Query 047046
Match_columns 589
No_of_seqs 313 out of 1031
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 12:12:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047046.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047046hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 99.9 6.4E-26 2.2E-30 227.2 7.4 217 2-296 26-256 (256)
2 3i3n_A Kelch-like protein 11; 99.9 3E-25 1E-29 225.3 7.8 217 4-298 29-265 (279)
3 3htm_A Speckle-type POZ protei 99.8 5.4E-19 1.8E-23 165.6 11.9 111 4-126 31-149 (172)
4 2vkp_A BTB/POZ domain-containi 99.8 3.6E-19 1.2E-23 155.3 9.9 89 2-94 3-95 (109)
5 4eoz_A Speckle-type POZ protei 99.8 1.7E-19 5.8E-24 164.5 6.3 115 4-126 22-140 (145)
6 2if5_A Zinc finger and BTB dom 99.8 7.3E-19 2.5E-23 156.4 9.7 89 3-94 21-109 (120)
7 1r29_A B-cell lymphoma 6 prote 99.8 1.6E-18 5.5E-23 155.8 9.7 88 3-94 25-113 (127)
8 3b84_A Zinc finger and BTB dom 99.7 8.9E-19 3.1E-23 156.3 6.6 84 4-94 21-104 (119)
9 1buo_A POZ domain, protein (pr 99.7 2.8E-18 9.5E-23 153.4 9.0 83 4-94 25-107 (121)
10 2vpk_A Myoneurin; transcriptio 99.7 2.4E-18 8.1E-23 152.4 8.0 84 4-94 19-104 (116)
11 2z8h_A Transcription regulator 99.7 1.8E-18 6.1E-23 158.2 7.4 86 4-94 33-119 (138)
12 3ohu_A Transcription regulator 99.7 2.9E-18 9.9E-23 153.7 8.2 86 4-94 29-115 (125)
13 2ppi_A Gigaxonin; BTB domain, 99.7 4.5E-18 1.5E-22 157.2 9.5 91 2-94 42-133 (144)
14 3ga1_A Nucleus accumbens-assoc 99.7 3.9E-18 1.3E-22 154.1 8.1 85 3-94 29-114 (129)
15 2ihc_A Transcription regulator 99.7 3.3E-18 1.1E-22 153.6 7.0 86 4-94 26-112 (124)
16 2q81_A MIZ-1 protein; BTB/POZ 99.7 2.8E-18 9.6E-23 153.1 6.4 83 4-94 24-106 (119)
17 2yy9_A Zinc finger and BTB dom 99.7 4.4E-18 1.5E-22 155.3 7.8 85 3-94 21-105 (135)
18 3fkc_A Transcriptional regulat 99.7 9.9E-18 3.4E-22 149.3 9.0 84 3-94 27-111 (116)
19 3m5b_A Zinc finger and BTB dom 99.7 4.5E-18 1.5E-22 152.7 6.8 79 4-94 27-105 (119)
20 3hqi_A Speckle-type POZ protei 99.7 4.4E-17 1.5E-21 167.3 11.1 122 4-137 171-303 (312)
21 4ajy_C Transcription elongatio 99.2 2.8E-11 9.6E-16 104.9 8.7 79 10-92 4-96 (97)
22 2ast_A S-phase kinase-associat 99.2 5.6E-11 1.9E-15 111.8 8.3 81 10-94 3-112 (159)
23 1fs1_B SKP1, cyclin A/CDK2-ass 98.7 1.6E-08 5.6E-13 93.3 8.2 77 10-94 4-107 (141)
24 2p1m_A SKP1-like protein 1A; F 98.5 1.3E-08 4.4E-13 95.9 -0.9 78 10-94 6-111 (160)
25 1hv2_A Elongin C, ELC1; protei 98.4 9.4E-07 3.2E-11 76.9 8.4 79 10-93 6-99 (99)
26 2fnj_C Transcription elongatio 98.3 9E-07 3.1E-11 76.5 6.9 80 10-93 3-96 (96)
27 3v7d_A Suppressor of kinetocho 97.9 3.3E-05 1.1E-09 73.4 8.9 83 9-94 8-119 (169)
28 1vcb_B Protein (elongin C); tu 97.7 4.5E-05 1.5E-09 67.8 6.3 80 10-93 19-112 (112)
29 3drz_A BTB/POZ domain-containi 96.9 0.0044 1.5E-07 54.2 9.7 83 9-94 7-94 (107)
30 3kvt_A Potassium channel prote 93.0 0.091 3.1E-06 46.6 4.6 82 10-94 7-90 (115)
31 2eqx_A Kelch repeat and BTB do 92.3 0.042 1.4E-06 47.5 1.4 37 182-221 46-82 (105)
32 3drx_A BTB/POZ domain-containi 91.4 0.51 1.7E-05 45.9 8.0 87 5-94 8-100 (202)
33 1t1d_A Protein (potassium chan 90.7 0.39 1.3E-05 41.5 5.9 82 10-94 3-87 (100)
34 1s1g_A Potassium voltage-gated 89.3 0.47 1.6E-05 42.5 5.4 80 9-94 14-97 (124)
35 2nz0_B Potassium voltage-gated 88.3 0.68 2.3E-05 42.4 5.9 80 9-94 36-119 (140)
36 1nn7_A Potassium channel KV4.2 87.2 0.45 1.5E-05 41.3 3.8 79 10-94 2-84 (105)
37 3vmx_A Voltage-gated hydrogen 73.7 3.8 0.00013 30.8 4.1 27 513-539 13-39 (48)
38 1pd7_B MAD1; PAH2, SIN3, eukar 66.6 1.6 5.5E-05 28.6 0.6 15 79-93 3-17 (26)
39 3a2a_A Voltage-gated hydrogen 65.2 8.4 0.00029 29.7 4.4 27 513-539 20-46 (58)
40 2yy0_A C-MYC-binding protein; 55.1 8.4 0.00029 29.5 2.9 34 495-536 18-51 (53)
41 2r9r_B Paddle chimera voltage 54.5 15 0.00053 40.0 6.2 83 9-94 53-138 (514)
