-----KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 118/261 (45%), Gaps = 26/261 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +LG+G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG +KLLG E
Sbjct: 127 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 183 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Query: 268 LKNWVNESLPHALTDVVDANL 288
E LP +D +
Sbjct: 230 SILEKGERLPQPPICTIDVYM 250
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 111/242 (45%), Gaps = 45/242 (18%)
Query: 50 LGTGSFGIVYKGILSDGNN---------VAIKVFKLQLGRAFRSFDSECEVLRNVHHRNL 100
LG G+FG V+ L++ N VA+K K A + F E E+L N+ H ++
Sbjct: 23 LGEGAFGKVF---LAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHN----YFLDTLER-----------LNIM 145
+K + C + D +V E M +G L +L +H +D R L+I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ + YL +S VH DL N L+ N++ ++ DFG+S+ + + T
Sbjct: 140 SQIASGMVYL----ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTG 264
M I +M P S ++ KF +E DV+SFGV+L E FT GK+P ++
Sbjct: 196 MLPIRWMPPESIMY-------RKFTTES------DVWSFGVILWEIFTYGKQPWFQLSNT 242
Query: 265 EI 266
E+
Sbjct: 243 EV 244
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 21/217 (9%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+LG G++GIVY G LS+ +AIK + R + E + +++ H+N+++ S
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 108 SNPDFKALVLELMPNGSLENWLYSH-NYFLDTLERLNIMIDVWL-ALEYLHHGHSSAPIV 165
S F + +E +P GSL L S D + + L L+YLH IV
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ----IV 130
Query: 166 HCDLKPSNILLDE-NMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKP 224
H D+K N+L++ + V ++SDFG SK L G + T+T T T+ YMAP +I+
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFT-GTLQYMAP-----EIIDK 183
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEM 261
+G D++S G ++E TGK P E+
Sbjct: 184 GPRGYGK------AADIWSLGCTIIEMATGKPPFYEL 214
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ + + ++F +E VLR H N+L
Sbjct: 16 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW----LALEYLHHGHSSAP 163
+ P A+V + SL Y H + ++T + +ID+ ++YLH +
Sbjct: 74 TKPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKS 124
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
I+H DLK +NI L E++ ++ DFG++ S +I +MAP ++++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP-----EVIR 179
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++ + S + DVY+FG++L E TG+ P
Sbjct: 180 MQD-----KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ + + ++F +E VLR H N+L
Sbjct: 36 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW----LALEYLHHGHSSAP 163
+ P A+V + SL Y H + ++T + +ID+ ++YLH +
Sbjct: 94 TKPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKS 144
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
I+H DLK +NI L E++ ++ DFG++ S +I +MAP ++++
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP-----EVIR 199
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++ + S + DVY+FG++L E TG+ P
Sbjct: 200 MQD-----KNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ + + ++F +E VLR H N+L
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW----LALEYLHHGHSSAP 163
+ P A+V + SL Y H + ++T + +ID+ ++YLH +
Sbjct: 102 TKPQL-AIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLH----AKS 152
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
I+H DLK +NI L E++ ++ DFG++ S +I +MAP ++++
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP-----EVIR 207
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++ + S + DVY+FG++L E TG+ P
Sbjct: 208 MQD-----KNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 48 NLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
++G G+FG+V K +VAIK + + R ++F E L V+H N++K++ +C
Sbjct: 15 EVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNY--FLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
NP LV+E GSL N L+ + ++ + + YLH A ++
Sbjct: 72 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LI 128
Query: 166 HCDLKPSNILL-DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKP 224
H DLKP N+LL V ++ DFG + + T + +MAP ++F+
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAP--EVFE---- 177
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEM 261
GS S KCDV+S+G++L E T +KP DE+
Sbjct: 178 -----GSN--YSEKCDVFSWGIILWEVITRRKPFDEI 207
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +L +G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 16 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 134 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 190 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 237 SILEKGERLPQPPICTID 254
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 27/217 (12%)
Query: 48 NLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
++G G+FG+V K +VAIK + + R ++F E L V+H N++K++ +C
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNY--FLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
NP LV+E GSL N L+ + ++ + + YLH A ++
Sbjct: 71 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LI 127
Query: 166 HCDLKPSNILL-DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKP 224
H DLKP N+LL V ++ DFG + + T + +MAP ++F+
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAP--EVFE---- 176
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEM 261
GS S KCDV+S+G++L E T +KP DE+
Sbjct: 177 -----GSN--YSEKCDVFSWGIILWEVITRRKPFDEI 206
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 26/261 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-----GRAFRSFDSE 88
L I + TE F + +L +G+FG VYKG+ + +G V I V +L +A + E
Sbjct: 9 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ +V + ++ ++ C + L+ +LMP G L +++ H + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG++KLLG E
Sbjct: 127 AKGMNYLEDRR----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA S L I + + DV+S+GV + E T G KP D + EIS
Sbjct: 183 IKWMALESILHRIY-------------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
Query: 268 LKNWVNESLPHALTDVVDANL 288
E LP +D +
Sbjct: 230 SILEKGERLPQPPICTIDVYM 250
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 19/210 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ + + ++F +E VLR H N+L
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
+ P A+V + SL + L++ + + ++I ++YLH + I+H
Sbjct: 90 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHR 144
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DLK +NI L E+ ++ DFG++ S +I +MAP ++++ +++
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP-----EVIRMQDS 199
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S + DVY+FG++L E TG+ P
Sbjct: 200 N-----PYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 19/210 (9%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
+G+GSFG VYKG +VA+K+ + + ++F +E VLR H N+L
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
+ P A+V + SL + L++ + + ++I ++YLH + I+H
Sbjct: 90 TAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH----AKSIIHR 144
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DLK +NI L E+ ++ DFG++ S +I +MAP ++++ +++
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP-----EVIRMQDS 199
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S + DVY+FG++L E TG+ P
Sbjct: 200 N-----PYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 41/266 (15%)
Query: 48 NLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFD------SECEVLRNVHHRNL 100
+ LG G+FG V G G+ VA+K+ Q RS D E + L+ H ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
+K++ S P +V+E + G L +++ H ++ +E + + A++Y H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCH---- 128
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFD 220
+VH DLKP N+LLD +M A+++DFG+S ++ DGE T + + Y AP
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT---SCGSPNYAAP------ 179
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE---------MFTGEISLKNW 271
+ D++S GV+L G P D+ + G + +
Sbjct: 180 ------EVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY 233
Query: 272 VNESLPHALTDV--VDANLRVSMKDV 295
+N S+ L + VD R ++KD+
Sbjct: 234 LNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 127/276 (46%), Gaps = 44/276 (15%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS-CS 108
+G G FG V G GN VA+K K ++F +E V+ + H NL+++
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFL---DTLERLNIMIDVWLALEYLHHGHSSAPIV 165
+V E M GSL ++L S + D L L +DV A+EYL + V
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGNN----FV 311
Query: 166 HCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPK 225
H DL N+L+ E+ VA+VSDFG++K E S TQ + + AP + L+ K
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-----EALREK 361
Query: 226 NAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP------TDEMFTGEISLKNWVNESLPH 278
KF S K DV+SFG+LL E ++ G+ P D + E K + P
Sbjct: 362 --KF------STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP 413
Query: 279 ALTDV------VDANLRVSMKDVAAKLKKIRVKFLY 308
A+ DV +DA R + + +L+ IR L+
Sbjct: 414 AVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHELH 449
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 35/290 (12%)
Query: 33 SYLDIQRATEGFNE-----C----NLLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG-- 79
+Y D RA F + C ++G G FG V G L +VA+ + L++G
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 80 -RAFRSFDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDT 138
+ R F E ++ H N++ + + +V+E M NG+L+ +L H+
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 139 LERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGED 198
++ + ++ + + YL + VH DL NIL++ N+V +VSDFG+S+++ D +
Sbjct: 145 IQLVGMLRGIAAGMRYL----ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPE 200
Query: 199 SV-TQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKK 256
+V T T + + AP + + KF ++ DV+S+G+++ E + G++
Sbjct: 201 AVYTTTGGKIPVRWTAPEAIQY-------RKF------TSASDVWSYGIVMWEVMSYGER 247
Query: 257 PTDEMFTGEISLKNWVNESLPHALTDVVDANLRVSMKDVAAKLKKIRVKF 306
P +M ++ LP + A L M D K + R KF
Sbjct: 248 PYWDMSNQDVIKAIEEGYRLPAPMD--CPAGLHQLMLDCWQKERAERPKF 295
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L +++ + L++G + R F E ++ H N++++
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+++L H+ ++ + ++ + ++YL S
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDMG 138
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S++L D E + T I + +P + +
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--- 195
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G++L E + G++P EM ++
Sbjct: 196 ----RKF------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 230
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L +++ + L++G + R F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+++L H+ ++ + ++ + ++YL S
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDMG 167
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S++L D E + T I + +P + +
Sbjct: 168 FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--- 224
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G++L E + G++P EM ++
Sbjct: 225 ----RKF------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L +++ + L++G + R F E ++ H N++++
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 99
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+++L H+ ++ + ++ + ++YL S
Sbjct: 100 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDMG 155
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S++L D E + T I + +P + +
Sbjct: 156 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--- 212
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G++L E + G++P EM ++
Sbjct: 213 ----RKF------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 247
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L +++ + L++G + R F E ++ H N++++
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+++L H+ ++ + ++ + ++YL S
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDMG 138
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S++L D E + T I + +P + +
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--- 195
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G++L E + G++P EM ++
Sbjct: 196 ----RKF------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 230
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 47/269 (17%)
Query: 48 NLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFD------SECEVLRNVHHRNL 100
+ LG G+FG V G G+ VA+K+ Q RS D E + L+ H ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
+K++ S P +V+E + G L +++ H ++ +E + + A++Y H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCH---- 128
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGE---DSVTQTMTMATIGYMAPVSQ 217
+VH DLKP N+LLD +M A+++DFG+S ++ DGE DS + Y AP
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC------GSPNYAAP--- 179
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE---------MFTGEISL 268
+ D++S GV+L G P D+ + G +
Sbjct: 180 ---------EVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI 230
Query: 269 KNWVNESLPHALTDV--VDANLRVSMKDV 295
++N S+ L + VD R ++KD+
Sbjct: 231 PEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L +++ + L++G + R F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+++L H+ ++ + ++ + ++YL S
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDMG 167
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S++L D E + T I + +P + +
Sbjct: 168 AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--- 224
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G++L E + G++P EM ++
Sbjct: 225 ----RKF------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L +++ + L++G + R F E ++ H N++++
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 109
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+++L H+ ++ + ++ + ++YL S
Sbjct: 110 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDMG 165
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S++L D E + T I + +P + +
Sbjct: 166 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--- 222
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G++L E + G++P EM ++
Sbjct: 223 ----RKF------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 257
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 128/276 (46%), Gaps = 44/276 (15%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS-CS 108
+G G FG V G GN VA+K K ++F +E V+ + H NL+++
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFL---DTLERLNIMIDVWLALEYLHHGHSSAPIV 165
+V E M GSL ++L S + D L L +DV A+EYL + V
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGNN----FV 139
Query: 166 HCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPK 225
H DL N+L+ E+ VA+VSDFG++K E S TQ + + AP + L+ K
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-----EALREK 189
Query: 226 NAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP------TDEMFTGEISLKNWVNESLPH 278
KF S K DV+SFG+LL E ++ G+ P D + E K + P
Sbjct: 190 --KF------STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP 241
Query: 279 ALTDV------VDANLRVSMKDVAAKLKKIRVKFLY 308
A+ +V +DA +R S + +L+ I+ L+
Sbjct: 242 AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHELH 277
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 126/276 (45%), Gaps = 44/276 (15%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS-CS 108
+G G FG V G GN VA+K K ++F +E V+ + H NL+++
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFL---DTLERLNIMIDVWLALEYLHHGHSSAPIV 165
+V E M GSL ++L S + D L L +DV A+EYL + V
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGNN----FV 130
Query: 166 HCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPK 225
H DL N+L+ E+ VA+VSDFG++K E S TQ + + AP + L+
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-----EALR-- 178
Query: 226 NAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP------TDEMFTGEISLKNWVNESLPH 278
E S K DV+SFG+LL E ++ G+ P D + E K + P
Sbjct: 179 ------EAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP 232
Query: 279 ALTDV------VDANLRVSMKDVAAKLKKIRVKFLY 308
A+ +V +DA +R S + +L+ I+ L+
Sbjct: 233 AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHELH 268
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L +++ + L++G + R F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+++L H+ ++ + ++ + ++YL S
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDMG 167
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S++L D E + T I + +P + +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--- 224
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G++L E + G++P EM ++
Sbjct: 225 ----RKF------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L +++ + L++G + R F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+++L H+ ++ + ++ + ++YL S
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDMG 167
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S++L D E + T I + +P + +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--- 224
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G++L E + G++P EM ++
Sbjct: 225 ----RKF------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 31/269 (11%)
Query: 44 FNECNLL---GTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHR 98
F + N L G ++KG GN++ +KV K++ R R F+ EC LR H
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 99 NLLKIFSSCSNP--DFKALVLELMPNGSLENWLYS-HNYFLDTLERLNIMIDVWLALEYL 155
N+L + +C +P L+ MP GSL N L+ N+ +D + + +D+ + +L
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL 127
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
H P L ++++DE+M AR+S + D + S M ++AP
Sbjct: 128 HTLEPLIP--RHALNSRSVMIDEDMTARIS-------MADVKFSFQSPGRMYAPAWVAP- 177
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK---NWV 272
+ L+ K E D++SF VLL E T + P ++ EI +K +
Sbjct: 178 ----EALQKK-----PEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGL 228
Query: 273 NESLPHALTDVVDANLRVSMKDVAAKLKK 301
++P ++ V +++ M + AK K
Sbjct: 229 RPTIPPGISPHVSKLMKICMNEDPAKRPK 257
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L +++ + L++G + R F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+++L H+ ++ + ++ + ++YL S
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDMG 167
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S++L D E + T I + +P + +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--- 224
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G++L E + G++P EM ++
Sbjct: 225 ----RKF------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L +++ + L++G + R F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+++L H+ ++ + ++ + ++YL S
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDMG 167
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S++L D E + T I + +P + +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--- 224
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G++L E + G++P EM ++
Sbjct: 225 ----RKF------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L +++ + L++G + R F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+++L H+ ++ + ++ + ++YL S
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDMG 167
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S++L D E + T I + +P + +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--- 224
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G++L E + G++P EM ++
Sbjct: 225 ----RKF------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 33 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V ++YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 148
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
+S VH DL N +LDE +V+DFG+++ + D E T A + PV
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKL----PVKW 202
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------KN 270
+ + + KF + K DV+SFGVLL E T G P ++ T +I++ +
Sbjct: 203 M-ALESLQTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 255
Query: 271 WVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
E P L +V+ A +R S ++ +++ I F+
Sbjct: 256 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VAIK K + SF E ++++ + H L+++++ S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 110 PDFKALVLELMPNGSLENWLY-SHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+V E M GSL ++L L +++ V + Y+ + +H D
Sbjct: 76 EPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN----YIHRD 130
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ ++ +++DFG+++L+ D E + Q I + AP + L+
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALY--------- 180
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 181 ----GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 31/226 (13%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRA---FRSFDSECEVLRNVHHRNLLKIF 104
+LG G V+ L D +VA+KV + L R + F E + ++H ++ ++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 105 SS--CSNP--DFKALVLELMPNGSLENWLYSHNYFLDTLER-LNIMIDVWLALEYLHHGH 159
+ P +V+E + +L + +++ T +R + ++ D AL + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPKRAIEVIADACQALNFSHQNG 136
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
I+H D+KP+NI++ +V DFGI++ + D +SVTQ T A IG
Sbjct: 137 ----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ--TAAVIGTA------- 183
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGE 265
L P+ A+ S + A+ DVYS G +L E TG+ P FTG+
Sbjct: 184 QYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 128/276 (46%), Gaps = 44/276 (15%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS-CS 108
+G G FG V G GN VA+K K ++F +E V+ + H NL+++
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFL---DTLERLNIMIDVWLALEYLHHGHSSAPIV 165
+V E M GSL ++L S + D L L +DV A+EYL + V
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLEGNN----FV 124
Query: 166 HCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPK 225
H DL N+L+ E+ VA+VSDFG++K E S TQ + + AP + L+ K
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP-----EALREK 174
Query: 226 NAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP------TDEMFTGEISLKNWVNESLPH 278
KF S K DV+SFG+LL E ++ G+ P D + E K + P
Sbjct: 175 --KF------STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP 226
Query: 279 ALTDV------VDANLRVSMKDVAAKLKKIRVKFLY 308
A+ +V +DA +R S + +L+ I+ L+
Sbjct: 227 AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHELH 262
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 123/289 (42%), Gaps = 56/289 (19%)
Query: 50 LGTGSFGIVYKGILSDGNN---------VAIKVFKLQLGRAFRSFDSECEVLRNVHHRNL 100
LG G+FG V+ L++ +N VA+K K A + F E E+L + H+++
Sbjct: 26 LGEGAFGKVF---LAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 82
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTL--------------ERLNIMI 146
++ F C+ +V E M +G L +L SH L + L +
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 147 DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM 206
V + YL H VH DL N L+ + +V ++ DFG+S+ + + TM
Sbjct: 143 QVAAGMVYLAGLH----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGE 265
I +M P S L+ KF +E DV+SFGV+L E FT GK+P ++ E
Sbjct: 199 LPIRWMPPESILYR-------KFTTES------DVWSFGVVLWEIFTYGKQPWYQLSNTE 245
Query: 266 I--SLKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKI 302
+ P A V + R S+KDV A+L+ +
Sbjct: 246 AIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 294
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 31/226 (13%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRA---FRSFDSECEVLRNVHHRNLLKIF 104
+LG G V+ L D +VA+KV + L R + F E + ++H ++ ++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 105 SS--CSNP--DFKALVLELMPNGSLENWLYSHNYFLDTLER-LNIMIDVWLALEYLHHGH 159
+ P +V+E + +L + +++ T +R + ++ D AL + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPKRAIEVIADACQALNFSHQNG 136
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
I+H D+KP+NI++ +V DFGI++ + D +SVTQ T A IG
Sbjct: 137 ----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ--TAAVIG-------TA 183
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGE 265
L P+ A+ S + A+ DVYS G +L E TG+ P FTG+
Sbjct: 184 QYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 123/289 (42%), Gaps = 56/289 (19%)
Query: 50 LGTGSFGIVYKGILSDGNN---------VAIKVFKLQLGRAFRSFDSECEVLRNVHHRNL 100
LG G+FG V+ L++ +N VA+K K A + F E E+L + H+++
Sbjct: 20 LGEGAFGKVF---LAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 76
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTL--------------ERLNIMI 146
++ F C+ +V E M +G L +L SH L + L +
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 147 DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM 206
V + YL H VH DL N L+ + +V ++ DFG+S+ + + TM
Sbjct: 137 QVAAGMVYLAGLH----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGE 265
I +M P S L+ KF +E DV+SFGV+L E FT GK+P ++ E
Sbjct: 193 LPIRWMPPESILYR-------KFTTES------DVWSFGVVLWEIFTYGKQPWYQLSNTE 239
Query: 266 I--SLKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKI 302
+ P A V + R S+KDV A+L+ +
Sbjct: 240 AIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 288
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G ++ VA+K K + ++F E +++ + H L+++++ +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
+ ++ E M GSL ++L S L +L + + + Y+ + +H D
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN----YIHRD 135
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +N+L+ E+++ +++DFG+++++ D E + + I + AP + F
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINF--------- 185
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
G + K DV+SFG+LL E T GK P
Sbjct: 186 ----GCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 123/289 (42%), Gaps = 56/289 (19%)
Query: 50 LGTGSFGIVYKGILSDGNN---------VAIKVFKLQLGRAFRSFDSECEVLRNVHHRNL 100
LG G+FG V+ L++ +N VA+K K A + F E E+L + H+++
Sbjct: 49 LGEGAFGKVF---LAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 105
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTL--------------ERLNIMI 146
++ F C+ +V E M +G L +L SH L + L +
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 147 DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM 206
V + YL H VH DL N L+ + +V ++ DFG+S+ + + TM
Sbjct: 166 QVAAGMVYLAGLH----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGE 265
I +M P S L+ KF +E DV+SFGV+L E FT GK+P ++ E
Sbjct: 222 LPIRWMPPESILYR-------KFTTE------SDVWSFGVVLWEIFTYGKQPWYQLSNTE 268
Query: 266 I--SLKNWVNESLPHALTDVV----------DANLRVSMKDVAAKLKKI 302
+ P A V + R S+KDV A+L+ +
Sbjct: 269 AIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 29 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V ++YL
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 144
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
+S VH DL N +LDE +V+DFG+++ + D E T A + PV
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL----PVKW 198
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------KN 270
+ + + KF + K DV+SFGVLL E T G P ++ T +I++ +
Sbjct: 199 M-ALESLQTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 251
Query: 271 WVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
E P L +V+ A +R S ++ +++ I F+
Sbjct: 252 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 32 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V ++YL
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 147
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
+S VH DL N +LDE +V+DFG+++ + D E T A + PV
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL----PVKW 201
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------KN 270
+ + + KF + K DV+SFGVLL E T G P ++ T +I++ +
Sbjct: 202 M-ALESLQTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 254
Query: 271 WVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
E P L +V+ A +R S ++ +++ I F+
Sbjct: 255 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 34 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V ++YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 149
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
+S VH DL N +LDE +V+DFG+++ + D E T A + PV
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL----PVKW 203
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------KN 270
+ + + KF + K DV+SFGVLL E T G P ++ T +I++ +
Sbjct: 204 M-ALESLQTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 256
Query: 271 WVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
E P L +V+ A +R S ++ +++ I F+
Sbjct: 257 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 33 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V ++YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 148
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
+S VH DL N +LDE +V+DFG+++ + D E T A + PV
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL----PVKW 202
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------KN 270
+ + + KF + K DV+SFGVLL E T G P ++ T +I++ +
Sbjct: 203 M-ALESLQTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 255
Query: 271 WVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
E P L +V+ A +R S ++ +++ I F+
Sbjct: 256 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 52 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 109
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V ++YL
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 167
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
+S VH DL N +LDE +V+DFG+++ + D E T A + PV
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL----PVKW 221
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------KN 270
+ + + KF + K DV+SFGVLL E T G P ++ T +I++ +
Sbjct: 222 M-ALESLQTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 274
Query: 271 WVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
E P L +V+ A +R S ++ +++ I F+
Sbjct: 275 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 317
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 26 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V ++YL
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 141
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
+S VH DL N +LDE +V+DFG+++ + D E T A + PV
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL----PVKW 195
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------KN 270
+ + + KF + K DV+SFGVLL E T G P ++ T +I++ +
Sbjct: 196 M-ALESLQTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 248
Query: 271 WVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
E P L +V+ A +R S ++ +++ I F+
Sbjct: 249 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 291
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 31 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V ++YL
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 146
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
+S VH DL N +LDE +V+DFG+++ + D E T A + PV
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL----PVKW 200
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------KN 270
+ + + KF + K DV+SFGVLL E T G P ++ T +I++ +
Sbjct: 201 M-ALESLQTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 253
Query: 271 WVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
E P L +V+ A +R S ++ +++ I F+
Sbjct: 254 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 296
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L +++ + L++G + R F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+++L H+ ++ + ++ + ++YL S
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDMG 167
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG++++L D E + T I + +P + +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--- 224
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G++L E + G++P EM ++
Sbjct: 225 ----RKF------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 53 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 110
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V ++YL
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 168
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
+S VH DL N +LDE +V+DFG+++ + D E T A + PV
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL----PVKW 222
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------KN 270
+ + + KF + K DV+SFGVLL E T G P ++ T +I++ +
Sbjct: 223 M-ALESLQTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 275
Query: 271 WVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
E P L +V+ A +R S ++ +++ I F+
Sbjct: 276 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 318
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 34 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V ++YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL-- 149
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
+S VH DL N +LDE +V+DFG+++ + D E T A + PV
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL----PVKW 203
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------KN 270
+ + + KF + K DV+SFGVLL E T G P ++ T +I++ +
Sbjct: 204 M-ALESLQTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 256
Query: 271 WVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
E P L +V+ A +R S ++ +++ I F+
Sbjct: 257 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 40/254 (15%)
Query: 18 IAPIDLLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKL 76
+ P D LP + Y + ++ +++G G +V + + + G+ A+K+ ++
Sbjct: 77 MGPEDELPDWAAAKEFY-------QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEV 129
Query: 77 --------QLGRAFRSFDSECEVLRNVH-HRNLLKIFSSCSNPDFKALVLELMPNGSLEN 127
QL + E +LR V H +++ + S + F LV +LM G L +
Sbjct: 130 TAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFD 189
Query: 128 WLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDF 187
+L + L E +IM + A+ +LH + IVH DLKP NILLD+NM R+SDF
Sbjct: 190 YL-TEKVALSEKETRSIMRSLLEAVSFLHANN----IVHRDLKPENILLDDNMQIRLSDF 244
Query: 188 GISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK----PKNAKFGSEGIISAKCDVYS 243
G S L GE T GY+AP +ILK + +G E D+++
Sbjct: 245 GFSCHLEPGE---KLRELCGTPGYLAP-----EILKCSMDETHPGYGKE------VDLWA 290
Query: 244 FGVLLMETFTGKKP 257
GV+L G P
Sbjct: 291 CGVILFTLLAGSPP 304
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 40/285 (14%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 34 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V +++L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 149
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGE-DSV-TQTMTMATIGYMAPV 215
+S VH DL N +LDE +V+DFG+++ + D E DSV +T + +MA
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------ 268
S + KF + K DV+SFGVLL E T G P ++ T +I++
Sbjct: 208 SL-------QTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Query: 269 KNWVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
+ E P L +V+ A +R S ++ +++ I F+
Sbjct: 255 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 40/285 (14%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 32 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V +++L
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 147
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGE-DSV-TQTMTMATIGYMAPV 215
+S VH DL N +LDE +V+DFG+++ + D E DSV +T + +MA
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------ 268
S + KF + K DV+SFGVLL E T G P ++ T +I++
Sbjct: 206 SL-------QTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 252
Query: 269 KNWVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
+ E P L +V+ A +R S ++ +++ I F+
Sbjct: 253 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 40/285 (14%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 93 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V +++L
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 208
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGE-DSV-TQTMTMATIGYMAPV 215
+S VH DL N +LDE +V+DFG+++ + D E DSV +T + +MA
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------ 268
S + KF + K DV+SFGVLL E T G P ++ T +I++
Sbjct: 267 SL-------QTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 313
Query: 269 KNWVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
+ E P L +V+ A +R S ++ +++ I F+
Sbjct: 314 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 45/268 (16%)
Query: 48 NLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFD------SECEVLRNVHHRNL 100
+ LG G+FG V G G+ VA+K+ Q RS D E + L+ H ++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQ---KIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
+K++ S P +V+E + G L +++ N LD E + + ++Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHM- 136
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFD 220
+VH DLKP N+LLD +M A+++DFG+S ++ DGE + + Y AP
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAP------ 184
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE---------MFTGEISLKNW 271
+ D++S GV+L G P D+ + G +
Sbjct: 185 ------EVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQY 238
Query: 272 VNES----LPHALTDVVDANLRVSMKDV 295
+N S L H L VD R ++KD+
Sbjct: 239 LNPSVISLLKHMLQ--VDPMKRATIKDI 264
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILS--DGNNVAIKVFKLQLG---RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L +++ + L++G + R F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+++L H+ ++ + ++ + ++YL S
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL----SDMG 167
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+ ++L D E + T I + +P + +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--- 224
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G++L E + G++P EM ++
Sbjct: 225 ----RKF------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 40/285 (14%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 34 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V +++L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 149
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGE-DSV-TQTMTMATIGYMAPV 215
+S VH DL N +LDE +V+DFG+++ + D E DSV +T + +MA
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------ 268
S + KF + K DV+SFGVLL E T G P ++ T +I++
Sbjct: 208 SL-------QTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
Query: 269 KNWVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
+ E P L +V+ A +R S ++ +++ I F+
Sbjct: 255 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H D
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 136
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINY--------- 186
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 187 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 221
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H D
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 140
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINY--------- 190
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 191 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 40/285 (14%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 39 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V +++L
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 154
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGE-DSV-TQTMTMATIGYMAPV 215
+S VH DL N +LDE +V+DFG+++ + D E DSV +T + +MA
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------ 268
S + KF + K DV+SFGVLL E T G P ++ T +I++
Sbjct: 213 SL-------QTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 259
Query: 269 KNWVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
+ E P L +V+ A +R S ++ +++ I F+
Sbjct: 260 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 304
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 31/226 (13%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRA---FRSFDSECEVLRNVHHRNLLKIF 104
+LG G V+ L D +VA+KV + L R + F E + ++H ++ ++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 105 SS--CSNP--DFKALVLELMPNGSLENWLYSHNYFLDTLER-LNIMIDVWLALEYLHHGH 159
+ P +V+E + +L + +++ T +R + ++ D AL + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPKRAIEVIADACQALNFSHQNG 136
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
I+H D+KP+NIL+ +V DFGI++ + D +SV Q T A IG
Sbjct: 137 ----IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ--TAAVIGTA------- 183
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGE 265
L P+ A+ S + A+ DVYS G +L E TG+ P FTG+
Sbjct: 184 QYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK-- 102
LG G+FG V Y + + G VA+K + R F E ++L+ +H ++K
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 103 -IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
+ P+ + LV+E +P+G L ++L H LD L + +EYL S
Sbjct: 75 GVSYGPGRPELR-LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GS 129
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLG-DGEDSVTQTMTMATIGYMAPVSQLFD 220
VH DL NIL++ +++DFG++KLL D + V + + I + AP S
Sbjct: 130 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL--- 186
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
S+ I S + DV+SFGV+L E FT
Sbjct: 187 ----------SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H D
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINY--------- 184
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 185 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H D
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINY--------- 184
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 185 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 40/285 (14%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 35 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V +++L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 150
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGE-DSV-TQTMTMATIGYMAPV 215
+S VH DL N +LDE +V+DFG+++ + D E DSV +T + +MA
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------ 268
S + KF + K DV+SFGVLL E T G P ++ T +I++
Sbjct: 209 SL-------QTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 255
Query: 269 KNWVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
+ E P L +V+ A +R S ++ +++ I F+
Sbjct: 256 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H D
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 142
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINY--------- 192
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 193 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 227
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F E ++L+ +H ++K
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 105 SSCSNPDFKAL--VLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
P ++L V+E +P+G L ++L H LD L + +EYL S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GSR 134
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLLG-DGEDSVTQTMTMATIGYMAPVSQLFDI 221
VH DL NIL++ +++DFG++KLL D + V + + I + AP S
Sbjct: 135 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL---- 190
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
S+ I S + DV+SFGV+L E FT
Sbjct: 191 ---------SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H D
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 135
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINY--------- 185
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 186 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 220
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H D
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 143
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINY--------- 193
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 194 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 228
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F E ++L+ +H ++K
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 105 SSCSNPDFKAL--VLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
P ++L V+E +P+G L ++L H LD L + +EYL S
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GSR 133
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLLG-DGEDSVTQTMTMATIGYMAPVSQLFDI 221
VH DL NIL++ +++DFG++KLL D + V + + I + AP S
Sbjct: 134 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL---- 189
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
S+ I S + DV+SFGV+L E FT
Sbjct: 190 ---------SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 50 LGTGSFGIV----YKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
LG G+FG V Y + + G VA+K + R F E ++L+ +H ++K
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 105 SSCSNPDFKAL--VLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
P ++L V+E +P+G L ++L H LD L + +EYL S
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----GSR 146
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLLG-DGEDSVTQTMTMATIGYMAPVSQLFDI 221
VH DL NIL++ +++DFG++KLL D + V + + I + AP S
Sbjct: 147 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL---- 202
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
S+ I S + DV+SFGV+L E FT
Sbjct: 203 ---------SDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 109 -NPDFKALVLELMPNGSLENWLYSHNYF-LDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
P F +V E MP G+L ++L N + + L + + A+EYL + +H
Sbjct: 99 LEPPF-YIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN----FIH 153
Query: 167 CDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKN 226
DL N L+ EN V +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTF---- 208
Query: 227 AKFGSEGIISAKCDVYSFGVLLMETFT 253
S K DV++FGVLL E T
Sbjct: 209 ---------SIKSDVWAFGVLLWEIAT 226
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 40/285 (14%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHR 98
FNE ++G G FG VY G L D + I L R F +E ++++ H
Sbjct: 35 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 99 NLLKIFSSCSNPDFKALV-LELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L + C + LV L M +G L N++ + + + + + V +++L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL-- 150
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGE-DSV-TQTMTMATIGYMAPV 215
+S VH DL N +LDE +V+DFG+++ + D E DSV +T + +MA
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISL------ 268
S + KF + K DV+SFGVLL E T G P ++ T +I++
Sbjct: 209 SL-------QTQKF------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 255
Query: 269 KNWVNESLPHALTDVV------DANLRVSMKDVAAKLKKIRVKFL 307
+ E P L +V+ A +R S ++ +++ I F+
Sbjct: 256 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 110/227 (48%), Gaps = 26/227 (11%)
Query: 49 LLGTGSFGIVYKGILSDGNN----VAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V +G L VAIK K R R F SE ++ H N++++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+N ++ E M NG+L+++L ++ ++ + ++ + + YL +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL----AEMS 138
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA---TIGYMAPVSQLFD 220
VH DL NIL++ N+V +VSDFG+S+ L + T+T ++ I + AP + F
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAF- 197
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ D +S+G+++ E + G++P +M ++
Sbjct: 198 ------RKF------TSASDAWSYGIVMWEVMSFGERPYWDMSNQDV 232
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
+++E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 136
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYN------- 188
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 189 KF------SIKSDVWAFGVLLWEIAT 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H D
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 140
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINY--------- 190
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 191 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H D
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 139
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINY--------- 189
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 190 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 224
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G ++ VA+K K + ++F E +++ + H L+++++ +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
+ ++ E M GSL ++L S L +L + + + Y+ + +H D
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN----YIHRD 134
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +N+L+ E+++ +++DFG+++++ D E + + I + AP + F
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINF--------- 184
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
G + K +V+SFG+LL E T GK P
Sbjct: 185 ----GCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H D
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 129
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINY--------- 179
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 180 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H D
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINY--------- 184
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 185 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 121/260 (46%), Gaps = 33/260 (12%)
Query: 50 LGTGSFGIVYKG--ILSDGNNVAIKVF-KLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS 106
+GTG F V IL+ G VAIK+ K LG +E E L+N+ H+++ +++
Sbjct: 18 IGTGGFAKVKLACHILT-GEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
+ +VLE P G L +++ S + + R+ + + A+ Y+H S H
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVH----SQGYAH 131
Query: 167 CDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKN 226
DLKP N+L DE ++ DFG+ +D QT ++ Y AP ++++ K
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAP-----ELIQGK- 184
Query: 227 AKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE---------MFTGEISLKNWVNESLP 277
+ GSE DV+S G+LL G P D+ + G+ + W++ S
Sbjct: 185 SYLGSEA------DVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSI 238
Query: 278 HALTDV--VDANLRVSMKDV 295
L + VD R+SMK++
Sbjct: 239 LLLQQMLQVDPKKRISMKNL 258
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 30/206 (14%)
Query: 68 NVAIKVFKLQLGRA---FRSFDSECEVLRNVHHRNLLKIFSS--CSNP--DFKALVLELM 120
+VA+KV + L R + F E + ++H ++ ++++ P +V+E +
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYV 98
Query: 121 PNGSLENWLYSHNYFLDTLER-LNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDEN 179
+L + +++ T +R + ++ D AL + H I+H D+KP+NI++
Sbjct: 99 DGVTLRDIVHTEGPM--TPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISAT 152
Query: 180 MVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKC 239
+V DFGI++ + D +SVTQ T A IG L P+ A+ S + A+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQ--TAAVIGTA-------QYLSPEQARGDS---VDARS 200
Query: 240 DVYSFGVLLMETFTGKKPTDEMFTGE 265
DVYS G +L E TG+ P FTG+
Sbjct: 201 DVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G FG VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N + + L + + A+EYL + +H
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 133
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYN------- 185
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 186 KF------SIKSDVWAFGVLLWEIAT 205
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 115/268 (42%), Gaps = 53/268 (19%)
Query: 23 LLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKG-ILSDG--NNVAIKVFKLQLG 79
+ PV W + D+ +G G+FG V K I DG + AIK K
Sbjct: 18 IYPVLDWNDIKFQDV------------IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS 65
Query: 80 RA-FRSFDSECEVLRNV-HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYF-- 135
+ R F E EVL + HH N++ + +C + + L +E P+G+L ++L
Sbjct: 66 KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLET 125
Query: 136 -------------LDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVA 182
L + + L+ DV ++YL S +H DL NIL+ EN VA
Sbjct: 126 DPAFAIANSTASTLSSQQLLHFAADVARGMDYL----SQKQFIHRDLAARNILVGENYVA 181
Query: 183 RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVY 242
+++DFG+S+ E V +TM + +MA S + + + DV+
Sbjct: 182 KIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNY-------------SVYTTNSDVW 225
Query: 243 SFGVLLMETFT-GKKPTDEMFTGEISLK 269
S+GVLL E + G P M E+ K
Sbjct: 226 SYGVLLWEIVSLGGTPYCGMTCAELYEK 253
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
+++E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 140
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 192
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 193 KF------SIKSDVWAFGVLLWEIAT 212
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H D
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 144
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINY--------- 194
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 195 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 229
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
+++E M G+L ++L N + + L + + A+EYL + +H
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 133
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYN------- 185
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 186 KF------SIKSDVWAFGVLLWEIAT 205
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 115/268 (42%), Gaps = 53/268 (19%)
Query: 23 LLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKG-ILSDG--NNVAIKVFKLQLG 79
+ PV W + D+ +G G+FG V K I DG + AIK K
Sbjct: 8 IYPVLDWNDIKFQDV------------IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS 55
Query: 80 RA-FRSFDSECEVLRNV-HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYF-- 135
+ R F E EVL + HH N++ + +C + + L +E P+G+L ++L
Sbjct: 56 KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLET 115
Query: 136 -------------LDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVA 182
L + + L+ DV ++YL S +H DL NIL+ EN VA
Sbjct: 116 DPAFAIANSTASTLSSQQLLHFAADVARGMDYL----SQKQFIHRDLAARNILVGENYVA 171
Query: 183 RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVY 242
+++DFG+S+ E V +TM + +MA S + + + DV+
Sbjct: 172 KIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNY-------------SVYTTNSDVW 215
Query: 243 SFGVLLMETFT-GKKPTDEMFTGEISLK 269
S+GVLL E + G P M E+ K
Sbjct: 216 SYGVLLWEIVSLGGTPYCGMTCAELYEK 243
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 26/265 (9%)
Query: 49 LLGTGSFGIVYKGILS-DGNN---VAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L G VAIK K+ + R F E ++ H N++ +
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +V E M NGSL+ +L ++ ++ + ++ + ++YL S
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL----SDMG 144
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S++L D E + T I + AP + F
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF--- 201
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEISLKNWVNESLPHALT 281
KF ++ DV+S+G+++ E + G++P EM ++ LP +
Sbjct: 202 ----RKF------TSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMD 251
Query: 282 DVVDANLRVSMKDVAAKLKKIRVKF 306
A L M D K + R KF
Sbjct: 252 --CPAALYQLMLDCWQKERNSRPKF 274
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 50 LGTGSFGIVYKGILSDGN----NVAIKVFK---LQLGRAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+V +G + +VA+K K L A F E + ++ HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSH--NYFLDTLERLNIMIDVWLALEYLHHGHS 160
++ P K +V EL P GSL + L H ++ L TL R + + + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE--GMGYL----E 132
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS-VTQTMTMATIGYMAPVSQLF 219
S +H DL N+LL + ++ DFG+ + L +D V Q + AP S
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES--- 189
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
LK + S D + FGV L E FT G++P
Sbjct: 190 --LKTRT--------FSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 50 LGTGSFGIVYKGILSDGN----NVAIKVFK---LQLGRAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+V +G + +VA+K K L A F E + ++ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSH--NYFLDTLERLNIMIDVWLALEYLHHGHS 160
++ P K +V EL P GSL + L H ++ L TL R + + + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE--GMGYL----E 128
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGED-SVTQTMTMATIGYMAPVSQLF 219
S +H DL N+LL + ++ DFG+ + L +D V Q + AP S
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES--- 185
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
LK + S D + FGV L E FT G++P
Sbjct: 186 --LKTRT--------FSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 50 LGTGSFGIVYKGILSDGN----NVAIKVFK---LQLGRAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+V +G + +VA+K K L A F E + ++ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSH--NYFLDTLERLNIMIDVWLALEYLHHGHS 160
++ P K +V EL P GSL + L H ++ L TL R + + + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE--GMGYL----E 128
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS-VTQTMTMATIGYMAPVSQLF 219
S +H DL N+LL + ++ DFG+ + L +D V Q + AP S
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES--- 185
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
LK + S D + FGV L E FT G++P
Sbjct: 186 --LKTRT--------FSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 50 LGTGSFGIVYKGILSDGN----NVAIKVFK---LQLGRAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+V +G + +VA+K K L A F E + ++ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSH--NYFLDTLERLNIMIDVWLALEYLHHGHS 160
++ P K +V EL P GSL + L H ++ L TL R + + + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE--GMGYL----E 128
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS-VTQTMTMATIGYMAPVSQLF 219
S +H DL N+LL + ++ DFG+ + L +D V Q + AP S
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES--- 185
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
LK + S D + FGV L E FT G++P
Sbjct: 186 --LKTRT--------FSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 50 LGTGSFGIVYKGILSDGN----NVAIKVFK---LQLGRAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+V +G + +VA+K K L A F E + ++ HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSH--NYFLDTLERLNIMIDVWLALEYLHHGHS 160
++ P K +V EL P GSL + L H ++ L TL R + + + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE--GMGYL----E 132
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS-VTQTMTMATIGYMAPVSQLF 219
S +H DL N+LL + ++ DFG+ + L +D V Q + AP S
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES--- 189
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
LK + S D + FGV L E FT G++P
Sbjct: 190 --LKTRT--------FSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 50 LGTGSFGIVYKGILSDGN----NVAIKVFK---LQLGRAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+V +G + +VA+K K L A F E + ++ HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSH--NYFLDTLERLNIMIDVWLALEYLHHGHS 160
++ P K +V EL P GSL + L H ++ L TL R + + + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE--GMGYL----E 138
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGED-SVTQTMTMATIGYMAPVSQLF 219
S +H DL N+LL + ++ DFG+ + L +D V Q + AP S
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES--- 195
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
LK + S D + FGV L E FT G++P
Sbjct: 196 --LKTRT--------FSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 50 LGTGSFGIVYKGILSDGN----NVAIKVFK---LQLGRAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+V +G + +VA+K K L A F E + ++ HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSH--NYFLDTLERLNIMIDVWLALEYLHHGHS 160
++ P K +V EL P GSL + L H ++ L TL R + + + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE--GMGYL----E 138
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS-VTQTMTMATIGYMAPVSQLF 219
S +H DL N+LL + ++ DFG+ + L +D V Q + AP S
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES--- 195
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
LK + S D + FGV L E FT G++P
Sbjct: 196 --LKTRT--------FSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
+++E M G+L ++L N + + L + + A+EYL + +H
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 135
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 187
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 188 KF------SIKSDVWAFGVLLWEIAT 207
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 30/206 (14%)
Query: 68 NVAIKVFKLQLGRA---FRSFDSECEVLRNVHHRNLLKIFSS--CSNP--DFKALVLELM 120
+VA+KV + L R + F E + ++H ++ ++ + P +V+E +
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 121 PNGSLENWLYSHNYFLDTLER-LNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDEN 179
+L + +++ T +R + ++ D AL + H I+H D+KP+NI++
Sbjct: 99 DGVTLRDIVHTEGPM--TPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISAT 152
Query: 180 MVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKC 239
+V DFGI++ + D +SVTQ T A IG L P+ A+ S + A+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQ--TAAVIGTA-------QYLSPEQARGDS---VDARS 200
Query: 240 DVYSFGVLLMETFTGKKPTDEMFTGE 265
DVYS G +L E TG+ P FTG+
Sbjct: 201 DVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
+++E M G+L ++L N + + L + + A+EYL + +H
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 135
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 187
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 188 KF------SIKSDVWAFGVLLWEIAT 207
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 140
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYN------- 192
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 193 KF------SIKSDVWAFGVLLWEIAT 212
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ + VA+K K + +F +E V++ + H L+K+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M GSL ++L S L +L + + + ++ + +H D
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN----YIHRD 136
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ ++V +++DFG+++++ D E + + G P+ P+
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIEDNEYTARE-------GAKFPIKW----TAPEAIN 185
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
FGS + K DV+SFG+LLME T G+ P M E+
Sbjct: 186 FGS---FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 221
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 48 NLLGTGSFGIVYKGILSDGNN----VAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLK 102