42 1vjh_A BET V I allergen family 49.3 11 0.00039 32.9 3.4 33 377-420 90-122 (122)
43 3vp9_A General transcriptional 47.2 21 0.00072 30.4 4.5 27 510-536 49-75 (92)
44 1deb_A APC protein, adenomatou 39.6 27 0.00091 26.5 3.4 36 494-537 15-50 (54)
45 2l5g_A GPS2 protein, G protein 25.3 1.1E+02 0.0038 21.7 4.4 29 509-537 6-34 (38)
46 1go4_E MAD1 (mitotic arrest de 21.7 1.1E+02 0.0036 26.5 4.6 28 511-538 12-39 (100)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.92 E-value=6.4e-26 Score=227.19 Aligned_cols=217 Identities=12% Similarity=0.117 Sum_probs=154.4
Q ss_pred CCCCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccc--cccccceEEecCCCCCHHHHHHHHHHHhCCccccChh
Q 047046 2 CSSGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSG--EAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTAA 79 (589)
Q Consensus 2 ~~~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~--e~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~~ 79 (589)
..+|.+|||+|.|||+.|++||.+|+++|+||++||++++. + +...+|.|++++ +++|+.+++|+|||++.++.+
T Consensus 26 ~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e-~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~~i~~~ 102 (256)
T 3hve_A 26 REESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDD-GSTYKIELEGIS--VMVMREILDYIFSGQIRLNED 102 (256)
T ss_dssp CC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC------------CEEECSSCC--HHHHHHHHHHHHHSCCCCC-C
T ss_pred HhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCccc-CCCCeEEeCCCC--HHHHHHHHhhccCCCCcccHh
Confidence 46789999999999999999999999999999999998664 3 356789999994 799999999999999999999
Q ss_pred hHHHHHHHHhhhcHH-------HHHHH-hhcchhhHHHHHhhhhhHHHHHHhhch---hhHHHHHHHHHHcCCCCCCcCC
Q 047046 80 NVVSLRCAAEYLRMK-------NFLNE-VFGNWTDSIRALETCEEVLPHAEELHI---VSRCINSLAMKACADPSLFSWP 148 (589)
Q Consensus 80 NV~~L~~AA~~LqM~-------~FL~~-v~~sw~~si~~L~sC~~L~~~Ae~~~i---v~rcidsLa~kac~d~~~~~~~ 148 (589)
||..++.||++|||+ +||.+ +. ..+|..++.+|+.+++ .+.|.+-|+.... .+
T Consensus 103 ~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~---------~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~----~v--- 166 (256)
T 3hve_A 103 TIQDVVQAADLLLLTDLKTLCCEFLEGCIA---------AENCIGIRDFALHYCLHHVHYLATEYLETHFR----DV--- 166 (256)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHHHHTCC---------SSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHH----HH---
T ss_pred HHHHHHHHHHHHChHHHHHHHHHHHHhhCC---------HhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHH----HH---
Confidence 999999999999999 67777 53 3578888888888874 4455555544421 00
Q ss_pred CCCCCCCCCCCCCccccCCccCCCCCCCCCCccccccccCChHHHHHHHHHhcccCCChhhHHHHHHHHHHhhcCccccC
Q 047046 149 MSGRTDGQSPGGTTLWNGIGVSSKPQPVTEDWWYEDVSFLRLPLYKRLILAVGMSSIKQESIAGSIIHYAKRHLPLLGRQ 228 (589)
Q Consensus 149 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~dWW~EDl~~L~idlf~rvI~am~~~g~~~e~I~~aL~~Yakk~l~~~~r~ 228 (589)
+-.+++..|+.+.+..+|++......+++.|+.+++.|+++..+. |
T Consensus 167 -------------------------------~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~--R- 212 (256)
T 3hve_A 167 -------------------------------SSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTEI--R- 212 (256)
T ss_dssp -------------------------------TTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--CC--S-
T ss_pred -------------------------------hCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHH--H-
Confidence 003689999999999999999888888999999999888553221 1
Q ss_pred CcCCCCCCCCccccCCCCCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhhhccCC-HHHHHHHHH
Q 047046 229 SSFQNGSRVEPVSIISAPSEEFQRTLLEELVELIPDKKGVAPTKFLLRLLRTSLKLQAS-QSCREILEK 296 (589)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~qr~LLEtIv~LLP~~k~~vs~~fLf~LLR~a~~l~as-~~Cr~~LE~ 296 (589)
...-..|++.|+. +.+|..||...+.....+..+ +.|+.-|++
T Consensus 213 -------------------~~~~~~ll~~VRf------~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 213 -------------------KVHMKDVMSALWV------SGLDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp -------------------TTTHHHHHHHHHH------HTTCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred -------------------HHHHHHHHHhCCC------CCCCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 1334689999985 447788999999998888888 689998875
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.91 E-value=3e-25 Score=225.27 Aligned_cols=217 Identities=14% Similarity=0.247 Sum_probs=169.2
Q ss_pred CCCCeeEEEEEc---CEEEEeehhhhccccHHHHHHhhcccccccccceEEec------CCCCCHHHHHHHHHHHhCCcc
Q 047046 4 SGLPSDVIIEVG---EWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFH------DIPGGAKAFLLVAKFCYGVKI 74 (589)
Q Consensus 4 ~g~~cDV~i~V~---~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~------~~pgga~~felvl~FcY~~~i 74 (589)
+|.+|||+|.|| |+.|++||.+|+++|+||++||++++.| +...+|.|+ ++ ++++|+.+++|+|||++
T Consensus 29 ~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e-~~~~~i~l~~~~~~~~v--~~~~f~~ll~~~Ytg~~ 105 (279)
T 3i3n_A 29 QGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSE-SRSGRVEMRKWSSEPGP--EPDTVEAVIEYMYTGRI 105 (279)
T ss_dssp HTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCS--CHHHHHHHHHHHHHSEE
T ss_pred cCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCcc-ccCCeEEeccccccCCC--CHHHHHHHHHhhCcCCc
Confidence 588999999998 9999999999999999999999988776 466789998 55 58999999999999999
Q ss_pred ccChhhHHHHHHHHhhhcHH-------HHHHH-hhcchhhHHHHHhhhhhHHHHHHhhch---hhHHHHHHHHHHcCCCC
Q 047046 75 DLTAANVVSLRCAAEYLRMK-------NFLNE-VFGNWTDSIRALETCEEVLPHAEELHI---VSRCINSLAMKACADPS 143 (589)
Q Consensus 75 ~it~~NV~~L~~AA~~LqM~-------~FL~~-v~~sw~~si~~L~sC~~L~~~Ae~~~i---v~rcidsLa~kac~d~~ 143 (589)
.++.+||..|+.||++|+|+ +||.+ +. ..+|..++.+|+.+++ .++|.+-|+... .
T Consensus 106 ~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~---------~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f----~ 172 (279)
T 3i3n_A 106 RVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLH---------LSNCVAIHSLAHMYTLSQLALKAADMIRRNF----H 172 (279)
T ss_dssp EEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCC---------TTTHHHHHHHHHHTTCHHHHHHHHHHHHHTH----H
T ss_pred ccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCC---------cchHHHHHHHHHHcCcHHHHHHHHHHHHHHH----H
Confidence 99999999999999999999 66666 53 3578888888988874 444444444331 1
Q ss_pred CCcCCCCCCCCCCCCCCCccccCCccCCCCCCCCCCccccccccCChHHHHHHHHHhcccCCChhhHHHHHHHHHHhhcC
Q 047046 144 LFSWPMSGRTDGQSPGGTTLWNGIGVSSKPQPVTEDWWYEDVSFLRLPLYKRLILAVGMSSIKQESIAGSIIHYAKRHLP 223 (589)
Q Consensus 144 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~dWW~EDl~~L~idlf~rvI~am~~~g~~~e~I~~aL~~Yakk~l~ 223 (589)
.+ +-.+++..|+.+.+..+|++......+++.|+++++.|+++..+
T Consensus 173 ~v----------------------------------~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~~ 218 (279)
T 3i3n_A 173 KV----------------------------------IQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAE 218 (279)
T ss_dssp HH----------------------------------TTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTHH
T ss_pred HH----------------------------------hcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCHH
Confidence 00 00368899999999999999988888899999999999976432
Q ss_pred ccccCCcCCCCCCCCccccCCCCCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhhhccCCHHHHHHHHHHH
Q 047046 224 LLGRQSSFQNGSRVEPVSIISAPSEEFQRTLLEELVELIPDKKGVAPTKFLLRLLRTSLKLQASQSCREILEKRI 298 (589)
Q Consensus 224 ~~~r~~~~~~~~~~~~~~~~~~~~~~~qr~LLEtIv~LLP~~k~~vs~~fLf~LLR~a~~l~as~~Cr~~LE~rI 298 (589)
. |. ..-..|++.|+. +.+|..+|..+++....+..++.|+..|..-.