++G G FG V +G L VAIK K R R F SE ++ H N+++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ +N ++ E M NG+L+++L ++ ++ + ++ + + YL +
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL----AEM 135
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA---TIGYMAPVSQLF 219
VH DL NIL++ N+V +VSDFG+S+ L + T T ++ I + AP + F
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEM 261
KF ++ D +S+G+++ E + G++P +M
Sbjct: 196 -------RKF------TSASDAWSYGIVMWEVMSFGERPYWDM 225
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 29/246 (11%)
Query: 25 PVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRS 84
P W + ++ +I R E LG G FG V+ + VA+K K + +
Sbjct: 174 PQKPWEKDAW-EIPR--ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEA 229
Query: 85 FDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERL-N 143
F +E V++ + H L+K+ + + ++ E M GSL ++L S L +L +
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLID 288
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + ++ + +H DL+ +NIL+ ++V +++DFG+++++ D E
Sbjct: 289 FSAQIAEGMAFIEQRN----YIHRDLRAANILVSASLVCKIADFGLARVIEDNE------ 338
Query: 204 MTMATIGYMAPVSQLFDI--LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDE 260
Y A F I P+ FGS + K DV+SFG+LLME T G+ P
Sbjct: 339 -------YTAREGAKFPIKWTAPEAINFGS---FTIKSDVWSFGILLMEIVTYGRIPYPG 388
Query: 261 MFTGEI 266
M E+
Sbjct: 389 MSNPEV 394
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 137
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 189
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 190 KF------SIKSDVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 140
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 192
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 193 KF------SIKSDVWAFGVLLWEIAT 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 135
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 187
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 188 KF------SIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 139
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 191
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 192 KF------SIKSDVWAFGVLLWEIAT 211
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 30/206 (14%)
Query: 68 NVAIKVFKLQLGRA---FRSFDSECEVLRNVHHRNLLKIFSS--CSNP--DFKALVLELM 120
+VA+KV + L R + F E + ++H ++ ++ + P +V+E +
Sbjct: 56 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 115
Query: 121 PNGSLENWLYSHNYFLDTLER-LNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDEN 179
+L + +++ T +R + ++ D AL + H I+H D+KP+NI++
Sbjct: 116 DGVTLRDIVHTEGPM--TPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISAT 169
Query: 180 MVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKC 239
+V DFGI++ + D +SVTQ T A IG L P+ A+ S + A+
Sbjct: 170 NAVKVMDFGIARAIADSGNSVTQ--TAAVIG-------TAQYLSPEQARGDS---VDARS 217
Query: 240 DVYSFGVLLMETFTGKKPTDEMFTGE 265
DVYS G +L E TG+ P FTG+
Sbjct: 218 DVYSLGCVLYEVLTGEPP----FTGD 239
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 140
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 192
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 193 KF------SIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 135
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 187
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 188 KF------SIKSDVWAFGVLLWEIAT 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 27/209 (12%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 136
Query: 168 DLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI--LKP 224
DL N L+ EN + +V+DFG+S+L+ GD Y AP F I P
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGD--------------TYTAPAGAKFPIKWTAP 182
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFT 253
++ + S K DV++FGVLL E T
Sbjct: 183 ESLAYNK---FSIKSDVWAFGVLLWEIAT 208
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 137
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 189
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 190 KF------SIKSDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 148
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 200
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 201 KF------SIKSDVWAFGVLLWEIAT 220
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 27/209 (12%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 137
Query: 168 DLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI--LKP 224
DL N L+ EN + +V+DFG+S+L+ GD Y AP F I P
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGD--------------TYTAPAGAKFPIKWTAP 183
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFT 253
++ + S K DV++FGVLL E T
Sbjct: 184 ESLAYNK---FSIKSDVWAFGVLLWEIAT 209
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N + + L + + A+EYL + +H
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 135
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 187
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 188 KF------SIKSDVWAFGVLLWEIAT 207
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 50 LGTGSFGIVYKGILSDGNN-----VAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLLKI 103
LG G FG V N+ VA+K K G RS + E ++LR ++H +++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 104 FSSCSNPDFKAL--VLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
C + +L V+E +P GSL ++L H+ L L L + + YLH H
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL--LLFAQQICEGMAYLHAQH-- 154
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMAPVSQLFD 220
+H DL N+LLD + + ++ DFG++K + +G + + + + + AP +
Sbjct: 155 --YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAP-----E 207
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
LK + S DV+SFGV L E T
Sbjct: 208 CLKEYKFYYAS--------DVWSFGVTLYELLT 232
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N + + L + + A+EYL + +H
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 140
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 192
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 193 KF------SIKSDVWAFGVLLWEIAT 212
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 50 LGTGSFGIVYKGILSDGNN-----VAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLLKI 103
LG G FG V N+ VA+K K G RS + E ++LR ++H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 104 FSSCSNPDFKAL--VLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
C + K+L V+E +P GSL ++L H+ L L L + + YLH H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL--LLFAQQICEGMAYLHSQH-- 137
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMAPVSQLFD 220
+H +L N+LLD + + ++ DFG++K + +G + + + + + AP +
Sbjct: 138 --YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP-----E 190
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
LK + S DV+SFGV L E T
Sbjct: 191 CLKEYKFYYAS--------DVWSFGVTLYELLT 215
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 116/258 (44%), Gaps = 26/258 (10%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNV----AIKVFKLQLG-RAFRSFDSE 88
L I + TE + +LG+G+FG VYKGI + DG NV AIKV + +A + E
Sbjct: 11 LRILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDE 69
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+ V + ++ C + LV +LMP G L + + + L + + LN + +
Sbjct: 70 AYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI 128
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ YL +VH DL N+L+ +++DFG+++LL E
Sbjct: 129 AKGMSYLE----DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP 184
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
I +MA L IL+ + + + DV+S+GV + E T G KP D + EI
Sbjct: 185 IKWMA----LESILRRR---------FTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIP 231
Query: 268 LKNWVNESLPHALTDVVD 285
E LP +D
Sbjct: 232 DLLEKGERLPQPPICTID 249
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FG V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H +
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRN 130
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINY--------- 180
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 181 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 215
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N + + L + + A+EYL + +H
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 135
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 187
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 188 KF------SIKSDVWAFGVLLWEIAT 207
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G G V+ G + VA+K K Q + +F +E +++ + H+ L+++++ +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHHGHSSAPIVHCD 168
++ E M NGSL ++L + + T+ +L ++ + + ++ + +H D
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRD 134
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
L+ +NIL+ + + +++DFG+++L+ D E + + I + AP + +
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP-IKWTAPEAINY--------- 184
Query: 229 FGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
G + K DV+SFG+LL E T G+ P M E+
Sbjct: 185 ----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 50 LGTGSFGIVYKGILSDGNN-----VAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLLKI 103
LG G FG V N+ VA+K K G RS + E ++LR ++H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 104 FSSCSNPDFKAL--VLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
C + K+L V+E +P GSL ++L H+ L L L + + YLH H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL--LLFAQQICEGMAYLHAQH-- 137
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMAPVSQLFD 220
+H +L N+LLD + + ++ DFG++K + +G + + + + + AP +
Sbjct: 138 --YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP-----E 190
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
LK + S DV+SFGV L E T
Sbjct: 191 CLKEYKFYYAS--------DVWSFGVTLYELLT 215
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 115/268 (42%), Gaps = 53/268 (19%)
Query: 23 LLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKG-ILSDG--NNVAIKVFKLQLG 79
+ PV W + D+ +G G+FG V K I DG + AIK K
Sbjct: 15 IYPVLDWNDIKFQDV------------IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS 62
Query: 80 RA-FRSFDSECEVLRNV-HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYF-- 135
+ R F E EVL + HH N++ + +C + + L +E P+G+L ++L
Sbjct: 63 KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLET 122
Query: 136 -------------LDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVA 182
L + + L+ DV ++YL S +H +L NIL+ EN VA
Sbjct: 123 DPAFAIANSTASTLSSQQLLHFAADVARGMDYL----SQKQFIHRNLAARNILVGENYVA 178
Query: 183 RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVY 242
+++DFG+S+ E V +TM + +MA S + + + DV+
Sbjct: 179 KIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNY-------------SVYTTNSDVW 222
Query: 243 SFGVLLMETFT-GKKPTDEMFTGEISLK 269
S+GVLL E + G P M E+ K
Sbjct: 223 SYGVLLWEIVSLGGTPYCGMTCAELYEK 250
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N + + L + + A+EYL + +H
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 133
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DL N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYN------- 185
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 186 KF------SIKSDVWAFGVLLWEIAT 205
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 119/236 (50%), Gaps = 32/236 (13%)
Query: 50 LGTGSFGIVYKGILSDG-NNVAIKVF---KLQLGRAFRS-----FDSECEVLRNVHHRNL 100
LG+G+ G V VAIK+ K +G A + ++E E+L+ ++H +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
+KI + D+ +VLELM G L + + + + +L + LA++YLH
Sbjct: 77 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYLHENG- 133
Query: 161 SAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP N+LL +E+ + +++DFG SK+L GE S+ +T+ T Y+AP
Sbjct: 134 ---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLC-GTPTYLAP--- 184
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVN 273
++L G+ G A D +S GV+L +G P E T ++SLK+ +
Sbjct: 185 --EVL----VSVGTAGYNRA-VDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQIT 232
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 119/236 (50%), Gaps = 32/236 (13%)
Query: 50 LGTGSFGIVYKGILSDG-NNVAIKVF---KLQLGRAFRS-----FDSECEVLRNVHHRNL 100
LG+G+ G V VAIK+ K +G A + ++E E+L+ ++H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
+KI + D+ +VLELM G L + + + + +L + LA++YLH
Sbjct: 78 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYLHENG- 134
Query: 161 SAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP N+LL +E+ + +++DFG SK+L GE S+ +T+ T Y+AP
Sbjct: 135 ---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLC-GTPTYLAP--- 185
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVN 273
++L G+ G A D +S GV+L +G P E T ++SLK+ +
Sbjct: 186 --EVL----VSVGTAGYNRA-VDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQIT 233
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 119/236 (50%), Gaps = 32/236 (13%)
Query: 50 LGTGSFGIVYKGILSDG-NNVAIKVF---KLQLGRAFRS-----FDSECEVLRNVHHRNL 100
LG+G+ G V VAIK+ K +G A + ++E E+L+ ++H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
+KI + D+ +VLELM G L + + + + +L + LA++YLH
Sbjct: 78 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYLHENG- 134
Query: 161 SAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP N+LL +E+ + +++DFG SK+L GE S+ +T+ T Y+AP
Sbjct: 135 ---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLC-GTPTYLAP--- 185
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVN 273
++L G+ G A D +S GV+L +G P E T ++SLK+ +
Sbjct: 186 --EVL----VSVGTAGYNRA-VDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQIT 233
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 119/236 (50%), Gaps = 32/236 (13%)
Query: 50 LGTGSFGIVYKGILSDG-NNVAIKVF---KLQLGRAFRS-----FDSECEVLRNVHHRNL 100
LG+G+ G V VAIK+ K +G A + ++E E+L+ ++H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
+KI + D+ +VLELM G L + + + + +L + LA++YLH
Sbjct: 78 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYLHENG- 134
Query: 161 SAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP N+LL +E+ + +++DFG SK+L GE S+ +T+ T Y+AP
Sbjct: 135 ---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLC-GTPTYLAP--- 185
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVN 273
++L G+ G A D +S GV+L +G P E T ++SLK+ +
Sbjct: 186 --EVL----VSVGTAGYNRA-VDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQIT 233
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 119/236 (50%), Gaps = 32/236 (13%)
Query: 50 LGTGSFGIVYKGILSDG-NNVAIKVF---KLQLGRAFRS-----FDSECEVLRNVHHRNL 100
LG+G+ G V VAIK+ K +G A + ++E E+L+ ++H +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
+KI + D+ +VLELM G L + + + + +L + LA++YLH
Sbjct: 84 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYLHENG- 140
Query: 161 SAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP N+LL +E+ + +++DFG SK+L GE S+ +T+ T Y+AP
Sbjct: 141 ---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLC-GTPTYLAP--- 191
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVN 273
++L G+ G A D +S GV+L +G P E T ++SLK+ +
Sbjct: 192 --EVL----VSVGTAGYNRA-VDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQIT 239
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 50 LGTGSFGIVYKGILSDGNN-----VAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLLKI 103
LG G FG V N+ VA+K K G RS + E E+LR ++H +++K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 104 FSSCSNPDFKA--LVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
C + K+ LV+E +P GSL ++L H L L L + + YLH H
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL--LLFAQQICEGMAYLHAQH-- 131
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMAPVSQLFD 220
+H L N+LLD + + ++ DFG++K + +G + + + + + AP +
Sbjct: 132 --YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP-----E 184
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
LK + S DV+SFGV L E T
Sbjct: 185 CLKECKFYYAS--------DVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 50 LGTGSFGIVYKGILSDGNN-----VAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLLKI 103
LG G FG V N+ VA+K K G RS + E E+LR ++H +++K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 104 FSSCSNPDFKA--LVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
C + K+ LV+E +P GSL ++L H L L L + + YLH H
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL--LLFAQQICEGMAYLHAQH-- 132
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMAPVSQLFD 220
+H L N+LLD + + ++ DFG++K + +G + + + + + AP +
Sbjct: 133 --YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP-----E 185
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
LK + S DV+SFGV L E T
Sbjct: 186 CLKECKFYYAS--------DVWSFGVTLYELLT 210
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 48 NLLGTGSFGIVYKGILS-DGNN---VAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLK 102
++G G FG V G L G VAIK K + R F SE ++ H N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ + ++ E M NGSL+++L ++ ++ + ++ + ++YL +
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL----ADM 154
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S+ L ED + + +G P+
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFL---EDDTSDPTYTSALGGKIPIRW----T 207
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
P+ ++ ++ DV+S+G+++ E + G++P +M ++
Sbjct: 208 APEAIQYRK---FTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 249
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 128/278 (46%), Gaps = 49/278 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS--DGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVH 96
+ F LGTGSFG V+ I S +G A+KV K ++ + + E +L V
Sbjct: 6 QDFQILRTLGTGSFGRVHL-IRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH 156
H +++++ + + ++++ + G L + L F + + + +V LALEYLH
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH 123
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP-- 214
S I++ DLKP NILLD+N +++DFG +K + D VT + T Y+AP
Sbjct: 124 ----SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLC-GTPDYIAPEV 174
Query: 215 VSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---------TDEMFTGE 265
VS KP N D +SFG+L+ E G P +++ E
Sbjct: 175 VS-----TKPYN----------KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE 219
Query: 266 ISLKNWVNESLPHALTDVVDANLRVSMKDVAAKLKKIR 303
+ + NE DV D R+ +D++ +L ++
Sbjct: 220 LRFPPFFNE-------DVKDLLSRLITRDLSQRLGNLQ 250
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 339
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
+L N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 391
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 392 KF------SIKSDVWAFGVLLWEIAT 411
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 24/225 (10%)
Query: 49 LLGTGSFGIVYKGILSDGNN----VAIKVFKLQL-GRAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG V G L VAIK K + R F SE ++ H N++ +
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ ++ E M NGSL+ +L ++ ++ + ++ + ++YL S
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL----SDMS 136
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH DL NIL++ N+V +VSDFG+S++L D E + T I + AP + +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY--- 193
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G+++ E + G++P +M ++
Sbjct: 194 ----RKF------TSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 228
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 24/226 (10%)
Query: 48 NLLGTGSFGIVYKGILSDGNN----VAIKVFKLQL-GRAFRSFDSECEVLRNVHHRNLLK 102
++G G FG V G L VAIK K + R F SE ++ H N++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ + ++ E M NGSL+ +L ++ ++ + ++ + ++YL S
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL----SDM 129
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
VH DL NIL++ N+V +VSDFG+S++L D E + T I + AP + +
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY-- 187
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G+++ E + G++P +M ++
Sbjct: 188 -----RKF------TSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 222
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ G+AF+ + E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 137 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 189
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 190 AP-----------ELIFGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQLV 233
Query: 273 N 273
Sbjct: 234 E 234
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N + + L + + A+EYL + +H
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN----FIHR 342
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
+L N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 394
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 395 KF------SIKSDVWAFGVLLWEIAT 414
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 24/226 (10%)
Query: 48 NLLGTGSFGIVYKGILSDGNN----VAIKVFKLQL-GRAFRSFDSECEVLRNVHHRNLLK 102
++G G FG V G L VAIK K + R F SE ++ H N++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ + ++ E M NGSL+ +L ++ ++ + ++ + ++YL S
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL----SDM 150
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLFDI 221
VH DL NIL++ N+V +VSDFG+S++L D E + T I + AP + +
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY-- 208
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF ++ DV+S+G+++ E + G++P +M ++
Sbjct: 209 -----RKF------TSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 243
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 50 LGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G +G VY+G+ + VA+K K + F E V++ + H NL+++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 109 NPDFKALVLELMPNGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
++ E M G+L ++L N ++ + L + + A+EYL + +H
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN----FIHR 381
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
+L N L+ EN + +V+DFG+S+L+ G+ I + AP S ++
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYN------- 433
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFT 253
KF S K DV++FGVLL E T
Sbjct: 434 KF------SIKSDVWAFGVLLWEIAT 453
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 33/221 (14%)
Query: 50 LGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLLKI---- 103
LGTG FG V + I D G VAIK + +L R + E ++++ ++H N++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 104 --FSSCSNPDFKALVLELMPNGSLENWL--YSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
+ D L +E G L +L + + L ++ D+ AL YLH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141
Query: 160 SSAPIVHCDLKPSNILLD---ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
I+H DLKP NI+L + ++ ++ D G +K L GE T + T+ Y+AP
Sbjct: 142 ----IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC---TEFVGTLQYLAP-- 192
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ K + D +SFG L E TG +P
Sbjct: 193 ---ELLEQKK--------YTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 33/221 (14%)
Query: 50 LGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLLKI---- 103
LGTG FG V + I D G VAIK + +L R + E ++++ ++H N++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 104 --FSSCSNPDFKALVLELMPNGSLENWL--YSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
+ D L +E G L +L + + L ++ D+ AL YLH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 142
Query: 160 SSAPIVHCDLKPSNILLD---ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
I+H DLKP NI+L + ++ ++ D G +K L GE T + T+ Y+AP
Sbjct: 143 ----IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC---TEFVGTLQYLAP-- 193
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ K + D +SFG L E TG +P
Sbjct: 194 ---ELLEQKK--------YTVTVDYWSFGTLAFECITGFRP 223
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 36/239 (15%)
Query: 43 GFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ C ++G GSFG+V++ L + + VAIK K+ + F+ + E +++R V H N++
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIK--KVLQDKRFK--NRELQIMRIVKHPNVVD 96
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNY--FLDTLERLNIMIDVWLALEY 154
+ +S+ D F LVLE +P + S +Y T+ L I + ++ L
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETV---YRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 155 LHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
L + HS I H D+KP N+LLD + V ++ DFG +K+L GE +V+ + + Y A
Sbjct: 154 LAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS---XICSRYYRA 209
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
P FG+ + D++S G ++ E G+ +F GE + V
Sbjct: 210 P-----------ELIFGATN-YTTNIDIWSTGCVMAELMQGQP----LFPGESGIDQLV 252
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ G+AF+ + E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 137 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 189
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 190 AP-----------ELIFGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQLV 233
Query: 273 N 273
Sbjct: 234 E 234
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ G+AF+ + E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 137 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 189
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 190 AP-----------ELIFGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQLV 233
Query: 273 N 273
Sbjct: 234 E 234
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 36/260 (13%)
Query: 50 LGTGSFGIVYKGILSDG-NNVAIKVF---KLQLGRAFRS-----FDSECEVLRNVHHRNL 100
LG+G+ G V VAI++ K +G A + ++E E+L+ ++H +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
+KI + D+ +VLELM G L + + + + +L + LA++YLH
Sbjct: 203 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYLHENG- 259
Query: 161 SAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP N+LL +E+ + +++DFG SK+L GE S+ +T+ T Y+AP
Sbjct: 260 ---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLC-GTPTYLAP--- 310
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-- 275
++L G+ G A D +S GV+L +G P E T ++SLK+ +
Sbjct: 311 --EVL----VSVGTAGYNRA-VDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKY 362
Query: 276 --LPHALTDVVDANLRVSMK 293
+P +V + L + K
Sbjct: 363 NFIPEVWAEVSEKALDLVKK 382
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 128/279 (45%), Gaps = 39/279 (13%)
Query: 44 FNECNLLGTGSFGIVYKGI-LSDGNN----VAIKVFKLQLGR-AFRSFDSECEVLRNVHH 97
+ +LG+G FG V+KG+ + +G + V IKV + + GR +F++ + ++ H
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 92
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH- 156
+++++ C + LV + +P GSL + + H L LN + + + YL
Sbjct: 93 AHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 151
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
HG +VH +L N+LL +V+DFG++ LL + + + I +MA S
Sbjct: 152 HG-----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS--LKNWVN 273
F G + + DV+S+GV + E T G +P + E+ L+
Sbjct: 207 IHF-------------GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER 253
Query: 274 ESLPHALT-DV---------VDANLRVSMKDVAAKLKKI 302
+ P T DV +D N+R + K++A + ++
Sbjct: 254 LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM 292
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 128/279 (45%), Gaps = 39/279 (13%)
Query: 44 FNECNLLGTGSFGIVYKGI-LSDGNN----VAIKVFKLQLGR-AFRSFDSECEVLRNVHH 97
+ +LG+G FG V+KG+ + +G + V IKV + + GR +F++ + ++ H
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH- 156
+++++ C + LV + +P GSL + + H L LN + + + YL
Sbjct: 75 AHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
HG +VH +L N+LL +V+DFG++ LL + + + I +MA S
Sbjct: 134 HG-----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS--LKNWVN 273
F G + + DV+S+GV + E T G +P + E+ L+
Sbjct: 189 IHF-------------GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER 235
Query: 274 ESLPHALT-DV---------VDANLRVSMKDVAAKLKKI 302
+ P T DV +D N+R + K++A + ++
Sbjct: 236 LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM 274
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 36/260 (13%)
Query: 50 LGTGSFGIVYKGILSDG-NNVAIKVF---KLQLGRAFRS-----FDSECEVLRNVHHRNL 100
LG+G+ G V VAI++ K +G A + ++E E+L+ ++H +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
+KI + D+ +VLELM G L + + + + +L + LA++YLH
Sbjct: 217 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYLHENG- 273
Query: 161 SAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP N+LL +E+ + +++DFG SK+L GE S+ +T+ T Y+AP
Sbjct: 274 ---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLC-GTPTYLAP--- 324
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-- 275
++L G+ G A D +S GV+L +G P E T ++SLK+ +
Sbjct: 325 --EVL----VSVGTAGYNRA-VDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKY 376
Query: 276 --LPHALTDVVDANLRVSMK 293
+P +V + L + K
Sbjct: 377 NFIPEVWAEVSEKALDLVKK 396
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 28/214 (13%)
Query: 50 LGTGSFGIVY------KGILSDGNNVAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLK 102
LG G FG V +G + G VA+K K + G E E+LRN++H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGD-NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 103 IFSSCSNPDFKA--LVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
C+ L++E +P+GSL+ +L + ++ ++L + + ++YL
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL----G 143
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLF 219
S VH DL N+L++ ++ DFG++K + D E + + + + AP +
Sbjct: 144 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM- 202
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+KF I++ DV+SFGV L E T
Sbjct: 203 ------QSKF----YIAS--DVWSFGVTLHELLT 224
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 29/227 (12%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQL------GRAFRSFDSE 88
L Q E + + +G G++G+VYK S G VA+K +L A R E
Sbjct: 14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR----E 69
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
+L+ +HH N++ + + LV E M L+ L + L+ I I +
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENK---TGLQDSQIKIYL 125
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ L + H H I+H DLKP N+L++ + +++DFG+++ G S T + T
Sbjct: 126 YQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--T 182
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+ Y AP D+L GS+ S D++S G + E TGK
Sbjct: 183 LWYRAP-----DVL------MGSKK-YSTSVDIWSIGCIFAEMITGK 217
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 28/214 (13%)
Query: 50 LGTGSFGIVY------KGILSDGNNVAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLK 102
LG G FG V +G + G VA+K K + G E E+LRN++H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGD-NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 103 IFSSCSNPDFKA--LVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
C+ L++E +P+GSL+ +L + ++ ++L + + ++YL
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL----G 131
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVTQTMTMATIGYMAPVSQLF 219
S VH DL N+L++ ++ DFG++K + D E + + + + AP +
Sbjct: 132 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM- 190
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+KF I++ DV+SFGV L E T
Sbjct: 191 ------QSKF----YIAS--DVWSFGVTLHELLT 212
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 30/236 (12%)
Query: 27 ATWRRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIK-VFKLQLGRAFRS 84
++W++ + DI++ E F E LGTG+F +V + G A+K + K L S
Sbjct: 11 SSWKKQAE-DIKKIFE-FKET--LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS 66
Query: 85 FDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI 144
++E VLR + H N++ + +P+ LV++L+ G L + + ++ + + +
Sbjct: 67 IENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK-DASTL 125
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVT 201
+ V A+ YLH IVH DLKP N+L DE +SDFG+SK+ G G+
Sbjct: 126 IRQVLDAVYYLHR----MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---V 178
Query: 202 QTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T GY+AP ++L K S D +S GV+ G P
Sbjct: 179 MSTACGTPGYVAP-----EVLAQKP--------YSKAVDCWSIGVIAYILLCGYPP 221
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGILSDGNN-VAIKVFKLQLGRAFRSFDS------ 87
LD++ + + + + LG G F VYK + N VAIK K++LG + D
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIK--KIKLGHRSEAKDGINRTAL 60
Query: 88 -ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMI 146
E ++L+ + H N++ + + + +LV + M LE + ++ L M+
Sbjct: 61 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYML 119
Query: 147 DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM 206
LEYLH I+H DLKP+N+LLDEN V +++DFG++K G + +
Sbjct: 120 MTLQGLEYLHQHW----ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV- 174
Query: 207 ATIGYMAP 214
T Y AP
Sbjct: 175 -TRWYRAP 181
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 29/227 (12%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQL------GRAFRSFDSE 88
L Q E + + +G G++G+VYK S G VA+K +L A R E
Sbjct: 14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR----E 69
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
+L+ +HH N++ + + LV E M L+ L + L+ I I +
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENK---TGLQDSQIKIYL 125
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ L + H H I+H DLKP N+L++ + +++DFG+++ G S T + T
Sbjct: 126 YQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--T 182
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+ Y AP D+L GS+ S D++S G + E TGK
Sbjct: 183 LWYRAP-----DVL------MGSKK-YSTSVDIWSIGCIFAEMITGK 217
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 20/225 (8%)
Query: 48 NLLGTGSFGIVYKGILS-DGNN---VAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLK 102
++G G FG V G L G VAIK K + R F SE ++ H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ + ++ E M NGSL+++L ++ ++ + ++ + ++YL +
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL----ADM 128
Query: 163 PIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
VH L NIL++ N+V +VSDFG+S+ L ED + + +G P+
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFL---EDDTSDPTYTSALGGKIPIRW----T 181
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
P+ ++ ++ DV+S+G+++ E + G++P +M ++
Sbjct: 182 APEAIQYRK---FTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 223
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 48 NLLGTGSFGIVYKGILSDGNNVAIKVFK----LQLGRAFRSFDSECEVLRNVHHRNLLKI 103
++G G FG VY+ G+ VA+K + + + + E ++ + H N++ +
Sbjct: 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
C LV+E G L L D L +N + + + YLH + P
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHD-EAIVP 128
Query: 164 IVHCDLKPSNILLDE--------NMVARVSDFGISKLLGDGEDSVTQTMTMA-TIGYMAP 214
I+H DLK SNIL+ + N + +++DFG+++ E T M+ A +MAP
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWMAP 183
Query: 215 VSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++++ + S DV+S+GVLL E TG+ P
Sbjct: 184 -----EVIR--------ASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 35/244 (14%)
Query: 25 PVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRS 84
P W + ++ +I R E LG G FG V+ + VA+K K + +
Sbjct: 168 PQKPWEKDAW-EIPR--ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEA 223
Query: 85 FDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERL-N 143
F +E V++ + H L+K+ + + ++ E M GSL ++L S L +L +
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLID 282
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + ++ + +H DL+ +NIL+ ++V +++DFG
Sbjct: 283 FSAQIAEGMAFIEQRN----YIHRDLRAANILVSASLVCKIADFG--------------- 323
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMF 262
+A +G P+ P+ FGS + K DV+SFG+LLME T G+ P M
Sbjct: 324 --LARVGAKFPIK----WTAPEAINFGS---FTIKSDVWSFGILLMEIVTYGRIPYPGMS 374
Query: 263 TGEI 266
E+
Sbjct: 375 NPEV 378
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKG-ILSDGNNVAIKVF-KLQLGRA--FRSFDSECEVL 92
I E F NLLG GSF VY+ + G VAIK+ K + +A + +E ++
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLAL 152
+ H ++L++++ + ++ LVLE+ NG + +L + E + M + +
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125
Query: 153 EYLH-HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
YLH HG I+H DL SN+LL NM +++DFG++ L + T Y
Sbjct: 126 LYLHSHG-----ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNY 178
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
++ P+ A + G+ S DV+S G + G+ P D
Sbjct: 179 IS----------PEIATRSAHGLES---DVWSLGCMFYTLLIGRPPFD 213
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G + L + F D + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALS 127
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 128 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 179
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 180 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 28/221 (12%)
Query: 44 FNECNLLGTGSFGIVY---KGILSDGNNV-AIKVFK---LQLGRAFRSFDSECEVLRNVH 96
F +LG GSFG V+ K SD + A+KV K L++ R+ E ++L V+
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH 156
H ++K+ + L+L+ + G L L F + + + ++ LAL++LH
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDHLH 143
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
S I++ DLKP NILLDE +++DFG+SK D E T+ YMAP
Sbjct: 144 ----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAP-- 195
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+++ + + D +SFGVL+ E TG P
Sbjct: 196 ---EVVNRRGH--------TQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 28/221 (12%)
Query: 44 FNECNLLGTGSFGIVY---KGILSDGNNV-AIKVFK---LQLGRAFRSFDSECEVLRNVH 96
F +LG GSFG V+ K SD + A+KV K L++ R+ E ++L V+
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 85
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH 156
H ++K+ + L+L+ + G L L F + + + ++ LAL++LH
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDHLH 144
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
S I++ DLKP NILLDE +++DFG+SK D E T+ YMAP
Sbjct: 145 ----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAP-- 196
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+++ + + D +SFGVL+ E TG P
Sbjct: 197 ---EVVNRRGH--------TQSADWWSFGVLMFEMLTGTLP 226
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 37/224 (16%)
Query: 48 NLLGTGSFGIVYKGIL--SDGNN--VAIKVFKL--QLGRAFRSFDSECEVLRNVHHRNLL 101
+LG G FG V +G L DG + VA+K KL R F SE +++ H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 102 KIFSSCSNPDFKAL-----VLELMPNGSLENWL-YSH------NYFLDTLERLNIMIDVW 149
++ C + + +L M G L +L YS + L TL L M+D+
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL--LKFMVDIA 157
Query: 150 LALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L +EYL S+ +H DL N +L ++M V+DFG+SK + G+ + +
Sbjct: 158 LGMEYL----SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPV 213
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
++A + L D + ++K DV++FGV + E T
Sbjct: 214 KWIA-IESLAD------------RVYTSKSDVWAFGVTMWEIAT 244
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 28/221 (12%)
Query: 44 FNECNLLGTGSFGIVY---KGILSDGNNV-AIKVFK---LQLGRAFRSFDSECEVLRNVH 96
F +LG GSFG V+ K SD + A+KV K L++ R+ E ++L V+
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH 156
H ++K+ + L+L+ + G L L F + + + ++ LAL++LH
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDHLH 143
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
S I++ DLKP NILLDE +++DFG+SK D E T+ YMAP
Sbjct: 144 ----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAP-- 195
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+++ + + D +SFGVL+ E TG P
Sbjct: 196 ---EVVNRRGH--------TQSADWWSFGVLMFEMLTGTLP 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRA---FRSFDSECEVLRNVHHRNLLKIFS 105
LG GSFG V VA+K QL + + E L+ + H +++K++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
+ P +V+E G L +++ + R + A+EY H IV
Sbjct: 77 VITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCHRHK----IV 130
Query: 166 HCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPK 225
H DLKP N+LLD+N+ +++DFG+S ++ DG T + + Y AP +++
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAP-----EVI--- 179
Query: 226 NAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMF 262
N K + + DV+S G++L G+ P D+ F
Sbjct: 180 NGKLYA----GPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 103/235 (43%), Gaps = 33/235 (14%)
Query: 49 LLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRN--VHHRNLLKIFSS 106
L+G G +G VYKG L D VA+KVF ++F +E + R + H N+ +
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVG 75
Query: 107 CSNPDFKA-----LVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH---- 157
LV+E PNGSL +L H D + + V L YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 158 -GHSSAPIVHCDLKPSNILLDENMVARVSDFGIS------KLLGDGEDSVTQTMTMATIG 210
H I H DL N+L+ + +SDFG+S +L+ GE+ + TI
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGE 265
YMAP ++L+ E + + D+Y+ G++ E F + TD +F GE
Sbjct: 194 YMAP-----EVLEGAVNLRDXESALK-QVDMYALGLIYWEIFM--RCTD-LFPGE 239
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 126
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 127 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 178
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 179 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 121
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 122 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 173
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 174 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 126 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 177
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 178 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTXLCGTLDYLP 174
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 175 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 174
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 175 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 41 TEGFNECNLLGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVL-RNVHHR 98
T+G+ +G GS+ + + I N A+K+ + ++ R E E+L R H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI----IDKSKRDPTEEIEILLRYGQHP 76
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
N++ + + + +V ELM G L + + +F + E ++ + +EYLH
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSER-EASAVLFTITKTVEYLH-- 133
Query: 159 HSSAPIVHCDLKPSNIL-LDEN---MVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
+ +VH DLKPSNIL +DE+ R+ DFG +K L E+ + T T ++AP
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLMTPCY-TANFVAP 189
Query: 215 VSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ + A CD++S GVLL TG P
Sbjct: 190 -----EVLERQG--------YDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 126 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 177
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 178 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 38/229 (16%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS-HNYFLD---------TLERL-NIMIDVW 149
+ +C+ P +V+ E G+L +L S N F+ TLE L V
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 150 LALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
+E+L +S +H DL NILL E V ++ DFG+++ + D V + +
Sbjct: 155 KGMEFL----ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+MAP + +FD + + + DV+SFGVLL E F+ G P
Sbjct: 211 KWMAPET-IFD------------RVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 39/242 (16%)
Query: 43 GFNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLL 101
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 76
Query: 102 KI----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLAL 152
++ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 153 EYLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 136 AYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYY 188
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNW 271
AP FG+ S+ DV+S G +L E G+ +F G+ +
Sbjct: 189 RAP-----------ELIFGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQL 232
Query: 272 VN 273
V
Sbjct: 233 VE 234
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N+++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 85
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 145 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 197
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 198 AP-----------ELIFGATDYTSS-IDVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 241
Query: 273 N 273
Sbjct: 242 E 242
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 127
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 128 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 179
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 180 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 39/242 (16%)
Query: 43 GFNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLL 101
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 76
Query: 102 KI----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLAL 152
++ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 153 EYLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 136 AYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYY 188
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNW 271
AP FG+ S+ DV+S G +L E G+ +F G+ +
Sbjct: 189 RAP-----------ELIFGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQL 232
Query: 272 VN 273
V
Sbjct: 233 VE 234
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 28/221 (12%)
Query: 44 FNECNLLGTGSFGIVY---KGILSD-GNNVAIKVFK---LQLGRAFRSFDSECEVLRNVH 96
F +LG GSFG V+ K D G+ A+KV K L++ R+ E ++L +V+
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVN 88
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH 156
H ++K+ + L+L+ + G L L F + + + ++ L L++LH
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALGLDHLH 147
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
S I++ DLKP NILLDE +++DFG+SK D E T+ YMAP
Sbjct: 148 ----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMAP-- 199
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+++ + S D +S+GVL+ E TG P
Sbjct: 200 ---EVVNRQGH--------SHSADWWSYGVLMFEMLTGSLP 229
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 47/234 (20%)
Query: 50 LGTGSFGIVYKGIL------SDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNVHHRNLLK 102
LG G FG V K + VA+K+ K + R SE VL+ V+H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSH-----NYFLDTL-----------ERLNIMI 146
++ +CS L++E GSL +L Y ER M
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 147 DV----WL---ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS 199
D+ W ++YL + +VH DL NIL+ E ++SDFG+S+ + + +
Sbjct: 151 DLISFAWQISQGMQYL----AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 200 VTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
V ++ + +MA + LFD I + + DV+SFGVLL E T
Sbjct: 207 VKRSQGRIPVKWMA-IESLFD------------HIYTTQSDVWSFGVLLWEIVT 247
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N+++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 96
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 156 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 208
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 209 AP-----------ELIFGATDYTSS-IDVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 252
Query: 273 N 273
Sbjct: 253 E 253
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 40/231 (17%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS-HNYFLD-----------TLERL-NIMID 147
+ +C+ P +V+ E G+L +L S N F+ TLE L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA 207
V +E+L +S +H DL NILL E V ++ DFG+++ + D V +
Sbjct: 157 VAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ +MAP + +FD + + + DV+SFGVLL E F+ G P
Sbjct: 213 PLKWMAPET-IFD------------RVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 89
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 149 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 201
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP +L FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 202 AP--ELI---------FGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQLV 245
Query: 273 N 273
Sbjct: 246 E 246
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 123
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 124 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWS----CHAPSSRRTTLSGTLDYLP 175
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 176 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 47/234 (20%)
Query: 50 LGTGSFGIVYKGIL------SDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNVHHRNLLK 102
LG G FG V K + VA+K+ K + R SE VL+ V+H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSH-----NYFLDTL-----------ERLNIMI 146
++ +CS L++E GSL +L Y ER M
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 147 DV----WL---ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS 199
D+ W ++YL + +VH DL NIL+ E ++SDFG+S+ + + +
Sbjct: 151 DLISFAWQISQGMQYL----AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 200 VTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
V ++ + +MA + LFD I + + DV+SFGVLL E T
Sbjct: 207 VKRSQGRIPVKWMA-IESLFD------------HIYTTQSDVWSFGVLLWEIVT 247
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 39/242 (16%)
Query: 43 GFNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLL 101
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 76
Query: 102 KI----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLAL 152
++ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 153 EYLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 136 AYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYY 188
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNW 271
AP FG+ S+ DV+S G +L E G+ +F G+ +
Sbjct: 189 RAP-----------ELIFGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQL 232
Query: 272 VN 273
V
Sbjct: 233 VE 234
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 39/242 (16%)
Query: 43 GFNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLL 101
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N++
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 77
Query: 102 KI----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLAL 152
++ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 153 EYLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 137 AYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYY 189
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNW 271
AP FG+ S+ DV+S G +L E G+ +F G+ +
Sbjct: 190 RAP-----------ELIFGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQL 233
Query: 272 VN 273
V
Sbjct: 234 VE 235
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 89
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 149 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 201
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 202 AP-----------ELIFGATDYTSS-IDVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 245
Query: 273 N 273
Sbjct: 246 E 246
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 24/222 (10%)
Query: 47 CNLLGTGSFGIVYKGILSD-GNNVAIKVFK-LQLGRAFRSFDSECEVLRNVHHRNLLKIF 104
++LG G+ V++G G+ AIKVF + R E EVL+ ++H+N++K+F
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 105 S--SCSNPDFKALVLELMPNGSLENWLY--SHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
+ + K L++E P GSL L S+ Y L E L ++ DV + +L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-- 131
Query: 161 SAPIVHCDLKPSNILL----DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP-V 215
IVH ++KP NI+ D V +++DFG ++ L D E V+ T Y+ P +
Sbjct: 132 --GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS---LYGTEEYLHPDM 186
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ + K K+G A D++S GV TG P
Sbjct: 187 YERAVLRKDHQKKYG------ATVDLWSIGVTFYHAATGSLP 222
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 119
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 120 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 171
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 172 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q E F+ LG G FG VY + A+KV FK QL +A E E+
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALS 126
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL N +++DFG S S +T T+ Y+
Sbjct: 127 YCH----SKRVIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 178
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E G P
Sbjct: 179 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 111
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 171 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 223
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP +L FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 224 AP--ELI---------FGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQLV 267
Query: 273 N 273
Sbjct: 268 E 268
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 34/229 (14%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS-HNYFLDTLERLNIMIDVWLALEYL---- 155
+ +C+ P +V+ E G+L +L S N F+ E + +L LE+L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 156 ------HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
+S +H DL NILL E V ++ DFG+++ + D V + +
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+MAP + +FD + + + DV+SFGVLL E F+ G P
Sbjct: 217 KWMAPET-IFD------------RVYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 28/229 (12%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF----RS----FDSE 88
+Q E ++ ++G G+FG V ++ + + KV+ ++L F RS F E
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQ--LVR--HKASQKVYAMKLLSKFEMIKRSDSAFFWEE 125
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
+++ + ++++F + + + +V+E MP G L N + NY + +V
Sbjct: 126 RDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEV 183
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
LAL+ +H S ++H D+KP N+LLD++ +++DFG + D V + T
Sbjct: 184 VLALDAIH----SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM-DETGMVHCDTAVGT 238
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
Y++P ++LK + G +G +CD +S GV L E G P
Sbjct: 239 PDYISP-----EVLKSQ----GGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 50 LGTGSFGIVYKGILSDGNNV-AIKVFKLQL---GRAFRSFDSECEVLRNVHHRNLLKIFS 105
+G GSFG V +D + A+K Q R+ E ++++ + H L+ ++
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
S + + +V++L+ G L L + +F + +L + ++ +AL+YL + I+
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FICELVMALDYLQNQR----II 137
Query: 166 HCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA-TIGYMAPVSQLFDILKP 224
H D+KP NILLDE+ ++DF I+ +L TQ TMA T YMAP ++F K
Sbjct: 138 HRDMKPDNILLDEHGHVHITDFNIAAMLP----RETQITTMAGTKPYMAP--EMFSSRKG 191
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
F D +S GV E G++P
Sbjct: 192 AGYSFA--------VDWWSLGVTAYELLRGRRP 216
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTELCGTLDYLP 174
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 175 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 33/223 (14%)
Query: 50 LGTGSFGIVY-KGILSDGNNVAIKVFKLQLGR-AFRSFDSECEVLRNVHHRNLLKIFSSC 107
LG+G+FG V+ S G IK + ++E EVL+++ H N++KIF
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLER---LNIMIDVWLALEYLHHGHSSAPI 164
+ +V+E G L + S L +M + AL Y H H +
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH----V 145
Query: 165 VHCDLKPSNILLDE---NMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
VH DLKP NIL + + ++ DFG+++L E S T T YMAP ++
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAP-----EV 197
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTG 264
K ++ KCD++S GV++ TG P FTG
Sbjct: 198 FKRD---------VTFKCDIWSAGVVMYFLLTGCLP----FTG 227
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 21 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 80
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 139
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 140 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 191
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 192 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N+++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 90
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 150 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 202
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 203 AP-----------ELIFGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQLV 246
Query: 273 N 273
Sbjct: 247 E 247
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N+++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 81
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 141 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYR 193
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 194 AP-----------ELIFGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQLV 237
Query: 273 N 273
Sbjct: 238 E 238
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 23/239 (9%)
Query: 25 PVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKVFKLQLGRAFR 83
PVA +I E F + +G GSFG V+KGI + V AIK+ L+
Sbjct: 6 PVAVQVPGMQNNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEI 65
Query: 84 SF-DSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERL 142
E VL + K + S +++E + GS + L + + D +
Sbjct: 66 EDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF--DEFQIA 123
Query: 143 NIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQ 202
++ ++ L+YLH S +H D+K +N+LL E +++DFG++ L D + + +
Sbjct: 124 TMLKEILKGLDYLH----SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IKR 177
Query: 203 TMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEM 261
+ T +MAP ++++ + +K D++S G+ +E G+ P +M
Sbjct: 178 NTFVGTPFWMAP-----EVIQ--------QSAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N+++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 82
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 142 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 194
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP +L FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 195 AP--ELI---------FGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQLV 238
Query: 273 N 273
Sbjct: 239 E 239
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 39/242 (16%)
Query: 43 GFNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLL 101
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIV 76
Query: 102 KI----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLAL 152
++ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 153 EYLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 136 AYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYY 188
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNW 271
AP FG+ S+ DV+S G +L E G+ +F G+ +
Sbjct: 189 RAP-----------ELIFGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQL 232
Query: 272 VN 273
V
Sbjct: 233 VE 234
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 111
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 171 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 223
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP +L FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 224 AP--ELI---------FGATDYTSS-IDVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 267
Query: 273 N 273
Sbjct: 268 E 268
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 47/234 (20%)
Query: 50 LGTGSFGIVYKGIL------SDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNVHHRNLLK 102
LG G FG V K + VA+K+ K + R SE VL+ V+H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSH-----NYFLDTL-----------ERLNIMI 146
++ +CS L++E GSL +L Y ER M
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 147 DV----WL---ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS 199
D+ W ++YL + +VH DL NIL+ E ++SDFG+S+ + + +
Sbjct: 151 DLISFAWQISQGMQYL----AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 200 VTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
V ++ + +MA + LFD I + + DV+SFGVLL E T
Sbjct: 207 VKRSQGRIPVKWMA-IESLFD------------HIYTTQSDVWSFGVLLWEIVT 247
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N+++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 105
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 165 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 217
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP +L FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 218 AP--ELI---------FGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQLV 261
Query: 273 N 273
Sbjct: 262 E 262
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 48 NLLGTGSFG--IVYKGILSDGNNVAIKVF-KLQLGRAF--RSFDSECEVLRNVHHRNLLK 102
+LG GSFG I+ K ++ G A+KV K Q+ + S E ++L+ + H N++K
Sbjct: 38 RVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
++ + + LV E+ G L + + S F + ++ I+ V + Y+H
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE-VDAARIIRQVLSGITYMHKN---- 151
Query: 163 PIVHCDLKPSNILLD---ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
IVH DLKP N+LL+ ++ R+ DFG+S E S + T Y+AP
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAP----- 203
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L G KCDV+S GV+L +G P
Sbjct: 204 EVL---------HGTYDEKCDVWSTGVILYILLSGCPP 232
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G + L + F D + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALS 127
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S + T+ Y+
Sbjct: 128 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLXGTLDYLP 179
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 180 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 30/226 (13%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNN---VAIKV-FKLQLGRAF--RSFDSECEV 91