T Consensus 219 ~--r~--------------------~~~~~ll~~VRf------~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~ 265 (279)
T 3i3n_A 219 E--RE--------------------RYFEELFKLLRL------SQMKPTYLTRHVKPERLVANNEVCVKLVADAV 265 (279)
T ss_dssp H--HT--------------------TTHHHHHTTSCG------GGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHH
T ss_pred H--HH--------------------HHHHHHHHhcCC------CCCCHHHHHHHhhccchhcCCHHHHHHHHHHH
Confidence 2 11 123467777764 55899999999999999999999998876544
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.78 E-value=5.4e-19 Score=165.62 Aligned_cols=111 Identities=23% Similarity=0.228 Sum_probs=98.4
Q ss_pred CCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCccccChhhHHH
Q 047046 4 SGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTAANVVS 83 (589)
Q Consensus 4 ~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~~NV~~ 83 (589)
++.+|||+|.|+|+.|++||.+|+++|+||++||.+.+.+ +....|.|+++ .+++|+.+++|+|++++.++.+|+..
T Consensus 31 ~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e-~~~~~i~l~~~--~~~~f~~~l~~~Yt~~~~~~~~~~~~ 107 (172)
T 3htm_A 31 NSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDV--EPEVFKEMMCFIYTGKAPNLDKMADD 107 (172)
T ss_dssp HTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCG-GGTTEEEECSS--CHHHHHHHHHHHHHSCCTTGGGTHHH
T ss_pred CCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccc-cCCCeEEecCC--CHHHHHHHHHHHhCCCCCCcHHHHHH
Confidence 5789999999999999999999999999999999987766 45679999998 47999999999999999999999999
Q ss_pred HHHHHhhhcHH-------HHHHH-hhcchhhHHHHHhhhhhHHHHHHhhch
Q 047046 84 LRCAAEYLRMK-------NFLNE-VFGNWTDSIRALETCEEVLPHAEELHI 126 (589)
Q Consensus 84 L~~AA~~LqM~-------~FL~~-v~~sw~~si~~L~sC~~L~~~Ae~~~i 126 (589)
|+.+|++++|+ .||.+ + ...+|..++.+|+.+++
T Consensus 108 ll~~A~~~~~~~l~~~c~~~l~~~l---------~~~n~~~~~~~A~~~~~ 149 (172)
T 3htm_A 108 LLAAADKYALERLKVMCEDALCSNL---------SVENAAEILILADLHSA 149 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTC---------CTTTHHHHHHHHHHTTC
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCc
Confidence 99999999999 55555 4 23578888888888874
No 4
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.78 E-value=3.6e-19 Score=155.32 Aligned_cols=89 Identities=28% Similarity=0.349 Sum_probs=79.0
Q ss_pred CCCCCCeeEEEEEcC----EEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCccccC
Q 047046 2 CSSGLPSDVIIEVGE----WSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLT 77 (589)
Q Consensus 2 ~~~g~~cDV~i~V~~----~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it 77 (589)
..+|.+|||+|.|+| +.|++||.+|+++|+||++||.+.+.| +. ..|.|+++ .+++|+.+++|+||+++.++
T Consensus 3 ~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e-~~-~~i~l~~~--~~~~f~~~l~~iYt~~~~~~ 78 (109)
T 2vkp_A 3 FNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAE-VK-SEIHIPDV--EPAAFLILLKYMYSDEIDLE 78 (109)
T ss_dssp TTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEETTS--CHHHHHHHHHHHHHCCCCCC
T ss_pred ccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCccc-CC-CeEEeCCC--CHHHHHHHHHHHcCCCccCC
Confidence 467999999999988 999999999999999999999988776 34 78999998 47999999999999999999
Q ss_pred hhhHHHHHHHHhhhcHH
Q 047046 78 AANVVSLRCAAEYLRMK 94 (589)
Q Consensus 78 ~~NV~~L~~AA~~LqM~ 94 (589)
.+||..|+.+|++++|+
T Consensus 79 ~~~~~~ll~~A~~~~~~ 95 (109)
T 2vkp_A 79 ADTVLATLYAAKKYIVP 95 (109)
T ss_dssp TTTHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhCcH
Confidence 99999999999999998
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.77 E-value=1.7e-19 Score=164.49 Aligned_cols=115 Identities=21% Similarity=0.213 Sum_probs=83.4
Q ss_pred CCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCccccChhhHHH
Q 047046 4 SGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTAANVVS 83 (589)
Q Consensus 4 ~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~~NV~~ 83 (589)
++.+|||+|.|+|+.|++||.+|+++|+||++||.+.+.+ +....|.|+++ .+++|+.+++|+|||++.++.+|+..