Q A E F LG G FG VY + + N+ +A+KV FK QL +A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVY--LAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 92 LRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLA 151
++ H N+L+++ + L+LE P G++ L + F D + ++ A
Sbjct: 62 QSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANA 120
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L Y H S ++H D+KP N+LL +++DFG S S + T+ Y
Sbjct: 121 LSYCH----SKKVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDY 172
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ P ++++ + + K D++S GVL E GK P
Sbjct: 173 LPP-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 115
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 175 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 227
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP +L FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 228 AP--ELI---------FGATDYTSS-IDVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 271
Query: 273 N 273
Sbjct: 272 E 272
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 37 IQRATEGFNE----CNLLGTGSFG--IVYKGILSDGNNVAIKVF-KLQLGRAF--RSFDS 87
+Q +T F++ +LG GSFG I+ K ++ G A+KV K Q+ + S
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 75
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
E ++L+ + H N++K++ + + LV E+ G L + + S F + ++ I+
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE-VDAARIIRQ 134
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLD---ENMVARVSDFGISKLLGDGEDSVTQTM 204
V + Y+H IVH DLKP N+LL+ ++ R+ DFG+S E S
Sbjct: 135 VLSGITYMHKN----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKD 187
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP ++L G KCDV+S GV+L +G P
Sbjct: 188 KIGTAYYIAP-----EVL---------HGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 31/217 (14%)
Query: 49 LLGTGSFG--IVYKGILSDGNNVAIKVF-KLQLGRAF--RSFDSECEVLRNVHHRNLLKI 103
+LG GSFG I+ K ++ G A+KV K Q+ + S E ++L+ + H N++K+
Sbjct: 57 VLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ + + LV E+ G L + + S F + ++ I+ V + Y+H
Sbjct: 116 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE-VDAARIIRQVLSGITYMHKN----K 170
Query: 164 IVHCDLKPSNILLD---ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFD 220
IVH DLKP N+LL+ ++ R+ DFG+S E S + T Y+AP +
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAP-----E 222
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+L G KCDV+S GV+L +G P
Sbjct: 223 VL---------HGTYDEKCDVWSTGVILYILLSGCPP 250
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N+++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 113
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 173 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 225
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP +L FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 226 AP--ELI---------FGATDYTSS-IDVWSAGCVLAELLLGQ----PIFPGDSGVDQLV 269
Query: 273 N 273
Sbjct: 270 E 270
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLP 174
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 175 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLP 174
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 175 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 31/217 (14%)
Query: 49 LLGTGSFG--IVYKGILSDGNNVAIKVF-KLQLGRAF--RSFDSECEVLRNVHHRNLLKI 103
+LG GSFG I+ K ++ G A+KV K Q+ + S E ++L+ + H N++K+
Sbjct: 56 VLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ + + LV E+ G L + + S F + ++ I+ V + Y+H
Sbjct: 115 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE-VDAARIIRQVLSGITYMHKN----K 169
Query: 164 IVHCDLKPSNILLD---ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFD 220
IVH DLKP N+LL+ ++ R+ DFG+S E S + T Y+AP +
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAP-----E 221
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+L G KCDV+S GV+L +G P
Sbjct: 222 VL---------HGTYDEKCDVWSTGVILYILLSGCPP 249
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 38/229 (16%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS-HNYFLD---------TLERL-NIMIDVW 149
+ +C+ P +V+ E G+L +L S N F+ TLE L V
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 150 LALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
+E+L +S +H DL NILL E V ++ DFG+++ + D V + +
Sbjct: 155 KGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+MAP + +FD + + + DV+SFGVLL E F+ G P
Sbjct: 211 KWMAPET-IFD------------RVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 48 NLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS---ECEVLRNVHHRNLLKI 103
++G+G+ +V + VAIK ++ L + S D E + + HH N++
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIK--RINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 73
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYS-------HNYFLDTLERLNIMIDVWLALEYLH 156
++S D LV++L+ GS+ + + + LD I+ +V LEYLH
Sbjct: 74 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 133
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIG---YMA 213
+H D+K NILL E+ +++DFG+S L G D + +G +MA
Sbjct: 134 KNGQ----IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 189
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++ + ++ + K D++SFG+ +E TG P
Sbjct: 190 P--EVMEQVRGYD----------FKADIWSFGITAIELATGAAP 221
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 127
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 128 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLP 179
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 180 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K F E ++ ++H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ ++LELM G L+++L S L L+ L++ D+ +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 159 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 215 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS-HNYFLD-------------TLERL-NIM 145
+ +C+ P +V+ E G+L +L S N F+ TLE L
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
V +E+L +S +H DL NILL E V ++ DFG+++ + D V +
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ +MAP + +FD + + + DV+SFGVLL E F+ G P
Sbjct: 202 RLPLKWMAPET-IFD------------RVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 148
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 149 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 200
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 201 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 39/241 (16%)
Query: 44 FNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
+ + ++G GSFG+VY+ L D G VAIK K+ + F+ + E +++R + H N+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFK--NRELQIMRKLDHCNIVR 156
Query: 103 I----FSSCSNPD--FKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWLALE 153
+ +SS D + LVL+ +P ++ ++ TL + + M ++ +L
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
Y+H S I H D+KP N+LLD + V ++ DFG +K L GE +V+ + + Y
Sbjct: 216 YIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYR 268
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWV 272
AP +L FG+ S+ DV+S G +L E G+ +F G+ + V
Sbjct: 269 AP--ELI---------FGATDYTSS-IDVWSAGCVLAELLLGQP----IFPGDSGVDQLV 312
Query: 273 N 273
Sbjct: 313 E 313
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS-HNYFLD-------------TLERL-NIM 145
+ +C+ P +V+ E G+L +L S N F+ TLE L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
V +E+L +S +H DL NILL E V ++ DFG+++ + D V +
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ +MAP + +FD + + + DV+SFGVLL E F+ G P
Sbjct: 202 RLPLKWMAPET-IFD------------RVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 123
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 124 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLP 175
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 176 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 17/175 (9%)
Query: 48 NLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV-HHRNLLKIFS 105
++LG G+ G IVY+G+ D +VA+K L F D E ++LR H N+++ F
Sbjct: 30 DVLGHGAEGTIVYRGMF-DNRDVAVKRI---LPECFSFADREVQLLRESDEHPNVIRYFC 85
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
+ + F+ + +EL +L+ ++ ++ LE + ++ L +LH S IV
Sbjct: 86 TEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH----SLNIV 140
Query: 166 HCDLKPSNILLD-----ENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAP 214
H DLKP NIL+ + A +SDFG+ K L G S ++ + T G++AP
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K F E ++ ++H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ ++LELM G L+++L S L L+ L++ D+ +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 173 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 229 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 41/232 (17%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS-HNYFLD------------TLERL-NIMI 146
+ +C+ P +V+ E G+L +L S N F+ TLE L
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 147 DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM 206
V +E+L +S +H DL NILL E V ++ DFG+++ + D V +
Sbjct: 156 QVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ +MAP + +FD + + + DV+SFGVLL E F+ G P
Sbjct: 212 LPLKWMAPET-IFD------------RVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 95/225 (42%), Gaps = 28/225 (12%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 127
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S +T T+ Y+
Sbjct: 128 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLP 179
Query: 214 PVSQLFDILKPKNAKFGSEGII-SAKCDVYSFGVLLMETFTGKKP 257
P EG K D++S GVL E GK P
Sbjct: 180 PEX--------------IEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 48 NLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS---ECEVLRNVHHRNLLKI 103
++G+G+ +V + VAIK ++ L + S D E + + HH N++
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIK--RINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 78
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYS-------HNYFLDTLERLNIMIDVWLALEYLH 156
++S D LV++L+ GS+ + + + LD I+ +V LEYLH
Sbjct: 79 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIG---YMA 213
+H D+K NILL E+ +++DFG+S L G D + +G +MA
Sbjct: 139 KNGQ----IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++ + ++ + K D++SFG+ +E TG P
Sbjct: 195 P--EVMEQVRGYD----------FKADIWSFGITAIELATGAAP 226
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 24/221 (10%)
Query: 48 NLLGTGSFGIVYKGILSD-GNNVAIKVFK-LQLGRAFRSFDSECEVLRNVHHRNLLKIFS 105
++LG G+ V++G G+ AIKVF + R E EVL+ ++H+N++K+F+
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 106 --SCSNPDFKALVLELMPNGSLENWLY--SHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
+ K L++E P GSL L S+ Y L E L ++ DV + +L
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-- 132
Query: 162 APIVHCDLKPSNILL----DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP-VS 216
IVH ++KP NI+ D V +++DFG ++ L D E V T Y+ P +
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX---LYGTEEYLHPDMY 187
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ + K K+G A D++S GV TG P
Sbjct: 188 ERAVLRKDHQKKYG------ATVDLWSIGVTFYHAATGSLP 222
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 49 LLGTGSFGIVYKGILSDGN----NVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLLKI 103
+LG G FG VY+G+ ++ NVA+K K + F SE +++N+ H +++K+
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +++EL P G L ++L + L L + + + A+ YL S
Sbjct: 75 IGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE----SIN 129
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
VH D+ NIL+ ++ DFG+S+ + D ED ++T I +M+P S F
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESINF---- 184
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+F + DV+ F V + E + GK+P
Sbjct: 185 ---RRF------TTASDVWMFAVCMWEILSFGKQP 210
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K F E ++ +H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ ++LELM G L+++L S L L+ L++ D+ +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 158 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 214 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 49 LLGTGSFGIVYKGILSDGN----NVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLLKI 103
+LG G FG VY+G+ ++ NVA+K K + F SE +++N+ H +++K+
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +++EL P G L ++L + L L + + + A+ YL S
Sbjct: 91 IGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE----SIN 145
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
VH D+ NIL+ ++ DFG+S+ + D ED ++T I +M+P S F
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESINF---- 200
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+F + DV+ F V + E + GK+P
Sbjct: 201 ---RRF------TTASDVWMFAVCMWEILSFGKQP 226
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS-HNYFLD-------------TLERL-NIM 145
+ +C+ P +V+ E G+L +L S N F+ TLE L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
V +E+L +S +H DL NILL E V ++ DFG+++ + D V +
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ +MAP + +FD + + + DV+SFGVLL E F+ G P
Sbjct: 211 RLPLKWMAPET-IFD------------RVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 49 LLGTGSFGIVYKGILSDGN----NVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLLKI 103
+LG G FG VY+G+ ++ NVA+K K + F SE +++N+ H +++K+
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ +++EL P G L ++L + L L + + + A+ YL S
Sbjct: 79 IGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE----SIN 133
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
VH D+ NIL+ ++ DFG+S+ + D ED ++T I +M+P S F
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESINF---- 188
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+F + DV+ F V + E + GK+P
Sbjct: 189 ---RRF------TTASDVWMFAVCMWEILSFGKQP 214
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S + T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLP 174
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 175 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K F E ++ +H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ ++LELM G L+++L S L L+ L++ D+ +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 150 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 206 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K F E ++ +H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ ++LELM G L+++L S L L+ L++ D+ +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 165 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 221 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 38 QRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLR 93
++ E F +LG GSF +V L+ AIK+ + + E +V+
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
+ H +K++ + + + L NG L ++ F +T R ++ ALE
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 122
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
YLH I+H DLKP NILL+E+M +++DFG +K+L + T Y++
Sbjct: 123 YLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++L K+A D+++ G ++ + G P
Sbjct: 179 P-----ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 209
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K F E ++ +H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ ++LELM G L+++L S L L+ L++ D+ +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 159 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 215 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 38 QRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLR 93
++ E F +LG GSF +V L+ AIK+ + + E +V+
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
+ H +K++ + + + L NG L ++ F +T R ++ ALE
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 121
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
YLH I+H DLKP NILL+E+M +++DFG +K+L + T Y++
Sbjct: 122 YLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++L K+A D+++ G ++ + G P
Sbjct: 178 P-----ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 208
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP--- 203
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A S D+++ G ++ + G P
Sbjct: 204 --ELLTEKSA--------SKSSDLWALGCIIYQLVAGLPP 233
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K F E ++ +H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ ++LELM G L+++L S L L+ L++ D+ +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 175 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 231 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 125/279 (44%), Gaps = 45/279 (16%)
Query: 48 NLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVH-HRNLLKIFS 105
++LG G+ V I L A+K+ + Q G E E+L HRN+L++
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
D LV E M GS+ + ++ +F + LE ++ DV AL++LH + I
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHF-NELEASVVVQDVASALDFLH----NKGIA 133
Query: 166 HCDLKPSNILLDE-NMVA--RVSDFGIS---KLLGDGEDSVTQTM--TMATIGYMAPVSQ 217
H DLKP NIL + N V+ ++ DFG+ KL GD T + + YMAP
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP--- 190
Query: 218 LFDILKPKNAKFGSEG-IISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI---------- 266
++++ F E I +CD++S GV+L +G P F G
Sbjct: 191 --EVVE----AFSEEASIYDKRCDLWSLGVILYILLSGYPP----FVGRCGSDCGWDRGE 240
Query: 267 ---SLKNWVNESLPHALTDVVD---ANLRVSMKDVAAKL 299
+ +N + ES+ + D A++ + KD+ +KL
Sbjct: 241 ACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKL 279
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S + T+ Y+
Sbjct: 126 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLP 177
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 178 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 38 QRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLR 93
++ E F +LG GSF +V L+ AIK+ + + E +V+
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
+ H +K++ + + + L NG L ++ F +T R ++ ALE
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 124
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
YLH I+H DLKP NILL+E+M +++DFG +K+L + T Y++
Sbjct: 125 YLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++L K+A D+++ G ++ + G P
Sbjct: 181 P-----ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 211
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K F E ++ +H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ ++LELM G L+++L S L L+ L++ D+ +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 185 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 241 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S + T+ Y+
Sbjct: 123 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLP 174
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 175 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVF-KLQLGRAFRSFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K ++ + F E ++ +H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ ++LELM G L+++L S L L+ L++ D+ +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 173 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 229 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL ++++FG S S +T T+ Y+
Sbjct: 126 YCH----SKRVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLP 177
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 178 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 34 YLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKVFKLQLGRAFRSF-DSECEV 91
Y E F + +G GSFG V+KGI + V AIK+ L+ E V
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV 78
Query: 92 LRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLA 151
L + K + S +++E + GS + L LD + I+ ++
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKG 136
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+YLH S +H D+K +N+LL E+ +++DFG++ L D + + + + T +
Sbjct: 137 LDYLH----SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFW 190
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEM 261
MAP +++K + +K D++S G+ +E G+ P E+
Sbjct: 191 MAP-----EVIK--------QSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 23/222 (10%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNV-AIKVFKLQLGRAFRSF-DSECEVLRNVHHRN 99
E F + +G GSFG V+KGI + V AIK+ L+ E VL
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
+ K + S +++E + GS + L LD + I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 121
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
S +H D+K +N+LL E+ +++DFG++ L D + + + + T +MAP
Sbjct: 122 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAP----- 173
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEM 261
+++K + +K D++S G+ +E G+ P E+
Sbjct: 174 EVIK--------QSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 38 QRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLR 93
++ E F +LG GSF +V L+ AIK+ + + E +V+
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
+ H +K++ + + + L NG L ++ F +T R ++ ALE
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 123
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
YLH I+H DLKP NILL+E+M +++DFG +K+L + T Y++
Sbjct: 124 YLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++L K+A D+++ G ++ + G P
Sbjct: 180 P-----ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S + T+ Y+
Sbjct: 126 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLP 177
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 178 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 23/222 (10%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNV-AIKVFKLQLGRAFRSF-DSECEVLRNVHHRN 99
E F + +G GSFG V+KGI + V AIK+ L+ E VL
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
+ K + S +++E + GS + L LD + I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 121
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
S +H D+K +N+LL E+ +++DFG++ L D + + + + T +MAP
Sbjct: 122 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAP----- 173
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEM 261
+++K + +K D++S G+ +E G+ P E+
Sbjct: 174 EVIK--------QSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS-HNYFLD-------------TLERL-NIM 145
+ +C+ P +V+ E G+L +L S N F+ TLE L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
V +E+L +S +H DL NILL E V ++ DFG+++ + D V +
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ +MAP + +FD + + + DV+SFGVLL E F+ G P
Sbjct: 211 RLPLKWMAPET-IFD------------RVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 124
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL ++++FG S S +T T+ Y+
Sbjct: 125 YCH----SKRVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLP 176
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 177 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K F E ++ +H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ ++LELM G L+++L S L L+ L++ D+ +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 159 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 215 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS-HNYFLD-------------TLERL-NIM 145
+ +C+ P +V+ E G+L +L S N F+ TLE L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
V +E+L +S +H DL NILL E V ++ DFG+++ + D V +
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ +MAP + +FD + + + DV+SFGVLL E F+ G P
Sbjct: 202 RLPLKWMAPET-IFD------------RVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 23/222 (10%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNV-AIKVFKLQLGRAFRSF-DSECEVLRNVHHRN 99
E F + +G GSFG V+KGI + V AIK+ L+ E VL
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
+ K + S +++E + GS + L LD + I+ ++ L+YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 136
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
S +H D+K +N+LL E+ +++DFG++ L D + + + + T +MAP
Sbjct: 137 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAP----- 188
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEM 261
+++K + +K D++S G+ +E G+ P E+
Sbjct: 189 EVIK--------QSAYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 24/223 (10%)
Query: 50 LGTGSFGIVYKGIL---SDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNVHHRNLLKIFS 105
LG G+FG V +G+ +VAIKV K +A E +++ + + ++++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
C LV+E+ G L +L + ++ V + ++YL + V
Sbjct: 78 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN----FV 132
Query: 166 HCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIGYMAPVSQLFDILKP 224
H DL N+LL A++SDFG+SK LG + T ++ + + AP F
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF----- 187
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF S++ DV+S+GV + E + G+KP +M E+
Sbjct: 188 --RKF------SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 222
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP--- 203
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A S D+++ G ++ + G P
Sbjct: 204 --ELLTEKSAXKSS--------DLWALGCIIYQLVAGLPP 233
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 30/223 (13%)
Query: 41 TEGFNECNLLGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVL-RNVHHR 98
T+G+ +G GS+ + + I N A+K+ + ++ R E E+L R H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKI----IDKSKRDPTEEIEILLRYGQHP 76
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
N++ + + + +V EL G L + + +F + E ++ + +EYLH
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSER-EASAVLFTITKTVEYLH-- 133
Query: 159 HSSAPIVHCDLKPSNIL-LDEN---MVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
+ +VH DLKPSNIL +DE+ R+ DFG +K L E+ + T T ++AP
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLXTPCY-TANFVAP 189
Query: 215 VSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ + A CD++S GVLL TG P
Sbjct: 190 -----EVLERQG--------YDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS-HNYFLD-------------TLERL-NIM 145
+ +C+ P +V+ E G+L +L S N F+ TLE L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
V +E+L +S +H DL NILL E V ++ DFG+++ + D V +
Sbjct: 146 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ +MAP + +FD + + + DV+SFGVLL E F+ G P
Sbjct: 202 RLPLKWMAPET-IFD------------RVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 124
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S + T+ Y+
Sbjct: 125 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLP 176
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 177 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 46/235 (19%)
Query: 50 LGTGSFGIVYKG---------------ILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRN 94
LG+G+FG V KG + ++ N+ A+K L +E V++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL----------AEANVMQQ 68
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
+ + ++++ C + LV+E+ G L +L + + D + ++ V + ++Y
Sbjct: 69 LDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKY 126
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMA 213
L + VH DL N+LL A++SDFG+SK L E+ QT + + A
Sbjct: 127 LEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYA 182
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
P + + K S+K DV+SFGVL+ E F+ G+KP M E++
Sbjct: 183 P--ECINYYK-----------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K F E ++ +H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ +++ELM G L+++L S L L+ L++ D+ +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 158 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 214 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS-HNYFLD-------------TLERL-NIM 145
+ +C+ P +V+ E G+L +L S N F+ TLE L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
V +E+L +S +H DL NILL E V ++ DFG+++ + D V +
Sbjct: 155 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ +MAP + +FD + + + DV+SFGVLL E F+ G P
Sbjct: 211 RLPLKWMAPET-IFD------------RVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 57/251 (22%)
Query: 32 TSYLDIQRATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDSECE 90
T Y +R F E L+G+G FG V+K DG I+ K +A R E +
Sbjct: 2 TKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVK 57
Query: 91 VLRNVHHRNLL------------------KIFSSCSNPDFKA-----------LVLELMP 121
L + H N++ + SS +P+ + +E
Sbjct: 58 ALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCD 117
Query: 122 NGSLENWLYSHN-YFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENM 180
G+LE W+ LD + L + + ++Y+H S ++H DLKPSNI L +
Sbjct: 118 KGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH----SKKLIHRDLKPSNIFLVDTK 173
Query: 181 VARVSDFG-ISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKC 239
++ DFG ++ L DG+ +T + T+ YM+P Q+ + +G E
Sbjct: 174 QVKIGDFGLVTSLKNDGK----RTRSKGTLRYMSP-EQI------SSQDYGKE------V 216
Query: 240 DVYSFGVLLME 250
D+Y+ G++L E
Sbjct: 217 DLYALGLILAE 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 131
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 132 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP--- 185
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 186 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 215
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K F E ++ +H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ ++LELM G L+++L S L L+ L++ D+ +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 176 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 232 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 123
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S + T+ Y+
Sbjct: 124 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDTLCGTLDYLP 175
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 176 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 28/230 (12%)
Query: 36 DIQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF----RS----FDS 87
D++ E + ++G G+FG V ++ + KV+ ++L F RS F
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEV--QLVR--HKSTRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
E +++ + ++++F + + + +V+E MP G L N + NY + +
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAE 181
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA 207
V LAL+ +H S +H D+KP N+LLD++ +++DFG + + E V +
Sbjct: 182 VVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVG 236
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
T Y++P ++LK + G +G +CD +S GV L E G P
Sbjct: 237 TPDYISP-----EVLKSQ----GGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K F E ++ +H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ +++ELM G L+++L S L L+ L++ D+ +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 173 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 229 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 30/222 (13%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNN---VAIKV-FKLQLGRA--FRSFDSECEVLRNVHH 97
F+ LG G FG VY + + N +A+KV FK QL + E E+ ++ H
Sbjct: 16 FDIVRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L++++ + L+LE P G L L H F D M ++ AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHYCH- 131
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
++H D+KP N+L+ +++DFG S S+ + T+ Y+ P
Sbjct: 132 ---ERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPP--- 181
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
++++ K K D++ GVL E G P D
Sbjct: 182 --EMIEGKTH--------DEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS-HNYFLD-------------TLERL-NIM 145
+ +C+ P +V+ E G+L +L S N F+ TLE L
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
V +E+L +S +H DL NILL E V ++ DFG+++ + D V +
Sbjct: 192 FQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ +MAP + +FD + + + DV+SFGVLL E F+ G P
Sbjct: 248 RLPLKWMAPET-IFD------------RVYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 50 LGTGSFGIVYKGILSDGNN------VAIKVFKLQLGRAFR-SFDSECEVLRNVHHRNLLK 102
LG G+FG VY+G +S N VA+K F E ++ +H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLY------SHNYFLDTLERLNIMIDVWLALEYLH 156
+ ++LELM G L+++L S L L+ L++ D+ +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
H +H D+ N LL VA++ DFG+++ + M + +M
Sbjct: 199 ENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
P + + EGI ++K D +SFGVLL E F+
Sbjct: 255 PEAFM-------------EGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 46/235 (19%)
Query: 50 LGTGSFGIVYKG---------------ILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRN 94
LG+G+FG V KG + ++ N+ A+K L +E V++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL----------AEANVMQQ 427
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
+ + ++++ C + LV+E+ G L +L + + D + ++ V + ++Y
Sbjct: 428 LDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKY 485
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMA 213
L + VH DL N+LL A++SDFG+SK L E+ QT + + A
Sbjct: 486 LEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 541
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
P + + K S+K DV+SFGVL+ E F+ G+KP M E++
Sbjct: 542 P--ECINYYK-----------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 583
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP--- 201
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 202 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 231
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 28/230 (12%)
Query: 36 DIQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF----RS----FDS 87
D++ E + ++G G+FG V + KV+ ++L F RS F
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLV----RHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
E +++ + ++++F + + + +V+E MP G L N + NY + +
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAE 181
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA 207
V LAL+ +H S +H D+KP N+LLD++ +++DFG + + E V +
Sbjct: 182 VVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVG 236
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
T Y++P ++LK + G +G +CD +S GV L E G P
Sbjct: 237 TPDYISP-----EVLKSQ----GGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 46/235 (19%)
Query: 50 LGTGSFGIVYKG---------------ILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRN 94
LG+G+FG V KG + ++ N+ A+K L +E V++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL----------AEANVMQQ 74
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
+ + ++++ C + LV+E+ G L +L + + D + ++ V + ++Y
Sbjct: 75 LDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKY 132
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMA 213
L + VH DL N+LL A++SDFG+SK L E+ QT + + A
Sbjct: 133 LEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 188
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
P + + K S+K DV+SFGVL+ E F+ G+KP M E++
Sbjct: 189 P--ECINYYK-----------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP--- 203
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 204 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 46/235 (19%)
Query: 50 LGTGSFGIVYKG---------------ILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRN 94
LG+G+FG V KG + ++ N+ A+K L +E V++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL----------AEANVMQQ 84
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
+ + ++++ C + LV+E+ G L +L + + D + ++ V + ++Y
Sbjct: 85 LDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKY 142
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMA 213
L + VH DL N+LL A++SDFG+SK L E+ QT + + A
Sbjct: 143 LEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 198
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
P + + K S+K DV+SFGVL+ E F+ G+KP M E++
Sbjct: 199 P--ECINYYK-----------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 46/235 (19%)
Query: 50 LGTGSFGIVYKG---------------ILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRN 94
LG+G+FG V KG + ++ N+ A+K L +E V++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL----------AEANVMQQ 84
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
+ + ++++ C + LV+E+ G L +L + + D + ++ V + ++Y
Sbjct: 85 LDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKY 142
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMA 213
L + VH DL N+LL A++SDFG+SK L E+ QT + + A
Sbjct: 143 LEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 198
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
P + + K S+K DV+SFGVL+ E F+ G+KP M E++
Sbjct: 199 P--ECINYYK-----------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 46/235 (19%)
Query: 50 LGTGSFGIVYKG---------------ILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRN 94
LG+G+FG V KG + ++ N+ A+K L +E V++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL----------AEANVMQQ 68
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
+ + ++++ C + LV+E+ G L +L + + D + ++ V + ++Y
Sbjct: 69 LDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKY 126
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMA 213
L + VH DL N+LL A++SDFG+SK L E+ QT + + A
Sbjct: 127 LEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 182
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
P + + K S+K DV+SFGVL+ E F+ G+KP M E++
Sbjct: 183 P--ECINYYK-----------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 146
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 147 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP--- 200
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 201 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 230
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q E F+ LG G FG VY + A+KV FK QL +A E E+
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALS 126
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL N +++DFG S S + T+ Y+
Sbjct: 127 YCH----SKRVIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRDTLCGTLDYLP 178
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E G P
Sbjct: 179 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 46/235 (19%)
Query: 50 LGTGSFGIVYKG---------------ILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRN 94
LG+G+FG V KG + ++ N+ A+K L +E V++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL----------AEANVMQQ 82
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
+ + ++++ C + LV+E+ G L +L + + D + ++ V + ++Y
Sbjct: 83 LDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKY 140
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMA 213
L + VH DL N+LL A++SDFG+SK L E+ QT + + A
Sbjct: 141 LEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 196
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
P + + K S+K DV+SFGVL+ E F+ G+KP M E++
Sbjct: 197 P--ECINYYK-----------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 238
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 46/227 (20%)
Query: 44 FNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
F E L+G+G FG V+K DG IK K +A R E + L + H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 103 IFSSC-----SNPDFKA------------LVLELMPNGSLENWLYSHN-YFLDTLERLNI 144
++ C +P+ + + +E G+LE W+ LD + L +
Sbjct: 69 -YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFG-ISKLLGDGEDSVTQT 203
+ ++Y+H S +++ DLKPSNI L + ++ DFG ++ L DG+ +
Sbjct: 128 FEQITKGVDYIH----SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK----RX 179
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
+ T+ YM+P Q+ + +G E D+Y+ G++L E
Sbjct: 180 RSKGTLRYMSP-EQI------SSQDYGKE------VDLYALGLILAE 213
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP--- 201
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 202 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP--- 201
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 202 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP--- 203
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 204 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 48 NLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR-----AFRSFDSECEVLRNVHHRNLLK 102
++G G FG+VY G D I+ L R +F E ++R ++H N+L
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 103 IFSSCSNPD-FKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
+ P+ ++L M +G L ++ S + ++ + V +EYL +
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL----AE 142
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
VH DL N +LDE+ +V+DFG+++ + D E Q A + PV + +
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL----PV-KWTAL 197
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ +F + K DV+SFGVLL E T P
Sbjct: 198 ESLQTYRF------TTKSDVWSFGVLLWELLTRGAP 227
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 46/235 (19%)
Query: 50 LGTGSFGIVYKG---------------ILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRN 94
LG+G+FG V KG + ++ N+ A+K L +E V++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL----------AEANVMQQ 426
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
+ + ++++ C + LV+E+ G L +L + + D + ++ V + ++Y
Sbjct: 427 LDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKY 484
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMA 213
L + VH DL N+LL A++SDFG+SK L E+ QT + + A
Sbjct: 485 LEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 540
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
P + + K S+K DV+SFGVL+ E F+ G+KP M E++
Sbjct: 541 P--ECINYYK-----------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 582
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 152
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 153 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP--- 206
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 207 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 236
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 46/235 (19%)
Query: 50 LGTGSFGIVYKG---------------ILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRN 94
LG+G+FG V KG + ++ N+ A+K L +E V++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL----------AEANVMQQ 62
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
+ + ++++ C + LV+E+ G L +L + + D + ++ V + ++Y
Sbjct: 63 LDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKY 120
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMA 213
L + VH DL N+LL A++SDFG+SK L E+ QT + + A
Sbjct: 121 LEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 176
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
P + + K S+K DV+SFGVL+ E F+ G+KP M E++
Sbjct: 177 P--ECINYYK-----------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 218
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP--- 203
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 204 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 28/230 (12%)
Query: 36 DIQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF----RS----FDS 87
D++ E + ++G G+FG V ++ + KV+ ++L F RS F
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEV--QLVR--HKSTRKVYAMKLLSKFEMIKRSDSAFFWE 118
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
E +++ + ++++F + + + +V+E MP G L N + NY + +
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAE 176
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA 207
V LAL+ +H S +H D+KP N+LLD++ +++DFG + + E V +
Sbjct: 177 VVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVG 231
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
T Y++P ++LK + G +G +CD +S GV L E G P
Sbjct: 232 TPDYISP-----EVLKSQ----GGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 49 LLGTGSFG--IVYKGILSDGNNVAIKVF-KLQLGRAF--RSFDSECEVLRNVHHRNLLKI 103
+LG GSFG I+ K ++ G A+KV K Q+ + S E ++L+ + H N+ K+
Sbjct: 33 VLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ + + LV E+ G L + + S F + ++ I+ V + Y H
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE-VDAARIIRQVLSGITYXHKN----K 146
Query: 164 IVHCDLKPSNILLD---ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFD 220
IVH DLKP N+LL+ ++ R+ DFG+S E S + T Y+AP +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIGTAYYIAP-----E 198
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+L G KCDV+S GV+L +G P
Sbjct: 199 VL---------HGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 46/235 (19%)
Query: 50 LGTGSFGIVYKG---------------ILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRN 94
LG+G+FG V KG + ++ N+ A+K L +E V++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL----------AEANVMQQ 64
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
+ + ++++ C + LV+E+ G L +L + + D + ++ V + ++Y
Sbjct: 65 LDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKY 122
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSV-TQTMTMATIGYMA 213
L + VH DL N+LL A++SDFG+SK L E+ QT + + A
Sbjct: 123 LEESN----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 178
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEIS 267
P + + K S+K DV+SFGVL+ E F+ G+KP M E++
Sbjct: 179 P--ECINYYK-----------FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 220
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP--- 203
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 204 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 150
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 151 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP--- 204
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 205 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 234
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 29/234 (12%)
Query: 32 TSYLDIQRATEGFNECNLLGTGSFGIVY--KGILSDGNNVAIKVF-KLQLG-RAFRSFDS 87
TS D Q + +G G+F V + +L+ G VA+K+ K QL + +
Sbjct: 5 TSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFR 63
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
E +++ ++H N++K+F LV+E G + ++L +H + R
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-Q 122
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISK--LLGDGEDSVTQTMT 205
+ A++Y H + IVH DLK N+LLD +M +++DFG S +G+ D+
Sbjct: 123 IVSAVQYCHQKY----IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC---- 174
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
+ Y AP +LF + K+ + DV+S GV+L +G P D
Sbjct: 175 -GSPPYAAP--ELF-----QGKKYD-----GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 38/246 (15%)
Query: 31 RTSYLDIQRATEGFNEC----NLLGTGSFGIVYKGILSDG-NNVAIKVFKLQLGRAFRSF 85
R + L +T GF E +LG G +V + I A+K+ + G +F +
Sbjct: 2 RDAALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE 61
Query: 86 D---------SECEVLRNVH-HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYF 135
+ E ++LR V H N++++ + F LV +LM G L ++L +
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVT 120
Query: 136 LDTLERLNIM---IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKL 192
L E IM ++V AL L+ IVH DLKP NILLD++M +++DFG S
Sbjct: 121 LSEKETRKIMRALLEVICALHKLN-------IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173
Query: 193 LGDGEDSVTQTMTMATIGYMAPVSQLFDI-LKPKNAKFGSEGIISAKCDVYSFGVLLMET 251
L GE + T Y+AP ++ + + + +G E D++S GV++
Sbjct: 174 LDPGEKLRS---VCGTPSYLAP--EIIECSMNDNHPGYGKE------VDMWSTGVIMYTL 222
Query: 252 FTGKKP 257
G P
Sbjct: 223 LAGSPP 228
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVYK----GILSDGNN----VAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G+FG V G+ D N VA+K+ K + SE E+++ + H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLN------I 144
++ + +C+ +++E G+L +L YS+N + E+L+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V +EYL +S +H DL N+L+ E+ V +++DFG+++ + + T
Sbjct: 149 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD I + + DV+SFGVLL E FT
Sbjct: 205 GRLPVKWMAPEA-LFD------------RIYTHQSDVWSFGVLLWEIFT 240
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRAF--RSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S + T+ Y+
Sbjct: 126 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLP 177
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 178 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVYK----GILSDGNN----VAIKVFKLQ-LGRAFRSFDSECEVLRNV-HHRN 99
LG G+FG V G+ D N VA+K+ K + SE E+++ + H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLN------I 144
++ + +C+ +++E G+L +L YS+N + E+L+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V +EYL +S +H DL N+L+ E+ V +++DFG+++ + + T
Sbjct: 145 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD I + + DV+SFGVLL E FT
Sbjct: 201 GRLPVKWMAPEA-LFD------------RIYTHQSDVWSFGVLLWEIFT 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVYK----GILSDGNN----VAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G+FG V G+ D N VA+K+ K + SE E+++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLN------I 144
++ + +C+ +++E G+L +L YS+N + E+L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V +EYL +S +H DL N+L+ E+ V +++DFG+++ + + T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD I + + DV+SFGVLL E FT
Sbjct: 212 GRLPVKWMAPEA-LFD------------RIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVYK----GILSDGNN----VAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G+FG V G+ D N VA+K+ K + SE E+++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLN------I 144
++ + +C+ +++E G+L +L YS+N + E+L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V +EYL +S +H DL N+L+ E+ V +++DFG+++ + + T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD I + + DV+SFGVLL E FT
Sbjct: 212 GRLPVKWMAPEA-LFD------------RIYTHQSDVWSFGVLLWEIFT 247
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 30/222 (13%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNN---VAIKV-FKLQLGRA--FRSFDSECEVLRNVHH 97
F+ LG G FG VY + + N +A+KV FK QL + E E+ ++ H
Sbjct: 16 FDIGRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N+L++++ + L+LE P G L L H F D M ++ AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHYCH- 131
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
++H D+KP N+L+ +++DFG S S+ + T+ Y+ P
Sbjct: 132 ---ERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPP--- 181
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
++++ K K D++ GVL E G P D
Sbjct: 182 --EMIEGKTH--------DEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVYK----GILSDGNN----VAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G+FG V G+ D N VA+K+ K + SE E+++ + H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLN------I 144
++ + +C+ +++E G+L +L YS+N + E+L+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V +EYL +S +H DL N+L+ E+ V +++DFG+++ + + T
Sbjct: 148 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD I + + DV+SFGVLL E FT
Sbjct: 204 GRLPVKWMAPEA-LFD------------RIYTHQSDVWSFGVLLWEIFT 239
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 20/220 (9%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFD-SECEVLRNVHH 97
++ F + LG G++ VYKG+ + G VA+K KL S E +++ + H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNY--FLDTLERLNIMIDVWLALEYL 155
N+++++ + LV E M N L+ ++ S LE + W L+ L
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
H + I+H DLKP N+L+++ ++ DFG+++ G ++ + + T+ Y AP
Sbjct: 122 AFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS--EVVTLWYRAP- 177
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
D+L GS S D++S G +L E TGK
Sbjct: 178 ----DVL------MGSR-TYSTSIDIWSCGCILAEMITGK 206
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 30/216 (13%)
Query: 50 LGTGSFGIVYKGILSDGNN---VAIKV-FKLQLGRA--FRSFDSECEVLRNVHHRNLLKI 103
LG G FG VY + + N +A+KV FK QL + E E+ ++ H N+L++
Sbjct: 23 LGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
++ + L+LE P G L L H F D M ++ AL Y H
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADALHYCH----ERK 135
Query: 164 IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
++H D+KP N+L+ +++DFG S S+ + T+ Y+ P ++++
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPP-----EMIE 186
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
K K D++ GVL E G P D
Sbjct: 187 GKTH--------DEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 146
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 147 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP--- 200
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 201 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 150
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 151 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP--- 204
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 205 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 234
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 110/246 (44%), Gaps = 38/246 (15%)
Query: 31 RTSYLDIQRATEGFNEC----NLLGTGSFGIVYKGILSDG-NNVAIKVFKLQLGRAFRSF 85
R + L +T GF E +LG G +V + I A+K+ + G +F +
Sbjct: 2 RDAALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE 61
Query: 86 D---------SECEVLRNVH-HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYF 135
+ E ++LR V H N++++ + F LV +LM G L ++L +
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVT 120
Query: 136 LDTLERLNIM---IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKL 192
L E IM ++V AL L+ IVH DLKP NILLD++M +++DFG S
Sbjct: 121 LSEKETRKIMRALLEVICALHKLN-------IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173
Query: 193 LGDGEDSVTQTMTMATIGYMAPVSQLFDI-LKPKNAKFGSEGIISAKCDVYSFGVLLMET 251
L GE T Y+AP ++ + + + +G E D++S GV++
Sbjct: 174 LDPGE---KLREVCGTPSYLAP--EIIECSMNDNHPGYGKE------VDMWSTGVIMYTL 222
Query: 252 FTGKKP 257
G P
Sbjct: 223 LAGSPP 228
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 50 LGTGSFGIVY--KGILSDGNNVAIKVF-KLQL-GRAFRSFDSECEVLRNVHHRNLLKIFS 105
+G G+F V + IL+ G VA+K+ K QL + + E +++ ++H N++K+F
Sbjct: 15 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
LV+E G + ++L +H + + R + A++Y H IV
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF----IV 128
Query: 166 HCDLKPSNILLDENMVARVSDFGISK--LLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
H DLK N+LLD +M +++DFG S G+ D+ + Y AP +LF
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAP--ELF---- 177
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
+ K+ + DV+S GV+L +G P D
Sbjct: 178 -QGKKYD-----GPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNV----AIKVFK----LQLGRAFRSFDSECEVLR 93
E F +LGTG++G V+ G++ A+KV K +Q + +E +VL
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 94 NVHHRNLLKIFSSCSNPDFK-ALVLELMPNGSLENWLYSHNYFLDTLERLNIMI-DVWLA 151
++ L + K L+L+ + G L L F T + I + ++ LA
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF--TEHEVQIYVGEIVLA 171
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
LE+LH I++ D+K NILLD N ++DFG+SK E TI Y
Sbjct: 172 LEHLH----KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC-GTIEY 226
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
MAP DI++ G + D +S GVL+ E TG P
Sbjct: 227 MAP-----DIVR------GGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 22/265 (8%)
Query: 1 MIVIIVCIVLRKRSAKIIAPIDLLPVATWRR--TSYLDIQR-ATEGFNECNLLGTGSFGI 57
++ I++C+ ++ + ++L W + TS + R E F ++G G+FG
Sbjct: 30 LLDILICLYDECNNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGE 89
Query: 58 VYKGILSDGNNV-AIKVFKL--QLGRAFRS-FDSECEVLRNVHHRNLLKIFSSCSNPDFK 113
V L + + V A+K+ L RA + F E +VL N + + + + + +
Sbjct: 90 VAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149
Query: 114 ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSN 173
LV++ G L L L + ++ +A++ +H H VH D+KP N
Sbjct: 150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH----YVHRDIKPDN 205
Query: 174 ILLDENMVARVSDFGIS-KLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSE 232
IL+D N R++DFG KL+ DG +V ++ + T Y++P +IL+ A G +
Sbjct: 206 ILMDMNGHIRLADFGSCLKLMEDG--TVQSSVAVGTPDYISP-----EILQ---AMEGGK 255
Query: 233 GIISAKCDVYSFGVLLMETFTGKKP 257
G +CD +S GV + E G+ P
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 36 DIQRATEGFNECNLLGTGSFGIVYKGILSDGNN----VAIKVFKLQLGRAFRS-FDSECE 90
+IQR C +G G FG V++GI N VAIK K + R F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 91 VLRNVHHRNLLKIFSSCS-NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW 149
+R H +++K+ + NP + +++EL G L ++L Y LD + +
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 150 LALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA-- 207
AL YL S VH D+ N+L+ N ++ DFG+S+ + EDS +
Sbjct: 122 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 174
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
I +MAP S F +F S DV+ FGV + E G KP
Sbjct: 175 PIKWMAPESINF-------RRFTSAS------DVWMFGVCMWEILMHGVKP 212
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 36 DIQRATEGFNECNLLGTGSFGIVYKGILSDGNN----VAIKVFKLQLGRAFRS-FDSECE 90
+IQR C +G G FG V++GI N VAIK K + R F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 91 VLRNVHHRNLLKIFSSCS-NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW 149
+R H +++K+ + NP + +++EL G L ++L Y LD + +
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 150 LALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA-- 207
AL YL S VH D+ N+L+ N ++ DFG+S+ + EDS +
Sbjct: 122 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 174
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
I +MAP S F +F S DV+ FGV + E G KP
Sbjct: 175 PIKWMAPESINF-------RRFTSAS------DVWMFGVCMWEILMHGVKP 212
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 36 DIQRATEGFNECNLLGTGSFGIVYKGILSDGNN----VAIKVFKLQLGRAFRS-FDSECE 90
+IQR C +G G FG V++GI N VAIK K + R F E
Sbjct: 11 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 91 VLRNVHHRNLLKIFSSCS-NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW 149
+R H +++K+ + NP + +++EL G L ++L Y LD + +
Sbjct: 69 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 126
Query: 150 LALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA-- 207
AL YL S VH D+ N+L+ N ++ DFG+S+ + EDS +
Sbjct: 127 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 179
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
I +MAP S F +F S DV+ FGV + E G KP
Sbjct: 180 PIKWMAPESINF-------RRFTSAS------DVWMFGVCMWEILMHGVKP 217
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 36 DIQRATEGFNECNLLGTGSFGIVYKGILSDGNN----VAIKVFKLQLGRAFRS-FDSECE 90
+IQR C +G G FG V++GI N VAIK K + R F E
Sbjct: 8 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 91 VLRNVHHRNLLKIFSSCS-NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW 149
+R H +++K+ + NP + +++EL G L ++L Y LD + +
Sbjct: 66 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 123
Query: 150 LALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA-- 207
AL YL S VH D+ N+L+ N ++ DFG+S+ + EDS +
Sbjct: 124 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 176
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
I +MAP S F +F S DV+ FGV + E G KP
Sbjct: 177 PIKWMAPESINF-------RRFTSAS------DVWMFGVCMWEILMHGVKP 214
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 39/236 (16%)
Query: 39 RATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHH 97
R F E +LG G+FG V K + D AIK + + SE +L +++H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 98 -------------RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI 144
RN +K ++ + +E NG+L + ++S N E +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGED------ 198
+ AL Y+H S I+H DLKP NI +DE+ ++ DFG++K + D
Sbjct: 122 FRQILEALSYIH----SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 199 ----SVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
+ +T A M +++ D G + K D+YS G++ E
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLD----------GTGHYNEKIDMYSLGIIFFE 223
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 36 DIQRATEGFNECNLLGTGSFGIVYKGILSDGNN----VAIKVFKLQLGRAFRS-FDSECE 90
+IQR C +G G FG V++GI N VAIK K + R F E
Sbjct: 3 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 91 VLRNVHHRNLLKIFSSCS-NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW 149
+R H +++K+ + NP + +++EL G L ++L Y LD + +
Sbjct: 61 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 118
Query: 150 LALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA-- 207
AL YL S VH D+ N+L+ N ++ DFG+S+ + EDS +
Sbjct: 119 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 171
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
I +MAP S F +F S DV+ FGV + E G KP
Sbjct: 172 PIKWMAPESINF-------RRFTSAS------DVWMFGVCMWEILMHGVKP 209
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 36 DIQRATEGFNECNLLGTGSFGIVYKGILSDGNN----VAIKVFKLQLGRAFRS-FDSECE 90
+IQR C +G G FG V++GI N VAIK K + R F E
Sbjct: 9 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 91 VLRNVHHRNLLKIFSSCS-NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW 149
+R H +++K+ + NP + +++EL G L ++L Y LD + +
Sbjct: 67 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 124
Query: 150 LALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA-- 207
AL YL S VH D+ N+L+ N ++ DFG+S+ + EDS +
Sbjct: 125 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 177
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
I +MAP S F +F S DV+ FGV + E G KP
Sbjct: 178 PIKWMAPESINF-------RRFTSAS------DVWMFGVCMWEILMHGVKP 215
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVYK----GILSDGNN----VAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G+FG V G+ D N VA+K+ K + SE E+++ + H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLN------I 144
++ + +C+ +++E G+L +L YS+N + E+L+
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V +EYL +S +H DL N+L+ E+ V +++DFG+++ + + T
Sbjct: 197 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD I + + DV+SFGVLL E FT
Sbjct: 253 GRLPVKWMAPEA-LFD------------RIYTHQSDVWSFGVLLWEIFT 288
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 39/233 (16%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNN-VAIKVFKL-QLGRAFRSFDS------------ 87
E + + LG+G++G V +G++ AIKV K Q + S D+
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
E +L+++ H N++K+F + + LV E G L + + + F D + NIM
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF-DECDAANIMKQ 154
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDEN---MVARVSDFGISKLLGDGEDSVTQTM 204
+ + YLH + IVH D+KP NILL+ + ++ DFG+S
Sbjct: 155 ILSGICYLHKHN----IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYKLRD 207
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP ++LK K + KCDV+S GV++ G P
Sbjct: 208 RLGTAYYIAP-----EVLKKK---------YNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF +V L+ AIK+ + + E +V+ + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 154