T Consensus 22 ~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e-~~~~~i~l~~~--~~~~~~~~l~~~Y~~~~~~~~~~~~~ 98 (145)
T 4eoz_A 22 NSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDV--EPEVFKEMMCFIYTGKAPNLDKMADD 98 (145)
T ss_dssp HTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHH-HHHTEEEECSS--CHHHHHHHHHHHHHSCCTTGGGTHHH
T ss_pred CCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcC-CCCceEEecCC--CHHHHHHHHHhhccCccCCcHHHHHH
Confidence 5789999999999999999999999999999999987665 45678999998 47999999999999999999999999
Q ss_pred HHHHHhhhcHH---HHHHH-hhcchhhHHHHHhhhhhHHHHHHhhch
Q 047046 84 LRCAAEYLRMK---NFLNE-VFGNWTDSIRALETCEEVLPHAEELHI 126 (589)
Q Consensus 84 L~~AA~~LqM~---~FL~~-v~~sw~~si~~L~sC~~L~~~Ae~~~i 126 (589)
++.+|++++|+ ....+ +.. . ....+|..++.+|+.+++
T Consensus 99 ll~~A~~~~~~~l~~~c~~~l~~----~-l~~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 99 LLAAADKYALERLKVMCEDALCS----N-LSVENAAEILILADLHSA 140 (145)
T ss_dssp HHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred HHHHHHHhCHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHhCH
Confidence 99999999999 22222 211 1 135688888899988875
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.77 E-value=7.3e-19 Score=156.38 Aligned_cols=89 Identities=25% Similarity=0.340 Sum_probs=79.8
Q ss_pred CCCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCccccChhhHH
Q 047046 3 SSGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTAANVV 82 (589)
Q Consensus 3 ~~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~~NV~ 82 (589)
.+|.+|||+|.|+|+.|++||.+|+++|+||++||.+.+.+ +....|.|+++ .+++|+.+++|+|||++.++.+|+.
T Consensus 21 ~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e-~~~~~i~l~~~--~~~~f~~ll~~~Yt~~~~~~~~~~~ 97 (120)
T 2if5_A 21 TQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVV-DQQNVYEIDFV--SAEALTALMDFAYTATLTVSTANVG 97 (120)
T ss_dssp HTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECCSS--CHHHHHHHHHHHHHSCCCCCGGGHH
T ss_pred hcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccc-cCCceEEeCCC--CHHHHHHHHHHHcCCCCccCHHHHH
Confidence 36899999999999999999999999999999999987766 45678999998 4799999999999999999999999
Q ss_pred HHHHHHhhhcHH
Q 047046 83 SLRCAAEYLRMK 94 (589)
Q Consensus 83 ~L~~AA~~LqM~ 94 (589)
.|+.||++++|+
T Consensus 98 ~ll~~A~~~~i~ 109 (120)
T 2if5_A 98 DILSAARLLEIP 109 (120)
T ss_dssp HHHHHHHHTTCH
T ss_pred HHHHHHHHhCCH
Confidence 999999999998
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.76 E-value=1.6e-18 Score=155.80 Aligned_cols=88 Identities=25% Similarity=0.473 Sum_probs=82.1
Q ss_pred CCCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEe-cCCCCCHHHHHHHHHHHhCCccccChhhH
Q 047046 3 SSGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQF-HDIPGGAKAFLLVAKFCYGVKIDLTAANV 81 (589)
Q Consensus 3 ~~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L-~~~pgga~~felvl~FcY~~~i~it~~NV 81 (589)
.+|.+|||+|.|+|+.|++||.+|+++|+||++||.+.+.+ ....|.| +++ .+++|+.+++|+|+|++.++.+|+
T Consensus 25 ~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e--~~~~i~l~~~~--~~~~f~~ll~~~Ytg~~~~~~~~~ 100 (127)
T 1r29_A 25 SRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR--NLSVINLDPEI--NPEGFNILLDFMYTSRLNLREGNI 100 (127)
T ss_dssp HTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT--TCSEEECCTTS--CHHHHHHHHHHHHHSCCCCCTTTH
T ss_pred hcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC--CCCEEEeCCCC--CHHHHHHHHHHHcCCCcCcCHHHH
Confidence 36899999999999999999999999999999999987764 4578999 888 479999999999999999999999
Q ss_pred HHHHHHHhhhcHH
Q 047046 82 VSLRCAAEYLRMK 94 (589)
Q Consensus 82 ~~L~~AA~~LqM~ 94 (589)
..|+.||++|+|+
T Consensus 101 ~~ll~~A~~~~i~ 113 (127)
T 1r29_A 101 MAVMATAMYLQME 113 (127)
T ss_dssp HHHHHHHHHTTCH
T ss_pred HHHHHHHHHhCCH
Confidence 9999999999998
No 8
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.75 E-value=8.9e-19 Score=156.31 Aligned_cols=84 Identities=26% Similarity=0.250 Sum_probs=78.9
Q ss_pred CCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCccccChhhHHH
Q 047046 4 SGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTAANVVS 83 (589)
Q Consensus 4 ~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~~NV~~ 83 (589)
+|.+|||+|.|||+.|++||.+|+++|+||++||.+++ ...|.|++++ +++|+.+++|+|||++.++.+||..
T Consensus 21 ~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~~~v~~ 93 (119)
T 3b84_A 21 KGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS-----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRDQ 93 (119)
T ss_dssp HTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT-----CCCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHHH
T ss_pred cCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC-----CCeEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHHH
Confidence 58899999999999999999999999999999998755 2579999985 7999999999999999999999999
Q ss_pred HHHHHhhhcHH
Q 047046 84 LRCAAEYLRMK 94 (589)
Q Consensus 84 L~~AA~~LqM~ 94 (589)
|+.||++|+|+
T Consensus 94 ll~~A~~~~i~ 104 (119)
T 3b84_A 94 VLLAARELRVP 104 (119)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHhCcH
Confidence 99999999998
No 9
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.74 E-value=2.8e-18 Score=153.38 Aligned_cols=83 Identities=25% Similarity=0.358 Sum_probs=77.9
Q ss_pred CCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCccccChhhHHH
Q 047046 4 SGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTAANVVS 83 (589)
Q Consensus 4 ~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~~NV~~ 83 (589)
+|.+|||+|.|+|+.|++||.+|+++|+||++||.++ ..+|.|++++ +++|+.+++|+|||++.++.+|+..
T Consensus 25 ~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~------~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~~~~~~~ 96 (121)
T 1buo_A 25 AGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN------SQHYTLDFLS--PKTFQQILEYAYTATLQAKAEDLDD 96 (121)
T ss_dssp HTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSSC--HHHHHHHHHHHHHSCCCCCGGGHHH
T ss_pred cCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC------CcEEEeCCCC--HHHHHHHHHhhcCCCcCCCHHHHHH
Confidence 5889999999999999999999999999999999753 2479999995 7999999999999999999999999
Q ss_pred HHHHHhhhcHH
Q 047046 84 LRCAAEYLRMK 94 (589)
Q Consensus 84 L~~AA~~LqM~ 94 (589)
++.||++|+|+
T Consensus 97 ll~~A~~~~i~ 107 (121)
T 1buo_A 97 LLYAAEILEIE 107 (121)
T ss_dssp HHHHHHHHTCH
T ss_pred HHHHHHHHCCH
Confidence 99999999998
No 10
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.74 E-value=2.4e-18 Score=152.35 Aligned_cols=84 Identities=26% Similarity=0.411 Sum_probs=77.5
Q ss_pred CCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEec--CCCCCHHHHHHHHHHHhCCccccChhhH
Q 047046 4 SGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFH--DIPGGAKAFLLVAKFCYGVKIDLTAANV 81 (589)
Q Consensus 4 ~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~--~~pgga~~felvl~FcY~~~i~it~~NV 81 (589)
+|.+|||+|.|+|+.|++||.+|+++|+||++||.+.. ...|.|+ ++ .+++|+.+++|+|||++.++.+||
T Consensus 19 ~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~~~~~--~~~~f~~ll~~~Yt~~~~~~~~~v 91 (116)
T 2vpk_A 19 AGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTS-----ENNVFLDQSQV--KADGFQKLLEFIYTGTLNLDSWNV 91 (116)
T ss_dssp HTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCC-----CSCEECCTTTC--CHHHHHHHHHHHHHSCCCCCTTTH
T ss_pred cCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCCC-----CCeEEeecCCC--CHHHHHHHHHHHcCCCcccCHHHH
Confidence 58899999999999999999999999999999998752 2467777 88 479999999999999999999999
Q ss_pred HHHHHHHhhhcHH
Q 047046 82 VSLRCAAEYLRMK 94 (589)
Q Consensus 82 ~~L~~AA~~LqM~ 94 (589)
..|+.||++|+|+
T Consensus 92 ~~ll~~A~~~~i~ 104 (116)
T 2vpk_A 92 KEIHQAADYLKVE 104 (116)
T ss_dssp HHHHHHHHHTTCH
T ss_pred HHHHHHHHHhCCH
Confidence 9999999999998
No 11
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.74 E-value=1.8e-18 Score=158.22 Aligned_cols=86 Identities=21% Similarity=0.301 Sum_probs=79.7
Q ss_pred CCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEec-CCCCCHHHHHHHHHHHhCCccccChhhHH
Q 047046 4 SGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFH-DIPGGAKAFLLVAKFCYGVKIDLTAANVV 82 (589)
Q Consensus 4 ~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~-~~pgga~~felvl~FcY~~~i~it~~NV~ 82 (589)
+|.+|||+|.|+|+.|++||.+|+++|+||++||.+.+.+ ...|.|+ ++ .+++|+.+++|+|||++.|+.+||.
T Consensus 33 ~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e---~~~i~l~~~v--~~~~~~~lL~~~Ytg~~~i~~~~v~ 107 (138)
T 2z8h_A 33 KDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA---ELTVTLPEEV--TVKGFEPLIQFAYTAKLILSKDNVD 107 (138)
T ss_dssp HTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT---TEEEECCTTS--CHHHHHHHHHHHHHSCCCCCTTTHH
T ss_pred hCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC---CceEEeCCCC--CHHHHHHHHHHhcCCCcccCHHHHH
Confidence 5889999999999999999999999999999999987754 3578885 78 4799999999999999999999999
Q ss_pred HHHHHHhhhcHH
Q 047046 83 SLRCAAEYLRMK 94 (589)
Q Consensus 83 ~L~~AA~~LqM~ 94 (589)
.|+.||++|||+
T Consensus 108 ~ll~~A~~~~i~ 119 (138)
T 2z8h_A 108 EVCRCVEFLSVH 119 (138)
T ss_dssp HHHHHHHHHTCG
T ss_pred HHHHHHHHhCCH
Confidence 999999999998
No 12
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.74 E-value=2.9e-18 Score=153.73 Aligned_cols=86 Identities=23% Similarity=0.334 Sum_probs=80.1
Q ss_pred CCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEecC-CCCCHHHHHHHHHHHhCCccccChhhHH
Q 047046 4 SGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHD-IPGGAKAFLLVAKFCYGVKIDLTAANVV 82 (589)
Q Consensus 4 ~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~-~pgga~~felvl~FcY~~~i~it~~NV~ 82 (589)
++.+|||+|.|+|+.|++||.+|+++|+||++||.+.+.+ ...|.|++ + .+++|+.+++|+|+|++.++.+||.