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 155 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP--- 208
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 209 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 238
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 36 DIQRATEGFNECNLLGTGSFGIVYKGILSDGNN----VAIKVFKLQLGRAFRS-FDSECE 90
+IQR C +G G FG V++GI N VAIK K + R F E
Sbjct: 34 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 91 VLRNVHHRNLLKIFSSCS-NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW 149
+R H +++K+ + NP + +++EL G L ++L Y LD + +
Sbjct: 92 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 149
Query: 150 LALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA-- 207
AL YL S VH D+ N+L+ N ++ DFG+S+ + EDS +
Sbjct: 150 TALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKL 202
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
I +MAP S F +F S DV+ FGV + E G KP
Sbjct: 203 PIKWMAPESINF-------RRFTSAS------DVWMFGVCMWEILMHGVKP 240
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 42 EGFNECNLLGTGSFGI-VYKGILSDGNNVAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
E F +LG GSF V L+ AIK+ + + E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K++ + + + L NG L ++ F +T R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I+H DLKP NILL+E+M +++DFG +K+L + T Y++P
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP--- 201
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K+A D+++ G ++ + G P
Sbjct: 202 --ELLTEKSA--------CKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 23/222 (10%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNV-AIKVFKLQLGRAFRSF-DSECEVLRNVHHRN 99
E F + + +G GSFG VYKGI + V AIK+ L+ E VL
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
+ + F S +++E + GS + L L+ I+ ++ L+YLH
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP--LEETYIATILREILKGLDYLH--- 133
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
S +H D+K +N+LL E +++DFG++ L D + + + + T +MAP
Sbjct: 134 -SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAP----- 185
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEM 261
+++K F K D++S G+ +E G+ P ++
Sbjct: 186 EVIKQSAYDF--------KADIWSLGITAIELAKGEPPNSDL 219
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 32/239 (13%)
Query: 50 LGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G GS GIV G VA+K L+ + +E ++R+ HH N++ ++SS
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
D +V+E + G+L + + +H ++ + + + V AL YLH + ++H D
Sbjct: 113 VGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIATVCLSVLRALSYLH----NQGVIHRD 166
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP--VSQLFDILKPKN 226
+K +ILL + ++SDFG + ++ + + T +MAP +S+L
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQV--SKEVPKRKXLVGTPYWMAPEVISRL-------- 216
Query: 227 AKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK--NWVNESLPHALTDV 283
+G+E D++S G++++E G+ P + E L+ + +SLP + D+
Sbjct: 217 -PYGTE------VDIWSLGIMVIEMIDGEPP----YFNEPPLQAMRRIRDSLPPRVKDL 264
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 32/224 (14%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSD---GNNVAIKVFKLQLGRA--FRSFDSECEVLRNVH 96
E +N +LG GSFG V K D A+KV + + E E+L+ +
Sbjct: 22 ERYNIVCMLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH 156
H N++K+F + +V EL G L + + F + + I+ V+ + Y+H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH-DAARIIKQVFSGITYMH 138
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
+ IVH DLKP NILL +++ ++ DFG+S + + + T Y+A
Sbjct: 139 KHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIA 191
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++L+ G KCDV+S GV+L +G P
Sbjct: 192 P-----EVLR---------GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 27/226 (11%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQ--LGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
L G ++KG GN++ +KV K++ R R F+ EC LR H N+L + +C
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 108 SNP--DFKALVLELMPNGSLENWLYS-HNYFLDTLERLNIMIDVWLALEYLHHGHSSAPI 164
+P L+ P GSL N L+ N+ +D + + +D +L H+ P+
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFL---HTLEPL 133
Query: 165 V-HCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
+ L ++ +DE+ AR+S D + S ++AP + L+
Sbjct: 134 IPRHALNSRSVXIDEDXTARIS-------XADVKFSFQSPGRXYAPAWVAP-----EALQ 181
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
K E D +SF VLL E T + P ++ EI K
Sbjct: 182 KK-----PEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXK 222
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 32/224 (14%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSD---GNNVAIKVFKLQLGRA--FRSFDSECEVLRNVH 96
E +N +LG GSFG V K D A+KV + + E E+L+ +
Sbjct: 22 ERYNIVCMLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH 156
H N++K+F + +V EL G L + + F + + I+ V+ + Y+H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH-DAARIIKQVFSGITYMH 138
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
+ IVH DLKP NILL +++ ++ DFG+S + + + T Y+A
Sbjct: 139 KHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIA 191
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++L+ G KCDV+S GV+L +G P
Sbjct: 192 P-----EVLR---------GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 36 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 148
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T T
Sbjct: 149 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWT 198
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 199 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 238
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 32 TSYLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNN----VAIKVFKLQLGRAFRS-FD 86
T +IQR C +G G FG V++GI N VAIK K + R F
Sbjct: 2 TRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL 59
Query: 87 SECEVLRNVHHRNLLKIFSSCS-NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
E +R H +++K+ + NP + +++EL G L ++L + LD +
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ AL YL S VH D+ N+L+ N ++ DFG+S+ + EDS +
Sbjct: 118 YQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTXXKAS 170
Query: 206 MA--TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
I +MAP S F +F S DV+ FGV + E G KP
Sbjct: 171 KGKLPIKWMAPESINF-------RRFTSAS------DVWMFGVCMWEILMHGVKP 212
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 21 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 74
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 75 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 133
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T T
Sbjct: 134 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWT 183
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 184 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 223
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKV-FKLQLGRA--FRSFDSECEVLR 93
Q A E F LG G FG VY + A+KV FK QL +A E E+
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
++ H N+L+++ + L+LE P G++ L + F D + ++ AL
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 148
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
Y H S ++H D+KP N+LL +++DFG S S + T+ Y+
Sbjct: 149 YCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLP 200
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++++ + + K D++S GVL E GK P
Sbjct: 201 P-----EMIEGR--------MHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVH 96
++ E F+ LG GS+G VYK I + G VAIK ++ + + E +++
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK--QVPVESDLQEIIKEISIMQQCD 82
Query: 97 HRNLLKIFSSC-SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
+++K + S N D +V+E GS+ + + N L E I+ LEYL
Sbjct: 83 SPHVVKYYGSYFKNTDL-WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYL 141
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
H +H D+K NILL+ A+++DFG++ L D + + T +MAP
Sbjct: 142 HFMRK----IHRDIKAGNILLNTEGHAKLADFGVAGQLTD--XMAKRNXVIGTPFWMAP- 194
Query: 216 SQLFDILKPKNAKFGSEGIISAKC--DVYSFGVLLMETFTGKKP 257
++++ I C D++S G+ +E GK P
Sbjct: 195 ----EVIQE----------IGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 32/224 (14%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSD---GNNVAIKVFKLQLGR--AFRSFDSECEVLRNVH 96
E +N +LG GSFG V K D A+KV + + E E+L+ +
Sbjct: 22 ERYNIVCMLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH 156
H N++K+F + +V EL G L + + F + + I+ V+ + Y+H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH-DAARIIKQVFSGITYMH 138
Query: 157 HGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
+ IVH DLKP NILL +++ ++ DFG+S + + + T Y+A
Sbjct: 139 KHN----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIA 191
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P ++L+ G KCDV+S GV+L +G P
Sbjct: 192 P-----EVLR---------GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVYK----GILSDGNN----VAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G+FG V G+ D N VA+K+ K + SE E+++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLY-------------SHN--YFLDTLERLNI 144
++ + +C+ +++E G+L +L SHN L + + ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V +EYL +S +H DL N+L+ E+ V +++DFG+++ + + T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD I + + DV+SFGVLL E FT
Sbjct: 212 GRLPVKWMAPEA-LFD------------RIYTHQSDVWSFGVLLWEIFT 247
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 50/234 (21%)
Query: 39 RATEGFNECNLLGTGSFGIVYKGILSD-GNNVAIKVF------KLQLGRAFRSFDSECEV 91
++ E + L+G GS+G+V K D G VAIK F K+ A R E ++
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR----EIKL 77
Query: 92 LRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLA 151
L+ + H NL+ + C LV E + + LD LE +D +
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFE-----------FVDHTILDDLELFPNGLDYQVV 126
Query: 152 LEYLH---------HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLL-GDGEDSVT 201
+YL H H+ I+H D+KP NIL+ ++ V ++ DFG ++ L GE
Sbjct: 127 QKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---V 180
Query: 202 QTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP + D+ K+G DV++ G L+ E F G+
Sbjct: 181 YDDEVATRWYRAPELLVGDV------KYGK------AVDVWAIGCLVTEMFMGE 222
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 29/216 (13%)
Query: 50 LGTGSFGIVY--KGILSDGNNVAIKVF-KLQL-GRAFRSFDSECEVLRNVHHRNLLKIFS 105
+G G+F V + IL+ G VA+K+ K QL + + E +++ ++H N++K+F
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
LV+E G + ++L +H + R + A++Y H IV
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF----IV 135
Query: 166 HCDLKPSNILLDENMVARVSDFGISK--LLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
H DLK N+LLD +M +++DFG S G+ D+ + Y AP +LF
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAP--ELF---- 184
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
+ K+ + DV+S GV+L +G P D
Sbjct: 185 -QGKKYD-----GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 24/223 (10%)
Query: 50 LGTGSFGIVYKGIL---SDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNVHHRNLLKIFS 105
LG G+FG V +G+ +VAIKV K +A E +++ + + ++++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
C + LV+E+ G L +L + ++ V + ++YL + V
Sbjct: 404 VCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN----FV 458
Query: 166 HCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIGYMAPVSQLFDILKP 224
H +L N+LL A++SDFG+SK LG + T ++ + + AP F
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF----- 513
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEMFTGEI 266
KF S++ DV+S+GV + E + G+KP +M E+
Sbjct: 514 --RKF------SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 548
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 29/216 (13%)
Query: 50 LGTGSFGIVY--KGILSDGNNVAIKVF-KLQL-GRAFRSFDSECEVLRNVHHRNLLKIFS 105
+G G+F V + IL+ G VA+K+ K QL + + E +++ ++H N++K+F
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
LV+E G + ++L +H + R + A++Y H IV
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF----IV 135
Query: 166 HCDLKPSNILLDENMVARVSDFGISK--LLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
H DLK N+LLD +M +++DFG S G+ D+ + Y AP +LF
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAP--ELF---- 184
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
+ K+ + DV+S GV+L +G P D
Sbjct: 185 -QGKKYD-----GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 124/279 (44%), Gaps = 45/279 (16%)
Query: 48 NLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVH-HRNLLKIFS 105
++LG G+ V I L A+K+ + Q G E E+L HRN+L++
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
D LV E M GS+ + ++ +F + LE ++ DV AL++LH + I
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHF-NELEASVVVQDVASALDFLH----NKGIA 133
Query: 166 HCDLKPSNILLDE-NMVA--RVSDFGIS---KLLGDGEDSVTQTM--TMATIGYMAPVSQ 217
H DLKP NIL + N V+ ++ DF + KL GD T + + YMAP
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP--- 190
Query: 218 LFDILKPKNAKFGSEG-IISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI---------- 266
++++ F E I +CD++S GV+L +G P F G
Sbjct: 191 --EVVE----AFSEEASIYDKRCDLWSLGVILYILLSGYPP----FVGRCGSDCGWDRGE 240
Query: 267 ---SLKNWVNESLPHALTDVVD---ANLRVSMKDVAAKL 299
+ +N + ES+ + D A++ + KD+ +KL
Sbjct: 241 ACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKL 279
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F +GTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E MP G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVYK----GILSDGNN----VAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G+FG V G+ D N VA+K+ K + SE E+++ + H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLN------I 144
++ + +C+ +++E G+L +L Y +N + E+L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V +EYL +S +H DL N+L+ E+ V +++DFG+++ + + T
Sbjct: 141 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD I + + DV+SFGVLL E FT
Sbjct: 197 GRLPVKWMAPEA-LFD------------RIYTHQSDVWSFGVLLWEIFT 232
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDG-NNVAIKVFKLQLGRAFRSFD---------SECEV 91
E + +LG G +V + I A+K+ + G +F + + E ++
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 92 LRNVH-HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM---ID 147
LR V H N++++ + F LV +LM G L ++L + L E IM ++
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLE 122
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA 207
V AL L+ IVH DLKP NILLD++M +++DFG S L GE
Sbjct: 123 VICALHKLN-------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCG 172
Query: 208 TIGYMAPVSQLFDI-LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
T Y+AP ++ + + + +G E D++S GV++ G P
Sbjct: 173 TPSYLAP--EIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 215
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 50 LGTGSFGIVY--KGILSDGNNVAIKVF-KLQLG-RAFRSFDSECEVLRNVHHRNLLKIFS 105
+G G+F V + IL+ G VAIK+ K QL + + E +++ ++H N++K+F
Sbjct: 20 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
L++E G + ++L +H + R + A++Y H IV
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQKR----IV 133
Query: 166 HCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPK 225
H DLK N+LLD +M +++DFG S G T + Y AP +LF +
Sbjct: 134 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAP--ELF-----Q 183
Query: 226 NAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
K+ + DV+S GV+L +G P D
Sbjct: 184 GKKYD-----GPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F +GTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E MP G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 29/216 (13%)
Query: 50 LGTGSFGIVY--KGILSDGNNVAIKVF-KLQL-GRAFRSFDSECEVLRNVHHRNLLKIFS 105
+G G+F V + IL+ G VA+K+ K QL + + E +++ ++H N++K+F
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
LV+E G + ++L +H + R + A++Y H IV
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF----IV 135
Query: 166 HCDLKPSNILLDENMVARVSDFGISK--LLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
H DLK N+LLD +M +++DFG S G+ D+ Y AP +LF
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC-----GAPPYAAP--ELF---- 184
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
+ K+ + DV+S GV+L +G P D
Sbjct: 185 -QGKKYD-----GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVF---KLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS 106
LG+G+FG+V++ + V + F L + + +E ++ +HH L+ + +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLHHPKLINLHDA 116
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
+ L+LE + G L + + + +Y + E +N M L+++H HS IVH
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE-HS---IVH 172
Query: 167 CDLKPSNILLDENMVARVS--DFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKP 224
D+KP NI+ + + V DFG++ L E +T AT + AP +I+
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTTATAEFAAP-----EIVDR 224
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVN 273
+ F + D+++ GVL +G P F GE L+ N
Sbjct: 225 EPVGFYT--------DMWAIGVLGYVLLSGLSP----FAGEDDLETLQN 261
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVYK----GILSDGNN----VAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G+FG V G+ D N VA+K+ K + SE E+++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLN------I 144
++ + +C+ +++E G+L +L Y +N + E+L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V +EYL +S +H DL N+L+ E+ V +++DFG+++ + + T
Sbjct: 156 AYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD I + + DV+SFGVLL E FT
Sbjct: 212 GRLPVKWMAPEA-LFD------------RIYTHQSDVWSFGVLLWEIFT 247
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 104/246 (42%), Gaps = 33/246 (13%)
Query: 21 IDLLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNN----VAIKVFKL 76
ID T T +IQR C +G G FG V++GI N VAIK K
Sbjct: 371 IDEEDTYTMPSTRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKN 428
Query: 77 QLGRAFRS-FDSECEVLRNVHHRNLLKIFSSCS-NPDFKALVLELMPNGSLENWLYSHNY 134
+ R F E +R H +++K+ + NP + +++EL G L ++L +
Sbjct: 429 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKF 486
Query: 135 FLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLG 194
LD + + AL YL S VH D+ N+L+ N ++ DFG+S+ +
Sbjct: 487 SLDLASLILYAYQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM- 541
Query: 195 DGEDSVTQTMTMAT--IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETF 252
EDS + I +MAP S F +F S DV+ FGV + E
Sbjct: 542 --EDSTYYKASKGKLPIKWMAPESINF-------RRFTSAS------DVWMFGVCMWEIL 586
Query: 253 T-GKKP 257
G KP
Sbjct: 587 MHGVKP 592
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 33/219 (15%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-------GRAFRSFDSECEVLRNVHHRNLL 101
LG GSFG V + G VA+K+ ++ GR R E LR + H +++
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER----EISYLRLLRHPHII 67
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
K++ + D +V+E N L +++ + + R + A+EY H
Sbjct: 68 KLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRHK-- 123
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
IVH DLKP N+LLDE++ +++DFG+S ++ DG T + + Y AP
Sbjct: 124 --IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAP------- 171
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
+ + DV+S GV+L + P D+
Sbjct: 172 -----EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 33/219 (15%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-------GRAFRSFDSECEVLRNVHHRNLL 101
LG GSFG V + G VA+K+ ++ GR R E LR + H +++
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER----EISYLRLLRHPHII 71
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
K++ + D +V+E N L +++ + + R + A+EY H
Sbjct: 72 KLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHR---- 125
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
IVH DLKP N+LLDE++ +++DFG+S ++ DG T + + Y AP
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAP------- 175
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
+ + DV+S GV+L + P D+
Sbjct: 176 -----EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 50 LGTGSFGIVYKGILSDGNN-VAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G+ IVY+ A+KV K + + + +E VL + H N++K+
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
P +LVLEL+ G L + + Y+ + + + + + A+ YLH IVH D
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSER-DAADAVKQILEAVAYLHENG----IVHRD 173
Query: 169 LKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPK 225
LKP N+L + +++DFG+SK++ E V T GY AP +IL +
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAP-----EIL--R 223
Query: 226 NAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+G E D++S G++ G +P
Sbjct: 224 GCAYGPE------VDMWSVGIITYILLCGFEP 249
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 33/219 (15%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-------GRAFRSFDSECEVLRNVHHRNLL 101
LG GSFG V + G VA+K+ ++ GR R E LR + H +++
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER----EISYLRLLRHPHII 76
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
K++ + D +V+E N L +++ + + R + A+EY H
Sbjct: 77 KLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHR---- 130
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
IVH DLKP N+LLDE++ +++DFG+S ++ DG T + + Y AP
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAP------- 180
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
+ + DV+S GV+L + P D+
Sbjct: 181 -----EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 45/225 (20%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQL-------GRAFRSFDSECEVLRNVHHRNLL 101
LG GSFG V + G VA+K+ ++ GR R E LR + H +++
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER----EISYLRLLRHPHII 77
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
K++ + D +V+E N L +++ + + R + A+EY H
Sbjct: 78 KLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHR---- 131
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
IVH DLKP N+LLDE++ +++DFG+S ++ DG T + + Y AP
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAP------- 181
Query: 222 LKPKNAKFGSEGIISAK------CDVYSFGVLLMETFTGKKPTDE 260
+IS K DV+S GV+L + P D+
Sbjct: 182 -----------EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 29/216 (13%)
Query: 50 LGTGSFGIVY--KGILSDGNNVAIKVF-KLQL-GRAFRSFDSECEVLRNVHHRNLLKIFS 105
+G G+F V + IL+ G VA+++ K QL + + E +++ ++H N++K+F
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
LV+E G + ++L +H + R + A++Y H IV
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF----IV 135
Query: 166 HCDLKPSNILLDENMVARVSDFGISK--LLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
H DLK N+LLD +M +++DFG S G+ D+ + Y AP +LF
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAP--ELF---- 184
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
+ K+ + DV+S GV+L +G P D
Sbjct: 185 -QGKKYD-----GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 36 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YA 148
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 149 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 198
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 199 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 238
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 32/218 (14%)
Query: 48 NLLGTGSFGIVYKGILSDGNN----VAIK-VFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
++LGTG+F V IL++ VAIK + K L S ++E VL + H N++
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ + L+++L+ G L + + ++ + + ++ V A++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-DASRLIFQVLDAVKYLH----DL 135
Query: 163 PIVHCDLKPSNIL---LDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
IVH DLKP N+L LDE+ +SDFG+SK+ G SV T T GY+AP
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGYVAP----- 187
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K S D +S GV+ G P
Sbjct: 188 EVLAQKP--------YSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVY----KGILSDGNNVAIKVFKLQLGRAFRS---FDSECEVL 92
A E LG GSFG+VY KG++ D + + + + R F +E V+
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-----HNYFLDTLERLNIMI- 146
+ + +++++ S +++ELM G L+++L S N + L+ MI
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 147 ---DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
++ + YL+ VH DL N ++ E+ ++ DFG+++ + + +
Sbjct: 128 MAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG 183
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ + +M+P S LK +G+ + DV+SFGV+L E T
Sbjct: 184 KGLLPVRWMSPES-----LK--------DGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 29/216 (13%)
Query: 50 LGTGSFGIVY--KGILSDGNNVAIKVF-KLQLG-RAFRSFDSECEVLRNVHHRNLLKIFS 105
+G G+F V + IL+ G VAIK+ K QL + + E +++ ++H N++K+F
Sbjct: 23 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
L++E G + ++L +H + R + A++Y H IV
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQKR----IV 136
Query: 166 HCDLKPSNILLDENMVARVSDFGISK--LLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
H DLK N+LLD +M +++DFG S +G D+ Y AP +LF
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC-----GAPPYAAP--ELF---- 185
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
+ K+ + DV+S GV+L +G P D
Sbjct: 186 -QGKKYD-----GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 36/247 (14%)
Query: 38 QRATEGFNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECE 90
Q+ + ++ LG+G F IV K S G A K K + RA R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 91 VLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL 150
+LR V H N++ + N L+LEL+ G L ++L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNI-LLDENMV---ARVSDFGISKLLGDGEDSVTQTMTM 206
+ YLH + I H DLKP NI LLD+N+ ++ DFG++ + DG V
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIF 179
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI 266
T ++AP ++ L + D++S GV+ +G P F G+
Sbjct: 180 GTPEFVAPEIVNYEPL-------------GLEADMWSIGVITYILLSGASP----FLGDT 222
Query: 267 SLKNWVN 273
+ N
Sbjct: 223 KQETLAN 229
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 32/218 (14%)
Query: 48 NLLGTGSFGIVYKGILSDGNN----VAIK-VFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
++LGTG+F V IL++ VAIK + K L S ++E VL + H N++
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ + L+++L+ G L + + ++ + + ++ V A++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-DASRLIFQVLDAVKYLH----DL 135
Query: 163 PIVHCDLKPSNIL---LDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
IVH DLKP N+L LDE+ +SDFG+SK+ G SV T T GY+AP
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGYVAP----- 187
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K S D +S GV+ G P
Sbjct: 188 EVLAQKP--------YSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVY----KGILSDGNNVAIKVFKLQLGRAFRS---FDSECEVL 92
A E LG GSFG+VY KG++ D + + + + R F +E V+
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-----HNYFLDTLERLNIMI- 146
+ + +++++ S +++ELM G L+++L S N + L+ MI
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 147 ---DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
++ + YL+ VH DL N ++ E+ ++ DFG+++ + + +
Sbjct: 137 MAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG 192
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ + +M+P S LK +G+ + DV+SFGV+L E T
Sbjct: 193 KGLLPVRWMSPES-----LK--------DGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 32/217 (14%)
Query: 48 NLLGTGSFGIVY--KGILSDGNNVAIKVFKLQLGRAFR--SFDSECEVLRNVHHRNLLKI 103
+LG+G+F V+ K L+ G A+K K AFR S ++E VL+ + H N++ +
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKK--SPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ LV++L+ G L + + + + L ++ V A++YLH
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-VIQQVLSAVKYLHEN----G 126
Query: 164 IVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFD 220
IVH DLKP N+L +EN ++DFG+SK+ +G + T GY+AP +
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAP-----E 177
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+L K S D +S GV+ G P
Sbjct: 178 VLAQKP--------YSKAVDCWSIGVITYILLCGYPP 206
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 32/218 (14%)
Query: 48 NLLGTGSFGIVYKGILSDGNN----VAIK-VFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
++LGTG+F V IL++ VAIK + K L S ++E VL + H N++
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ + L+++L+ G L + + ++ + + ++ V A++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-DASRLIFQVLDAVKYLH----DL 135
Query: 163 PIVHCDLKPSNIL---LDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
IVH DLKP N+L LDE+ +SDFG+SK+ G SV T T GY+AP
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGYVAP----- 187
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K S D +S GV+ G P
Sbjct: 188 EVLAQKP--------YSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVY--------KGILSDGNNVAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G+FG V K + VA+K+ K + SE E+++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLNI------ 144
++ + +C+ +++E G+L +L YS++ E++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ +EYL +S +H DL N+L+ EN V R++DFG+++ + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD + + + DV+SFGVL+ E FT
Sbjct: 219 GRLPVKWMAPEA-LFD------------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 32/218 (14%)
Query: 48 NLLGTGSFGIVYKGILSDGNN----VAIK-VFKLQLGRAFRSFDSECEVLRNVHHRNLLK 102
++LGTG+F V IL++ VAIK + K L S ++E VL + H N++
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ + L+++L+ G L + + ++ + + ++ V A++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-DASRLIFQVLDAVKYLH----DL 135
Query: 163 PIVHCDLKPSNIL---LDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
IVH DLKP N+L LDE+ +SDFG+SK+ G SV T T GY+AP
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGYVAP----- 187
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L K S D +S GV+ G P
Sbjct: 188 EVLAQKP--------YSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 29/216 (13%)
Query: 50 LGTGSFGIVY--KGILSDGNNVAIKVF-KLQL-GRAFRSFDSECEVLRNVHHRNLLKIFS 105
+G G+F V + IL+ G VA+++ K QL + + E +++ ++H N++K+F
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
LV+E G + ++L +H + R + A++Y H IV
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF----IV 135
Query: 166 HCDLKPSNILLDENMVARVSDFGISK--LLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
H DLK N+LLD +M +++DFG S G+ D + Y AP +LF
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC-----GSPPYAAP--ELF---- 184
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
+ K+ + DV+S GV+L +G P D
Sbjct: 185 -QGKKYD-----GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVY--------KGILSDGNNVAIKVFKLQ-LGRAFRSFDSECEVLRNV-HHRN 99
LG G+FG V K + VA+K+ K + SE E+++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLNI------ 144
++ + +C+ +++E G+L +L YS++ E++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ +EYL +S +H DL N+L+ EN V +++DFG+++ + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD + + + DV+SFGVL+ E FT
Sbjct: 219 GRLPVKWMAPEA-LFD------------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 48/279 (17%)
Query: 41 TEGFNECNLLGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVL-RNVHHR 98
++G+ +G GS+ + + N A+KV + ++ R E E+L R H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKV----IDKSKRDPSEEIEILLRYGQHP 81
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
N++ + + LV ELM G L + + +F + E ++ + +EYLH
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSER-EASFVLHTIGKTVEYLH-- 138
Query: 159 HSSAPIVHCDLKPSNIL-LDEN---MVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
S +VH DLKPSNIL +DE+ R+ DFG +K L E+ + T T ++AP
Sbjct: 139 --SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMT-PCYTANFVAP 194
Query: 215 VSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP--------TDEMFT--- 263
++LK + G CD++S G+LL G P +E+ T
Sbjct: 195 -----EVLKRQGYDEG--------CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIG 241
Query: 264 -GEISLK--NW--VNESLPHALTDV--VDANLRVSMKDV 295
G+ +L NW V+E+ ++ + VD + R++ K V
Sbjct: 242 SGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQV 280
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 32/231 (13%)
Query: 38 QRATEGFNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECE 90
Q+ + ++ LG+G F IV K S G A K K + RA R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 91 VLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL 150
+LR V H N++ + N L+LEL+ G L ++L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNI-LLDENMV---ARVSDFGISKLLGDGEDSVTQTMTM 206
+ YLH + I H DLKP NI LLD+N+ ++ DFG++ + DG V
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIF 179
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
T ++AP ++ L + D++S GV+ +G P
Sbjct: 180 GTPEFVAPEIVNYEPL-------------GLEADMWSIGVITYILLSGASP 217
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 36/247 (14%)
Query: 38 QRATEGFNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECE 90
Q+ + ++ LG+G F IV K S G A K K + RA R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 91 VLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL 150
+LR V H N++ + N L+LEL+ G L ++L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNI-LLDENMV---ARVSDFGISKLLGDGEDSVTQTMTM 206
+ YLH + I H DLKP NI LLD+N+ ++ DFG++ + DG V
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIF 179
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI 266
T ++AP ++ L + D++S GV+ +G P F G+
Sbjct: 180 GTPEFVAPEIVNYEPL-------------GLEADMWSIGVITYILLSGASP----FLGDT 222
Query: 267 SLKNWVN 273
+ N
Sbjct: 223 KQETLAN 229
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 32/231 (13%)
Query: 38 QRATEGFNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECE 90
Q+ + ++ LG+G F IV K S G A K K + RA R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 91 VLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL 150
+LR V H N++ + N L+LEL+ G L ++L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNI-LLDENMV---ARVSDFGISKLLGDGEDSVTQTMTM 206
+ YLH + I H DLKP NI LLD+N+ ++ DFG++ + DG V
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIF 179
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
T ++AP ++ L + D++S GV+ +G P
Sbjct: 180 GTPEFVAPEIVNYEPL-------------GLEADMWSIGVITYILLSGASP 217
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 36 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 148
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 149 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 198
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 199 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+++D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 36/233 (15%)
Query: 44 FNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV-HHRNLL 101
F L+G G++G VYKG + G AIKV + G E +L+ HHRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 102 KIFSSC--SNP----DFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLA---- 151
+ + NP D LV+E GS+ + + + + N + + W+A
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN--------TKGNTLKEEWIAYICR 136
Query: 152 --LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT-MAT 208
L L H H ++H D+K N+LL EN ++ DFG+S L + +V + T + T
Sbjct: 137 EILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGT 192
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEM 261
+MAP D + K D++S G+ +E G P +M
Sbjct: 193 PYWMAPEVIACD--------ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 36/247 (14%)
Query: 38 QRATEGFNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECE 90
Q+ + ++ LG+G F IV K S G A K K + RA R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 91 VLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL 150
+LR V H N++ + N L+LEL+ G L ++L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNI-LLDENMV---ARVSDFGISKLLGDGEDSVTQTMTM 206
+ YLH + I H DLKP NI LLD+N+ ++ DFG++ + DG V
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIF 179
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI 266
T ++AP ++ L + D++S GV+ +G P F G+
Sbjct: 180 GTPEFVAPEIVNYEPL-------------GLEADMWSIGVITYILLSGASP----FLGDT 222
Query: 267 SLKNWVN 273
+ N
Sbjct: 223 KQETLAN 229
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 39/236 (16%)
Query: 39 RATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHH 97
R F E +LG G+FG V K + D AIK + + SE +L +++H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 98 -------------RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI 144
RN +K ++ + +E N +L + ++S N E +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGED------ 198
+ AL Y+H S I+H DLKP NI +DE+ ++ DFG++K + D
Sbjct: 122 FRQILEALSYIH----SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 199 ----SVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
+ +T A M +++ D G + K D+YS G++ E
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLD----------GTGHYNEKIDMYSLGIIFFE 223
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 143 NIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQ 202
I + + ALE+LH S ++H D+KPSN+L++ ++ DFGIS L DSV +
Sbjct: 157 KIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL---VDSVAK 210
Query: 203 TMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMF 262
T+ YMAP + N + +G S K D++S G+ ++E + P D
Sbjct: 211 TIDAGCKPYMAP--------ERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWG 261
Query: 263 TGEISLKNWVNESLPHALTDVVDANL 288
T LK V E P D A
Sbjct: 262 TPFQQLKQVVEEPSPQLPADKFSAEF 287
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+++D+ +V+DFG++K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQL--GRAFRSFDSECEVLRNVHHRNLLKIFSS 106
LG G+F +V + + + G A K+ + R F+ + E + R + H N++++ S
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
F LV +L+ G L + + ++ + I LE + + HS+ IVH
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ----QILESIAYCHSNG-IVH 127
Query: 167 CDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
+LKP N+LL + +++DFG++ + D E T GY++P ++LK
Sbjct: 128 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---AWHGFAGTPGYLSP-----EVLK 179
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ S D+++ GV+L G P
Sbjct: 180 --------KDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 48/279 (17%)
Query: 41 TEGFNECNLLGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVL-RNVHHR 98
++G+ +G GS+ + + N A+KV + ++ R E E+L R H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKV----IDKSKRDPSEEIEILLRYGQHP 81
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
N++ + + LV ELM G L + + +F + E ++ + +EYLH
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSER-EASFVLHTIGKTVEYLH-- 138
Query: 159 HSSAPIVHCDLKPSNIL-LDEN---MVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
S +VH DLKPSNIL +DE+ R+ DFG +K L E+ + T T ++AP
Sbjct: 139 --SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMT-PCYTANFVAP 194
Query: 215 VSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP--------TDEMFT--- 263
++LK + G CD++S G+LL G P +E+ T
Sbjct: 195 -----EVLKRQGYDEG--------CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIG 241
Query: 264 -GEISLK--NW--VNESLPHALTDV--VDANLRVSMKDV 295
G+ +L NW V+E+ ++ + VD + R++ K V
Sbjct: 242 SGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQV 280
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F +GTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQL--GRAFRSFDSECEVLRNVHHRNLLKIFSS 106
LG G+F +V + + + G A K+ + R F+ + E + R + H N++++ S
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
F LV +L+ G L + + ++ + I LE + + HS+ IVH
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ----QILESIAYCHSNG-IVH 128
Query: 167 CDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
+LKP N+LL + +++DFG++ + D E T GY++P ++LK
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---AWHGFAGTPGYLSP-----EVLK 180
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ S D+++ GV+L G P
Sbjct: 181 --------KDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 33/233 (14%)
Query: 39 RATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKL---QLGRAFRSFDSECEVLRN 94
R F LG G FG+V++ D N AIK +L +L R E + L
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELARE--KVMREVKALAK 59
Query: 95 VHHRNLLKIFSS-----------CSNPD-FKALVLELMPNGSLENWLYSHNYFLDTLER- 141
+ H +++ F++ S+P + + ++L +L++W+ + ++ ER
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM-NGRCTIEERERS 118
Query: 142 --LNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS 199
L+I + + A+E+LH S ++H DLKPSNI + V +V DFG+ + E+
Sbjct: 119 VCLHIFLQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 200 VTQTMTMATIGYMAPVSQLFDIL--KPKNAKFGSEGIISAKCDVYSFGVLLME 250
QT+ Y Q+ L P+ S S K D++S G++L E
Sbjct: 175 --QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS---YSHKVDIFSLGLILFE 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 36/247 (14%)
Query: 38 QRATEGFNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECE 90
Q+ + ++ LG+G F IV K S G A K K + RA R + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 91 VLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL 150
+LR V H N++ + N L+LEL+ G L ++L + L E + + +
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNI-LLDENMV---ARVSDFGISKLLGDGEDSVTQTMTM 206
+ YLH + I H DLKP NI LLD+N+ ++ DFG++ + DG V
Sbjct: 127 GVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIF 179
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI 266
T ++AP ++ L + D++S GV+ +G P F G+
Sbjct: 180 GTPEFVAPEIVNYEPL-------------GLEADMWSIGVITYILLSGASP----FLGDT 222
Query: 267 SLKNWVN 273
+ N
Sbjct: 223 KQETLAN 229
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVHH 97
E ++ +G G++G+VYK + G A+K K++L + S E +L+ + H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKH 59
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N++K++ LV E + + L+ L L+++ + ++ + + Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH- 117
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
++H DLKP N+L++ +++DFG+++ G T + T+ Y AP
Sbjct: 118 ---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH--EIVTLWYRAP--- 169
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMFT-----GEI 266
D+L GS+ S D++S G + E F G D++ G
Sbjct: 170 --DVL------MGSKK-YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTP 220
Query: 267 SLKNWVN 273
+ KNW N
Sbjct: 221 NSKNWPN 227
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+++D+ +V+DFG++K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 47/235 (20%)
Query: 49 LLGTGSFGIVYK----GILSDGNN--VAIKVFKLQLGRAFR-SFDSECEVLRNV-HHRNL 100
+LG+G+FG V GI G + VA+K+ K + + R + SE +++ + H N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 101 LKIFSSCSNPDFKALVLELMPNGSLENWL-------------YSHNYFLDTLERLNIMI- 146
+ + +C+ L+ E G L N+L Y + L+ E LN++
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 147 --------DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGED 198
V +E+L VH DL N+L+ V ++ DFG+++ + +
Sbjct: 172 EDLLCFAYQVAKGMEFLEF----KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 199 SVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
V + + +MAP S LF EGI + K DV+S+G+LL E F+
Sbjct: 228 YVVRGNARLPVKWMAPES-LF------------EGIYTIKSDVWSYGILLWEIFS 269
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 102/263 (38%), Gaps = 76/263 (28%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFD--------SECEVLRNVHHRNLL 101
+G GS+G+V I + AI+ K+ R + +E +++ +HH N+
Sbjct: 34 IGQGSYGVVRVAI--ENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLD------------------------ 137
+++ + + LV+EL G L + L N F+D
Sbjct: 92 RLYEVYEDEQYICLVMELCHGGHLLDKL---NVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 138 ----------------TLERL--NIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDEN 179
E+L NIM ++ AL YLH + I H D+KP N L N
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH----NQGICHRDIKPENFLFSTN 204
Query: 180 MVARVS--DFGISK---LLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGI 234
+ DFG+SK L +GE T T ++AP ++L N +G
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGE-YYGMTTKAGTPYFVAP-----EVLNTTNESYG---- 254
Query: 235 ISAKCDVYSFGVLLMETFTGKKP 257
KCD +S GVLL G P
Sbjct: 255 --PKCDAWSAGVLLHLLLMGAVP 275
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQL--GRAFRSFDSECEVLRNVHHRNLLKIFSS 106
LG G+F +V + + + G A K+ + R F+ + E + R + H N++++ S
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
F LV +L+ G L + + ++ + I LE + + HS+ IVH
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ----QILESIAYCHSNG-IVH 128
Query: 167 CDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
+LKP N+LL + +++DFG++ + D E T GY++P ++LK
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---AWHGFAGTPGYLSP-----EVLK 180
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ S D+++ GV+L G P
Sbjct: 181 --------KDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 50 LGTGSFGIVY--------KGILSDGNNVAIKVFKLQ-LGRAFRSFDSECEVLRNV-HHRN 99
LG G+FG V K + VA+K+ K + SE E+++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSH-------NYFLDTLERLNIMIDVWLAL 152
++ + +C+ +++E G+L +L + +Y ++ + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 153 EY-LHHGH---SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
Y L G +S +H DL N+L+ EN V +++DFG+++ + + + T
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD + + + DV+SFGVL+ E FT
Sbjct: 223 VKWMAPEA-LFD------------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+++D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVHH 97
E ++ +G G++G+VYK + G A+K K++L + S E +L+ + H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKH 59
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N++K++ LV E + + L+ L L+++ + ++ + + Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH- 117
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
++H DLKP N+L++ +++DFG+++ G T + T+ Y AP
Sbjct: 118 ---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH--EVVTLWYRAP--- 169
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMFT-----GEI 266
D+L GS+ S D++S G + E F G D++ G
Sbjct: 170 --DVL------MGSKK-YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTP 220
Query: 267 SLKNWVN 273
+ KNW N
Sbjct: 221 NSKNWPN 227
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 41/255 (16%)
Query: 16 KIIAPIDLLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSD-GNNVAIKVF 74
K I W+ L+I F+ ++G G FG VY +D G A+K
Sbjct: 164 KFIESDKFTRFCQWKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL 222
Query: 75 KLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS--CS----------NPDFKALVLELMPN 122
+ R + E L ++ R +L + S+ C PD + +L+LM
Sbjct: 223 DKK-----RIKMKQGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 276
Query: 123 GSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVA 182
G L L H F + R ++ L LE++H+ +V+ DLKP+NILLDE+
Sbjct: 277 GDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF----VVYRDLKPANILLDEHGHV 331
Query: 183 RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVY 242
R+SD G++ + ++ T GYMAP ++L+ K + S D +
Sbjct: 332 RISDLGLACDFSKKKPHA----SVGTHGYMAP-----EVLQ-KGVAYDSSA------DWF 375
Query: 243 SFGVLLMETFTGKKP 257
S G +L + G P
Sbjct: 376 SLGCMLFKLLRGHSP 390
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVHH 97
E ++ +G G++G+VYK + G A+K K++L + S E +L+ + H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKH 59
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N++K++ LV E + + L+ L L+++ + ++ + + Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH- 117
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
++H DLKP N+L++ +++DFG+++ G T + T+ Y AP
Sbjct: 118 ---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH--EVVTLWYRAP--- 169
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMFT-----GEI 266
D+L GS+ S D++S G + E F G D++ G
Sbjct: 170 --DVL------MGSKK-YSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTP 220
Query: 267 SLKNWVN 273
+ KNW N
Sbjct: 221 NSKNWPN 227
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 41/255 (16%)
Query: 16 KIIAPIDLLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSD-GNNVAIKVF 74
K I W+ L+I F+ ++G G FG VY +D G A+K
Sbjct: 163 KFIESDKFTRFCQWKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL 221
Query: 75 KLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS--CS----------NPDFKALVLELMPN 122
+ R + E L ++ R +L + S+ C PD + +L+LM
Sbjct: 222 DKK-----RIKMKQGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 275
Query: 123 GSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVA 182
G L L H F + R ++ L LE++H+ +V+ DLKP+NILLDE+
Sbjct: 276 GDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF----VVYRDLKPANILLDEHGHV 330
Query: 183 RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVY 242
R+SD G++ + ++ T GYMAP ++L+ K + S D +
Sbjct: 331 RISDLGLACDFSKKKPHA----SVGTHGYMAP-----EVLQ-KGVAYDSSA------DWF 374
Query: 243 SFGVLLMETFTGKKP 257
S G +L + G P
Sbjct: 375 SLGCMLFKLLRGHSP 389
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 36 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L K+ S + +V+E P G + + L F + R
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YA 148
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+++D+ +V+DFG +K + +T
Sbjct: 149 AQIVLTFEYLH----SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------GRTWX 198
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 199 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 238
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVY--------KGILSDGNNVAIKVFKLQ-LGRAFRSFDSECEVLRNV-HHRN 99
LG G+FG V K + VA+K+ K + SE E+++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLNI------ 144
++ + +C+ +++E G+L +L YS++ E++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ +EYL +S +H DL N+L+ EN V +++DFG+++ + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD + + + DV+SFGVL+ E FT
Sbjct: 219 GRLPVKWMAPEA-LFD------------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 25/221 (11%)
Query: 48 NLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVH-HRNLLKIFS 105
LLG G++ V + L +G A+K+ + Q G + E E L ++N+L++
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
+ LV E + GS+ + +F + E ++ DV AL++LH + I
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQKQKHF-NEREASRVVRDVAAALDFLH----TKGIA 133
Query: 166 HCDLKPSNILLDE-NMVARVS----DFGISKLLGDGEDSVTQ---TMTMATIGYMAP-VS 216
H DLKP NIL + V+ V D G L + +T T + YMAP V
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++F A F +CD++S GV+L +G P
Sbjct: 194 EVFT----DQATF-----YDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 28 TWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSD-GNNVAIKVF-----KLQLGRA 81
W+ L+I F+ ++G G FG VY +D G A+K K++ G
Sbjct: 176 QWKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET 234
Query: 82 FRSFDSECEVLRNVHHRNLLKIFSS--CS----------NPDFKALVLELMPNGSLENWL 129
++ R +L + S+ C PD + +L+LM G L L
Sbjct: 235 L-----------ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL 283
Query: 130 YSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGI 189
H F + R ++ L LE++H+ +V+ DLKP+NILLDE+ R+SD G+
Sbjct: 284 SQHGVFSEADMRF-YAAEIILGLEHMHNRF----VVYRDLKPANILLDEHGHVRISDLGL 338
Query: 190 SKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLM 249
+ + ++ T GYMAP ++L+ K + S D +S G +L
Sbjct: 339 ACDFSKKKPHA----SVGTHGYMAP-----EVLQ-KGVAYDSSA------DWFSLGCMLF 382
Query: 250 ETFTGKKP 257
+ G P
Sbjct: 383 KLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 28 TWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSD-GNNVAIKVF-----KLQLGRA 81
W+ L+I F+ ++G G FG VY +D G A+K K++ G
Sbjct: 176 QWKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET 234
Query: 82 FRSFDSECEVLRNVHHRNLLKIFSS--CS----------NPDFKALVLELMPNGSLENWL 129
++ R +L + S+ C PD + +L+LM G L L
Sbjct: 235 L-----------ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL 283
Query: 130 YSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGI 189
H F + R ++ L LE++H+ +V+ DLKP+NILLDE+ R+SD G+
Sbjct: 284 SQHGVFSEADMRF-YAAEIILGLEHMHNRF----VVYRDLKPANILLDEHGHVRISDLGL 338
Query: 190 SKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLM 249
+ + ++ T GYMAP ++L+ K + S D +S G +L
Sbjct: 339 ACDFSKKKPHA----SVGTHGYMAP-----EVLQ-KGVAYDSSA------DWFSLGCMLF 382
Query: 250 ETFTGKKP 257
+ G P
Sbjct: 383 KLLRGHSP 390
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ GN+ A+K+ Q + +
Sbjct: 28 QNTAHLD------QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT 81
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YA 140
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 141 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 190
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 191 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 230
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 23/229 (10%)
Query: 36 DIQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKL-----QLGRAFRS-FDSEC 89
++Q E F ++G G+FG V ++ N I K+ L RA + F E
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEV--AVVKMKNTERIYAMKILNKWEMLKRAETACFREER 125
Query: 90 EVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-HNYFLDTLERLNIMIDV 148
+VL N + + + + + + LV++ G L L + + + R I ++
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG-EM 184
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
LA++ +H H VH D+KP N+LLD N R++DFG S L + + +V ++ + T
Sbjct: 185 VLAIDSIHQLH----YVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGT 239
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
Y++P ++ ++ K+G E CD +S GV + E G+ P
Sbjct: 240 PDYISP--EILQAMEDGMGKYGPE------CDWWSLGVCMYEMLYGETP 280
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 14/144 (9%)
Query: 115 LVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLA-LEYLHHGHSSAPIVHCDLKPSN 173
+ +ELM + + Y ++ D + I+ + LA ++ L+H + I+H D+KPSN
Sbjct: 98 ICMELMSTSFDKFYKYVYSVLDDVIPE-EILGKITLATVKALNHLKENLKIIHRDIKPSN 156
Query: 174 ILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEG 233
ILLD + ++ DFGIS G DS+ +T YMAP + + P ++ G +
Sbjct: 157 ILLDRSGNIKLCDFGIS---GQLVDSIAKTRDAGCRPYMAP-----ERIDPSASRQGYD- 207
Query: 234 IISAKCDVYSFGVLLMETFTGKKP 257
+ DV+S G+ L E TG+ P
Sbjct: 208 ---VRSDVWSLGITLYELATGRFP 228
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVY--------KGILSDGNNVAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G+FG V K + VA+K+ K + SE E+++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLNI------ 144
++ + +C+ +++E G+L +L YS++ E++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ +EYL +S +H DL N+L+ EN V +++DFG+++ + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD + + + DV+SFGVL+ E FT
Sbjct: 219 GRLPVKWMAPEA-LFD------------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVY----KGILSDGNNVAIKVFKLQLGRAFRS---FDSECEVL 92
A E LG GSFG+VY KG++ D + + + + R F +E V+
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-----HNYFLDTLERLNIMI- 146
+ + +++++ S +++ELM G L+++L S N + L+ MI
Sbjct: 74 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 133
Query: 147 ---DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
++ + YL+ VH DL N ++ E+ ++ DFG+++ + + +
Sbjct: 134 MAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 189
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ + +M+P S LK +G+ + DV+SFGV+L E T
Sbjct: 190 KGLLPVRWMSPES-----LK--------DGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVY--------KGILSDGNNVAIKVFKLQ-LGRAFRSFDSECEVLRNV-HHRN 99
LG G+FG V K + VA+K+ K + SE E+++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLNI------ 144
++ + +C+ +++E G+L +L YS++ E++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ +EYL +S +H DL N+L+ EN V +++DFG+++ + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD + + + DV+SFGVL+ E FT
Sbjct: 219 GRLPVKWMAPEA-LFD------------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E P G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+++D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 99/231 (42%), Gaps = 33/231 (14%)
Query: 36 DIQRATEGFNECNLLGTGSFGIVYKGILSDGNN----VAIKVFKLQLGRAFRS-FDSECE 90
+IQR C +G G FG V++GI N VAIK K + R F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 91 VLRNVHHRNLLKIFSSCS-NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW 149
+R H +++K+ + NP + +++EL G L ++L + LD + +
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 150 LALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA-- 207
AL YL S VH D+ N+L+ ++ DFG+S+ + EDS +
Sbjct: 122 TALAYLE----SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM---EDSTYYKASKGKL 174
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
I +MAP S F +F S DV+ FGV + E G KP
Sbjct: 175 PIKWMAPESINF-------RRFTSAS------DVWMFGVCMWEILMHGVKP 212
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 118/280 (42%), Gaps = 45/280 (16%)
Query: 50 LGTGSFGIVYKG-ILSDGNNVAIK---VFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFS 105
+G G F VY+ L DG VA+K +F L +A E ++L+ ++H N++K ++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-------ALEYLHHG 158
S + +VLEL G L + +RL VW ALE++H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKH----FKKQKRLIPERTVWKYFVQLCSALEHMH-- 153
Query: 159 HSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
S ++H D+KP+N+ + V ++ D G+ + + + T YM+P
Sbjct: 154 --SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYYMSP---- 205
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGE----ISLKNWVNE 274
+ E + K D++S G LL E + P F G+ SL + +
Sbjct: 206 ---------ERIHENGYNFKSDIWSLGCLLYEMAALQSP----FYGDKMNLYSLCKKIEQ 252
Query: 275 -SLPHALTDVVDANLR--VSMKDVAAKLKKIRVKFLYDVA 311
P +D LR V+M K+ V ++YDVA
Sbjct: 253 CDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVA 292
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVY----KGILSDGNNVAIKVFKLQLGRAFRS---FDSECEVL 92
A E LG GSFG+VY KG++ D + + + + R F +E V+
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-----HNYFLDTLERLNIMI- 146
+ + +++++ S +++ELM G L+++L S N + L+ MI
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 147 ---DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
++ + YL+ VH DL N ++ E+ ++ DFG+++ + + +
Sbjct: 136 MAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ + +M+P S LK +G+ + DV+SFGV+L E T
Sbjct: 192 KGLLPVRWMSPES-----LK--------DGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVY----KGILSDGNNVAIKVFKLQLGRAFRS---FDSECEVL 92
A E LG GSFG+VY KG++ D + + + + R F +E V+
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-----HNYFLDTLERLNIMI- 146
+ + +++++ S +++ELM G L+++L S N + L+ MI
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 147 ---DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
++ + YL+ VH DL N ++ E+ ++ DFG+++ + + +
Sbjct: 136 MAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ + +M+P S LK +G+ + DV+SFGV+L E T
Sbjct: 192 KGLLPVRWMSPES-----LK--------DGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQL--GRAFRSFDSECEVLRNVHHRNLLKIFSS 106
LG G+F +V + + + G A K+ + R F+ + E + R + H N++++ S
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
F LV +L+ G L + + ++ + + + + + ++ Y H S IVH
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIVAREFYSEA-DASHCIQQILESIAYCH----SNGIVH 151
Query: 167 CDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
+LKP N+LL + +++DFG++ + D E T GY++P ++LK
Sbjct: 152 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---AWHGFAGTPGYLSP-----EVLK 203
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ S D+++ GV+L G P
Sbjct: 204 --------KDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 103/246 (41%), Gaps = 33/246 (13%)
Query: 21 IDLLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNN----VAIKVFKL 76
ID T T +IQR C +G G FG V++GI N VAIK K
Sbjct: 371 IDEEDTYTMPSTRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKN 428
Query: 77 QLGRAFRS-FDSECEVLRNVHHRNLLKIFSSCS-NPDFKALVLELMPNGSLENWLYSHNY 134
+ R F E +R H +++K+ + NP + +++EL G L ++L +
Sbjct: 429 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKF 486
Query: 135 FLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLG 194
LD + + AL YL S VH D+ N+L+ ++ DFG+S+ +
Sbjct: 487 SLDLASLILYAYQLSTALAYLE----SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM- 541
Query: 195 DGEDSVTQTMTMAT--IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETF 252
EDS + I +MAP S F +F S DV+ FGV + E
Sbjct: 542 --EDSTYYKASKGKLPIKWMAPESINF-------RRFTSAS------DVWMFGVCMWEIL 586
Query: 253 T-GKKP 257
G KP
Sbjct: 587 MHGVKP 592
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 23/229 (10%)
Query: 36 DIQRATEGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKL-----QLGRAFRS-FDSEC 89
++Q E F ++G G+FG V ++ N I K+ L RA + F E
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEV--AVVKMKNTERIYAMKILNKWEMLKRAETACFREER 141
Query: 90 EVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-HNYFLDTLERLNIMIDV 148
+VL N + + + + + + LV++ G L L + + + R I ++
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG-EM 200
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
LA++ +H H VH D+KP N+LLD N R++DFG S L + + +V ++ + T
Sbjct: 201 VLAIDSIHQLH----YVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGT 255
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
Y++P ++ ++ K+G E CD +S GV + E G+ P
Sbjct: 256 PDYISP--EILQAMEDGMGKYGPE------CDWWSLGVCMYEMLYGETP 296
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ GN+ A+K+ Q + +
Sbjct: 36 QNTAHLD------QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 148
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 149 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 198
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 199 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 238
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVY----KGILSDGNNVAIKVFKLQLGRAFRS---FDSECEVL 92
A E LG GSFG+VY KG++ D + + + + R F +E V+
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-----HNYFLDTLERLNIMI- 146
+ + +++++ S +++ELM G L+++L S N + L+ MI
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 142
Query: 147 ---DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
++ + YL+ VH DL N ++ E+ ++ DFG+++ + + +
Sbjct: 143 MAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 198
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ + +M+P S LK +G+ + DV+SFGV+L E T
Sbjct: 199 KGLLPVRWMSPES-----LK--------DGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVY--------KGILSDGNNVAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G FG V K + VA+K+ K + SE E+++ + H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLNI------ 144
++ + +C+ +++E G+L +L YS++ E++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ +EYL +S +H DL N+L+ EN V +++DFG+++ + + + T
Sbjct: 209 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD + + + DV+SFGVL+ E FT
Sbjct: 265 GRLPVKWMAPEA-LFD------------RVYTHQSDVWSFGVLMWEIFT 300
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVY----KGILSDGNNVAIKVFKLQLGRAFRS---FDSECEVL 92
A E LG GSFG+VY KG++ D + + + + R F +E V+
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-----HNYFLDTLERLNIMI- 146
+ + +++++ S +++ELM G L+++L S N + L+ MI
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 147 ---DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
++ + YL+ VH DL N ++ E+ ++ DFG+++ + + +
Sbjct: 137 MAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 192
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ + +M+P S LK +G+ + DV+SFGV+L E T
Sbjct: 193 KGLLPVRWMSPES-----LK--------DGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ GN+ A+K+ Q + +
Sbjct: 28 QNTAHLD------QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT 81
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 140
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 141 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 190
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 191 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ GN+ A+K+ Q + +
Sbjct: 36 QNTAHLD------QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 148
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 149 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 198
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 199 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 238
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVYK----GILSDGNNVAIKVFKLQLGRAFRSFD-----SECEVLRNV-HHRN 99
LG G+FG V GI D A+ V L D SE E+++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLNI------ 144
++ + +C+ +++E G+L +L YS++ E++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ +EYL +S +H DL N+L+ EN V +++DFG+++ + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD + + + DV+SFGVL+ E FT
Sbjct: 219 GRLPVKWMAPEA-LFD------------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ GN+ A+K+ Q + +
Sbjct: 36 QNTAHLD------QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 148
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 149 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 198
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 199 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ GN+ A+K+ Q + +
Sbjct: 56 QNTAHLD------QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT 109
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E +P G + + L F + R
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YA 168
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 169 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 218
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 219 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 258
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 36 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L K+ S + +V+E P G + + L F + R
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YA 148
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+++D+ +V+DFG +K + +T
Sbjct: 149 AQIVLTFEYLH----SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------GRTWX 198
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 199 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 238
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 101/232 (43%), Gaps = 33/232 (14%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKVFKLQLGRAFRSFDSECEVLR 93
L I+ E F +LG GSFG V+ N AIK K + D EC ++
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV--VLMDDDVECTMVE 68
Query: 94 NV------HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
H L +F + + V+E + G L + S + F D +
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF-DLSRATFYAAE 127
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISK--LLGDGEDSVTQTMT 205
+ L L++LH S IV+ DLK NILLD++ +++DFG+ K +LGD + +
Sbjct: 128 IILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE----F 179
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
T Y+AP +IL G + + D +SFGVLL E G+ P
Sbjct: 180 CGTPDYIAP-----EIL------LGQK--YNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 33/230 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVY----KGILSDGNNVAIKVFKLQLGRAFRS---FDSECEVL 92
A E LG GSFG+VY KG++ D + + + + R F +E V+
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-----HNYFLDTLERLNIMI- 146
+ + +++++ S +++ELM G L+++L S N + L+ MI
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 164
Query: 147 ---DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
++ + YL+ + VH DL N ++ E+ ++ DFG+++ + + +
Sbjct: 165 MAGEIADGMAYLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 220
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ + +M+P S LK +G+ + DV+SFGV+L E T
Sbjct: 221 KGLLPVRWMSPES-----LK--------DGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 25/217 (11%)
Query: 45 NECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKI 103
++ +LG G FG V+K + G +A K+ K + + +E V+ + H NL+++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 104 FSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAP 163
+ + + + LV+E + G L + + +Y L L+ + M + + ++H +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---- 207
Query: 164 IVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFD 220
I+H DLKP NIL D + ++ DFG+++ E + T ++AP +D
Sbjct: 208 ILHLDLKPENILCVNRDAKQI-KIIDFGLARRYKPRE---KLKVNFGTPEFLAPEVVNYD 263
Query: 221 ILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+S D++S GV+ +G P
Sbjct: 264 -------------FVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 36 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L K+ S + +V+E P G + + L F + R
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YA 148
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+++D+ +V+DFG +K + +T
Sbjct: 149 AQIVLTFEYLH----SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------GRTWX 198
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 199 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 238
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVY----KGILSDGNNVAIKVFKLQLGRAFRS---FDSECEVL 92
A E LG GSFG+VY KG++ D + + + + R F +E V+
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-----HNYFLDTLERLNIMI- 146
+ + +++++ S +++ELM G L+++L S N + L+ MI
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 147 ---DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
++ + YL+ VH DL N ++ E+ ++ DFG+++ + + +
Sbjct: 130 MAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ + +M+P S LK +G+ + DV+SFGV+L E T
Sbjct: 186 KGLLPVRWMSPES-----LK--------DGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVY----KGILSDGNNVAIKVFKLQLGRAFRS---FDSECEVL 92
A E LG GSFG+VY KG++ D + + + + R F +E V+
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-----HNYFLDTLERLNIMI- 146
+ + +++++ S +++ELM G L+++L S N + L+ MI
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 147 ---DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
++ + YL+ VH DL N ++ E+ ++ DFG+++ + + +
Sbjct: 133 MAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 188
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ + +M+P S LK +G+ + DV+SFGV+L E T
Sbjct: 189 KGLLPVRWMSPES-----LK--------DGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 46 ECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV--HHRNLLKI 103
EC +G G +G V++G G NVA+K+F R +S+ E E+ V H N+L
Sbjct: 14 EC--VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGF 67
Query: 104 FSSCSNPDFKALVLELMPN----GSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH--- 156
+S + L L+ + GSL ++L LDT+ L I++ + L +LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEI 125
Query: 157 HGHSSAP-IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS--VTQTMTMATIGYMA 213
G P I H DLK NIL+ +N ++D G++ + + V + T YMA
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
P ++ D + F S + D+++FG++L E
Sbjct: 186 P--EVLDETIQVDC-FDS----YKRVDIWAFGLVLWE 215
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVY--------KGILSDGNNVAIKVFKLQ-LGRAFRSFDSECEVLRNV-HHRN 99
LG G FG V K + VA+K+ K + SE E+++ + H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLNI------ 144
++ + +C+ +++E G+L +L YS++ E++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ +EYL +S +H DL N+L+ EN V +++DFG+++ + + + T
Sbjct: 150 TYQLARGMEYL----ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD + + + DV+SFGVL+ E FT
Sbjct: 206 GRLPVKWMAPEA-LFD------------RVYTHQSDVWSFGVLMWEIFT 241
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVY----KGILSDGNNVAIKVFKLQLGRAFRS---FDSECEVL 92
A E LG GSFG+VY KG++ D + + + + R F +E V+
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-----HNYFLDTLERLNIMI- 146
+ + +++++ S +++ELM G L+++L S N + L+ MI
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142
Query: 147 ---DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
++ + YL+ VH DL N ++ E+ ++ DFG+++ + + +
Sbjct: 143 MAGEIADGMAYLNANK----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 198
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ + +M+P S LK +G+ + DV+SFGV+L E T
Sbjct: 199 KGLLPVRWMSPES-----LK--------DGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 179
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
S +++ DLKP N+L+D+ +V+DFG +K + T T+ T Y+AP L
Sbjct: 180 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLC-GTPEYLAPEIIL- 232
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 233 -----------SKGYNKA-VDWWALGVLIYEMAAGYPP 258
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVY--------KGILSDGNNVAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G FG V K + VA+K+ K + SE E+++ + H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLNI------ 144
++ + +C+ +++E G+L +L YS++ E++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ +EYL +S +H DL N+L+ EN V +++DFG+++ + + + T
Sbjct: 155 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD + + + DV+SFGVL+ E FT
Sbjct: 211 GRLPVKWMAPEA-LFD------------RVYTHQSDVWSFGVLMWEIFT 246
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 87 SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYF-LDTLERLNIM 145
+E ++L V+ R ++ + + D LVL LM G L+ +Y +
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
++ LE LH IV+ DLKP NILLD++ R+SD G++ + +G+ T
Sbjct: 293 AEICCGLEDLHRER----IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGR 345
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T+GYMAP +++K + F D ++ G LL E G+ P
Sbjct: 346 VGTVGYMAP-----EVVKNERYTFSP--------DWWALGCLLYEMIAGQSP 384
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVY--------KGILSDGNNVAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G FG V K + VA+K+ K + SE E+++ + H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLNI------ 144
++ + +C+ +++E G+L +L YS++ E++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ +EYL +S +H DL N+L+ EN V +++DFG+++ + + + T
Sbjct: 152 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD + + + DV+SFGVL+ E FT
Sbjct: 208 GRLPVKWMAPEA-LFD------------RVYTHQSDVWSFGVLMWEIFT 243
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 46 ECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV--HHRNLLKI 103
EC +G G +G V++G G NVA+K+F R +S+ E E+ V H N+L
Sbjct: 14 EC--VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGF 67
Query: 104 FSSCSNPDFKALVLELMPN----GSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH--- 156
+S + L L+ + GSL ++L LDT+ L I++ + L +LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEI 125
Query: 157 HGHSSAP-IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS--VTQTMTMATIGYMA 213
G P I H DLK NIL+ +N ++D G++ + + V + T YMA
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
P ++ D + F S + D+++FG++L E
Sbjct: 186 P--EVLDETIQVDC-FDS----YKRVDIWAFGLVLWE 215
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 87 SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYF-LDTLERLNIM 145
+E ++L V+ R ++ + + D LVL LM G L+ +Y +
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
++ LE LH IV+ DLKP NILLD++ R+SD G++ + +G+ T
Sbjct: 293 AEICCGLEDLHRER----IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGR 345
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T+GYMAP +++K + F D ++ G LL E G+ P
Sbjct: 346 VGTVGYMAP-----EVVKNERYTFSP--------DWWALGCLLYEMIAGQSP 384
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 108/255 (42%), Gaps = 62/255 (24%)
Query: 50 LGTGSFGIVYK----GIL--SDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLLK 102
+G G+FG V++ G+L VA+K+ K + ++ F E ++ + N++K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYF-----------------------LDTL 139
+ C+ L+ E M G L +L S + L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 140 ERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLL------ 193
E+L I V + YL S VH DL N L+ ENMV +++DFG+S+ +
Sbjct: 175 EQLCIARQVAAGMAYL----SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 194 -GDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETF 252
DG D++ I +M P S ++ ++ +E DV+++GV+L E F
Sbjct: 231 KADGNDAI-------PIRWMPPESIFYN-------RYTTES------DVWAYGVVLWEIF 270
Query: 253 T-GKKPTDEMFTGEI 266
+ G +P M E+
Sbjct: 271 SYGLQPYYGMAHEEV 285
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 39/266 (14%)
Query: 21 IDLLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGIL--SDGN--NVAIKVFKL 76
+D L ++ + D+ + F +LG G FG V + L DG+ VA+K+ K
Sbjct: 2 LDSLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKA 61
Query: 77 QL--GRAFRSFDSECEVLRNVHHRNLLKIFSSCSNPDFKA------LVLELMPNGSLENW 128
+ F E ++ H ++ K+ K ++L M +G L +
Sbjct: 62 DIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAF 121
Query: 129 LYSH-------NYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMV 181
L + N L TL R M+D+ +EYL SS +H DL N +L E+M
Sbjct: 122 LLASRIGENPFNLPLQTLVRF--MVDIACGMEYL----SSRNFIHRDLAARNCMLAEDMT 175
Query: 182 ARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDV 241
V+DFG+S+ + G+ + + ++A S ++ + + DV
Sbjct: 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESL-------------ADNLYTVHSDV 222
Query: 242 YSFGVLLMETFT-GKKPTDEMFTGEI 266
++FGV + E T G+ P + EI
Sbjct: 223 WAFGVTMWEIMTRGQTPYAGIENAEI 248
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 46 ECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV--HHRNLLKI 103
EC +G G +G V++G G NVA+K+F R +S+ E E+ V H N+L
Sbjct: 43 EC--VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGF 96
Query: 104 FSSCSNPDFKALVLELMPN----GSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH--- 156
+S + L L+ + GSL ++L LDT+ L I++ + L +LH
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEI 154
Query: 157 HGHSSAP-IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS--VTQTMTMATIGYMA 213
G P I H DLK NIL+ +N ++D G++ + + V + T YMA
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
P ++ D + F S + D+++FG++L E
Sbjct: 215 P--EVLDETIQVDC-FDS----YKRVDIWAFGLVLWE 244
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 34/233 (14%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNV----AIKVFKLQL----GRAFRSFDSECEVLR 93
E F +LG G +G V++ G N A+KV K + + +E +L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
V H ++ + + L+LE + G L L F++ + ++ +AL
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALG 135
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISK-LLGDGEDSVTQTMTMATIGYM 212
+LH I++ DLKP NI+L+ +++DFG+ K + DG +VT T TI YM
Sbjct: 136 HLHQ----KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHTFC-GTIEYM 188
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGE 265
AP +IL + G + D +S G L+ + TG P FTGE
Sbjct: 189 AP-----EIL----MRSGHNRAV----DWWSLGALMYDMLTGAPP----FTGE 224
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA-TIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T +A T Y+AP L
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLAGTPEYLAPEIIL 211
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 212 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ GN+ A+K+ Q + +
Sbjct: 36 QNTAHLD------QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E P G + + L F + R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YA 148
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+++D+ +V+DFG +K + +T
Sbjct: 149 AQIVLTFEYLH----SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK------GRTWX 198
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 199 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 238
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 16/215 (7%)
Query: 48 NLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGR--AFRSFDSECEVLRNVHHRNLLKIFS 105
L+G G FG VY G VAI++ ++ ++F E R H N++
Sbjct: 39 ELIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
+C +P A++ L +L + + LD + I ++ + YLH + I+
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH----AKGIL 152
Query: 166 HCDLKPSNILLDENMVARVSDFG---ISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
H DLK N+ D V ++DFG IS +L G + + ++AP ++ L
Sbjct: 153 HKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAP--EIIRQL 209
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
P + + S DV++ G + E + P
Sbjct: 210 SPDTEE--DKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 100/232 (43%), Gaps = 33/232 (14%)
Query: 35 LDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKVFKLQLGRAFRSFDSECEVLR 93
L I+ E F +LG GSFG V+ N AIK K + D EC ++
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV--VLMDDDVECTMVE 67
Query: 94 NV------HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
H L +F + + V+E + G L + S + F D +
Sbjct: 68 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF-DLSRATFYAAE 126
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISK--LLGDGEDSVTQTMT 205
+ L L++LH S IV+ DLK NILLD++ +++DFG+ K +LGD +
Sbjct: 127 IILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK----TNXF 178
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
T Y+AP +IL G + + D +SFGVLL E G+ P
Sbjct: 179 CGTPDYIAP-----EIL------LGQK--YNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 33/230 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVY----KGILSDGNNVAIKVFKLQLGRAFR---SFDSECEVL 92
A E LG GSFG+VY KG++ D + + + + R F +E V+
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS-----HNYFLDTLERLNIMI- 146
+ + +++++ S +++ELM G L+++L S N + L+ MI
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 147 ---DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
++ + YL+ VH DL N + E+ ++ DFG+++ + + +
Sbjct: 130 MAGEIADGMAYLNANK----FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ + +M+P S LK +G+ + DV+SFGV+L E T
Sbjct: 186 KGLLPVRWMSPES-----LK--------DGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 115/239 (48%), Gaps = 32/239 (13%)
Query: 50 LGTGSFGIV-YKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G GS GIV + S G VA+K L+ + +E ++R+ H N++++++S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
D +V+E + G+L + + +H ++ + + + V AL LH + ++H D
Sbjct: 88 VGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRD 141
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP--VSQLFDILKPKN 226
+K +ILL + ++SDFG + ++ + + T +MAP +S+L
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRL-------- 191
Query: 227 AKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK--NWVNESLPHALTDV 283
+G E D++S G++++E G+ P + E LK + ++LP L ++
Sbjct: 192 -PYGPE------VDIWSLGIMVIEMVDGEPP----YFNEPPLKAMKMIRDNLPPRLKNL 239
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 87 SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMI 146
E VL+ + H N++K++ + LV+E G L + + H + ++ I+
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEII-HRMKFNEVDAAVIIK 143
Query: 147 DVWLALEYLHHGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQT 203
V + YLH + IVH DLKP N+LL +++ + ++ DFG+S + E+
Sbjct: 144 QVLSGVTYLHKHN----IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMK 196
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP ++L+ K KCDV+S GV+L G P
Sbjct: 197 ERLGTAYYIAP-----EVLRKK---------YDEKCDVWSIGVILFILLAGYPP 236
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 115/239 (48%), Gaps = 32/239 (13%)
Query: 50 LGTGSFGIV-YKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G GS GIV + S G VA+K L+ + +E ++R+ H N++++++S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
D +V+E + G+L + + +H ++ + + + V AL LH + ++H D
Sbjct: 97 VGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRD 150
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP--VSQLFDILKPKN 226
+K +ILL + ++SDFG + ++ + + T +MAP +S+L
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRL-------- 200
Query: 227 AKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK--NWVNESLPHALTDV 283
+G E D++S G++++E G+ P + E LK + ++LP L ++
Sbjct: 201 -PYGPE------VDIWSLGIMVIEMVDGEPP----YFNEPPLKAMKMIRDNLPPRLKNL 248
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV--HHRNLLKIFSSC 107
+G G FG V++G G VA+K+F R RS+ E E+ + V H N+L F +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIAA 65
Query: 108 SNPDFKA-----LVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHH---G 158
N D LV + +GSL ++L N + T+E + + + L +LH G
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 159 HSSAP-IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA------TIGY 211
P I H DLK NIL+ +N ++D G L DS T T+ +A T Y
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
MAP L D + K+ F S + D+Y+ G++ E
Sbjct: 179 MAP-EVLDDSINMKH--FES----FKRADIYAMGLVFWE 210
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 35 LDIQRATEGFNECNLLGTGSFG--IVYKGILSDGNNVAIKVFK---LQLGRAFRSFDSEC 89
L Q ++ + LG+G++G ++ K L+ G AIK+ K + + E
Sbjct: 14 LYFQGLSDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEV 72
Query: 90 EVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVW 149
VL+ + H N++K++ + LV+E+ G L + + F + ++ IM V
Sbjct: 73 AVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE-VDAAVIMKQVL 131
Query: 150 LALEYLHHGHSSAPIVHCDLKPSNILLD---ENMVARVSDFGISKLLGDGEDSVTQTMTM 206
YLH + IVH DLKP N+LL+ + + ++ DFG+S E +
Sbjct: 132 SGTTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERL 184
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
T Y+AP ++L+ K KCDV+S GV+L G P
Sbjct: 185 GTAYYIAP-----EVLRKK---------YDEKCDVWSCGVILYILLCGYPP 221
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 23/198 (11%)
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
E + R++ H++++ + DF +VLEL SL L+ L E +
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 123
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGI-SKLLGDGEDSVTQTMTM 206
+ L +YLH ++H DLK N+ L+E++ ++ DFG+ +K+ DGE + +
Sbjct: 124 IVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLC 176
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI 266
T Y+AP ++L K F + DV+S G ++ GK P + E
Sbjct: 177 GTPNYIAP-----EVLSKKGHSF--------EVDVWSIGCIMYTLLVGKPPFETSCLKET 223
Query: 267 SLKNWVNE-SLPHALTDV 283
L+ NE S+P + V
Sbjct: 224 YLRIKKNEYSIPKHINPV 241
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 115/239 (48%), Gaps = 32/239 (13%)
Query: 50 LGTGSFGIV-YKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G GS GIV + S G VA+K L+ + +E ++R+ H N++++++S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
D +V+E + G+L + + +H ++ + + + V AL LH + ++H D
Sbjct: 92 VGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRD 145
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP--VSQLFDILKPKN 226
+K +ILL + ++SDFG + ++ + + T +MAP +S+L
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRL-------- 195
Query: 227 AKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK--NWVNESLPHALTDV 283
+G E D++S G++++E G+ P + E LK + ++LP L ++
Sbjct: 196 -PYGPE------VDIWSLGIMVIEMVDGEPP----YFNEPPLKAMKMIRDNLPPRLKNL 243
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 43/238 (18%)
Query: 39 RATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHH 97
R F E +LG G+FG V K + D AIK + + SE +L +++H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNH 61
Query: 98 -------------RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI 144
RN +K ++ + E N +L + ++S N E +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGED------ 198
+ AL Y+H S I+H +LKP NI +DE+ ++ DFG++K + D
Sbjct: 122 FRQILEALSYIH----SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 199 ------SVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
S T + T Y+A +++ D G + K D YS G++ E
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVA--TEVLD----------GTGHYNEKIDXYSLGIIFFE 223
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 115/239 (48%), Gaps = 32/239 (13%)
Query: 50 LGTGSFGIV-YKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G GS GIV + S G VA+K L+ + +E ++R+ H N++++++S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
D +V+E + G+L + + +H ++ + + + V AL LH + ++H D
Sbjct: 99 VGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRD 152
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP--VSQLFDILKPKN 226
+K +ILL + ++SDFG + ++ + + T +MAP +S+L
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRL-------- 202
Query: 227 AKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK--NWVNESLPHALTDV 283
+G E D++S G++++E G+ P + E LK + ++LP L ++
Sbjct: 203 -PYGPE------VDIWSLGIMVIEMVDGEPP----YFNEPPLKAMKMIRDNLPPRLKNL 250
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV--HHRNLLKIFSSC 107
+G G FG V++G G VA+K+F R RS+ E E+ + V H N+L F +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIAA 68
Query: 108 SNPDFKA-----LVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHH---G 158
N D LV + +GSL ++L N + T+E + + + L +LH G
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 159 HSSAP-IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA------TIGY 211
P I H DLK NIL+ +N ++D G L DS T T+ +A T Y
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
MAP L D + K+ F S + D+Y+ G++ E
Sbjct: 182 MAP-EVLDDSINMKH--FES----FKRADIYAMGLVFWE 213
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV--HHRNLLKIFSSC 107
+G G FG V++G G VA+K+F R RS+ E E+ + V H N+L F +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIAA 66
Query: 108 SNPDFKA-----LVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHH---G 158
N D LV + +GSL ++L N + T+E + + + L +LH G
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 123
Query: 159 HSSAP-IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA------TIGY 211
P I H DLK NIL+ +N ++D G L DS T T+ +A T Y
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
MAP L D + K+ F S + D+Y+ G++ E
Sbjct: 180 MAP-EVLDDSINMKH--FES----FKRADIYAMGLVFWE 211
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 31/249 (12%)
Query: 50 LGTGSFGIVYKGILSDGNN-VAIKV-FKLQLGR--AFRSFDSECEVLRNVHHRNLLKIFS 105
LG G FG VY + VA+KV FK Q+ + E E+ ++HH N+L++++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
+ L+LE P G L L F D IM ++ AL Y H ++
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSCTF-DEQRTATIMEELADALMYCH----GKKVI 145
Query: 166 HCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPK 225
H D+KP N+LL +++DFG S S+ + T+ Y+ P ++++ +
Sbjct: 146 HRDIKPENLLLGLKGELKIADFGWSV----HAPSLRRKTMCGTLDYLPP-----EMIEGR 196
Query: 226 NAKFGSEGIISAKCDVYSFGVLLMETFTGKKP-----TDEMFTGEISLKNWVNESLPHAL 280
+ + K D++ GVL E G P +E + + + S+P
Sbjct: 197 --------MHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGA 248
Query: 281 TDVVDANLR 289
D++ LR
Sbjct: 249 QDLISKLLR 257
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 48 NLLGTGSFGIVYKGILSDGNNV--AIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFS 105
N +G GS+G V K + G + A K F E E+++++ H N+++++
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
+ + LV+EL G L + F ++ + IM DV A+ Y H + +
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVHKRVFRES-DAARIMKDVLSAVAYCHKLN----VA 128
Query: 166 HCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
H DLKP N L + ++ DFG++ G+ T+ + T Y++P Q+
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSP--QVL--- 180
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
EG+ +CD +S GV++ G P E+ LK
Sbjct: 181 ---------EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLK 218
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G G+ G VY + ++ G VAI+ LQ +E V+R + N++ S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
D +V+E + GSL + + +D + + + ALE+LH S ++H D
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRD 141
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
+K NILL + +++DFG + E S TM + T +MAP +
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTM-VGTPYWMAP-------------E 186
Query: 229 FGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ K D++S G++ +E G+ P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
SS +H DL NILL EN V ++ DFG+++ + D V + T + +MAP S +F
Sbjct: 216 SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPES-IF 274
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
D I S K DV+S+GVLL E F+
Sbjct: 275 D------------KIYSTKSDVWSYGVLLWEIFS 296
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV--HHRNLLKIFSSC 107
+G G FG V++G G VA+K+F R RS+ E E+ + V H N+L F +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIAA 71
Query: 108 SNPDFKA-----LVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHH---G 158
N D LV + +GSL ++L N + T+E + + + L +LH G
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 159 HSSAP-IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA------TIGY 211
P I H DLK NIL+ +N ++D G L DS T T+ +A T Y
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
MAP L D + K+ F S + D+Y+ G++ E
Sbjct: 185 MAP-EVLDDSINMKH--FES----FKRADIYAMGLVFWE 216
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 50 LGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G+FG VYK + G A KV + + + E E+L H ++K+ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+ +++E P G+++ + + L + + + AL +LH S I+H D
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH----SKRIIHRD 134
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
LK N+L+ R++DFG+S + + + + T +MAP + + +K
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 229 FGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
+ K D++S G+ L+E + P E+ + LK
Sbjct: 193 Y--------KADIWSLGITLIEMAQIEPPHHELNPMRVLLK 225
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV--HHRNLLKIFSSC 107
+G G FG V++G G VA+K+F R RS+ E E+ + V H N+L F +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIAA 91
Query: 108 SNPDFKA-----LVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHH---G 158
N D LV + +GSL ++L N + T+E + + + L +LH G
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 159 HSSAP-IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA------TIGY 211
P I H DLK NIL+ +N ++D G L DS T T+ +A T Y
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
MAP L D + K+ F S + D+Y+ G++ E
Sbjct: 205 MAP-EVLDDSINMKH--FES----FKRADIYAMGLVFWE 236
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ GN+ A+K+ Q + +
Sbjct: 36 QNTAHLD------QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT 89
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E + + V+ L+K+ S + +VLE P G + + L F + R
Sbjct: 90 LNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YA 148
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 149 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK------GRTWX 198
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 199 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 238
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
E + R++ H++++ + DF +VLEL SL L+ L E +
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 129
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGI-SKLLGDGEDSVTQTMTM 206
+ L +YLH ++H DLK N+ L+E++ ++ DFG+ +K+ DGE T
Sbjct: 130 IVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LC 182
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI 266
T Y+AP ++L K F + DV+S G ++ GK P + E
Sbjct: 183 GTPNYIAP-----EVLSKKGHSF--------EVDVWSIGCIMYTLLVGKPPFETSCLKET 229
Query: 267 SLKNWVNE-SLPHALTDVV 284
L+ NE S+P + V
Sbjct: 230 YLRIKKNEYSIPKHINPVA 248
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
E + R++ H++++ + DF +VLEL SL L+ L E +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 125
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGI-SKLLGDGEDSVTQTMTM 206
+ L +YLH ++H DLK N+ L+E++ ++ DFG+ +K+ DGE T
Sbjct: 126 IVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LC 178
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI 266
T Y+AP ++L K F + DV+S G ++ GK P + E
Sbjct: 179 GTPNYIAP-----EVLSKKGHSF--------EVDVWSIGCIMYTLLVGKPPFETSCLKET 225
Query: 267 SLKNWVNE-SLPHALTDVV 284
L+ NE S+P + V
Sbjct: 226 YLRIKKNEYSIPKHINPVA 244
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
E + R++ H++++ + DF +VLEL SL L+ L E +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 125
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGI-SKLLGDGEDSVTQTMTM 206
+ L +YLH ++H DLK N+ L+E++ ++ DFG+ +K+ DGE T
Sbjct: 126 IVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LC 178
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI 266
T Y+AP ++L K F + DV+S G ++ GK P + E
Sbjct: 179 GTPNYIAP-----EVLSKKGHSF--------EVDVWSIGCIMYTLLVGKPPFETSCLKET 225
Query: 267 SLKNWVNE-SLPHALTDVV 284
L+ NE S+P + V
Sbjct: 226 YLRIKKNEYSIPKHINPVA 244
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 45/226 (19%)
Query: 46 ECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV--HHRNLLKI 103
EC +G G +G V++G L G +VA+K+F R +S+ E E+ V H N+L
Sbjct: 14 EC--VGKGRYGEVWRG-LWHGESVAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 104 FSSCSNPDFKALVLELMPNGSLENWL----YSHNYFLDTLER--------LNIMIDVWLA 151
+S D + N S + WL + H D L+R L + +
Sbjct: 68 IAS----DMTSR------NSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACG 117
Query: 152 LEYLH---HGHSSAP-IVHCDLKPSNILLDENMVARVSDFGISKLLGDGED--SVTQTMT 205
L +LH G P I H D K N+L+ N+ ++D G++ + G D +
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR 177
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAK-CDVYSFGVLLME 250
+ T YMAP ++L + + ++ S K D+++FG++L E
Sbjct: 178 VGTKRYMAP-----EVL---DEQIRTDCFESYKWTDIWAFGLVLWE 215
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 145
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+DE +V+DFG +K + +T + T Y+AP L
Sbjct: 146 -SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 198
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 199 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 224
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 23/225 (10%)
Query: 50 LGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G+FG VYK + G A KV + + + E E+L H ++K+ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+ +++E P G+++ + + L + + + AL +LH S I+H D
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH----SKRIIHRD 142
Query: 169 LKPSNILLDENMVARVSDFGIS----KLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKP 224
LK N+L+ R++DFG+S K L DS + T +MAP + + +K
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSAKNLKTL-QKRDSF-----IGTPYWMAPEVVMCETMKD 196
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
+ K D++S G+ L+E + P E+ + LK
Sbjct: 197 TPYDY--------KADIWSLGITLIEMAQIEPPHHELNPMRVLLK 233
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 40/263 (15%)
Query: 53 GSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLR--NVHHRNLLKIFSS---C 107
G FG V+K L + + VA+K+F LQ +S+ SE E+ + H NLL+ ++
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQ---DKQSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 108 SNPDFKA-LVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH--------G 158
SN + + L+ GSL ++L + + L ++ + L YLH G
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGNIITWNEL--CHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 159 HSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
H + I H D K N+LL ++ A ++DFG++ G+ + T YMAP
Sbjct: 140 HKPS-IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP---- 194
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKK----PTDEM---FTGEISLKNW 271
++L+ F + + + D+Y+ G++L E + K P DE F EI
Sbjct: 195 -EVLE-GAINFQRDAFL--RIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIG---- 246
Query: 272 VNESLPHALTDVVDANLRVSMKD 294
+ SL VV +R ++KD
Sbjct: 247 QHPSLEELQEVVVHKKMRPTIKD 269
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 48 NLLGTGSFGIVYKGILSDGNNV--AIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFS 105
N +G GS+G V K + G + A K F E E+++++ H N+++++
Sbjct: 32 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
+ + LV+EL G L + F ++ + IM DV A+ Y H + +
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHKRVFRES-DAARIMKDVLSAVAYCHKLN----VA 145
Query: 166 HCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
H DLKP N L + ++ DFG++ G+ T+ + T Y++P +L
Sbjct: 146 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSP-----QVL 197
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
EG+ +CD +S GV++ G P E+ LK
Sbjct: 198 ---------EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLK 235
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV--HHRNLLKIFSSC 107
+G G FG V++G G VA+K+F R RS+ E E+ + V H N+L F +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG-FIAA 104
Query: 108 SNPDFKA-----LVLELMPNGSLENWLYSHNYFLDTLERL-NIMIDVWLALEYLHH---G 158
N D LV + +GSL ++L N + T+E + + + L +LH G
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 159 HSSAP-IVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA------TIGY 211
P I H DLK NIL+ +N ++D G L DS T T+ +A T Y
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
MAP L D + K+ F S + D+Y+ G++ E
Sbjct: 218 MAP-EVLDDSINMKH--FES----FKRADIYAMGLVFWE 249
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 33/217 (15%)
Query: 50 LGTGSFGIVYKGILSD------GNNVAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+VY+G D VA+K R F +E V++ ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDT---------LERLNIMIDVWLALE 153
+ S +V+ELM +G L+++L S + E + + ++ +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
YL+ + VH DL N ++ + ++ DFG+++ + + + + + +MA
Sbjct: 142 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
P S LK +G+ + D++SFGV+L E
Sbjct: 198 PES-----LK--------DGVFTTSSDMWSFGVVLWE 221
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQL--GRAFRSFDSECEVLRNVHHRNLLKIFSS 106
LG G+F +V + + + G A K+ + R + + E + R + H N++++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
S F LV +L+ G L + + Y+ + + + LE ++H H + IVH
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIQQILESVNHCHLNG-IVH 126
Query: 167 CDLKPSNILL---DENMVARVSDFGIS-KLLGDGEDSVTQTMTMATIGYMAP 214
DLKP N+LL + +++DFG++ ++ GD + T GY++P
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG---FAGTPGYLSP 175
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 44 FNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLL 101
F + + LG G+ G+V+K G +A K+ L++ A R+ E +VL + ++
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
+ + + ++ +E M GSL+ L + + + I V L YL H
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKHK- 128
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
I+H D+KPSNIL++ ++ DFG+S L D + T YM+P +
Sbjct: 129 --IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EMANEFVGTRSYMSP-----ER 177
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNESLP 277
L+ + S + D++S G+ L+E G+ P M E+ L VNE P
Sbjct: 178 LQGTH--------YSVQSDIWSMGLSLVEMAVGRYPRPPMAIFEL-LDYIVNEPPP 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 33/217 (15%)
Query: 50 LGTGSFGIVYKGILSD------GNNVAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+VY+G D VA+K R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDT---------LERLNIMIDVWLALE 153
+ S +V+ELM +G L+++L S + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
YL+ + VH DL N ++ + ++ DFG+++ + + + + + +MA
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
P S LK +G+ + D++SFGV+L E
Sbjct: 201 PES-----LK--------DGVFTTSSDMWSFGVVLWE 224
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 35/233 (15%)
Query: 30 RRTSYLDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD-- 86
+ T++LD F LGTGSFG ++ + GN+ A+K+ Q + +
Sbjct: 35 QNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT 88
Query: 87 -SECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIM 145
+E +L+ V+ L+K+ S + +V+E + G + + L F + R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YA 147
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L EYLH S +++ DLKP N+L+D+ +V+DFG +K + +T
Sbjct: 148 AQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWX 197
Query: 206 M-ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T Y+AP L S+G A D ++ GVL+ E G P
Sbjct: 198 LCGTPEYLAPEIIL------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 23/199 (11%)
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
E + R++ H++++ + DF +VLEL SL L+ L E +
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 147
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGI-SKLLGDGEDSVTQTMTM 206
+ L +YLH ++H DLK N+ L+E++ ++ DFG+ +K+ DGE + +
Sbjct: 148 IVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLC 200
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI 266
T Y+AP ++L K F + DV+S G ++ GK P + E
Sbjct: 201 GTPNYIAP-----EVLSKKGHSF--------EVDVWSIGCIMYTLLVGKPPFETSCLKET 247
Query: 267 SLKNWVNE-SLPHALTDVV 284
L+ NE S+P + V
Sbjct: 248 YLRIKKNEYSIPKHINPVA 266
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQL--GRAFRSFDSECEVLRNVHHRNLLKIFSS 106
LG G+F +V + + + G A K+ + R + + E + R + H N++++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
S F LV +L+ G L + + Y+ + I LE ++H H + IVH
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ----QILESVNHCHLNG-IVH 126
Query: 167 CDLKPSNILL---DENMVARVSDFGIS-KLLGDGEDSVTQTMTMATIGYMAP 214
DLKP N+LL + +++DFG++ ++ GD + T GY++P
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG---FAGTPGYLSP 175
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPAIIL 211
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 212 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQL--GRAFRSFDSECEVLRNVHHRNLLKIFSS 106
+G G+F +V + + L G+ A K+ + R + + E + R + H N++++ S
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
S F LV +L+ G L + + Y+ + I LE + H H +VH
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ----QILEAVLHCHQMG-VVH 126
Query: 167 CDLKPSNILLD---ENMVARVSDFGIS-KLLGDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
DLKP N+LL + +++DFG++ ++ GD + T GY++P ++L
Sbjct: 127 RDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG---FAGTPGYLSP-----EVL 178
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ + +G D+++ GV+L G P
Sbjct: 179 RKE--AYGK------PVDIWACGVILYILLVGYPP 205
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 39 RATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDSECEVLRNV-- 95
R T F+E +G+G FG V+K + DG AIK K L + ++ EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 96 -HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNY----FLDTLERLNIMIDVWL 150
H ++++ FS+ + D + E GSL + + S NY + E ++++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 124
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIG 210
L Y+H S +VH D+KPSNI ++R S + GD ED M IG
Sbjct: 125 GLRYIH----SMSLVHMDIKPSNIF-----ISRTSIPNAASEEGD-EDDWASNKVMFKIG 174
Query: 211 YMAPVSQL 218
+ V+++
Sbjct: 175 DLGHVTRI 182
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 115/239 (48%), Gaps = 32/239 (13%)
Query: 50 LGTGSFGIV-YKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G GS GIV + S G VA+K L+ + +E ++R+ H N++++++S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
D +V+E + G+L + + +H ++ + + + V AL LH + ++H D
Sbjct: 142 VGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRD 195
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP--VSQLFDILKPKN 226
+K +ILL + ++SDFG + ++ + + T +MAP +S+L
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRL-------- 245
Query: 227 AKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK--NWVNESLPHALTDV 283
+G E D++S G++++E G+ P + E LK + ++LP L ++
Sbjct: 246 -PYGPE------VDIWSLGIMVIEMVDGEPP----YFNEPPLKAMKMIRDNLPPRLKNL 293
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 39 RATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDSECEVLRNV-- 95
R T F+E +G+G FG V+K + DG AIK K L + ++ EV +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 96 -HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNY----FLDTLERLNIMIDVWL 150
H ++++ FS+ + D + E GSL + + S NY + E ++++ V
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 126
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIG 210
L Y+H S +VH D+KPSNI ++R S + GD ED M IG
Sbjct: 127 GLRYIH----SMSLVHMDIKPSNIF-----ISRTSIPNAASEEGD-EDDWASNKVMFKIG 176
Query: 211 YMAPVSQL 218
+ V+++
Sbjct: 177 DLGHVTRI 184
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 23/199 (11%)
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
E + R++ H++++ + DF +VLEL SL L+ L E +
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 149
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGI-SKLLGDGEDSVTQTMTM 206
+ L +YLH ++H DLK N+ L+E++ ++ DFG+ +K+ DGE + +
Sbjct: 150 IVLGCQYLHRNR----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLC 202
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEI 266
T Y+AP ++L K F + DV+S G ++ GK P + E
Sbjct: 203 GTPNYIAP-----EVLSKKGHSF--------EVDVWSIGCIMYTLLVGKPPFETSCLKET 249
Query: 267 SLKNWVNE-SLPHALTDVV 284
L+ NE S+P + V
Sbjct: 250 YLRIKKNEYSIPKHINPVA 268
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 153
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 154 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 206
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 207 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 232
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 33/217 (15%)
Query: 50 LGTGSFGIVYKGILSD------GNNVAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+VY+G D VA+K R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDT---------LERLNIMIDVWLALE 153
+ S +V+ELM +G L+++L S + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
YL+ + VH DL N ++ + ++ DFG+++ + + + + + +MA
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
P S LK +G+ + D++SFGV+L E
Sbjct: 201 PES-----LK--------DGVFTTSSDMWSFGVVLWE 224
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 211
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 212 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRS----FDSECEVLRNVHHRNLLKIF 104
+GTGS+G K SDG + K +L G + SE +LR + H N+++ +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 105 SSCSNPDFKAL--VLELMPNGSLENWLYS---HNYFLDTLERLNIMIDVWLALEYLHH-- 157
+ L V+E G L + + +LD L +M + LAL+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 158 --GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
GH+ ++H DLKP+N+ LD ++ DFG++++L ED + + T YM+P
Sbjct: 132 DGGHT---VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE--FVGTPYYMSPE 186
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
+ + K D++S G LL E
Sbjct: 187 QM-------------NRMSYNEKSDIWSLGCLLYE 208
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 39 RATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDSECEVLRNV-- 95
R T F+E +G+G FG V+K + DG AIK K L + ++ EV +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 96 -HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNY----FLDTLERLNIMIDVWL 150
H ++++ FS+ + D + E GSL + + S NY + E ++++ V
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 122
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIG 210
L Y+H S +VH D+KPSNI ++R S + GD ED M IG
Sbjct: 123 GLRYIH----SMSLVHMDIKPSNIF-----ISRTSIPNAASEEGD-EDDWASNKVMFKIG 172
Query: 211 YMAPVSQL 218
+ V+++
Sbjct: 173 DLGHVTRI 180
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVY--------KGILSDGNNVAIKVFKLQ-LGRAFRSFDSECEVLRNV-HHRN 99
LG G+FG V K + VA+K+ K + SE E+++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLNI------ 144
++ + +C+ +++ G+L +L YS++ E++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ +EYL +S +H DL N+L+ EN V +++DFG+++ + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD + + + DV+SFGVL+ E FT
Sbjct: 219 GRLPVKWMAPEA-LFD------------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 39 RATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDSECEVLRNV-- 95
R T F+E +G+G FG V+K + DG AIK K L + ++ EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 96 -HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNY----FLDTLERLNIMIDVWL 150
H ++++ FS+ + D + E GSL + + S NY + E ++++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 124
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIG 210
L Y+H S +VH D+KPSNI ++R S + GD ED M IG
Sbjct: 125 GLRYIH----SMSLVHMDIKPSNIF-----ISRTSIPNAASEEGD-EDDWASNKVMFKIG 174
Query: 211 YMAPVSQL 218
+ V+++
Sbjct: 175 DLGHVTRI 182
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 211
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 212 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 23/179 (12%)
Query: 50 LGTGSFGIVYKGILS-DGNNVAIK----VFKLQLGRAFRSFDSECEVLRNVHHRNLLKI- 103
+G G++G+V G VAIK F + + A R+ E ++L++ H N++ I
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTL-RELKILKHFKHDNIIAIK 119
Query: 104 ---FSSCSNPDFKAL--VLELMPNGSLENWLYSHNYFLDTLERLN-IMIDVWLALEYLHH 157
+ +FK++ VL+LM L ++S TLE + + + L+Y+H
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPL--TLEHVRYFLYQLLRGLKYMH- 175
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLL--GDGEDSVTQTMTMATIGYMAP 214
SA ++H DLKPSN+L++EN ++ DFG+++ L E T +AT Y AP
Sbjct: 176 ---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 211
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 212 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 115/239 (48%), Gaps = 32/239 (13%)
Query: 50 LGTGSFGIV-YKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G GS GIV + S G VA+K L+ + +E ++R+ H N++++++S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
D +V+E + G+L + + +H ++ + + + V AL LH + ++H D
Sbjct: 219 VGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIAAVCLAVLQALSVLH----AQGVIHRD 272
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP--VSQLFDILKPKN 226
+K +ILL + ++SDFG + ++ + + T +MAP +S+L
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISRL-------- 322
Query: 227 AKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK--NWVNESLPHALTDV 283
+G E D++S G++++E G+ P + E LK + ++LP L ++
Sbjct: 323 -PYGPE------VDIWSLGIMVIEMVDGEPP----YFNEPPLKAMKMIRDNLPPRLKNL 370
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 179
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 180 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 232
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 233 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 258
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 211
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 212 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
L H HS ++H D+KPSN+L++ ++ DFGIS L D V + + YMAP
Sbjct: 122 LEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL---VDDVAKDIDAGCKPYMAP 178
Query: 215 VSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNE 274
+ N + +G S K D++S G+ ++E + P D T LK V E
Sbjct: 179 --------ERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 229
Query: 275 SLPHALTDVVDANL 288
P D A
Sbjct: 230 PSPQLPADKFSAEF 243
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 40/251 (15%)
Query: 42 EGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV----- 95
+ F +LG GSFG ++ + G+ A+KV K + + D EC +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV--ILQDDDVECTMTEKRILSLA 80
Query: 96 -HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
+H L ++F PD V+E + G L + F + R ++ AL +
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMF 139
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG-EDSVTQTMTMATIGYMA 213
LH I++ DLK N+LLD +++DFG+ K +G + VT T Y+A
Sbjct: 140 LH----DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYIA 192
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP-----TDEMFTG---- 264
P +IL+ E + D ++ GVLL E G P D++F
Sbjct: 193 P-----EILQ--------EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 239
Query: 265 EISLKNWVNES 275
E+ W++E
Sbjct: 240 EVVYPTWLHED 250
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 23/179 (12%)
Query: 50 LGTGSFGIVYKGILS-DGNNVAIK----VFKLQLGRAFRSFDSECEVLRNVHHRNLLKI- 103
+G G++G+V G VAIK F + + A R+ E ++L++ H N++ I
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTL-RELKILKHFKHDNIIAIK 120
Query: 104 ---FSSCSNPDFKAL--VLELMPNGSLENWLYSHNYFLDTLERLN-IMIDVWLALEYLHH 157
+ +FK++ VL+LM L ++S TLE + + + L+Y+H
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPL--TLEHVRYFLYQLLRGLKYMH- 176
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLL--GDGEDSVTQTMTMATIGYMAP 214
SA ++H DLKPSN+L++EN ++ DFG+++ L E T +AT Y AP
Sbjct: 177 ---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIG 210
AL YL H ++H D+KPSNILLDE ++ DFGIS L D + +
Sbjct: 136 ALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRL---VDDKAKDRSAGCAA 189
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
YMAP + D P + + DV+S G+ L+E TG+ P
Sbjct: 190 YMAP--ERIDPPDPTKPDY------DIRADVWSLGISLVELATGQFP 228
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 31/225 (13%)
Query: 41 TEGFNECNLLGTGSFGIVY--KGILSDGNNVAIKVFK---LQLGRAFRSFDSECEVLRNV 95
++ + LG+G++G V K L+ G AIK+ K + + E VL+ +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 96 HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
H N++K++ + LV+E+ G L + + F + ++ IM V YL
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE-VDAAVIMKQVLSGTTYL 120
Query: 156 HHGHSSAPIVHCDLKPSNILLD---ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
H + IVH DLKP N+LL+ + + ++ DFG+S E + T Y+
Sbjct: 121 HKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYI 173
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
AP ++L+ K KCDV+S GV+L G P
Sbjct: 174 AP-----EVLRKK---------YDEKCDVWSCGVILYILLCGYPP 204
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 42/229 (18%)
Query: 50 LGTGSFGIVY--------KGILSDGNNVAIKVFKLQLG-RAFRSFDSECEVLRNV-HHRN 99
LG G+FG V K + VA+K+ K + SE E+++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERLNI------ 144
++ + +C+ +++ G+L +L YS++ E++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ +EYL +S +H DL N+L+ EN V +++DFG+++ + + + T
Sbjct: 163 TYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP + LFD + + + DV+SFGVL+ E FT
Sbjct: 219 GRLPVKWMAPEA-LFD------------RVYTHQSDVWSFGVLMWEIFT 254
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLXGTPEYLAPEIIL 211
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 212 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 211
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 212 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 211
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 212 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 211
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 212 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 211
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 212 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 211
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 212 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 160 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 212
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ E G P
Sbjct: 213 ------------SKGYNKA-VDWWALGVLIYEMAAGYPP 238
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 50 LGTGSFGIVY--KGILSDGNNVAIKVF-KLQL-GRAFRSFDSECEVLRNVHHRNLLKIFS 105
+G G+F V + IL+ G VA+K+ K QL + + E + + ++H N++K+F
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIV 165
LV E G + ++L +H + R + A++Y H IV
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF----IV 135
Query: 166 HCDLKPSNILLDENMVARVSDFGISK--LLGDGEDSVTQTMTMATIGYMAPVSQLFDILK 223
H DLK N+LLD + +++DFG S G+ D+ Y AP +LF
Sbjct: 136 HRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFC-----GAPPYAAP--ELF---- 184
Query: 224 PKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
+ K+ + DV+S GV+L +G P D
Sbjct: 185 -QGKKYD-----GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G G+ G VY + ++ G VAI+ LQ +E V+R + N++ S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
D +V+E + GSL + + +D + + + ALE+LH S ++H D
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRD 142
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
+K NILL + +++DFG + + ++ + T +MAP +
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSXMVGTPYWMAP-------------E 187
Query: 229 FGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ K D++S G++ +E G+ P
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 38/279 (13%)
Query: 36 DIQRATEGFNEC-----------NLLGTGSFGIVYKGILSDGNNVAIKVFKLQLG--RAF 82
D +A+ NEC +G+G V++ + AIK L+ +
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 98
Query: 83 RSFDSECEVLRNV--HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLE 140
S+ +E L + H +++++ + +V+E N L +WL +D E
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKK-SIDPWE 156
Query: 141 RLNIMIDVWLALEYLH-HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS 199
R + ++ A+ +H HG IVH DLKP+N L+ + M+ ++ DFGI+ + S
Sbjct: 157 RKSYWKNMLEAVHTIHQHG-----IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTS 210
Query: 200 VTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
V + + T+ YM P + + S+ IS K DV+S G +L GK P
Sbjct: 211 VVKDSQVGTVNYMPP--EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
Query: 260 EMFTGEISLKNWVNESLPHALTDVVDANLRVSMKDVAAK 298
++ +IS L ++D N + D+ K
Sbjct: 269 QIIN-QIS-----------KLHAIIDPNHEIEFPDIPEK 295
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G G+ G VY + ++ G VAI+ LQ +E V+R + N++ S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
D +V+E + GSL + + +D + + + ALE+LH S ++H D
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRD 141
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
+K NILL + +++DFG + + ++ + T +MAP +
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSXMVGTPYWMAP-------------E 186
Query: 229 FGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ K D++S G++ +E G+ P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNV----AIKVFKLQL----GRAFRSFDSECEVLR 93
E F +LG G +G V++ G N A+KV K + + +E +L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 94 NVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
V H ++ + + L+LE + G L L F++ + ++ +AL
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALG 135
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISK-LLGDGEDSVTQTMTMATIGYM 212
+LH I++ DLKP NI+L+ +++DFG+ K + DG +VT TI YM
Sbjct: 136 HLHQ----KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHXFC-GTIEYM 188
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGE 265
AP +IL + G + D +S G L+ + TG P FTGE
Sbjct: 189 AP-----EIL----MRSGHNRAV----DWWSLGALMYDMLTGAPP----FTGE 224
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G G+ G VY + ++ G VAI+ LQ +E V+R + N++ S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
D +V+E + GSL + + +D + + + ALE+LH S ++H +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRN 142
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
+K NILL + +++DFG + E S TM + T +MAP +
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTM-VGTPYWMAP-------------E 187
Query: 229 FGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ K D++S G++ +E G+ P
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 38/279 (13%)
Query: 36 DIQRATEGFNEC-----------NLLGTGSFGIVYKGILSDGNNVAIKVFKLQLG--RAF 82
D +A+ NEC +G+G V++ + AIK L+ +
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 98
Query: 83 RSFDSECEVLRNV--HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLE 140
S+ +E L + H +++++ + +V+E N L +WL +D E
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKK-SIDPWE 156
Query: 141 RLNIMIDVWLALEYLH-HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS 199
R + ++ A+ +H HG IVH DLKP+N L+ + M+ ++ DFGI+ + S
Sbjct: 157 RKSYWKNMLEAVHTIHQHG-----IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTS 210
Query: 200 VTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
V + + T+ YM P + + S+ IS K DV+S G +L GK P
Sbjct: 211 VVKDSQVGTVNYMPP--EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
Query: 260 EMFTGEISLKNWVNESLPHALTDVVDANLRVSMKDVAAK 298
++ +IS L ++D N + D+ K
Sbjct: 269 QIIN-QIS-----------KLHAIIDPNHEIEFPDIPEK 295
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L NA ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NAMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G G+ G VY + ++ G VAI+ LQ +E V+R + N++ S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
D +V+E + GSL + + +D + + + ALE+LH S ++H D