T Consensus 29 ~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e---~~~i~l~~~~--~~~~f~~~l~~iYtg~~~~~~~~v~ 103 (125)
T 3ohu_A 29 KDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN---DLVVSLPEEV--TARGFGPLLQFAYTAKLLLSRENIR 103 (125)
T ss_dssp HTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS---SCEEECCTTC--CHHHHHHHHHHHTTSEEEECTTTHH
T ss_pred cCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC---CcEEEeCCCC--CHHHHHHHHHhHcCCceEECHHHHH
Confidence 5789999999999999999999999999999999987654 46899987 8 4799999999999999999999999
Q ss_pred HHHHHHhhhcHH
Q 047046 83 SLRCAAEYLRMK 94 (589)
Q Consensus 83 ~L~~AA~~LqM~ 94 (589)
.|+.||++|+|.
T Consensus 104 ~ll~~A~~l~i~ 115 (125)
T 3ohu_A 104 EVIRCAEFLRMH 115 (125)
T ss_dssp HHHHHHHHHTBS
T ss_pred HHHHHHHHhCCH
Confidence 999999999997
No 13
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.73 E-value=4.5e-18 Score=157.20 Aligned_cols=91 Identities=11% Similarity=0.107 Sum_probs=79.8
Q ss_pred CCCCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhccccc-ccccceEEecCCCCCHHHHHHHHHHHhCCccccChhh
Q 047046 2 CSSGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGE-AEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTAAN 80 (589)
Q Consensus 2 ~~~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e-~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~~N 80 (589)
..+|.+|||+|.|+|+.|++||.+|+++|+||++||.+.+.+ ++....|.|++++ +++|+.+++|+|+|++.++.+|
T Consensus 42 ~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i~~~~ 119 (144)
T 2ppi_A 42 REESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNEDT 119 (144)
T ss_dssp TC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCCCTTT
T ss_pred HhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCCCHHH
Confidence 457899999999999999999999999999999999876543 1345689999985 7999999999999999999999
Q ss_pred HHHHHHHHhhhcHH
Q 047046 81 VVSLRCAAEYLRMK 94 (589)
Q Consensus 81 V~~L~~AA~~LqM~ 94 (589)
|..|+.||++|+|+
T Consensus 120 v~~ll~~A~~l~i~ 133 (144)
T 2ppi_A 120 IQDVVQAADLLLLT 133 (144)
T ss_dssp HHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhCcH
Confidence 99999999999998
No 14
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.73 E-value=3.9e-18 Score=154.06 Aligned_cols=85 Identities=21% Similarity=0.421 Sum_probs=78.9
Q ss_pred CCCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEec-CCCCCHHHHHHHHHHHhCCccccChhhH
Q 047046 3 SSGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFH-DIPGGAKAFLLVAKFCYGVKIDLTAANV 81 (589)
Q Consensus 3 ~~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~-~~pgga~~felvl~FcY~~~i~it~~NV 81 (589)
.++.+|||+|.|+|+.|++||.+|+++|+||++||... ....|.|+ +++ +++|+.+++|+|+|++.++.+||
T Consensus 29 ~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~-----~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~~~~~ 101 (129)
T 3ga1_A 29 LQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS-----RSAVVELPAAVQ--PQSFQQILSFCYTGRLSMNVGDQ 101 (129)
T ss_dssp HTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC-----CCSEEECCTTCC--HHHHHHHHHHHHHSEEECCTTTH
T ss_pred hcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC-----CCCEEEECCCCC--HHHHHHHHHHHhCCccccCHHHH
Confidence 36889999999999999999999999999999999875 23689996 884 79999999999999999999999
Q ss_pred HHHHHHHhhhcHH
Q 047046 82 VSLRCAAEYLRMK 94 (589)
Q Consensus 82 ~~L~~AA~~LqM~ 94 (589)
..|+.||++|||+
T Consensus 102 ~~ll~~A~~~~i~ 114 (129)
T 3ga1_A 102 DLLMYTAGFLQIQ 114 (129)
T ss_dssp HHHHHHHHHTTBT
T ss_pred HHHHHHHHHhCCH
Confidence 9999999999998
No 15
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.73 E-value=3.3e-18 Score=153.64 Aligned_cols=86 Identities=22% Similarity=0.290 Sum_probs=77.8
Q ss_pred CCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEec-CCCCCHHHHHHHHHHHhCCccccChhhHH
Q 047046 4 SGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFH-DIPGGAKAFLLVAKFCYGVKIDLTAANVV 82 (589)
Q Consensus 4 ~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~-~~pgga~~felvl~FcY~~~i~it~~NV~ 82 (589)
+|.+|||+|.|+|+.|++||.+|+++|+||++||.+.+.+ ...|.|+ ++ .+++|+.+++|+|||++.++.+||.