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRD 141
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
+K NILL + +++DFG + + ++ + T +MAP +
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSE--MVGTPYWMAP-------------E 186
Query: 229 FGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ K D++S G++ +E G+ P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 30/216 (13%)
Query: 48 NLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF-RSFDSECEVLRNVHHRNLLKIFSS 106
+LG G FG K + V + ++ R+F E +V+R + H N+LK
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
+ E + G+L + S + +R++ D+ + YLH S I+H
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH----SMNIIH 131
Query: 167 CDLKPSNILLDENMVARVSDFGISKLLGDGE------------DSVTQTMTMATIGYMAP 214
DL N L+ EN V+DFG+++L+ D + D + + +MAP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 215 VSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
+++ ++ K DV+SFG++L E
Sbjct: 192 -----EMINGRS--------YDEKVDVFSFGIVLCE 214
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 33/217 (15%)
Query: 50 LGTGSFGIVYKGILSD------GNNVAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+VY+G D VA+K R F +E V++ ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDT---------LERLNIMIDVWLALE 153
+ S +V+ELM +G L+++L S + E + + ++ +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
YL+ + VH DL N ++ + ++ DFG+++ + + + + + +MA
Sbjct: 144 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
P S LK +G+ + D++SFGV+L E
Sbjct: 200 PES-----LK--------DGVFTTSSDMWSFGVVLWE 223
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 33/217 (15%)
Query: 50 LGTGSFGIVYKGILSD------GNNVAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+VY+G D VA+K R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDT---------LERLNIMIDVWLALE 153
+ S +V+ELM +G L+++L S + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
YL+ + VH DL N ++ + ++ DFG+++ + + + + + +MA
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
P S LK +G+ + D++SFGV+L E
Sbjct: 201 PES-----LK--------DGVFTTSSDMWSFGVVLWE 224
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+L+D+ +V+DFG +K + +T + T Y+AP L
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAPEIIL 211
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S+G A D ++ GVL+ + G P
Sbjct: 212 ------------SKGYNKA-VDWWALGVLIYQMAAGYPP 237
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 30/221 (13%)
Query: 50 LGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD------SECEVLRNV-HHRNLL 101
LG G+FG +V G A+ +++ ++ D SE +++ ++ H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH-- 159
+ +C++ ++ E G L N+L + L+T I + LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 160 -------SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
+S +H D+ N+LL VA++ DFG+++ + + + + + + +M
Sbjct: 174 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 233
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
AP S +FD + + + DV+S+G+LL E F+
Sbjct: 234 APES-IFDC------------VYTVQSDVWSYGILLWEIFS 261
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 44/248 (17%)
Query: 50 LGTGSFGIVYKGILSDGNN-VAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFS--- 105
LG G G+V+ + +D + VAIK L ++ + E +++R + H N++K+F
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 106 -----------SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
S + + +V E M L N L L+ RL M + L+Y
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL-EQGPLLEEHARL-FMYQLLRGLKY 135
Query: 155 LHHGHSSAPIVHCDLKPSNILLD-ENMVARVSDFGISKLLGDGEDSVTQTMT--MATIGY 211
+H SA ++H DLKP+N+ ++ E++V ++ DFG+++++ D S ++ + T Y
Sbjct: 136 IH----SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM-DPHYSHKGHLSEGLVTKWY 190
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTG--EISLK 269
+P +L P N + D+++ G + E TGK +F G E+
Sbjct: 191 RSPRL----LLSPNN--------YTKAIDMWAAGCIFAEMLTGKT----LFAGAHELEQM 234
Query: 270 NWVNESLP 277
+ ES+P
Sbjct: 235 QLILESIP 242
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 44 FNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLL 101
F + + LG G+ G+V+K G +A K+ L++ A R+ E +VL + ++
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
+ + + ++ +E M GSL+ L + + + I V L YL H
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKHK- 144
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
I+H D+KPSNIL++ ++ DFG+S G DS+ + + T YM+P +
Sbjct: 145 --IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSP-----ER 193
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
L+ + S + D++S G+ L+E G+ P
Sbjct: 194 LQGTH--------YSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 95/235 (40%), Gaps = 36/235 (15%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQL------GRAFRSFDSECEVLRNVHHRNLLK 102
LG+G F IV K G A K K + G + + E +LR + H N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + E + + + YLH S
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLH----SK 127
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD+N+ ++ DFGI+ + G + T ++AP
Sbjct: 128 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTPEFVAPEIVN 184
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVN 273
++ L + D++S GV+ +G P F GE + N
Sbjct: 185 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGETKQETLTN 222
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G+ VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G+ VA+K +L R F+S E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 68
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 126
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 127 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 176
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 177 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 30/221 (13%)
Query: 50 LGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD------SECEVLRNV-HHRNLL 101
LG G+FG +V G A+ +++ ++ D SE +++ ++ H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH-- 159
+ +C++ ++ E G L N+L + L+T I + LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 160 -------SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
+S +H D+ N+LL VA++ DFG+++ + + + + + + +M
Sbjct: 174 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 233
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
AP S +FD + + + DV+S+G+LL E F+
Sbjct: 234 APES-IFDC------------VYTVQSDVWSYGILLWEIFS 261
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 50 LGTGSFGIVYKGILSDGNNV-AIKVFKLQLGRAFRSFDSECEVLRNVH-HRNLLKIFSSC 107
LG GSF I K + N A+K+ R + E L+ H N++K+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIIS---KRMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 108 SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHC 167
+ LV+EL+ G L + +F +T E IM + A+ ++H +VH
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVSHMH----DVGVVHR 130
Query: 168 DLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKP 224
DLKP N+L ++N+ ++ DFG ++L D+ T+ Y AP
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARL--KPPDNQPLKTPCFTLHYAAP---------- 178
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ ++ CD++S GV+L +G+ P
Sbjct: 179 ---ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 44 FNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLL 101
F + + LG G+ G+V+K G +A K+ L++ A R+ E +VL + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
+ + + ++ +E M GSL+ L + + + I V L YL H
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKHK- 125
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
I+H D+KPSNIL++ ++ DFG+S G DS+ + + T YM+P +
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSP-----ER 174
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISL 268
L+ + S + D++S G+ L+E G+ P E+ L
Sbjct: 175 LQGTH--------YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 28/223 (12%)
Query: 53 GSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS---CSN 109
G FG V+K L + VA+K+F +Q +++++ + E L + H N+L+ + ++
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 110 PDFKA-LVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH-------GHSS 161
D L+ GSL ++L ++ + L +I + L YLH GH
Sbjct: 93 VDVDLWLITAFHEKGSLSDFLKANVVSWNEL--CHIAETMARGLAYLHEDIPGLKDGHKP 150
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
A I H D+K N+LL N+ A ++DFG++ G+ + + T YMAP ++
Sbjct: 151 A-ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP-----EV 204
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFT----GKKPTDE 260
L+ F + + + D+Y+ G++L E + P DE
Sbjct: 205 LEGA-INFQRDAFL--RIDMYAMGLVLWELASRCTAADGPVDE 244
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 44 FNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLL 101
F + + LG G+ G+V+K G +A K+ L++ A R+ E +VL + ++
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
+ + + ++ +E M GSL+ L + + + I V L YL H
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI-LGKVSIAVIKGLTYLREKHK- 152
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
I+H D+KPSNIL++ ++ DFG+S G DS+ + + T YM+P +
Sbjct: 153 --IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSP-----ER 201
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISL 268
L+ + S + D++S G+ L+E G+ P E+ L
Sbjct: 202 LQGTH--------YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 240
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 44 FNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLL 101
F + + LG G+ G+V+K G +A K+ L++ A R+ E +VL + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
+ + + ++ +E M GSL+ L + + + I V L YL H
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKHK- 125
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
I+H D+KPSNIL++ ++ DFG+S G DS+ + + T YM+P +
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSP-----ER 174
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISL 268
L+ + S + D++S G+ L+E G+ P E+ L
Sbjct: 175 LQGTH--------YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 95/235 (40%), Gaps = 36/235 (15%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQL------GRAFRSFDSECEVLRNVHHRNLLK 102
LG+G F IV K G A K K + G + + E +LR + H N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + E + + + YLH S
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLH----SK 134
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD+N+ ++ DFGI+ + G + T ++AP
Sbjct: 135 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTPEFVAPEIVN 191
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVN 273
++ L + D++S GV+ +G P F GE + N
Sbjct: 192 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGETKQETLTN 229
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 44 FNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLL 101
F + + LG G+ G+V+K G +A K+ L++ A R+ E +VL + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
+ + + ++ +E M GSL+ L + + + I V L YL H
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKHK- 125
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
I+H D+KPSNIL++ ++ DFG+S G DS+ + + T YM+P +
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSP-----ER 174
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
L+ + S + D++S G+ L+E G+ P
Sbjct: 175 LQGTH--------YSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-ATIGYMAPVSQL 218
S +++ DLKP N+++D+ +V+DFG +K + +T + T Y+AP
Sbjct: 159 -SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK------GRTWXLCGTPEYLAP---- 207
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+I+ K + D ++ GVL+ E G P
Sbjct: 208 -EIIISKG--------YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G+ VA+K +L R F+S E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 78
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 136
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 137 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 186
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 187 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 226
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 44 FNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLL 101
F + + LG G+ G+V+K G +A K+ L++ A R+ E +VL + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
+ + + ++ +E M GSL+ L + + + I V L YL H
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKHK- 125
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
I+H D+KPSNIL++ ++ DFG+S G DS+ + + T YM+P +
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSP-----ER 174
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISL 268
L+ + S + D++S G+ L+E G+ P E+ L
Sbjct: 175 LQGTH--------YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 44 FNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLL 101
F + + LG G+ G+V+K G +A K+ L++ A R+ E +VL + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
+ + + ++ +E M GSL+ L + + + I V L YL H
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKHK- 125
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
I+H D+KPSNIL++ ++ DFG+S G DS+ + + T YM+P +
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSP-----ER 174
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISL 268
L+ + S + D++S G+ L+E G+ P E+ L
Sbjct: 175 LQGTH--------YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 44 FNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLL 101
F + + LG G+ G+V+K G +A K+ L++ A R+ E +VL + ++
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
+ + + ++ +E M GSL+ L + + + I V L YL H
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI-LGKVSIAVIKGLTYLREKHK- 187
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
I+H D+KPSNIL++ ++ DFG+S G DS+ + + T YM+P +
Sbjct: 188 --IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSP-----ER 236
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISL 268
L+ + S + D++S G+ L+E G+ P E+ L
Sbjct: 237 LQGTH--------YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 275
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 95/235 (40%), Gaps = 36/235 (15%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQL------GRAFRSFDSECEVLRNVHHRNLLK 102
LG+G F IV K G A K K + G + + E +LR + H N++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + E + + + YLH S
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLH----SK 148
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD+N+ ++ DFGI+ + G + T ++AP
Sbjct: 149 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTPEFVAPEIVN 205
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVN 273
++ L + D++S GV+ +G P F GE + N
Sbjct: 206 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGETKQETLTN 243
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G+ VA+K +L R F+S E
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 92
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 150
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 151 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 200
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 201 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 240
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 27/254 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLG--RAFRSFDSECEVLRNV--HHRNLLKIFS 105
+G+G V++ + AIK L+ + S+ +E L + H +++++
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH-HGHSSAPI 164
+ +V+E N L +WL +D ER + ++ A+ +H HG I
Sbjct: 80 YEITDQYIYMVMECG-NIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG-----I 132
Query: 165 VHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKP 224
VH DLKP+N L+ + M+ ++ DFGI+ + SV + + T+ YM P + +
Sbjct: 133 VHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP--EAIKDMSS 189
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNESLPHALTDVV 284
S+ IS K DV+S G +L GK P ++ +IS L ++
Sbjct: 190 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QIS-----------KLHAII 237
Query: 285 DANLRVSMKDVAAK 298
D N + D+ K
Sbjct: 238 DPNHEIEFPDIPEK 251
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LGTGSFG ++ GN+ A+K+ Q + + +E +L+ V+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L+K+ S + +V+E + G + + L F + R + L EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISK 191
S +++ DLKP N+L+D+ +V+DFG +K
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G+ VA+K +L R F+S E
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 91
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 149
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 150 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 199
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 200 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 239
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 34/215 (15%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRS----FDSECEVLRNVHHRNLLKIF 104
+GTGS+G K SDG + K +L G + SE +LR + H N+++ +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 105 SSCSNPDFKAL--VLELMPNGSLENWLYS---HNYFLDTLERLNIMIDVWLALEYLHH-- 157
+ L V+E G L + + +LD L +M + LAL+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 158 --GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
GH+ ++H DLKP+N+ LD ++ DFG++++L D+ + T YM+P
Sbjct: 132 DGGHT---VLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKTFVGTPYYMSPE 186
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
+ + K D++S G LL E
Sbjct: 187 QM-------------NRMSYNEKSDIWSLGCLLYE 208
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 25/218 (11%)
Query: 44 FNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKL---QLGRAFRSFDSECEVLRNVHHRN 99
F++ +G GSFG VY + + VAIK Q ++ E L+ + H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
++ + C + A ++ GS + L H L +E + L YLH
Sbjct: 77 TIQ-YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH--- 132
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
S ++H D+K NILL E + ++ DFG + ++ V T +MAP L
Sbjct: 133 -SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVIL- 184
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
EG K DV+S G+ +E K P
Sbjct: 185 ---------AMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 50 LGTGSFGIV-YKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G GS GIV G VA+K+ L+ + +E ++R+ H N+++++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+ +++E + G+L + + L+ + + V AL YLH + ++H D
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH----AQGVIHRD 166
Query: 169 LKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAK 228
+K +ILL + ++SDFG + +D + + T +MAP +
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCAQI--SKDVPKRKXLVGTPYWMAP-------------E 211
Query: 229 FGSEGIISAKCDVYSFGVLLMETFTGKKP 257
S + + + D++S G++++E G+ P
Sbjct: 212 VISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 34/215 (15%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRS----FDSECEVLRNVHHRNLLKIF 104
+GTGS+G K SDG + K +L G + SE +LR + H N+++ +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 105 SSCSNPDFKAL--VLELMPNGSLENWLYS---HNYFLDTLERLNIMIDVWLALEYLHH-- 157
+ L V+E G L + + +LD L +M + LAL+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 158 --GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
GH+ ++H DLKP+N+ LD ++ DFG++++L D+ + T YM+P
Sbjct: 132 DGGHT---VLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPE 186
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
+ + K D++S G LL E
Sbjct: 187 QM-------------NRMSYNEKSDIWSLGCLLYE 208
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 27/254 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLG--RAFRSFDSECEVLRNV--HHRNLLKIFS 105
+G+G V++ + AIK L+ + S+ +E L + H +++++
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH-HGHSSAPI 164
+ +V+E N L +WL +D ER + ++ A+ +H HG I
Sbjct: 76 YEITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG-----I 128
Query: 165 VHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKP 224
VH DLKP+N L+ + M+ ++ DFGI+ + SV + + T+ YM P + +
Sbjct: 129 VHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP--EAIKDMSS 185
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNESLPHALTDVV 284
S+ IS K DV+S G +L GK P ++ +IS L ++
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QIS-----------KLHAII 233
Query: 285 DANLRVSMKDVAAK 298
D N + D+ K
Sbjct: 234 DPNHEIEFPDIPEK 247
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 27/254 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLG--RAFRSFDSECEVLRNV--HHRNLLKIFS 105
+G+G V++ + AIK L+ + S+ +E L + H +++++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH-HGHSSAPI 164
+ +V+E N L +WL +D ER + ++ A+ +H HG I
Sbjct: 96 YEITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG-----I 148
Query: 165 VHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKP 224
VH DLKP+N L+ + M+ ++ DFGI+ + SV + + T+ YM P + +
Sbjct: 149 VHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP--EAIKDMSS 205
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNESLPHALTDVV 284
S+ IS K DV+S G +L GK P ++ +IS L ++
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QIS-----------KLHAII 253
Query: 285 DANLRVSMKDVAAK 298
D N + D+ K
Sbjct: 254 DPNHEIEFPDIPEK 267
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 25/218 (11%)
Query: 44 FNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKL---QLGRAFRSFDSECEVLRNVHHRN 99
F++ +G GSFG VY + + VAIK Q ++ E L+ + H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
++ + C + A ++ GS + L H L +E + L YLH
Sbjct: 116 TIQ-YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH--- 171
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
S ++H D+K NILL E + ++ DFG + ++ V T +MAP L
Sbjct: 172 -SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVIL- 223
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
EG K DV+S G+ +E K P
Sbjct: 224 ---------AMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 33/217 (15%)
Query: 50 LGTGSFGIVYKGILSD------GNNVAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+VY+G D VA+K R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDT---------LERLNIMIDVWLALE 153
+ S +V+ELM +G L+++L S + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
YL+ + VH DL N ++ + ++ DFG+++ + + + + +MA
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
P S LK +G+ + D++SFGV+L E
Sbjct: 201 PES-----LK--------DGVFTTSSDMWSFGVVLWE 224
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 27/254 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLG--RAFRSFDSECEVLRNV--HHRNLLKIFS 105
+G+G V++ + AIK L+ + S+ +E L + H +++++
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH-HGHSSAPI 164
+ +V+E N L +WL +D ER + ++ A+ +H HG I
Sbjct: 77 YEITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG-----I 129
Query: 165 VHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKP 224
VH DLKP+N L+ + M+ ++ DFGI+ + SV + + T+ YM P + +
Sbjct: 130 VHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP--EAIKDMSS 186
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNESLPHALTDVV 284
S+ IS K DV+S G +L GK P ++ +IS L ++
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QIS-----------KLHAII 234
Query: 285 DANLRVSMKDVAAK 298
D N + D+ K
Sbjct: 235 DPNHEIEFPDIPEK 248
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 115/284 (40%), Gaps = 27/284 (9%)
Query: 12 KRSAKIIAPIDLLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNV-A 70
K SAK A +D L R + + LG G F Y+ D V A
Sbjct: 12 KPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 71 IKVFKLQL---GRAFRSFDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLEN 127
KV + +E + +++ + +++ + DF +VLE+ SL
Sbjct: 72 GKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE 131
Query: 128 WLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDF 187
L+ + E M ++YLH+ ++H DLK N+ L+++M ++ DF
Sbjct: 132 -LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR----VIHRDLKLGNLFLNDDMDVKIGDF 186
Query: 188 GI-SKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGV 246
G+ +K+ DGE T T Y+AP ++L K F + D++S G
Sbjct: 187 GLATKIEFDGERKKT---LCGTPNYIAP-----EVLCKKGHSF--------EVDIWSLGC 230
Query: 247 LLMETFTGKKPTDEMFTGEISLKNWVNE-SLPHALTDVVDANLR 289
+L GK P + E ++ NE S+P + V A +R
Sbjct: 231 ILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIR 274
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 44 FNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLL 101
F + LG G+ G+V K G +A K+ L++ A R+ E +VL + ++
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSS 161
+ + + ++ +E M GSL+ L + + + I V L YL H
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEI-LGKVSIAVLRGLAYLREKHQ- 135
Query: 162 APIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDI 221
I+H D+KPSNIL++ ++ DFG+S G DS+ + + T YMAP +
Sbjct: 136 --IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMAP-----ER 184
Query: 222 LKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
L+ + S + D++S G+ L+E G+ P
Sbjct: 185 LQGTH--------YSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G+ VA+K +L R F+S E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 68
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCAKLTDDHVQFL- 126
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 127 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 176
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 177 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + +G+G++G V G+ VA+K +L R F+S E
Sbjct: 27 IWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 82
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 83 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 140
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 141 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 190
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 191 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 230
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + S D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKSQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+ + D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 23/223 (10%)
Query: 42 EGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHH 97
E ++ LG G++G V + VA+K+ ++ RA + E + + ++H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEIXINKMLNH 63
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP--- 175
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 176 --ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 23/223 (10%)
Query: 42 EGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHH 97
E ++ LG G++G V + VA+K+ ++ RA + E + + ++H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEIXINKMLNH 64
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP--- 176
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 177 --ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 210
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 51/244 (20%)
Query: 44 FNECNLLGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRN 94
+ +G+G+ GIV Y IL NVAIK + RA+R E +++
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKV 79
Query: 95 VHHRN---LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+H+N LL +F+ + +F+ +V+ELM + +L + LD ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQM 135
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ +++LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T
Sbjct: 136 LVGIKHLH----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGI-ISAKCDVYSFGVLLMETFTGKKPTDEMFTGEIS 267
Y AP L G+ D++S GV++ E G +F G
Sbjct: 189 RYYRAPEVIL--------------GMGYKENVDIWSVGVIMGEMIKG----GVLFPGTDH 230
Query: 268 LKNW 271
+ W
Sbjct: 231 IDQW 234
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 26/219 (11%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LLG G+FG ++ + G A+K+ + ++ A +E VL+N H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L + + D V+E G L L F + R ++ ALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG-EDSVTQTMTMATIGYMAPVSQL 218
S +V+ D+K N++LD++ +++DFG+ K +G D T T Y+AP
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAP---- 174
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ + D + GV++ E G+ P
Sbjct: 175 -EVLEDND--------YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 38/279 (13%)
Query: 36 DIQRATEGFNEC-----------NLLGTGSFGIVYKGILSDGNNVAIKVFKLQLG--RAF 82
D +A+ NEC +G+G V++ + AIK L+ +
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 98
Query: 83 RSFDSECEVLRNV--HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLE 140
S+ +E L + H +++++ + +V+E N L +WL +D E
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKK-SIDPWE 156
Query: 141 RLNIMIDVWLALEYLH-HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS 199
R + ++ A+ +H HG IVH DLKP+N L+ + M+ ++ DFGI+ + S
Sbjct: 157 RKSYWKNMLEAVHTIHQHG-----IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTS 210
Query: 200 VTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
V + + + YM P + + S+ IS K DV+S G +L GK P
Sbjct: 211 VVKDSQVGAVNYMPP--EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
Query: 260 EMFTGEISLKNWVNESLPHALTDVVDANLRVSMKDVAAK 298
++ +IS L ++D N + D+ K
Sbjct: 269 QIIN-QIS-----------KLHAIIDPNHEIEFPDIPEK 295
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 42/232 (18%)
Query: 50 LGTGSFGIVYKGIL------SDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLL- 101
LG FG VYKG L VAIK K + R F E + + H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 102 ------------KIFSSCSNPDFKALVLELMPN---GSLENWLYSHNYFLDTLERLNIMI 146
IFS CS+ D ++ P+ GS ++ + L+ + ++++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD-DRTVKSALEPPDFVHLVA 152
Query: 147 DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM 206
+ +EYL SS +VH DL N+L+ + + ++SD G+ + + + ++
Sbjct: 153 QIAAGMEYL----SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
I +MAP + ++ G S D++S+GV+L E F+ G +P
Sbjct: 209 LPIRWMAPEAIMY-------------GKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 26/228 (11%)
Query: 35 LDIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECE 90
+D + F+ LLG G+FG ++ + G A+K+ + ++ A +E
Sbjct: 3 MDPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 91 VLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL 150
VL+N H L + + D V+E G L L F + R ++
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVS 121
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG-EDSVTQTMTMATI 209
ALEYLH S +V+ D+K N++LD++ +++DFG+ K +G D T T
Sbjct: 122 ALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTP 174
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
Y+AP ++L+ + D + GV++ E G+ P
Sbjct: 175 EYLAP-----EVLEDND--------YGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 26/219 (11%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LLG G+FG ++ + G A+K+ + ++ A +E VL+N H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L + + D V+E G L L F + R ++ ALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG-EDSVTQTMTMATIGYMAPVSQL 218
S +V+ D+K N++LD++ +++DFG+ K +G D T T Y+AP
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAP---- 174
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ + D + GV++ E G+ P
Sbjct: 175 -EVLEDND--------YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 26/219 (11%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LLG G+FG ++ + G A+K+ + ++ A +E VL+N H
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L + + D V+E G L L F + R ++ ALEYLH
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 125
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG-EDSVTQTMTMATIGYMAPVSQL 218
S +V+ D+K N++LD++ +++DFG+ K +G D T T Y+AP
Sbjct: 126 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAP---- 177
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ + D + GV++ E G+ P
Sbjct: 178 -EVLEDND--------YGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 79
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 137
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 138 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMT 187
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 188 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 227
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHHR 98
E ++ LG G++G V + + A+ V + + RA + E + + ++H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH-- 121
Query: 159 HSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP---- 175
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 176 -ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 23/234 (9%)
Query: 42 EGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHH 97
E ++ LG G++G V + VA+K+ ++ RA + E + + ++H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNH 63
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP--- 175
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNW 271
++LK + +F +E + DV+S G++L G+ P D+ +W
Sbjct: 176 --ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQPSDSXQEYSDW 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 26/219 (11%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LLG G+FG ++ + G A+K+ + ++ A +E VL+N H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L + + D V+E G L L F + R ++ ALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG-EDSVTQTMTMATIGYMAPVSQL 218
S +V+ D+K N++LD++ +++DFG+ K +G D T T Y+AP
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAP---- 174
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ + D + GV++ E G+ P
Sbjct: 175 -EVLEDND--------YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 42/232 (18%)
Query: 50 LGTGSFGIVYKGIL------SDGNNVAIKVFKLQLGRAFRS-FDSECEVLRNVHHRNLL- 101
LG FG VYKG L VAIK K + R F E + + H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 102 ------------KIFSSCSNPDFKALVLELMPN---GSLENWLYSHNYFLDTLERLNIMI 146
IFS CS+ D ++ P+ GS ++ + L+ + ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD-DRTVKSALEPPDFVHLVA 135
Query: 147 DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM 206
+ +EYL SS +VH DL N+L+ + + ++SD G+ + + + ++
Sbjct: 136 QIAAGMEYL----SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
I +MAP + ++ G S D++S+GV+L E F+ G +P
Sbjct: 192 LPIRWMAPEAIMY-------------GKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 79
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 137
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 138 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMT 187
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 188 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 227
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 26/219 (11%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LLG G+FG ++ + G A+K+ + ++ A +E VL+N H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L + + D V+E G L L F + R ++ ALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG-EDSVTQTMTMATIGYMAPVSQL 218
S +V+ D+K N++LD++ +++DFG+ K +G D T T Y+AP
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAP---- 174
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ + D + GV++ E G+ P
Sbjct: 175 -EVLEDND--------YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 22 IWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 77
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 135
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 136 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMT 185
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 186 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 225
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 26/219 (11%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F+ LLG G+FG ++ + G A+K+ + ++ A +E VL+N H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L + + D V+E G L L F + R ++ ALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG-EDSVTQTMTMATIGYMAPVSQL 218
S +V+ D+K N++LD++ +++DFG+ K +G D T T Y+AP
Sbjct: 123 -SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAP---- 174
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ + D + GV++ E G+ P
Sbjct: 175 -EVLEDND--------YGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F LLG G+FG ++ + G A+K+ K ++ A +E VL+N H
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 209
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L + S D V+E G L L F + R ++ AL+YLH
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--- 265
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG-EDSVTQTMTMATIGYMAPVSQL 218
S +V+ DLK N++LD++ +++DFG+ K +G +D T T Y+AP
Sbjct: 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYLAP---- 318
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ + D + GV++ E G+ P
Sbjct: 319 -EVLEDND--------YGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GXVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 26/225 (11%)
Query: 39 RATEGFNECNLLGTGSFGIVYKGIL-SDGNNVAIKVFKLQL--GRAFRSFDSECEVLRNV 95
R T+ + LG G+F +V + + + A K+ + R + + E + R +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 96 HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
H N++++ S S F LV +L+ G L + + Y+ + + + LE +
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIHQILESV 143
Query: 156 HHGHSSAPIVHCDLKPSNILLD---ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
+H H IVH DLKP N+LL + +++DFG++ + GE T GY+
Sbjct: 144 NHIHQHD-IVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFA-GTPGYL 200
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+P ++L + +G D+++ GV+L G P
Sbjct: 201 SP-----EVL--RKDPYGK------PVDIWACGVILYILLVGYPP 232
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 79
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 137
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 138 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMT 187
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 188 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 227
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 51/244 (20%)
Query: 44 FNECNLLGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRN 94
+ +G+G+ GIV Y IL NVAIK + RA+R E +++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKV 79
Query: 95 VHHRN---LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+H+N LL +F+ + +F+ +V+ELM + +L + LD ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQM 135
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ +++LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T
Sbjct: 136 LVGIKHLH----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGI-ISAKCDVYSFGVLLMETFTGKKPTDEMFTGEIS 267
Y AP L G+ D++S GV++ E G +F G
Sbjct: 189 RYYRAPEVIL--------------GMGYKENVDIWSVGVIMGEMIKG----GVLFPGTDH 230
Query: 268 LKNW 271
+ W
Sbjct: 231 IDQW 234
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 77
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 135
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 136 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMT 185
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 186 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 225
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F LLG G+FG ++ + G A+K+ K ++ A +E VL+N H
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 212
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L + S D V+E G L L F + R ++ AL+YLH
Sbjct: 213 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--- 268
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG-EDSVTQTMTMATIGYMAPVSQL 218
S +V+ DLK N++LD++ +++DFG+ K +G +D T T Y+AP
Sbjct: 269 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYLAP---- 321
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ + D + GV++ E G+ P
Sbjct: 322 -EVLEDND--------YGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F LLG G+FG ++ + G A+K+ K ++ A +E VL+N H
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 70
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L + S D V+E G L L F + R ++ AL+YLH
Sbjct: 71 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--- 126
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG-EDSVTQTMTMATIGYMAPVSQL 218
S +V+ DLK N++LD++ +++DFG+ K +G +D T T Y+AP
Sbjct: 127 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAP---- 179
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ + D + GV++ E G+ P
Sbjct: 180 -EVLEDND--------YGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 46/249 (18%)
Query: 25 PVATWRRTSYLD-----IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL 78
P++ R T Y I E + + +G+G++G V G VA+K +L
Sbjct: 2 PMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KL 57
Query: 79 GRAFRSF------DSECEVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLE 126
R F+S E +L+++ H N LL +F+ S +F LV LM L
Sbjct: 58 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLN 116
Query: 127 NWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSD 186
N + D ++ L + + L+Y+H SA I+H DLKPSN+ ++E+ ++ D
Sbjct: 117 NIVKCQKLTDDHVQFL--IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILD 170
Query: 187 FGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGV 246
FG+++ D T +AT Y AP L N ++ + D++S G
Sbjct: 171 FGLARHTDD-----EMTGYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGC 213
Query: 247 LLMETFTGK 255
++ E TG+
Sbjct: 214 IMAELLTGR 222
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 27/284 (9%)
Query: 12 KRSAKIIAPIDLLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNV-A 70
K SAK A +D L R + + LG G F Y+ D V A
Sbjct: 12 KPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 71 IKVFKLQL---GRAFRSFDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLEN 127
KV + +E + +++ + +++ + DF +VLE+ SL
Sbjct: 72 GKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE 131
Query: 128 WLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDF 187
L+ + E M ++YLH+ ++H DLK N+ L+++M ++ DF
Sbjct: 132 -LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR----VIHRDLKLGNLFLNDDMDVKIGDF 186
Query: 188 GI-SKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGV 246
G+ +K+ DGE + T Y+AP ++L K F + D++S G
Sbjct: 187 GLATKIEFDGE---RKKXLCGTPNYIAP-----EVLCKKGHSF--------EVDIWSLGC 230
Query: 247 LLMETFTGKKPTDEMFTGEISLKNWVNE-SLPHALTDVVDANLR 289
+L GK P + E ++ NE S+P + V A +R
Sbjct: 231 ILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIR 274
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 77
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 135
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 136 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 185
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 186 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 69
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 127
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 128 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 177
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 178 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 217
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 83
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 141
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 142 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMT 191
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 192 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 231
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 38/229 (16%)
Query: 41 TEGFNECNLLGTGSFGIVYKGILSD-GNNVAIK---VFKLQLGRAFRSFDSECEVLRNVH 96
+ F +LLG G++G+V G VAIK F L A R+ E ++L++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLF-ALRTL-REIKILKHFK 67
Query: 97 HRNLLKIFS-----SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLA 151
H N++ IF+ S N + ++ ELM L + + D ++ + A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYF--IYQTLRA 124
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLL----GDGEDSVTQ----T 203
++ LH + ++H DLKPSN+L++ N +V DFG+++++ D + Q T
Sbjct: 125 VKVLHGSN----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETF 252
+AT Y AP L +AK+ S DV+S G +L E F
Sbjct: 181 EXVATRWYRAPEVML------TSAKY------SRAMDVWSCGCILAELF 217
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVH 96
E F + +G G++G+VYK G VA+K K++L S E +L+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 60
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--A 151
H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 112
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+ L HS ++H DLKP N+L++ +++DFG+++ G T T + T+ Y
Sbjct: 113 LQGLSFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 169
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 170 RAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 35/232 (15%)
Query: 39 RATEGFNECNLLGTGSFGIVYKG--ILSDGNNVAIKVFKLQLGRAFRSFDS--ECEVLRN 94
RA + + +G G++G V+K + + G VA+K ++Q G + E VLR+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 95 VH---HRNLLKIFSSC--SNPDFKA---LVLELMPNGSLENWLYS-HNYFLDTLERLNIM 145
+ H N++++F C S D + LV E + + L +L + T ++M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L++LH S +VH DLKP NIL+ + +++DFG++++ + T
Sbjct: 127 FQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSV 179
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+ T+ Y AP L + + D++S G + E F +KP
Sbjct: 180 VVTLWYRAPEVLL-------------QSSYATPVDLWSVGCIFAEMFR-RKP 217
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVH 96
E F + +G G++G+VYK G VA+K K++L S E +L+ ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 59
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--A 151
H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 111
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+ L HS ++H DLKP N+L++ +++DFG+++ G T T + T+ Y
Sbjct: 112 LQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 168
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 169 RAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVH 96
E F + +G G++G+VYK G VA+K K++L S E +L+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 60
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--A 151
H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 112
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+ L HS ++H DLKP N+L++ +++DFG+++ G T T + T+ Y
Sbjct: 113 LQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 169
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 170 RAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVH 96
E F + +G G++G+VYK G VA+K K++L S E +L+ ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 59
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--A 151
H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 111
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+ L HS ++H DLKP N+L++ +++DFG+++ G T T + T+ Y
Sbjct: 112 LQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 168
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 169 RAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 33/217 (15%)
Query: 50 LGTGSFGIVYKGILSD------GNNVAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+VY+G D VA+K R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDT---------LERLNIMIDVWLALE 153
+ S +V+ELM +G L+++L S + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
YL+ + VH +L N ++ + ++ DFG+++ + + + + + +MA
Sbjct: 145 YLN----AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
P S LK +G+ + D++SFGV+L E
Sbjct: 201 PES-----LK--------DGVFTTSSDMWSFGVVLWE 224
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 33/217 (15%)
Query: 50 LGTGSFGIVYKGILSD------GNNVAIKVFKLQLG-RAFRSFDSECEVLRNVHHRNLLK 102
LG GSFG+VY+G D VA+K R F +E V++ ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDT---------LERLNIMIDVWLALE 153
+ S +V+ELM +G L+++L S + E + + ++ +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
YL+ + VH +L N ++ + ++ DFG+++ + + + + + +MA
Sbjct: 146 YLN----AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
P S LK +G+ + D++SFGV+L E
Sbjct: 202 PES-----LK--------DGVFTTSSDMWSFGVVLWE 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 69
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 127
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 128 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 177
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 178 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 217
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F LLG G+FG ++ + G A+K+ K ++ A +E VL+N H
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 69
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L + S D V+E G L L F + R ++ AL+YLH
Sbjct: 70 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--- 125
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG-EDSVTQTMTMATIGYMAPVSQL 218
S +V+ DLK N++LD++ +++DFG+ K +G +D T T Y+AP
Sbjct: 126 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAP---- 178
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ + D + GV++ E G+ P
Sbjct: 179 -EVLEDND--------YGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 68
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 126
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 127 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 176
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 177 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 38/239 (15%)
Query: 39 RATEGFNECNLLGTGSFGIVYKG--ILSDGNNVAIKVFKLQLGRAFRSFDS--ECEVLRN 94
RA + + +G G++G V+K + + G VA+K ++Q G + E VLR+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 95 VH---HRNLLKIFSSC--SNPDFKA---LVLELMPNGSLENWLYS-HNYFLDTLERLNIM 145
+ H N++++F C S D + LV E + + L +L + T ++M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L++LH S +VH DLKP NIL+ + +++DFG++++ + T
Sbjct: 127 FQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSV 179
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTG 264
+ T+ Y AP L + + D++S G + E F +KP +F G
Sbjct: 180 VVTLWYRAPEVLL-------------QSSYATPVDLWSVGCIFAEMFR-RKP---LFRG 221
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVH 96
E F + +G G++G+VYK G VA+K K++L S E +L+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 60
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--A 151
H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 112
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+ L HS ++H DLKP N+L++ +++DFG+++ G T T + T+ Y
Sbjct: 113 LQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 169
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 170 RAPEILL-------GXKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 15 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 70
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 71 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 128
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 129 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 178
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 179 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD---SECEVLRNVHHRN 99
F LLG G+FG ++ + G A+K+ K ++ A +E VL+N H
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 71
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGH 159
L + S D V+E G L L F + R ++ AL+YLH
Sbjct: 72 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--- 127
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDG-EDSVTQTMTMATIGYMAPVSQL 218
S +V+ DLK N++LD++ +++DFG+ K +G +D T T Y+AP
Sbjct: 128 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAP---- 180
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L+ + D + GV++ E G+ P
Sbjct: 181 -EVLEDND--------YGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVH 96
E F + +G G++G+VYK G VA+K K++L S E +L+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 60
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--A 151
H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 112
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+ L HS ++H DLKP N+L++ +++DFG+++ G T T + T+ Y
Sbjct: 113 LQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 169
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 170 RAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 59
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLF 111
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T T + T+
Sbjct: 112 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTL 168
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 169 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVH 96
E F + +G G++G+VYK G VA+K K++L S E +L+ ++
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 64
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--A 151
H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 116
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+ L HS ++H DLKP N+L++ +++DFG+++ G T T + T+ Y
Sbjct: 117 LQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 173
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 174 RAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G+ VA+K +L R F+S E
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 92
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 150
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D
Sbjct: 151 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMX 200
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 201 GXVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 240
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 38/239 (15%)
Query: 39 RATEGFNECNLLGTGSFGIVYKG--ILSDGNNVAIKVFKLQLGRAFRSFDS--ECEVLRN 94
RA + + +G G++G V+K + + G VA+K ++Q G + E VLR+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 95 VH---HRNLLKIFSSC--SNPDFKA---LVLELMPNGSLENWLYS-HNYFLDTLERLNIM 145
+ H N++++F C S D + LV E + + L +L + T ++M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 146 IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT 205
+ L++LH S +VH DLKP NIL+ + +++DFG++++ + T
Sbjct: 127 FQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSV 179
Query: 206 MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTG 264
+ T+ Y AP L + + D++S G + E F +KP +F G
Sbjct: 180 VVTLWYRAPEVLL-------------QSSYATPVDLWSVGCIFAEMFR-RKP---LFRG 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 77
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 135
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 136 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 185
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 186 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 225
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVH 96
E F + +G G++G+VYK G VA+K K++L S E +L+ ++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 67
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--A 151
H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 119
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+ L HS ++H DLKP N+L++ +++DFG+++ G T T + T+ Y
Sbjct: 120 LQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 176
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 177 RAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 16 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 71
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 72 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 129
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 130 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 179
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 180 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 79
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 137
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 138 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 187
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 188 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 78
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 136
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 137 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 186
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 187 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 74
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 132
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 133 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 182
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 183 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 222
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHHR 98
E ++ LG G++G V + + A+ V + + RA + E + + ++H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH-- 121
Query: 159 HSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP---- 175
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 176 -ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 209
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 38/229 (16%)
Query: 41 TEGFNECNLLGTGSFGIVYKGILSD-GNNVAIK---VFKLQLGRAFRSFDSECEVLRNVH 96
+ F +LLG G++G+V G VAIK F L A R+ E ++L++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLF-ALRTL-REIKILKHFK 67
Query: 97 HRNLLKIFS-----SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLA 151
H N++ IF+ S N + ++ ELM L + + D ++ + A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYF--IYQTLRA 124
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLL----GDGEDSVTQ----T 203
++ LH + ++H DLKPSN+L++ N +V DFG+++++ D + Q T
Sbjct: 125 VKVLHGSN----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETF 252
+AT Y AP L +AK+ S DV+S G +L E F
Sbjct: 181 EYVATRWYRAPEVML------TSAKY------SRAMDVWSCGCILAELF 217
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 74
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 132
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 133 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 182
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 183 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 74
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 132
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 133 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD-----EMT 182
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 183 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 95
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 153
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 154 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 203
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 204 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 243
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 78
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 136
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 137 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD-----EMT 186
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 187 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 226
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVH 96
E F + +G G++G+VYK G VA+K K++L S E +L+ ++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 67
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--A 151
H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 119
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+ L HS ++H DLKP N+L++ +++DFG+++ G T T + T+ Y
Sbjct: 120 LQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 176
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 177 RAPEILL-------GXKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 83
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 141
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 142 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 191
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 192 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 231
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G+ VA+K +L R F+S E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 68
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 126
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D
Sbjct: 127 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMA 176
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 177 GFVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 216
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 84
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 142
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 143 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 192
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 193 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 84
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 142
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 143 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 192
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 193 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 232
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 23/223 (10%)
Query: 42 EGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHH 97
E ++ LG G++G V + VA+K+ ++ RA + E + + ++H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNH 63
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP--- 175
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 176 --ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHHR 98
E ++ LG G++G V + + A+ V + + RA + E + + ++H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH-- 122
Query: 159 HSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP---- 176
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 177 -ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 210
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 78
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 136
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 137 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 186
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 187 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G+ VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMA 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GFVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 34/180 (18%)
Query: 87 SECEVLRNVHHRNLLKIFSSCSNP--DFKALVLELMPNGSLENWLYSHNYFLDTLERLN- 143
E +L+ + H N++K+ +P D +V EL+ G + + TL+ L+
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME--------VPTLKPLSE 136
Query: 144 -----IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGED 198
D+ +EYLH+ I+H D+KPSN+L+ E+ +++DFG+S G D
Sbjct: 137 DQARFYFQDLIKGIEYLHY----QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSD 191
Query: 199 SVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKC-DVYSFGVLLMETFTGKKP 257
++ T+ T +MAP S L + K I S K DV++ GV L G+ P
Sbjct: 192 ALLSN-TVGTPAFMAPES-LSETRK----------IFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 15/146 (10%)
Query: 143 NIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQ 202
I + + ALE+LH S ++H D+KPSN+L++ + DFGIS L D V +
Sbjct: 140 KIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL---VDDVAK 193
Query: 203 TMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMF 262
+ Y AP + N + +G S K D++S G+ +E + P D
Sbjct: 194 DIDAGCKPYXAP--------ERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYDSWG 244
Query: 263 TGEISLKNWVNESLPHALTDVVDANL 288
T LK V E P D A
Sbjct: 245 TPFQQLKQVVEEPSPQLPADKFSAEF 270
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHHR 98
E ++ LG G++G V + + A+ V + + RA + E + + ++H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH-- 121
Query: 159 HSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP---- 175
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 176 -ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 209
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 48/234 (20%)
Query: 41 TEGFNECNLLGTGSFGIVYKGILSD-GNNVAIK--------VFKLQLGRAFRSFDSECEV 91
+ F +LLG G++G+V G VAIK +F L+ R E ++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKI 62
Query: 92 LRNVHHRNLLKIFS-----SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMI 146
L++ H N++ IF+ S N + ++ ELM L + + D ++ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYF--IY 119
Query: 147 DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLL----GDGEDSVTQ 202
A++ LH + ++H DLKPSN+L++ N +V DFG+++++ D + Q
Sbjct: 120 QTLRAVKVLHGSN----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 203 TMTM----ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETF 252
M AT Y AP L +AK+ S DV+S G +L E F
Sbjct: 176 QSGMVEFVATRWYRAPEVML------TSAKY------SRAMDVWSCGCILAELF 217
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G+ VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMA 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GFVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHHR 98
E ++ LG G++G V + + A+ V + + RA + E + + ++H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH-- 121
Query: 159 HSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP---- 175
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 176 -ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 27/225 (12%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV------ 95
E ++ LG G++G V + N V + +++ R+ D + + +
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 96 HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
+H N++K + + + L LE G L + + + + + + + YL
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
H I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 120 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP- 174
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 175 ----ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 208
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 92
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 150
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 151 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 200
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 201 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 240
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 33/221 (14%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRS----FDSECEVLRNVHHRNLLKIF- 104
+G GSF VYKG+ ++ V + +LQ + +S F E E L+ + H N+++ +
Sbjct: 34 IGRGSFKTVYKGLDTE-TTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 105 ---SSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMI-DVWLALEYLHHGHS 160
S+ LV EL +G+L+ +L + + ++ L + L++LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYL--KRFKVXKIKVLRSWCRQILKGLQFLHT--R 148
Query: 161 SAPIVHCDLKPSNILL-DENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
+ PI+H DLK NI + ++ D G++ L + + + T + AP
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEX--- 201
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
E DVY+FG +E T + P E
Sbjct: 202 -----------YEEKYDESVDVYAFGXCXLEXATSEYPYSE 231
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 32/186 (17%)
Query: 44 FNECNLLGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRN 94
+ +G+G+ GIV Y IL NVAIK + RA+R E +++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKV 79
Query: 95 VHHRN---LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+H+N LL +F+ + +F+ +V+ELM + +L + LD ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQM 135
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ +++LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T
Sbjct: 136 LVGIKHLH----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 209 IGYMAP 214
Y AP
Sbjct: 189 RYYRAP 194
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 91
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 149
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 150 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 199
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 200 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 239
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 23/223 (10%)
Query: 42 EGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHH 97
E ++ LG G++G V + VA+K+ ++ RA + E + + ++H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNH 64
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP--- 176
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 177 --ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHHR 98
E ++ LG G++G V + + A+ V + + RA + E + + ++H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH-- 121
Query: 159 HSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP---- 175
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 176 -ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 209
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 32/186 (17%)
Query: 44 FNECNLLGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRN 94
+ +G+G+ GIV Y +L NVAIK + RA+R E +++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKX 79
Query: 95 VHHRN---LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+H+N LL +F+ +F+ LV+ELM + +L + LD ER++ ++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDH-ERMSYLL-- 132
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ L + H HS+ I+H DLKPSNI++ + ++ DFG+++ G S T + T
Sbjct: 133 YQMLXGIKHLHSAG-IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 209 IGYMAP 214
Y AP
Sbjct: 189 RYYRAP 194
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHHR 98
E ++ LG G++G V + + A+ V + + RA + E + + ++H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH-- 121
Query: 159 HSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP---- 175
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 176 -ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 209
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 27/254 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLG--RAFRSFDSECEVLRNV--HHRNLLKIFS 105
+G+G V++ + AIK L+ + S+ +E L + H +++++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 106 SCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH-HGHSSAPI 164
+ +V+E N L +WL +D ER + ++ A+ +H HG I
Sbjct: 96 YEITDQYIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG-----I 148
Query: 165 VHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKP 224
VH DLKP+N L+ + M+ ++ DFGI+ + V + + T+ YM P + +
Sbjct: 149 VHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPP--EAIKDMSS 205
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNESLPHALTDVV 284
S+ IS K DV+S G +L GK P ++ +IS L ++
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QIS-----------KLHAII 253
Query: 285 DANLRVSMKDVAAK 298
D N + D+ K
Sbjct: 254 DPNHEIEFPDIPEK 267
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 27/225 (12%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV------ 95
E ++ LG G++G V + N V + +++ R+ D + + +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAML 62
Query: 96 HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
+H N++K + + + L LE G L + + + + + + + YL
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
H I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP- 176
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 177 ----ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 210
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHHR 98
E ++ LG G++G V + + A+ V + + RA + E + + ++H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH-- 121
Query: 159 HSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP---- 175
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 176 -ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 209
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 31/230 (13%)
Query: 50 LGTGSFGIV--YKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSC 107
LG G F V +G L DG+ A+K + E ++ R +H N+L++ + C
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 108 ---SNPDFKA-LVLELMPNGSLEN---WLYSHNYFLDTLERLNIMIDVWLALEYLHHGHS 160
+A L+L G+L N L FL + L +++ + LE +H
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---- 151
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM-------ATIGYMA 213
+ H DLKP+NILL + + D G + Q +T+ TI Y A
Sbjct: 152 AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFT 263
P +LF + S +I + DV+S G +L G+ P D +F
Sbjct: 212 P--ELFSV--------QSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 27/284 (9%)
Query: 12 KRSAKIIAPIDLLPVATWRRTSYLDIQRATEGFNECNLLGTGSFGIVYKGILSDGNNV-A 70
K SAK A +D L R + + LG G F Y+ D V A
Sbjct: 12 KPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 71 IKVFKLQL---GRAFRSFDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLEN 127
KV + +E + +++ + +++ + DF +VLE+ SL
Sbjct: 72 GKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE 131
Query: 128 WLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDF 187
L+ + E M ++YLH+ ++H DLK N+ L+++M ++ DF
Sbjct: 132 -LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR----VIHRDLKLGNLFLNDDMDVKIGDF 186
Query: 188 GI-SKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGV 246
G+ +K+ DGE + T Y+AP ++L K F + D++S G
Sbjct: 187 GLATKIEFDGE---RKKDLCGTPNYIAP-----EVLCKKGHSF--------EVDIWSLGC 230
Query: 247 LLMETFTGKKPTDEMFTGEISLKNWVNE-SLPHALTDVVDANLR 289
+L GK P + E ++ NE S+P + V A +R
Sbjct: 231 ILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIR 274
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 23/225 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAI-KVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G+FG VYK + + +A KV + + E ++L + H N++K+ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-ALEYLHHGHSSAPIVHC 167
+ +++E G+++ + L T ++ ++ L AL YLH I+H
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPL-TESQIQVVCKQTLDALNYLHDNK----IIHR 159
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIG---YMAPVSQLFDILKP 224
DLK NIL + +++DFG+S +++ T + IG +MAP + + K
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVS-----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 225 KNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
+ + K DV+S G+ L+E + P E+ + LK
Sbjct: 215 RPYDY--------KADVWSLGITLIEMAEIEPPHHELNPMRVLLK 251
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 40/227 (17%)
Query: 50 LGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD------SECEVLRNV-HHRNLL 101
LG G+FG +V G A+ +++ ++ D SE +++ ++ H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWL---------YSHNYFLDTLERL------NIMI 146
+ +C++ ++ E G L N+L YS+N + E+L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 147 DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTM 206
V + +L +S +H D+ N+LL VA++ DFG+++ + + + + +
Sbjct: 174 QVAQGMAFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 229
Query: 207 ATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
+ +MAP S +FD + + + DV+S+G+LL E F+
Sbjct: 230 LPVKWMAPES-IFDC------------VYTVQSDVWSYGILLWEIFS 263
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVF-KLQLGRAFRSFDSECEVLRNV--HHRNLLKIFSS 106
+G G +G V+ G G VA+KVF + FR E E+ + V H N+L ++
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFR----ETEIYQTVLMRHENILGFIAA 99
Query: 107 CSNPDFKA--------LVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH-- 156
D K L+ + NGSL ++L S LD L + L +LH
Sbjct: 100 ----DIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTE 153
Query: 157 --HGHSSAPIVHCDLKPSNILLDENMVARVSDFGIS-KLLGD-GEDSVTQTMTMATIGYM 212
I H DLK NIL+ +N ++D G++ K + D E + + T YM
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM 213
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
P ++L + + I A D+YSFG++L E
Sbjct: 214 PP-----EVLDESLNRNHFQSYIMA--DMYSFGLILWE 244
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 27/225 (12%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV------ 95
E ++ LG G++G V + N V + +++ R+ D + + +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 96 HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
+H N++K + + + L LE G L + + + + + + + YL
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
H I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP- 176
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 177 ----ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 27/225 (12%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV------ 95
E ++ LG G++G V + N V + +++ R+ D + + +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 96 HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
+H N++K + + + L LE G L + + + + + + + YL
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
H I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP- 176
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 177 ----ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 27/225 (12%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV------ 95
E ++ LG G++G V + N V + +++ R+ D + + +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 96 HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
+H N++K + + + L LE G L + + + + + + + YL
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
H I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP- 176
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 177 ----ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 210
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 133
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPAFVAPEIVN 190
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 191 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 233
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRL 255
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 22/210 (10%)
Query: 50 LGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSN 109
LG G FGIV++ + + + F G E +L HRN+L + S +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 110 PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDL 169
+ ++ E + + + + + L+ E ++ + V AL++LH S I H D+
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH----SHNIGHFDI 128
Query: 170 KPSNILLD--ENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
+P NI+ + ++ +FG ++ L G++ + Y AP D
Sbjct: 129 RPENIIYQTRRSSTIKIIEFGQARQLKPGDNF---RLLFTAPEYYAPEVHQHD------- 178
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++S D++S G L+ +G P
Sbjct: 179 ------VVSTATDMWSLGTLVYVLLSGINP 202
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 27/225 (12%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV------ 95
E ++ LG G++G V + N V + +++ R+ D + + +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 96 HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
+H N++K + + + L LE G L + + + + + + + YL
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
H I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 121 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP- 175
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 176 ----ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 27/225 (12%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV------ 95
E ++ LG G++G V + N V + +++ R+ D + + +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAV----NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 96 HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
+H N++K + + + L LE G L + + + + + + + YL
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
H I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 H----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP- 176
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 177 ----ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 210
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 50 LGTGSFGIVYKGILSD---GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS 106
LG GSFG V++ + D G A+K +L++ RA E + ++ ++ +
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRA-----EELMACAGLTSPRIVPLYGA 134
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
+ + +EL+ GSL L L L + LEYLH S I+H
Sbjct: 135 VREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEYLH----SRRILH 189
Query: 167 CDLKPSNILLD-ENMVARVSDFGISKLL---GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
D+K N+LL + A + DFG + L G G+D +T T +MAP +++
Sbjct: 190 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAP-----EVV 244
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
++ AK DV+S +++ G P + F G + LK
Sbjct: 245 LGRS--------CDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 283
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V + G +A+K +L R F+S E
Sbjct: 46 IWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK----KLSRPFQSIIHAKRTYREL 101
Query: 90 EVLRNVHHRN---LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ ++ +F LV LM L N + D ++ L
Sbjct: 102 RLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 159
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 160 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 209
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L + + D++S G ++ E TG+
Sbjct: 210 GYVATRWYRAPEIML------------NWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 32/186 (17%)
Query: 44 FNECNLLGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRN 94
+ +G+G+ GIV Y +L NVAIK + RA+R E +++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKX 79
Query: 95 VHHRN---LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+H+N LL +F+ +F+ LV+ELM + +L + LD ++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQM 135
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+++LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T
Sbjct: 136 LCGIKHLH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 209 IGYMAP 214
Y AP
Sbjct: 189 RYYRAP 194
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ D+G+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 103/227 (45%), Gaps = 27/227 (11%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNN-VAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
+ + + +G G++G V+K + + VA+K +L G + C +L+ + H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKH 60
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+N++++ + LV E + L+ + S N LD + + + L + H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH- 118
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
S ++H DLKP N+L++ N +++DFG+++ G + Y A V
Sbjct: 119 ---SRNVLHRDLKPQNLLINRNGELKLADFGLARAFG-----------IPVRCYSAEVVT 164
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTG 264
L+ +P + FG++ + S D++S G + E +P +F G
Sbjct: 165 LW--YRPPDVLFGAK-LYSTSIDMWSAGCIFAELANAARP---LFPG 205
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 133
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVN 190
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 191 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 233
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRL 255
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 133
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVN 190
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 191 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 233
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRL 255
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 133
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVN 190
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 191 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 233
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRL 255
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 17/222 (7%)
Query: 50 LGTGSFGIVYKGILSDGNNVAI-KVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G+FG VYK + + +A KV + + E ++L + H N++K+ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-ALEYLHHGHSSAPIVHC 167
+ +++E G+++ + L T ++ ++ L AL YLH I+H
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPL-TESQIQVVCKQTLDALNYLHDNK----IIHR 159
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DLK NIL + +++DFG+S + + + T +MAP + + K +
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPY 217
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
+ K DV+S G+ L+E + P E+ + LK
Sbjct: 218 DY--------KADVWSLGITLIEMAEIEPPHHELNPMRVLLK 251
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 133
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVN 190
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 191 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 233
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRL 255
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 133
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVN 190
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 191 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 233
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRL 255
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 32 TSYLDIQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQL--GRAFRSFDSE 88
T L Q + F E LG G+F +V + + + G A K+ + R + + E
Sbjct: 15 TENLYFQSMYQLFEE---LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLERE 71
Query: 89 CEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
+ R + H N++++ S S L+ +L+ G L + + Y+ + I
Sbjct: 72 ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ--- 128
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENM---VARVSDFGISKLLGDGEDSVTQTMT 205
LE + H H +VH DLKP N+LL + +++DFG++ + +GE
Sbjct: 129 -QILEAVLHCHQMG-VVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFA 185
Query: 206 MATIGYMAP 214
T GY++P
Sbjct: 186 -GTPGYLSP 193
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 27/257 (10%)
Query: 39 RATEGFNECNLLGTGSFGIVYKGILSDGNNV-AIKVFKLQL---GRAFRSFDSECEVLRN 94
R + + LG G F Y+ D V A KV + +E + ++
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
+ + +++ + DF +VLE+ SL L+ + E M ++Y
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 141
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGI-SKLLGDGEDSVTQTMTMATIGYMA 213
LH+ ++H DLK N+ L+++M ++ DFG+ +K+ DGE + T Y+A
Sbjct: 142 LHNNR----VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKDLCGTPNYIA 194
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVN 273
P ++L K F + D++S G +L GK P + E ++ N
Sbjct: 195 P-----EVLCKKGHSF--------EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 241
Query: 274 E-SLPHALTDVVDANLR 289
E S+P + V A +R
Sbjct: 242 EYSVPRHINPVASALIR 258
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 133
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVN 190
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 191 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 233
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRL 255
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 17/222 (7%)
Query: 50 LGTGSFGIVYKGILSDGNNVAI-KVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LG G+FG VYK + + +A KV + + E ++L + H N++K+ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-ALEYLHHGHSSAPIVHC 167
+ +++E G+++ + L T ++ ++ L AL YLH I+H
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPL-TESQIQVVCKQTLDALNYLHDNK----IIHR 159
Query: 168 DLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNA 227
DLK NIL + +++DFG+S + + + T +MAP + + K +
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 228 KFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
+ K DV+S G+ L+E + P E+ + LK
Sbjct: 218 DY--------KADVWSLGITLIEMAEIEPPHHELNPMRVLLK 251
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 32/186 (17%)
Query: 44 FNECNLLGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRN 94
+ +G+G+ GIV Y +L NVAIK + RA+R E +++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKC 79
Query: 95 VHHRN---LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+H+N LL +F+ +F+ LV+ELM + +L + LD ER++ ++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDH-ERMSYLL-- 132
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ L + H HS+ I+H DLKPSNI++ + ++ DFG+++ G S T + T
Sbjct: 133 YQMLXGIKHLHSAG-IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 209 IGYMAP 214
Y AP
Sbjct: 189 RYYRAP 194
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 58
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L++ F+D I +I +L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKD-------FMDASALTGIPLPLIKSYLF 110
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 111 QLLQGLAFCHSHR-VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 167
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 168 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 39/236 (16%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVHH 97
E F + +G G++G+VYK V + + K++L S E +L+ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--AL 152
N++K+ + LV E + + L+ F+D I +I +L L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLL 113
Query: 153 EYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
+ L HS ++H DLKP N+L++ +++DFG+++ G T T + T+ Y
Sbjct: 114 QGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 170
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 171 APEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 39/236 (16%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVHH 97
E F + +G G++G+VYK V + + K++L S E +L+ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--AL 152
N++K+ + LV E + + L+ F+D I +I +L L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQLL 112
Query: 153 EYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
+ L HS ++H DLKP N+L++ +++DFG+++ G T T + T+ Y
Sbjct: 113 QGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 169
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 170 APEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 31/266 (11%)
Query: 36 DIQRATEGFNECNLLGTGSFG-IVYKGILSDGNNVAIKVFK----LQLGRAFRSFDSECE 90
+++ + F ++G G+F + + G A+K+ L+ G F E +
Sbjct: 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEV-SCFREERD 113
Query: 91 VLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL 150
VL N R + ++ + + ++ LV+E G L L + + ++ +
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVM 173
Query: 151 ALEYLHH-GHSSAPIVHCDLKPSNILLDENMVARVSDFGIS-KLLGDGEDSVTQTMTMAT 208
A++ +H G+ VH D+KP NILLD R++DFG KL DG +V + + T
Sbjct: 174 AIDSVHRLGY-----VHRDIKPDNILLDRCGHIRLADFGSCLKLRADG--TVRSLVAVGT 226
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP-----TDEMFT 263
Y++P +IL+ G +CD ++ GV E F G+ P T E +
Sbjct: 227 PDYLSP-----EILQAVGGGP-GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG 280
Query: 264 GEISLKN-----WVNESLPHALTDVV 284
+ K V+E +P D +
Sbjct: 281 KIVHYKEHLSLPLVDEGVPEEARDFI 306
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G+ VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DF +++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 133
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVN 190
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 191 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 233
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRL 255
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + L E + + + YLH S
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 132
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVN 189
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 190 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 232
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 233 YEFEDEYFSNTSALAKDFIRRL 254
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 133
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVN 190
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 191 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 233
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRL 255
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 32/186 (17%)
Query: 44 FNECNLLGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRN 94
+ +G+G+ GIV Y IL NVAIK + RA+R E +++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKV 79
Query: 95 VHHRN---LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+H+N LL +F+ + +F+ +V+ELM + +L + LD ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQM 135
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+++LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T
Sbjct: 136 LCGIKHLH----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 209 IGYMAP 214
Y AP
Sbjct: 189 RYYRAP 194
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + L E + + + YLH S
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 132
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVN 189
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 190 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 232
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 233 YEFEDEYFSNTSALAKDFIRRL 254
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVH 96
E F + +G G++G+VYK G VA+K K++L S E +L+ ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 59
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--A 151
H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHV-HQDLKT-------FMDASALTGIPLPLIKSYLFQL 111
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+ L HS ++H DLKP N+L++ +++DFG+++ G T T + T+ Y
Sbjct: 112 LQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 168
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 169 RAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L + F+S E
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSKPFQSIIHAKRTYREL 84
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 142
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D T
Sbjct: 143 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMT 192
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 193 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 232
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 32/186 (17%)
Query: 44 FNECNLLGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRN 94
+ +G+G+ GIV Y IL NVAIK + RA+R E +++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKC 79
Query: 95 VHHRN---LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+H+N LL +F+ + +F+ +V+ELM + +L + LD ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQM 135
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+++LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T
Sbjct: 136 LCGIKHLH----SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 209 IGYMAP 214
Y AP
Sbjct: 189 RYYRAP 194
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 32/186 (17%)
Query: 44 FNECNLLGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRN 94
+ +G+G+ GIV Y +L NVAIK + RA+R E +++
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKC 72
Query: 95 VHHRN---LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+H+N LL +F+ +F+ LV+ELM + +L + LD ER++ ++
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDH-ERMSYLL-- 125
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+ L + H HS+ I+H DLKPSNI++ + ++ DFG+++ G S T + T
Sbjct: 126 YQMLXGIKHLHSAG-IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVT 181
Query: 209 IGYMAP 214
Y AP
Sbjct: 182 RYYRAP 187
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 41/237 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVH 96
E F + +G G++G+VYK G VA+K K++L S E +L+ ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 59
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--A 151
H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 111
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+ Y
Sbjct: 112 LQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 168
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 169 RAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 133
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVN 190
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 191 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 233
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRL 255
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 58
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLF 110
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 111 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 167
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 168 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 58
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLF 110
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 111 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 167
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 168 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 41/237 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVH 96
E F + +G G++G+VYK G VA+K K++L S E +L+ ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 59
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--A 151
H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 111
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+ Y
Sbjct: 112 LQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 168
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 169 RAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 58
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLF 110
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 111 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 167
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 168 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 31/234 (13%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 59
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
++H N++K+ + LV E + S++ + L + I ++ L+
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
L HS ++H DLKP N+L++ +++DFG+++ G T + T+ Y AP
Sbjct: 117 LAFCHSHR-VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 173
Query: 215 VSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
L K+ S + D++S G + E F G D++F
Sbjct: 174 EILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 58
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLF 110
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 111 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 167
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 168 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 113/280 (40%), Gaps = 56/280 (20%)
Query: 47 CNLLGTGSFGIVYKGILSD-GNNVAIKV-----FKLQLGRAFRSFDSECEVLRNVHHRNL 100
C ++G G+F +V + I + G A+K+ F G + E + + H ++
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 101 LKIFSSCSNPDFKALVLELMPNGSL---------ENWLYSH----NYFLDTLERLNIMID 147
+++ + S+ +V E M L ++YS +Y LE
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE------- 141
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILL---DENMVARVSDFGISKLLGDGEDSVTQTM 204
AL Y H + I+H D+KP N+LL + + ++ DFG++ L GE +
Sbjct: 142 ---ALRYCHDNN----IIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGG 192
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP----TDE 260
+ T +MAP +++ K +G DV+ GV+L +G P +
Sbjct: 193 RVGTPHFMAP-----EVV--KREPYGK------PVDVWGCGVILFILLSGCLPFYGTKER 239
Query: 261 MFTGEISLKNWVN-ESLPHALTDVVDANLRVSMKDVAAKL 299
+F G I K +N H D R+ M D A ++
Sbjct: 240 LFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERI 279
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 61
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L++ F+D I +I +L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKD-------FMDASALTGIPLPLIKSYLF 113
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 114 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 170
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 171 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 60
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLF 112
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 113 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 169
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 170 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 32/186 (17%)
Query: 44 FNECNLLGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRN 94
+ +G+G+ GIV Y IL NVAIK + RA+R E +++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKC 79
Query: 95 VHHRN---LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+H+N LL +F+ + +F+ +V+ELM + +L + LD ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQM 135
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMAT 208
+++LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T
Sbjct: 136 LCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 209 IGYMAP 214
Y AP
Sbjct: 189 RYYRAP 194
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 31/234 (13%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 61
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
++H N++K+ + LV E + S++ + L + I ++ L+
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
L HS ++H DLKP N+L++ +++DFG+++ G T + T+ Y AP
Sbjct: 119 LAFCHSHR-VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAP 175
Query: 215 VSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
L K+ S + D++S G + E F G D++F
Sbjct: 176 EILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 59
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLF 111
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 112 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 168
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 169 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 59
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLF 111
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 112 QLLQGLAFCHSHR-VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 168
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 169 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS---HNYFLDTLERLNI 144
E ++L VH R ++ + + LV+ +M G + +Y+ N +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ LE+LH + I++ DLKP N+LLD++ R+SD G++ L G+ T+T
Sbjct: 295 TAQIVSGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ---TKTK 347
Query: 205 TMA-TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
A T G+MAP ++L + F D ++ GV L E + P
Sbjct: 348 GYAGTPGFMAP-----ELLLGEEYDF--------SVDYFALGVTLYEMIAARGP 388
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 62
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLF 114
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 115 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 171
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 172 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 61
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLF 113
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 114 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 170
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 171 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 60
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLF 112
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 113 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 169
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 170 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS---HNYFLDTLERLNI 144
E ++L VH R ++ + + LV+ +M G + +Y+ N +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ LE+LH + I++ DLKP N+LLD++ R+SD G++ L G+ T+T
Sbjct: 295 TAQIVSGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ---TKTK 347
Query: 205 TMA-TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
A T G+MAP ++L + F D ++ GV L E + P
Sbjct: 348 GYAGTPGFMAP-----ELLLGEEYDF--------SVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYS---HNYFLDTLERLNI 144
E ++L VH R ++ + + LV+ +M G + +Y+ N +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 145 MIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
+ LE+LH + I++ DLKP N+LLD++ R+SD G++ L G+ T+T
Sbjct: 295 TAQIVSGLEHLHQRN----IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ---TKTK 347
Query: 205 TMA-TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
A T G+MAP ++L + F D ++ GV L E + P
Sbjct: 348 GYAGTPGFMAP-----ELLLGEEYDF--------SVDYFALGVTLYEMIAARGP 388
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 29/201 (14%)
Query: 75 KLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNY 134
K+ + + F +E +++ ++ + L +N D ++ E M N S+ L Y
Sbjct: 80 KISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI---LKFDEY 136
Query: 135 FLDTLERLNIMIDVWL-------ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDF 187
F + I + + L + H+ I H D+KPSNIL+D+N ++SDF
Sbjct: 137 FFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDF 196
Query: 188 GISKLLGDGEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVL 247
G S+ + D + ++ T +M P + F N AK D++S G+
Sbjct: 197 GESEYMVDKKIKGSR----GTYEFMPP--EFFSNESSYNG---------AKVDIWSLGIC 241
Query: 248 LMETFTGKKPTDEMFTGEISL 268
L F P F+ +ISL
Sbjct: 242 LYVMFYNVVP----FSLKISL 258
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 41/237 (17%)
Query: 42 EGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRNVH 96
E F + +G G++G+VYK G VA+K K++L S E +L+ ++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 61
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL--A 151
H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLFQL 113
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+ Y
Sbjct: 114 LQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWY 170
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
AP L K+ S + D++S G + E F G D++F
Sbjct: 171 RAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 28/222 (12%)
Query: 44 FNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRSFDS---ECEVLRNVHHRN 99
F + +LG G FG V+ + + G A K + + + + E ++L VH R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYS---HNYFLDTLERLNIMIDVWLALEYLH 156
++ + + LV+ +M G + +Y+ N + + LE+LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA-TIGYMAPV 215
+ I++ DLKP N+LLD++ R+SD G++ L G+ T+T A T G+MAP
Sbjct: 307 QRN----IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ---TKTKGYAGTPGFMAP- 358
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
++L + F D ++ GV L E + P
Sbjct: 359 ----ELLLGEEYDF--------SVDYFALGVTLYEMIAARGP 388
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 60
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLF 112
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 113 QLLQGLAFCHSHR-VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 169
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 170 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 61
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK-------FMDASALTGIPLPLIKSYLF 113
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 114 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 170
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 171 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+LEL+ G L ++L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 133
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVN 190
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 191 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 233
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRL 255
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 61
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKT-------FMDASALTGIPLPLIKSYLF 113
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 114 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 170
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 171 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y +L NVAIK + RA+R E +++ V+H+N
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKXVNHKNI 85
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ +F+ LV+ELM N LD ++ + +++
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 142 LH----SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 194
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 60
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L++ F+D I +I +L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKD-------FMDASALTGIPLPLIKSYLF 112
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 113 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 169
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 170 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 114/276 (41%), Gaps = 42/276 (15%)
Query: 44 FNECNLLGTGSFG-IVYKGILSDGNNVAIKVFKLQL---GRAFRSFDSECEVL-RNVHHR 98
F+ ++G GSFG ++ ++ A+KV + + + + SE VL +NV H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
L+ + S D VL+ + G L L FL+ R ++ AL YLH
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH-- 156
Query: 159 HSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV--- 215
S IV+ DLKP NILLD ++DFG+ K + E + T + T Y+AP
Sbjct: 157 --SLNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP-----TDEMF----TGEI 266
Q +D D + G +L E G P T EM+ +
Sbjct: 213 KQPYD----------------RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL 256
Query: 267 SLKNWVNESLPHALTDVV--DANLRVSMKDVAAKLK 300
LK + S H L ++ D R+ KD ++K
Sbjct: 257 QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIK 292
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 95
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 153
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ DFG+++ D
Sbjct: 154 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMX 203
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 204 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 243
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 23/223 (10%)
Query: 42 EGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAF---RSFDSECEVLRNVHH 97
E ++ LG G+ G V + VA+K+ ++ RA + E + + ++H
Sbjct: 6 EDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMK--RAVDCPENIKKEICINKMLNH 63
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N++K + + + L LE G L + + + + + + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
I H D+KP N+LLDE ++SDFG++ + T+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP--- 175
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
++LK + +F +E + DV+S G++L G+ P D+
Sbjct: 176 --ELLKRR--EFHAEPV-----DVWSCGIVLTAMLAGELPWDQ 209
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 50 LGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD------SECEVLRNV-HHRNLL 101
LG G+FG +V G A+ +++ ++ D SE +++ ++ H N++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLY---------SHNYFLDTLERLNIMIDVWLAL 152
+ +C++ ++ E G L N+L L+ + L+ V +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 153 EYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
+L +S +H D+ N+LL VA++ DFG+++ + + + + + + +M
Sbjct: 166 AFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 221
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
AP S +FD + + + DV+S+G+LL E F+
Sbjct: 222 APES-IFDC------------VYTVQSDVWSYGILLWEIFS 249
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y IL NVAIK + RA+R E +++ V+H+N
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 85
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ + +F+ +V+ELM N LD ++ + +++
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 142 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPEVVTRYYRAP 194
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 26/225 (11%)
Query: 39 RATEGFNECNLLGTGSFGIVYK--GILSDGNNVAIKVFKLQL-GRAFRSFDSECEVLRNV 95
R TE + LG G+F +V + +L+ A+ + +L R + + E + R +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 96 HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
H N++++ S S L+ +L+ G L + + Y+ + I LE +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ----QILEAV 123
Query: 156 HHGHSSAPIVHCDLKPSNILLDENM---VARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
H H +VH +LKP N+LL + +++DFG++ + +GE T GY+
Sbjct: 124 LHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFA-GTPGYL 180
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP 257
+P ++L + +G D+++ GV+L G P
Sbjct: 181 SP-----EVL--RKDPYGK------PVDLWACGVILYILLVGYPP 212
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 43/220 (19%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVFKLQLGRAFRSF------DSECEVLRNVHHRN- 99
+G+G++G V Y L VA+K +L R F+S E +L+++ H N
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 100 --LLKIFSSCSN-PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-ALEYL 155
LL +F+ ++ DF + L G+ N + D E + ++ L L+Y+
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSD--EHVQFLVYQLLRGLKYI 147
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
H SA I+H DLKPSN+ ++E+ R+ DFG+++ D E T +AT Y AP
Sbjct: 148 H----SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-QADEE----MTGYVATRWYRAPE 198
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
L N ++ + D++S G ++ E GK
Sbjct: 199 IML-------NWMHYNQTV-----DIWSVGCIMAELLQGK 226
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 50 LGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFD------SECEVLRNV-HHRNLL 101
LG G+FG +V G A+ +++ ++ D SE +++ ++ H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLY---------SHNYFLDTLERLNIMIDVWLAL 152
+ +C++ ++ E G L N+L L+ + L+ V +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 153 EYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
+L +S +H D+ N+LL VA++ DFG+++ + + + + + + +M
Sbjct: 174 AFL----ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 229
Query: 213 APVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
AP S +FD + + + DV+S+G+LL E F+
Sbjct: 230 APES-IFDC------------VYTVQSDVWSYGILLWEIFS 257
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 29/224 (12%)
Query: 39 RATEGFNECNLLGTGSFGIVYKGIL----SDGNNVAIKVFKLQLGRAFRSFDS--ECEVL 92
++ E + +G GSFG K IL DG IK + + +S E VL
Sbjct: 21 QSMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL 77
Query: 93 RNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLER-LNIMIDVWLA 151
N+ H N+++ S +V++ G L + + L ++ L+ + + LA
Sbjct: 78 ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA 137
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L+++H I+H D+K NI L ++ ++ DFGI+++L T + A IG
Sbjct: 138 LKHVH----DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-----TVELARACIGT 188
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+S KP N K D+++ G +L E T K
Sbjct: 189 PYYLSPEICENKPYN----------NKSDIWALGCVLYELCTLK 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y +L NVAIK + RA+R E +++ V+H+N
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 123
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ +F+ LV+ELM N LD ++ + +++
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 179
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 180 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 232
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 43/220 (19%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVFKLQLGRAFRSF------DSECEVLRNVHHRN- 99
+G+G++G V Y L VA+K +L R F+S E +L+++ H N
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 81
Query: 100 --LLKIFSSCSN-PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-ALEYL 155
LL +F+ ++ DF + L G+ N + D E + ++ L L+Y+
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSD--EHVQFLVYQLLRGLKYI 139
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
H SA I+H DLKPSN+ ++E+ R+ DFG+++ D E T +AT Y AP
Sbjct: 140 H----SAGIIHRDLKPSNVAVNEDCELRILDFGLAR-QADEE----MTGYVATRWYRAPE 190
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
L N ++ + D++S G ++ E GK
Sbjct: 191 IML-------NWMHYNQTV-----DIWSVGCIMAELLQGK 218
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ FG+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y IL NVAIK + RA+R E +++ V+H+N
Sbjct: 33 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 86
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ + +F+ +V+ELM N LD ++ + +++
Sbjct: 87 IGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 143 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 195
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y IL NVAIK + RA+R E +++ V+H+N
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 85
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ + +F+ +V+ELM N LD ++ + +++
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 142 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 194
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y IL NVAIK + RA+R E +++ V+H+N
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 85
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ + +F+ +V+ELM N LD ++ + +++
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 142 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 194
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y +L NVAIK + RA+R E +++ V+H+N
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 123
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ +F+ LV+ELM N LD ++ + +++
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 179
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 180 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 232
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y +L NVAIK + RA+R E +++ V+H+N
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 85
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ +F+ LV+ELM N LD ++ + +++
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 142 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 194
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ D G+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y IL NVAIK + RA+R E +++ V+H+N
Sbjct: 37 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 90
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ + +F+ +V+ELM N LD ++ + +++
Sbjct: 91 IGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 146
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 147 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 199
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y +L NVAIK + RA+R E +++ V+H+N
Sbjct: 33 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 86
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ +F+ LV+ELM N LD ++ + +++
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 143 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 195
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y +L NVAIK + RA+R E +++ V+H+N
Sbjct: 26 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 79
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ +F+ LV+ELM N LD ++ + +++
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 136 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 188
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y +L NVAIK + RA+R E +++ V+H+N
Sbjct: 33 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 86
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ +F+ LV+ELM N LD ++ + +++
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 143 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 195
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y +L NVAIK + RA+R E +++ V+H+N
Sbjct: 26 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 79
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ +F+ LV+ELM N LD ++ + +++
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 136 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 188
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y +L NVAIK + RA+R E +++ V+H+N
Sbjct: 31 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 84
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ +F+ LV+ELM N LD ++ + +++
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 140
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 141 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 193
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y IL NVAIK + RA+R E +++ V+H+N
Sbjct: 26 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 79
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ + +F+ +V+ELM N LD ++ + +++
Sbjct: 80 IGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 136 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 188
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y +L NVAIK + RA+R E +++ V+H+N
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 85
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ +F+ LV+ELM N LD ++ + +++
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 142 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 194
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 27/227 (11%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNN-VAIKVFKLQ---LGRAFRSFDSECEVLRNVHH 97
+ + + +G G++G V+K + + VA+K +L G + C +L+ + H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKH 60
Query: 98 RNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+N++++ + LV E + L+ + S N LD + + + L + H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH- 118
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQ 217
S ++H DLKP N+L++ N ++++FG+++ G + Y A V
Sbjct: 119 ---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFG-----------IPVRCYSAEVVT 164
Query: 218 LFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTG 264
L+ +P + FG++ + S D++S G + E +P +F G
Sbjct: 165 LW--YRPPDVLFGAK-LYSTSIDMWSAGCIFAELANAGRP---LFPG 205
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ D G+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y +L NVAIK + RA+R E +++ V+H+N
Sbjct: 25 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 78
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ +F+ LV+ELM N LD ++ + +++
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 134
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S T + T Y AP
Sbjct: 135 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 187
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 43/220 (19%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVFKLQLGRAFRSF------DSECEVLRNVHHRN- 99
+G+G++G V Y L VA+K +L R F+S E +L+++ H N
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVK----KLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 100 --LLKIFSSCSN-PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-ALEYL 155
LL +F+ ++ DF + L G+ N + D E + ++ L L+Y+
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSD--EHVQFLVYQLLRGLKYI 147
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPV 215
H SA I+H DLKPSN+ ++E+ R+ DFG+++ D E T +AT Y AP
Sbjct: 148 H----SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-QADEE----MTGYVATRWYRAPE 198
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
L N ++ + D++S G ++ E GK
Sbjct: 199 IML-------NWMHYNQTV-----DIWSVGCIMAELLQGK 226
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGILS-DGNNVAIKVFKLQLGRAFRSFDS----ECEVLRN 94
+ E F + +G G++G+VYK G VA+K K++L S E +L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKE 61
Query: 95 VHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNI---MIDVWL- 150
++H N++K+ + LV E + + L+ F+D I +I +L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKK-------FMDASALTGIPLPLIKSYLF 113
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
L+ L HS ++H DLKP N+L++ +++DFG+++ G T + T+
Sbjct: 114 QLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 170
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEMF 262
Y AP L K+ S + D++S G + E F G D++F
Sbjct: 171 WYRAPEILL-------GCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 44 FNECNLLGTGSFGIVYKGILS-DGNNVAIK----VFKLQL--GRAFRSFDSECEVLRNVH 96
+ + +G+G++G V + G VAIK F+ +L RA+R E +L+++
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR----ELRLLKHMR 82
Query: 97 HRN---LLKIFSSCSN-PDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-A 151
H N LL +F+ DF L + G+ L H + +R+ ++ L
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGE--DRIQFLVYQMLKG 140
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGY 211
L Y+H +A I+H DLKP N+ ++E+ ++ DFG+++ D E + T Y
Sbjct: 141 LRYIH----AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-QADSE----MXGXVVTRWY 191
Query: 212 MAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
AP + + ++ + D++S G ++ E TGK
Sbjct: 192 RAP-EVILNWMR-----------YTQTVDIWSVGCIMAEMITGK 223
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 42 EGFNECNLLGTGSFGIVYKGI--LSDGNNVAIKVFKLQLGR-AFRSFDSECEVLRNVHHR 98
E + + + LG G++ VYKG L+D N VA+K +L+ A + E +L+++ H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTD-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 99 NLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHG 158
N++ + LV E + + L+ +L ++ + + L Y H
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR- 118
Query: 159 HSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
++H DLKP N+L++E +++DFG+++ ++ T Y V L
Sbjct: 119 ---QKVLHRDLKPQNLLINERGELKLADFGLAR-----------AKSIPTKTYDNEVVTL 164
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+ +P + GS S + D++ G + E TG+
Sbjct: 165 W--YRPPDILLGSTD-YSTQIDMWGVGCIFYEMATGR 198
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LGTG+FG+V++ + GNN A K + E + + + H L+ + +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+ + ++ E M G L + + + E + M V L ++H + VH D
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN----YVHLD 280
Query: 169 LKPSNILLDENMVARVS--DFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LKP NI+ + DFG++ L D + SV +T T + AP
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSV--KVTTGTAEFAAP 325
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 50 LGTGSFGIVYKGILSD---GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS 106
LG GSFG V++ + D G A+K +L++ RA E + ++ ++ +
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRA-----EELMACAGLTSPRIVPLYGA 153
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
+ + +EL+ GSL L L L + LEYLH S I+H
Sbjct: 154 VREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYYLGQALEGLEYLH----SRRILH 208
Query: 167 CDLKPSNILLDENMV-ARVSDFGISKLL---GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
D+K N+LL + A + DFG + L G G+ +T T +MAP +++
Sbjct: 209 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAP-----EVV 263
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
++ AK DV+S +++ G P + F G + LK
Sbjct: 264 LGRS--------CDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 302
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 101/245 (41%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 73
Query: 99 NLLKIFSSCSNPDFKALVLELM-PNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE M P L +++ + L R W LE + H
Sbjct: 74 GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 129
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 130 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 184
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 185 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 232
Query: 274 ESLPH 278
H
Sbjct: 233 SECQH 237
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 37 IQRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSF------DSEC 89
I E + + +G+G++G V G VA+K +L R F+S E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK----KLSRPFQSIIHAKRTYREL 72
Query: 90 EVLRNVHHRN---LLKIFSSC-SNPDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLN 143
+L+++ H N LL +F+ S +F LV LM L N + D ++ L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL- 130
Query: 144 IMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQT 203
+ + L+Y+H SA I+H DLKPSN+ ++E+ ++ D G+++ D T
Sbjct: 131 -IYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD-----EMT 180
Query: 204 MTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
+AT Y AP L N ++ + D++S G ++ E TG+
Sbjct: 181 GYVATRWYRAPEIML-------NWMHYNQTV-----DIWSVGCIMAELLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 56/226 (24%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G+G++G V I G VAIK +L R F+S E+ +R LL +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIK----KLSRPFQS-----EIFAKRAYRELL-LLKHMQ 81
Query: 109 NPDFKALVLELMPNGSLENW--LYSHNYFLDT-----------LERLNIMIDVWL-ALEY 154
+ + L+ P SL N+ Y F+ T E++ ++ L L+Y
Sbjct: 82 HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKY 141
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
+H SA +VH DLKP N+ ++E+ ++ DFG+++ D E T + T Y AP
Sbjct: 142 IH----SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-HADAE----MTGYVVTRWYRAP 192
Query: 215 VSQLFDILKPKNAKFGSEGIIS-----AKCDVYSFGVLLMETFTGK 255
E I+S D++S G ++ E TGK
Sbjct: 193 -----------------EVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
+S +H DL NILL E V ++ DFG+++ + D V + + +MAP + +F
Sbjct: 208 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET-IF 266
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
D + + + DV+SFGVLL E F+ G P
Sbjct: 267 D------------RVYTIQSDVWSFGVLLWEIFSLGASP 293
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS 131
+ +C+ P +V+ E G+L +L S
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 118
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
+S +H DL NILL E V ++ DFG+++ + D V + + +MAP + +F
Sbjct: 210 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET-IF 268
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
D + + + DV+SFGVLL E F+ G P
Sbjct: 269 D------------RVYTIQSDVWSFGVLLWEIFSLGASP 295
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS 131
+ +C+ P +V+ E G+L +L S
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 120
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
LGTG+FG+V++ + GNN A K + E + + + H L+ + +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 109 NPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVHCD 168
+ + ++ E M G L + + + E + M V L ++H + VH D
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN----YVHLD 174
Query: 169 LKPSNILLDENMVARVS--DFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LKP NI+ + DFG++ L D + SV +T T + AP
Sbjct: 175 LKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSV--KVTTGTAEFAAP 219
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
+S +H DL NILL E V ++ DFG+++ + D V + + +MAP + +F
Sbjct: 215 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET-IF 273
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
D + + + DV+SFGVLL E F+ G P
Sbjct: 274 D------------RVYTIQSDVWSFGVLLWEIFSLGASP 300
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS 131
+ +C+ P +V+ E G+L +L S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 125
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
+S +H DL NILL E V ++ DFG+++ + D V + + +MAP + +F
Sbjct: 217 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET-IF 275
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
D + + + DV+SFGVLL E F+ G P
Sbjct: 276 D------------RVYTIQSDVWSFGVLLWEIFSLGASP 302
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 50 LGTGSFGIVYK----GI--LSDGNNVAIKVFKLQLGRA-FRSFDSECEVLRNV-HHRNLL 101
LG G+FG V + GI + VA+K+ K + R+ SE ++L ++ HH N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 102 KIFSSCSNPDFKALVL-ELMPNGSLENWLYS 131
+ +C+ P +V+ E G+L +L S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 127
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 56/226 (24%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCS 108
+G+G++G V I G VAIK +L R F+S E+ +R LL +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIK----KLSRPFQS-----EIFAKRAYRELL-LLKHMQ 99
Query: 109 NPDFKALVLELMPNGSLENW--LYSHNYFLDT-----------LERLNIMIDVWL-ALEY 154
+ + L+ P SL N+ Y F+ T E++ ++ L L+Y
Sbjct: 100 HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKY 159
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
+H SA +VH DLKP N+ ++E+ ++ DFG+++ D E T + T Y AP
Sbjct: 160 IH----SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-HADAE----MTGYVVTRWYRAP 210
Query: 215 VSQLFDILKPKNAKFGSEGIIS-----AKCDVYSFGVLLMETFTGK 255
E I+S D++S G ++ E TGK
Sbjct: 211 -----------------EVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 106/262 (40%), Gaps = 37/262 (14%)
Query: 50 LGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFR------SFDSECEVLRNVHHRNLLK 102
LG+G F +V K S G A K K + ++ R + E +L+ + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSA 162
+ N L+ EL+ G L ++L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH----SL 133
Query: 163 PIVHCDLKPSNI-LLDENMVA---RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQL 218
I H DLKP NI LLD N+ ++ DFG++ + G + T ++AP
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPEFVAPEIVN 190
Query: 219 FDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVNES-LP 277
++ L + D++S GV+ +G P F G+ + N S +
Sbjct: 191 YEPL-------------GLEADMWSIGVITYILLSGASP----FLGDTKQETLANVSAVN 233
Query: 278 HALTDVVDANLRVSMKDVAAKL 299
+ D +N KD +L
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRL 255
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 91/230 (39%), Gaps = 50/230 (21%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSD-GNNVAIKVFKLQLGRAFRSFDS---------ECEV 91
E + + +G GS+G+V+K D G VAIK F S D E +
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-------LESEDDPVIKKIALREIRM 55
Query: 92 LRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID---- 147
L+ + H NL+ + LV E Y + L L+R +
Sbjct: 56 LKQLKHPNLVNLLEVFRRKRRLHLVFE-----------YCDHTVLHELDRYQRGVPEHLV 104
Query: 148 ---VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
W L+ ++ H +H D+KP NIL+ ++ V ++ DFG ++LL D
Sbjct: 105 KSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD-- 161
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTG 254
+AT Y +P + D ++G DV++ G + E +G
Sbjct: 162 EVATRWYRSPELLVGD------TQYG------PPVDVWAIGCVFAELLSG 199
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 22/172 (12%)
Query: 39 RATEGFNECNLLGTGSFGIVYKGILSDGN-NVAIKVFKLQLGRAFRSFDSECEVLRNVHH 97
+ + + +L+G GS+G VY + N NVAIK ++ R F +LR +
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIK----KVNRMFEDLIDCKRILREITI 80
Query: 98 RNLLK-----------IFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMI 146
N LK I D +VLE+ + L+ L+ FL I+
Sbjct: 81 LNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIA-DSDLKK-LFKTPIFLTEQHVKTILY 138
Query: 147 DVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGED 198
++ L +++H + I+H DLKP+N LL+++ ++ DFG+++ + +D
Sbjct: 139 NLLLGEKFIH----ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKD 186
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 25 YTNLSYIGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 79
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 136
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 137 LKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 193 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 29/160 (18%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y IL NVAIK + RA+R E +++ V+H+N
Sbjct: 34 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 87
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ + +F+ +V+ELM N LD ++ + +++
Sbjct: 88 IGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 143
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLG 194
LH SA I+H DLKPSNI++ + ++ DFG+++ G
Sbjct: 144 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 179
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 24/182 (13%)
Query: 49 LLGTGSFGIVYKGILSDGNNVAIK-VFK-LQLGRAFRSFDS---------ECEVLRNVHH 97
+ +GS+G V G+ S+G VAIK VF + GR E +L + HH
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 98 RNLL---KIFSSCSNPDFKALVL--ELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLAL 152
N+L IF P L L ELM L ++ + M + L L
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 153 EYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYM 212
LH A +VH DL P NILL +N + DF +++ D D+ +T + Y
Sbjct: 148 HVLH----EAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADA-NKTHYVTHRWYR 200
Query: 213 AP 214
AP
Sbjct: 201 AP 202
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 25 YTNLSYIGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 79
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 136
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 137 LKYIH----SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 193 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y IL NVAIK + RA+R E +++ V+H+N
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 85
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ + +F+ +V+ELM N LD ++ + +++
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S + T Y AP
Sbjct: 142 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTRYYRAP 194
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 25 YTNLSYIGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 79
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 136
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 137 LKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 193 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 32/180 (17%)
Query: 50 LGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRNVHHRN- 99
+G+G+ GIV Y IL NVAIK + RA+R E +++ V+H+N
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR----ELVLMKCVNHKNI 85
Query: 100 --LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEY 154
LL +F+ + +F+ +V+ELM N LD ++ + +++
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 155 LHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
LH SA I+H DLKPSNI++ + ++ DFG+++ G S + T Y AP
Sbjct: 142 LH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTRYYRAP 194
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 67/159 (42%), Gaps = 21/159 (13%)
Query: 49 LLGTGSFGIVYKGILSDGNNVAIK-VFK-LQLGRAFRSFDS---------ECEVLRNVHH 97
+ +GS+G V G+ S+G VAIK VF + GR E +L + HH
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 98 RNLL---KIFSSCSNPDFKALVL--ELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLAL 152
N+L IF P L L ELM L ++ + M + L L
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 153 EYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISK 191
LH A +VH DL P NILL +N + DF +++
Sbjct: 148 HVLH----EAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 25 YTNLSYIGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 79
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 136
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 137 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 193 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 29 YTNLSYIGEGAYGMVCSA-YDNLNKVRVAIRKISPFEHQTYCQRTLR----EIKILLRFR 83
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 140
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 141 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 197 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 29 YTNLSYIGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYXQRTLR----EIKILLRFR 83
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 140
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 141 LKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 197 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 29 YTNLSYIGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 83
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 140
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 141 LKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 197 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 27 YTNLSYIGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 81
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 138
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 139 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 195 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 239
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 33 YTNLSYIGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 87
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 144
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 145 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 201 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 245
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 25 YTNLSYIGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 79
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 136
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 137 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 193 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 45 YTNLSYIGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 99
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 156
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 157 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 213 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 30 YTNLSYIGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 84
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 141
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 142 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 198 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 242
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 31 YTNLSYIGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 85
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 142
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 143 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 199 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 243
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 22 YTNLSYIGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 76
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 133
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 134 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 190 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 234
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 29 YTNLSYIGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 83
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 140
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 141 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 197 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 23 YTNLSYIGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 77
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 134
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 135 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 191 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 235
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 53/248 (21%)
Query: 49 LLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEV--------LRNVHHRN 99
+LG GS G +V++G G VA+K R F C++ + H N
Sbjct: 22 ILGYGSSGTVVFQGSFQ-GRPVAVK-------RMLIDF---CDIALMEIKLLTESDDHPN 70
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLE------RLNIMIDVWLALE 153
+++ + S + F + LEL N +L++ + S N + L+ ++++ + +
Sbjct: 71 VIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-------------ENMVARVSDFGISKLLGDGEDSV 200
+LH S I+H DLKP NIL+ EN+ +SDFG+ K L G+ S
Sbjct: 130 HLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 201 TQTMT--MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ T G+ AP ++L+ N ++ ++ D++S G + + GK P
Sbjct: 186 RTNLNNPSGTSGWRAP-----ELLEESN-NLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 258 TDEMFTGE 265
+ ++ E
Sbjct: 240 FGDKYSRE 247
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 142 LNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT 201
L+I I + A+E+LH S ++H DLKPSNI + V +V DFG+ + E+
Sbjct: 167 LHIFIQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE-- 220
Query: 202 QTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
QT+ Y Q+ L + S K D++S G++L E
Sbjct: 221 QTVLTPMPAYATHXGQVGTKLYMSPEQIHGNN-YSHKVDIFSLGLILFE 268
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 23 YTNLSYIGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 77
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 134
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 135 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 191 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 235
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 85/163 (52%), Gaps = 29/163 (17%)
Query: 44 FNECNLLGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRN 94
+ + +G+G+ GIV + +L G NVA+K + RA+R E +L+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYR----ELVLLKC 77
Query: 95 VHHRN---LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+H+N LL +F+ +F+ LV+ELM + +L ++ LD ++ +
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQM 133
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISK 191
+++LH SA I+H DLKPSNI++ + ++ DFG+++
Sbjct: 134 LCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 24/223 (10%)
Query: 53 GSFGIVYKGILSDGNNVAI-KVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSCSNPD 111
G FG VYK + + +A KV + + E ++L + H N++K+ + +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 112 FKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-ALEYLHHGHSSAPIVHCDLK 170
+++E G+++ + L T ++ ++ L AL YLH I+H DLK
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPL-TESQIQVVCKQTLDALNYLHDNK----IIHRDLK 135
Query: 171 PSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT----MATIGYMAPVSQLFDILKPKN 226
NIL + +++DFG+S +++ T + T +MAP + + K +
Sbjct: 136 AGNILFTLDGDIKLADFGVS-----AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP 190
Query: 227 AKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
+ K DV+S G+ L+E + P E+ + LK
Sbjct: 191 YDY--------KADVWSLGITLIEMAEIEPPHHELNPMRVLLK 225
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 43/238 (18%)
Query: 50 LGTGSFGIV-----YKGILSDGN-NVAIKVFKLQLGRAFR-SFDSECEVLRNV-HHRNLL 101
LG G+FG V Y I SD VA+K+ K R + SE +VL + +H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLY-SHNYFLDTLERLNIM--------------- 145
+ +C+ ++ E G L N+L + F+ + IM
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 146 -IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V + +L +S +H DL NILL + ++ DFG+++ + + + V +
Sbjct: 174 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEM 261
+ +MAP S +F+ + + + DV+S+G+ L E F+ G P M
Sbjct: 230 ARLPVKWMAPES-IFNC------------VYTFESDVWSYGIFLWELFSLGSSPYPGM 274
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 27 YTNLSYIGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFR 81
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 138
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 139 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 195 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 239
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 46/239 (19%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNN-VAIKVFKLQ------LGRAFRSFDSECEVLRNVH 96
+ LG G++G VYK I + N VAIK +L+ G A R E +L+ +
Sbjct: 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR----EVSLLKELQ 91
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERL--NIMIDVWLALEY 154
HRN++++ S + L+ E N L+ ++ + D R+ + + + + +
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNP---DVSMRVIKSFLYQLINGVNF 147
Query: 155 LHHGHSSAPIVHCDLKPSNILL-----DENMVARVSDFGISKLLGDGEDSVTQTMTMATI 209
H S +H DLKP N+LL E V ++ DFG+++ G T + T+
Sbjct: 148 CH----SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII--TL 201
Query: 210 GYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYS----FGVLLMET--FTGKKPTDEMF 262
Y P +IL GS S D++S + +LM+T F G D++F
Sbjct: 202 WYRPP-----EIL------LGSRH-YSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF 248
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 85/163 (52%), Gaps = 29/163 (17%)
Query: 44 FNECNLLGTGSFGIV---YKGILSDGNNVAIKVF------KLQLGRAFRSFDSECEVLRN 94
+ + +G+G+ GIV + +L G NVA+K + RA+R E +L+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYR----ELVLLKC 79
Query: 95 VHHRN---LLKIFSSCSN-PDFK--ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
V+H+N LL +F+ +F+ LV+ELM + +L ++ LD ++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQM 135
Query: 149 WLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISK 191
+++LH SA I+H DLKPSNI++ + ++ DFG+++
Sbjct: 136 LCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 43/238 (18%)
Query: 50 LGTGSFGIV-----YKGILSDGN-NVAIKVFKLQLGRAFR-SFDSECEVLRNV-HHRNLL 101
LG G+FG V Y I SD VA+K+ K R + SE +VL + +H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLY-SHNYFLDTLERLNIM--------------- 145
+ +C+ ++ E G L N+L + F+ + IM
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 146 -IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V + +L +S +H DL NILL + ++ DFG+++ + + + V +
Sbjct: 167 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEM 261
+ +MAP S +F+ + + + DV+S+G+ L E F+ G P M
Sbjct: 223 ARLPVKWMAPES-IFNC------------VYTFESDVWSYGIFLWELFSLGSSPYPGM 267
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 18/165 (10%)
Query: 48 NLLGTGSFGIVYKGILS-DGNNVAIK----VFK--LQLGRAFRSFDSECEVLRNVHHRNL 100
+L+GTGS+G V + + VAIK VF+ + R R E +L ++H ++
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR----EIAILNRLNHDHV 114
Query: 101 LKIFSSCSNPD---FKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
+K+ D F L + L S L+ +L L ++ ++ + ++Y+H
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH- 173
Query: 158 GHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQ 202
SA I+H DLKP+N L++++ +V DFG+++ + E+ +Q
Sbjct: 174 ---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQ 215
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 47/239 (19%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 45 YTNLSYIGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 99
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYF--LDTLERLNIMIDVWL---- 150
H N++ I N +A +E M + L L + + L T N I +L
Sbjct: 100 HENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 151 -ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMAT 208
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 155 RGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 211 RWYRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 27 YTNLSYIGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFR 81
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 138
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 139 LKYIH----SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 195 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 239
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 50/234 (21%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIK-VF-----KLQLGRAFRSFDSECEVLRNVHHRNLLK 102
LG G++GIV+K I G VA+K +F R FR E+ + + NLL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 103 IFSSCSNPDFKALVLELMPNGSLENWLYS--HNYFLDTLERLNIMIDVWLALEYLHHGHS 160
+ + ++ D LV + M E L++ L+ + + ++ + ++YLH G
Sbjct: 77 VLRADNDRDV-YLVFDYM-----ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG-- 128
Query: 161 SAPIVHCDLKPSNILLDENMVARVSDFGISKLLGD-------------------GEDSVT 201
++H D+KPSNILL+ +V+DFG+S+ + +D
Sbjct: 129 --GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 202 QTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
T +AT Y AP +IL GS D++S G +L E GK
Sbjct: 187 LTDYVATRWYRAP-----EIL------LGSTKYTKG-IDMWSLGCILGEILCGK 228
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 43/238 (18%)
Query: 50 LGTGSFGIV-----YKGILSDGN-NVAIKVFKLQLGRAFR-SFDSECEVLRNV-HHRNLL 101
LG G+FG V Y I SD VA+K+ K R + SE +VL + +H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLY-SHNYFLDTLERLNIM--------------- 145
+ +C+ ++ E G L N+L + F+ + IM
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 146 -IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V + +L +S +H DL NILL + ++ DFG+++ + + + V +
Sbjct: 151 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEM 261
+ +MAP S +F+ + + + DV+S+G+ L E F+ G P M
Sbjct: 207 ARLPVKWMAPES-IFNC------------VYTFESDVWSYGIFLWELFSLGSSPYPGM 251
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 43/238 (18%)
Query: 50 LGTGSFGIV-----YKGILSDGN-NVAIKVFKLQLGRAFR-SFDSECEVLRNV-HHRNLL 101
LG G+FG V Y I SD VA+K+ K R + SE +VL + +H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLY-SHNYFLDTLERLNIM--------------- 145
+ +C+ ++ E G L N+L + F+ + IM
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 146 -IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V + +L +S +H DL NILL + ++ DFG+++ + + + V +
Sbjct: 174 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEM 261
+ +MAP S +F+ + + + DV+S+G+ L E F+ G P M
Sbjct: 230 ARLPVKWMAPES-IFNC------------VYTFESDVWSYGIFLWELFSLGSSPYPGM 274
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 43/238 (18%)
Query: 50 LGTGSFGIV-----YKGILSDGN-NVAIKVFKLQLGRAFR-SFDSECEVLRNV-HHRNLL 101
LG G+FG V Y I SD VA+K+ K R + SE +VL + +H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 102 KIFSSCSNPDFKALVLELMPNGSLENWLY-SHNYFLDTLERLNIM--------------- 145
+ +C+ ++ E G L N+L + F+ + IM
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 146 -IDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTM 204
V + +L +S +H DL NILL + ++ DFG+++ + + + V +
Sbjct: 169 SYQVAKGMAFL----ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 205 TMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKPTDEM 261
+ +MAP S +F+ + + + DV+S+G+ L E F+ G P M
Sbjct: 225 ARLPVKWMAPES-IFNC------------VYTFESDVWSYGIFLWELFSLGSSPYPGM 269
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 27/224 (12%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNV-AIKVFKLQLGRAFRSFD---SECEVLRNVHH 97
+ F+ ++G GS+ V L + + A+KV K +L D +E V +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 98 RNLLKIFSSCSNPDFKAL-VLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH 156
L SC + + V+E + G L + + R ++ LAL YLH
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 138
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKL-LGDGEDSVTQTMTMATIGYMAPV 215
I++ DLK N+LLD +++D+G+ K L G+ T + T Y+AP
Sbjct: 139 E----RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAP- 190
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
+IL+ ++ F D ++ GVL+ E G+ P D
Sbjct: 191 ----EILRGEDYGFS--------VDWWALGVLMFEMMAGRSPFD 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 27/224 (12%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNV-AIKVFKLQLGRAFRSFD---SECEVLRNVHH 97
+ F+ ++G GS+ V L + + A+KV K +L D +E V +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 98 RNLLKIFSSCSNPDFKAL-VLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH 156
L SC + + V+E + G L + + R ++ LAL YLH
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 123
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKL-LGDGEDSVTQTMTMATIGYMAPV 215
I++ DLK N+LLD +++D+G+ K L G+ T + T Y+AP
Sbjct: 124 ----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAP- 175
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
+IL+ ++ F D ++ GVL+ E G+ P D
Sbjct: 176 ----EILRGEDYGFS--------VDWWALGVLMFEMMAGRSPFD 207
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Query: 160 SSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVSQLF 219
+S +H D+ N+LL VA++ DFG+++ + + + + + + +MAP S +F
Sbjct: 175 ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPES-IF 233
Query: 220 DILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT 253
D + + + DV+S+G+LL E F+
Sbjct: 234 DC------------VYTVQSDVWSYGILLWEIFS 255
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 32/227 (14%)
Query: 50 LGTGSFGIVYKGILSD---GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS 106
LG GSFG V++ + D G A+K +L++ R E + ++ ++ +
Sbjct: 80 LGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRV-----EELVACAGLSSPRIVPLYGA 132
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
+ + +EL+ GSL L L L + LEYLH + I+H
Sbjct: 133 VREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLH----TRRILH 187
Query: 167 CDLKPSNILLD-ENMVARVSDFGISKLL---GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
D+K N+LL + A + DFG + L G G+ +T T +MAP +
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG--- 244
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
KP +AK D++S +++ G P + F G + LK
Sbjct: 245 KPCDAKV----------DIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 281
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 74
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 130
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 131 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 185
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 186 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
Query: 274 ESLPH 278
H
Sbjct: 234 SECQH 238
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 72
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 73 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 128
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 129 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 183
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 184 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 231
Query: 274 ESLPH 278
H
Sbjct: 232 SECQH 236
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 47/239 (19%)
Query: 44 FNECNLLGTGSFGIV---YKGILSDGNNVAIK---VFKLQL--GRAFRSFDSECEVLRNV 95
+ + +G G++G+V Y + VAIK F+ Q R R E ++L
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRK--TRVAIKKISPFEHQTYCQRTLR----EIQILLRF 98
Query: 96 HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL----- 150
H N++ I +A+ + +E LY L + + N I +L
Sbjct: 99 RHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK---LLKSQQLSNDHICYFLYQILR 155
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMT--MAT 208
L+Y+H SA ++H DLKPSN+L++ ++ DFG+++ + D E T +T +AT
Sbjct: 156 GLKYIH----SANVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLTEXVAT 210
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 211 RWYRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 27/224 (12%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNV-AIKVFKLQLGRAFRSFD---SECEVLRNVHH 97
+ F+ ++G GS+ V L + + A+KV K +L D +E V +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 98 RNLLKIFSSCSNPDFKAL-VLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH 156
L SC + + V+E + G L + + R ++ LAL YLH
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 127
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKL-LGDGEDSVTQTMTMATIGYMAPV 215
I++ DLK N+LLD +++D+G+ K L G+ T + T Y+AP
Sbjct: 128 ----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAP- 179
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
+IL+ ++ F D ++ GVL+ E G+ P D
Sbjct: 180 ----EILRGEDYGF--------SVDWWALGVLMFEMMAGRSPFD 211
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 69
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 125
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 126 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 180
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 181 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 228
Query: 274 ESLPH 278
H
Sbjct: 229 SECQH 233
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 101
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 157
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 158 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 212
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 213 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 260
Query: 274 ESLPH 278
H
Sbjct: 261 SECQH 265
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 88
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 144
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 145 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 199
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 200 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 247
Query: 274 ESLPH 278
H
Sbjct: 248 SECQH 252
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 74
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 130
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 131 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 185
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 186 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
Query: 274 ESLPH 278
H
Sbjct: 234 SECQH 238
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 47/239 (19%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 29 YTNLSYIGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 83
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSL-ENWLYSHNYFLDTLERLN------IMIDVW 149
H N++ I N +A +E M + + ++ + + Y L + L+ + +
Sbjct: 84 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQIL 138
Query: 150 LALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMAT 208
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D T +AT
Sbjct: 139 RGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 209 IGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 195 RWYRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 89
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 145
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 146 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 200
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 201 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 248
Query: 274 ESLPH 278
H
Sbjct: 249 SECQH 253
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 73
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 74 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 129
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 130 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 184
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 185 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 232
Query: 274 ESLPH 278
H
Sbjct: 233 SECQH 237
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 101
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 157
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 158 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 212
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 213 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 260
Query: 274 ESLPH 278
H
Sbjct: 261 SECQH 265
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 116
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 172
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 173 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 227
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 228 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 275
Query: 274 ESLPH 278
H
Sbjct: 276 SECQH 280
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 102
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 158
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 159 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 213
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 214 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 261
Query: 274 ESLPH 278
H
Sbjct: 262 SECQH 266
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 102
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 158
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 159 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 213
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 214 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 261
Query: 274 ESLPH 278
H
Sbjct: 262 SECQH 266
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 101
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 157
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 158 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 212
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 213 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 260
Query: 274 ESLPH 278
H
Sbjct: 261 SECQH 265
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 69
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 125
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 126 CHNXG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 180
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 181 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 228
Query: 274 ESLPH 278
H
Sbjct: 229 XECQH 233
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 69
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 125
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 126 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 180
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 181 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 228
Query: 274 ESLPH 278
H
Sbjct: 229 SECQH 233
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 88
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 144
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 145 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 199
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 200 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 247
Query: 274 ESLPH 278
H
Sbjct: 248 XECQH 252
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 89
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 145
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 146 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 200
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 201 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 248
Query: 274 ESLPH 278
H
Sbjct: 249 XECQH 253
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 89
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 145
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 146 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 200
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 201 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 248
Query: 274 ESLPH 278
H
Sbjct: 249 XECQH 253
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 101
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 157
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 158 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 212
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 213 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 260
Query: 274 ESLPH 278
H
Sbjct: 261 XECQH 265
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 29 YTNLSYIGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 83
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 140
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D +AT
Sbjct: 141 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 197 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 102
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 158
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 159 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 213
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 214 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 261
Query: 274 ESLPH 278
H
Sbjct: 262 XECQH 266
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 43/237 (18%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNVAIKVFKLQ-------LGRAFRSFDSECEVLRNVH 96
+ + +G G++G+V + N V + + K+ R R E ++L
Sbjct: 30 YTNLSYIGEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 84
Query: 97 HRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL-----A 151
H N++ I P + + + +E LY L T N I +L
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRG 141
Query: 152 LEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT-QTMTMATIG 210
L+Y+H SA ++H DLKPSN+LL+ ++ DFG++++ D +AT
Sbjct: 142 LKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMET------FTGKKPTDEM 261
Y AP L N+K ++ I D++S G +L E F GK D++
Sbjct: 198 YRAPEIML-------NSKGYTKSI-----DIWSVGCILAEMLSNRPIFPGKHYLDQL 242
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 121
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 122 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 177
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 178 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 232
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 233 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 280
Query: 274 ESLPH 278
H
Sbjct: 281 XECQH 285
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 108
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 164
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 165 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 219
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 220 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 267
Query: 274 ESLPH 278
H
Sbjct: 268 SECQH 272
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 74
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 130
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 131 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 185
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 186 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
Query: 274 ESLPH 278
H
Sbjct: 234 SECQH 238
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 102
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 158
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 159 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 213
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 214 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 261
Query: 274 ESLPH 278
H
Sbjct: 262 XECQH 266
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 116
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 172
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 173 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 227
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 228 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 275
Query: 274 ESLPH 278
H
Sbjct: 276 XECQH 280
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Query: 48 NLLGTGSFGIVYKGILSDGN---NVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKI- 103
+L+G GS+G VY + D N NVAIK ++ R F +LR + N LK
Sbjct: 32 HLIGRGSYGYVY--LAYDKNTEKNVAIK----KVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 104 ----FSSCSNPD----FKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
PD F L + L S L+ FL I+ ++ L ++
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 156 HHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDS 199
H + I+H DLKP+N LL+++ +V DFG+++ + +D+
Sbjct: 146 H----ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 49 LLGTGSFGIVYKGI-LSDGNNVAIKVFKL-------QLGRAFRSFDSECEVLRNVHH--R 98
LLG+G FG VY GI +SD VAIK + +L R E +L+ V
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFS 96
Query: 99 NLLKIFSSCSNPDFKALVLEL-MPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHH 157
++++ PD L+LE P L +++ + L R W LE + H
Sbjct: 97 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF----WQVLEAVRH 152
Query: 158 GHSSAPIVHCDLKPSNILLDENMVA-RVSDFGISKLLGDGEDSVTQTMTMATIGYMAPVS 216
H+ ++H D+K NIL+D N ++ DFG LL D T T Y P
Sbjct: 153 CHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEW 207
Query: 217 QLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKP---TDEMFTGEISLKNWVN 273
+ ++A V+S G+LL + G P +E+ G++ + V+
Sbjct: 208 IRYHRYHGRSAA------------VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 255
Query: 274 ESLPH 278
H
Sbjct: 256 XECQH 260
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 45/247 (18%)
Query: 38 QRATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV- 95
++ + F + G G+FG V G S G +VAIK K+ FR + E ++++++
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK--KVIQDPRFR--NRELQIMQDLA 74
Query: 96 --HHRNLLKI---FSSCSNPDFKAL----VLELMPNGSLENWLYSHNYFLDTLERLNIMI 146
HH N++++ F + D + + V+E +P+ +L NY+ + I+I
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRC--CRNYYRRQVAPPPILI 131
Query: 147 DVWL-----ALEYLHHGHSSAPIVHCDLKPSNILLDE-NMVARVSDFGISKLLGDGEDSV 200
V+L ++ LH S + H D+KP N+L++E + ++ DFG +K L E +V
Sbjct: 132 KVFLFQLIRSIGCLHL--PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV 189
Query: 201 TQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDE 260
+ + Y AP +L FG++ +A D++S G + E G +
Sbjct: 190 A---YICSRYYRAP--ELI---------FGNQHYTTA-VDIWSVGCIFAEMMLG----EP 230
Query: 261 MFTGEIS 267
+F G+ S
Sbjct: 231 IFRGDNS 237
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 27/224 (12%)
Query: 42 EGFNECNLLGTGSFGIVYKGILSDGNNV-AIKVFKLQLGRAFRSFD---SECEVLRNVHH 97
+ F+ ++G GS+ V L + + A++V K +L D +E V +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 98 RNLLKIFSSCSNPDFKAL-VLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLH 156
L SC + + V+E + G L + + R ++ LAL YLH
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 170
Query: 157 HGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKL-LGDGEDSVTQTMTMATIGYMAPV 215
I++ DLK N+LLD +++D+G+ K L G+ T + T Y+AP
Sbjct: 171 E----RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGTPNYIAP- 222
Query: 216 SQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
+IL+ ++ F D ++ GVL+ E G+ P D
Sbjct: 223 ----EILRGEDYGF--------SVDWWALGVLMFEMMAGRSPFD 254
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 33/228 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEV-----LR 93
AT + +G G++G VYK G+ VA+K ++ G + EV L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 94 NVHHRNLLKIFSSC--SNPDFK---ALVLELMPNGSLENWL-YSHNYFLDTLERLNIMID 147
H N++++ C S D + LV E + + L +L + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 148 VWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA 207
L++LH + IVH DLKP NIL+ +++DFG++++ + +
Sbjct: 121 FLRGLDFLH----ANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALAPVVV 173
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
T+ Y AP L + + D++S G + E F K
Sbjct: 174 TLWYRAPEVLL-------------QSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 53/248 (21%)
Query: 49 LLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEV--------LRNVHHRN 99
+LG GS G +V++G G VA+K R F C++ + H N
Sbjct: 22 ILGYGSSGTVVFQGSFQ-GRPVAVK-------RMLIDF---CDIALMEIKLLTESDDHPN 70
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLE------RLNIMIDVWLALE 153
+++ + S + F + LEL N +L++ + S N + L+ ++++ + +
Sbjct: 71 VIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-------------ENMVARVSDFGISKLLGDGEDSV 200
+LH S I+H DLKP NIL+ EN+ +SDFG+ K L G+
Sbjct: 130 HLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 201 TQTMT--MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ T G+ AP ++L+ N ++ ++ D++S G + + GK P
Sbjct: 186 RXNLNNPSGTSGWRAP-----ELLEESN-NLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 258 TDEMFTGE 265
+ ++ E
Sbjct: 240 FGDKYSRE 247
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 32/227 (14%)
Query: 50 LGTGSFGIVYKGILSD---GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS 106
+G GSFG V++ + D G A+K +L++ R E + ++ ++ +
Sbjct: 82 VGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRV-----EELVACAGLSSPRIVPLYGA 134
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
+ + +EL+ GSL L L L + LEYLH + I+H
Sbjct: 135 VREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLH----TRRILH 189
Query: 167 CDLKPSNILLD-ENMVARVSDFGISKLL---GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
D+K N+LL + A + DFG + L G G+ +T T +MAP +
Sbjct: 190 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG--- 246
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
KP +AK D++S +++ G P + F G + LK
Sbjct: 247 KPCDAKV----------DIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 283
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 33/228 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEV-----LR 93
AT + +G G++G VYK G+ VA+K ++ G + EV L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 94 NVHHRNLLKIFSSC--SNPDFK---ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
H N++++ C S D + LV E + + L +L E + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 149 WL-ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA 207
+L L++LH + IVH DLKP NIL+ +++DFG++++ + +
Sbjct: 121 FLRGLDFLH----ANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPVVV 173
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
T+ Y AP L + + D++S G + E F K
Sbjct: 174 TLWYRAPEVLL-------------QSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 32/227 (14%)
Query: 50 LGTGSFGIVYKGILSD---GNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSS 106
+G GSFG V++ + D G A+K +L++ R E + ++ ++ +
Sbjct: 66 VGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRV-----EELVACAGLSSPRIVPLYGA 118
Query: 107 CSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYLHHGHSSAPIVH 166
+ + +EL+ GSL L L L + LEYLH + I+H
Sbjct: 119 VREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLH----TRRILH 173
Query: 167 CDLKPSNILLD-ENMVARVSDFGISKLL---GDGEDSVTQTMTMATIGYMAPVSQLFDIL 222
D+K N+LL + A + DFG + L G G+ +T T +MAP +
Sbjct: 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG--- 230
Query: 223 KPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLK 269
KP +AK D++S +++ G P + F G + LK
Sbjct: 231 KPCDAKV----------DIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 267
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 41 TEGFNECNLLGTGSFGIVYKGILSDGN-NVAIKVFKLQ------------LGRAFRSFDS 87
++ ++ + LG+G+FG V+ + + N V +K K + LG+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKV----TL 78
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMID 147
E +L V H N++K+ N F LV+E +G L+ L++ F+D RL+ +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LD--LFA---FIDRHPRLDEPLA 132
Query: 148 VWL------ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVT 201
++ A+ YL I+H D+K NI++ E+ ++ DFG + L G+ T
Sbjct: 133 SYIFRQLVSAVGYLRLKD----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT 188
Query: 202 QTMTMATIGYMAP 214
TI Y AP
Sbjct: 189 ---FCGTIEYCAP 198
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 39/183 (21%)
Query: 88 ECEVLRNVHHRNLLKIFSSCSNPDFKAL--VLELMPNGSLE----------NWLYSHNYF 135
E ++LR + H+N++++ N + + + V+E G E +H YF
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 136 LDTLERLNIMIDVWLALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGD 195
+ID LEYLH S IVH D+KP N+LL ++S G+++ L
Sbjct: 116 CQ-------LID---GLEYLH----SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161
Query: 196 -GEDSVTQTMTMATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTG 254
D +T SQ +P G + K D++S GV L TG
Sbjct: 162 FAADDTCRT------------SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
Query: 255 KKP 257
P
Sbjct: 210 LYP 212
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 33/228 (14%)
Query: 40 ATEGFNECNLLGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEV-----LR 93
AT + +G G++G VYK G+ VA+K ++ G + EV L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 94 NVHHRNLLKIFSSC--SNPDFK---ALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDV 148
H N++++ C S D + LV E + + L +L E + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 149 WL-ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMA 207
+L L++LH + IVH DLKP NIL+ +++DFG++++ + +
Sbjct: 121 FLRGLDFLH----ANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFPVVV 173
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGK 255
T+ Y AP L + + D++S G + E F K
Sbjct: 174 TLWYRAPEVLL-------------QSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 92/226 (40%), Gaps = 35/226 (15%)
Query: 44 FNECNLLGTGSFGIVYKGILSDGNNV----AIKVFKLQLGRAFRSFDSEC-----EVLRN 94
FN +LG GSFG V +L+D AIK+ K + + D EC VL
Sbjct: 21 FNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDV--VIQDDDVECTMVEKRVLAL 75
Query: 95 VHHRNLLKIFSSC-SNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALE 153
+ L SC D V+E + G L + F + + + ++ + L
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP-QAVFYAAEISIGLF 134
Query: 154 YLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIGYMA 213
+LH I++ DLK N++LD +++DFG+ K D VT T Y+A
Sbjct: 135 FLH----KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIA 188
Query: 214 PVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTD 259
P + +G D +++GVLL E G+ P D
Sbjct: 189 PEIIAY-------QPYGK------SVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 84/220 (38%), Gaps = 40/220 (18%)
Query: 42 EGFNECNLLGTGSFGIVYK-GILSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNV----- 95
+ F + LG GS+G V+K DG A+K R+ F + R +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVK-------RSMSPFRGPKDRARKLAEVGS 109
Query: 96 -----HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWL 150
H +++ + L EL SL+ + L + + D L
Sbjct: 110 HEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLL 168
Query: 151 ALEYLHHGHSSAPIVHCDLKPSNILLDENMVARVSDFGISKLLGDGEDSVTQTMTMATIG 210
AL +LH S +VH D+KP+NI L ++ DFG+ LG Q
Sbjct: 169 ALAHLH----SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPR 221
Query: 211 YMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLME 250
YMAP ++L +G DV+S G+ ++E
Sbjct: 222 YMAP-----ELL---------QGSYGTAADVFSLGLTILE 247
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 40/227 (17%)
Query: 44 FNECNLLGTGSFGIVYKGILSD----GNNVAIKVFKLQLGRAFR----SFDSECEVLRNV 95
FNE LG G+F ++KG+ + G +V L +A R SF ++ +
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 96 HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
H++L+ + C D LV E + GSL+ +L + ++ L +L + + A+ +L
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL 129
Query: 156 HHGHSSAPIVHCDLKPSNILL--DENMVA------RVSDFGISKLLGDGEDSVTQTMTMA 207
++H ++ NILL +E+ ++SD GIS + + + +
Sbjct: 130 EEN----TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV------LPKDILQE 179
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTG 254
I ++ P I PKN + D +SFG L E +G
Sbjct: 180 RIPWVPPEC----IENPKNLNLAT--------DKWSFGTTLWEICSG 214
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 57/248 (22%)
Query: 49 LLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEV--------LRNVHHRN 99
+LG GS G +V++G G VA+K + C++ + H N
Sbjct: 40 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDF----------CDIALMEIKLLTESDDHPN 88
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLE------RLNIMIDVWLALE 153
+++ + S + F + LEL N +L++ + S N + L+ ++++ + +
Sbjct: 89 VIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-------------ENMVARVSDFGISKLLGDGEDSV 200
+LH S I+H DLKP NIL+ EN+ +SDFG+ K L G+
Sbjct: 148 HLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 201 TQTMT--MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ T G+ AP ++L+ + + I D++S G + + GK P
Sbjct: 204 RXNLNNPSGTSGWRAP-----ELLEESTKRRLTRSI-----DIFSMGCVFYYILSKGKHP 253
Query: 258 TDEMFTGE 265
+ ++ E
Sbjct: 254 FGDKYSRE 261
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 46/239 (19%)
Query: 50 LGTGSFGIVYKGI-LSDGNNVAIKVFKLQLGRAFRSFDSECEVLRNVHHRNLLKIFSSC- 107
LG G F +V + I S G A K K + R D E+L H +L++ SC
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLK----KRRRGQDCRAEIL---HEIAVLELAKSCP 89
Query: 108 ---------SNPDFKALVLELMPNGSLENW-LYSHNYFLDTLERLNIMIDVWLALEYLHH 157
N L+LE G + + L + + + ++ + + YLH
Sbjct: 90 RVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 158 GHSSAPIVHCDLKPSNILLDENMV---ARVSDFGISKLLGDGEDSVTQTMTMATIGYMAP 214
+ IVH DLKP NILL ++ DFG+S+ +G + M T Y+AP
Sbjct: 150 NN----IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG---HACELREIMGTPEYLAP 202
Query: 215 VSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTGKKPTDEMFTGEISLKNWVN 273
+D I+ D+++ G++ T P F GE + + ++N
Sbjct: 203 EILNYD-------------PITTATDMWNIGIIAYMLLTHTSP----FVGEDNQETYLN 244
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 57/248 (22%)
Query: 49 LLGTGSFG-IVYKGILSDGNNVAIKVFKLQLGRAFRSFDSECEV--------LRNVHHRN 99
+LG GS G +V++G G VA+K + C++ + H N
Sbjct: 40 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDF----------CDIALMEIKLLTESDDHPN 88
Query: 100 LLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLE------RLNIMIDVWLALE 153
+++ + S + F + LEL N +L++ + S N + L+ ++++ + +
Sbjct: 89 VIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 154 YLHHGHSSAPIVHCDLKPSNILLD-------------ENMVARVSDFGISKLLGDGEDSV 200
+LH S I+H DLKP NIL+ EN+ +SDFG+ K L G+
Sbjct: 148 HLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 201 TQTMT--MATIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFT-GKKP 257
+ T G+ AP ++L+ + + I D++S G + + GK P
Sbjct: 204 RXNLNNPSGTSGWRAP-----ELLEESTKRRLTRSI-----DIFSMGCVFYYILSKGKHP 253
Query: 258 TDEMFTGE 265
+ ++ E
Sbjct: 254 FGDKYSRE 261
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 40/227 (17%)
Query: 44 FNECNLLGTGSFGIVYKGILSD----GNNVAIKVFKLQLGRAFR----SFDSECEVLRNV 95
FNE LG G+F ++KG+ + G +V L +A R SF ++ +
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 96 HHRNLLKIFSSCSNPDFKALVLELMPNGSLENWLYSHNYFLDTLERLNIMIDVWLALEYL 155
H++L+ + C D LV E + GSL+ +L + ++ L +L + + A+ +L
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFL 129
Query: 156 HHGHSSAPIVHCDLKPSNILL--DENMVA------RVSDFGISKLLGDGEDSVTQTMTMA 207
++H ++ NILL +E+ ++SD GIS + + + +
Sbjct: 130 EEN----TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV------LPKDILQE 179
Query: 208 TIGYMAPVSQLFDILKPKNAKFGSEGIISAKCDVYSFGVLLMETFTG 254
I ++ P I PKN + D +SFG L E +G
Sbjct: 180 RIPWVPPEC----IENPKNLNLAT--------DKWSFGTTLWEICSG 214
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,315,970
Number of Sequences: 62578
Number of extensions: 392898
Number of successful extensions: 3218
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 251
Number of HSP's that attempted gapping in prelim test: 1060
Number of HSP's gapped (non-prelim): 1120
length of query: 314
length of database: 14,973,337
effective HSP length: 99
effective length of query: 215
effective length of database: 8,778,115
effective search space: 1887294725
effective search space used: 1887294725
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)