T Consensus 26 ~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e---~~~i~l~~~v--~~~~f~~lL~~iYtg~~~i~~~~v~ 100 (124)
T 2ihc_A 26 KDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG---ELNITLPEEV--TVKGFEPLIQFAYTAKLILSKENVD 100 (124)
T ss_dssp HTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTS--CHHHHHHHHHHHHHSEEEEETTTHH
T ss_pred cCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC---CceEeecCCc--CHHHHHHHHHHhcCCCcccCHHHHH
Confidence 5889999999999999999999999999999999987754 3578884 78 4799999999999999999999999
Q ss_pred HHHHHHhhhcHH
Q 047046 83 SLRCAAEYLRMK 94 (589)
Q Consensus 83 ~L~~AA~~LqM~ 94 (589)
.|+.||++|||+
T Consensus 101 ~ll~~A~~~~~~ 112 (124)
T 2ihc_A 101 EVCKCVEFLSVH 112 (124)
T ss_dssp HHHHHHHHHTBS
T ss_pred HHHHHHHHHCCH
Confidence 999999999998
No 16
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.72 E-value=2.8e-18 Score=153.07 Aligned_cols=83 Identities=27% Similarity=0.324 Sum_probs=76.5
Q ss_pred CCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCccccChhhHHH
Q 047046 4 SGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTAANVVS 83 (589)
Q Consensus 4 ~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~~NV~~ 83 (589)
+|.+|||+|.|+|+.|++||.+|+++|+||++||.+.. ..|.|+++ .+++|+.+++|+|||++.++.+||..
T Consensus 24 ~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~------~~i~l~~~--~~~~f~~ll~~~Ytg~~~i~~~~~~~ 95 (119)
T 2q81_A 24 LGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQK------DVVHLDIS--NAAGLGQVLEFMYTAKLSLSPENVDD 95 (119)
T ss_dssp HTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC------SGGGGGGC--CHHHHHHHHHHHHHSCCCCCTTTHHH
T ss_pred cCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCCC------CEEEeCCC--CHHHHHHHHHHHcCCCCccCHHHHHH
Confidence 58899999999999999999999999999999998632 35677777 47999999999999999999999999
Q ss_pred HHHHHhhhcHH
Q 047046 84 LRCAAEYLRMK 94 (589)
Q Consensus 84 L~~AA~~LqM~ 94 (589)
|+.||++|+|+
T Consensus 96 ll~~A~~l~i~ 106 (119)
T 2q81_A 96 VLAVATFLQMQ 106 (119)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHhCCH
Confidence 99999999998
No 17
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.72 E-value=4.4e-18 Score=155.33 Aligned_cols=85 Identities=24% Similarity=0.241 Sum_probs=77.2
Q ss_pred CCCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCccccChhhHH
Q 047046 3 SSGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTAANVV 82 (589)
Q Consensus 3 ~~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~~NV~ 82 (589)
.+|.+|||+|.|+|+.|++||.+|+++|+||++||...+ ...|.|++++ +++|+.+++|+|+|++.|+.+||.
T Consensus 21 ~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~~~~v~ 93 (135)
T 2yy9_A 21 EKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRD 93 (135)
T ss_dssp HTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC---------CCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHH
T ss_pred hcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHHH
Confidence 368999999999999999999999999999999998755 2479999985 799999999999999999999999
Q ss_pred HHHHHHhhhcHH
Q 047046 83 SLRCAAEYLRMK 94 (589)
Q Consensus 83 ~L~~AA~~LqM~ 94 (589)
.|+.||++|+|+
T Consensus 94 ~ll~~A~~l~i~ 105 (135)
T 2yy9_A 94 QVLLAAKELRVP 105 (135)
T ss_dssp HHHHHHHHTTCH
T ss_pred HHHHHHHHhCcH
Confidence 999999999998
No 18
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.72 E-value=9.9e-18 Score=149.32 Aligned_cols=84 Identities=25% Similarity=0.300 Sum_probs=78.0
Q ss_pred CCCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCcc-ccChhhH
Q 047046 3 SSGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKI-DLTAANV 81 (589)
Q Consensus 3 ~~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~i-~it~~NV 81 (589)
.+|.+|||+|.|+|+.|++||.+|+++|+||++||..+ ...|.|++++ +++|+.+++|+|||++ .++.+||
T Consensus 27 ~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~~~~~~ 98 (116)
T 3fkc_A 27 GHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA------GQVVELSFIR--AEIFAEILNYIYSSKIVRVRSDLL 98 (116)
T ss_dssp HHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSSC--HHHHHHHHHHHTTSCCCSCCHHHH
T ss_pred hcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeCCCC--HHHHHHHHHhhcCCCcCCCCHHHH
Confidence 35889999999999999999999999999999999864 2579999994 7999999999999999 7999999
Q ss_pred HHHHHHHhhhcHH
Q 047046 82 VSLRCAAEYLRMK 94 (589)
Q Consensus 82 ~~L~~AA~~LqM~ 94 (589)
..++.||++|||+
T Consensus 99 ~~ll~~A~~l~i~ 111 (116)
T 3fkc_A 99 DELIKSGQLLGVK 111 (116)
T ss_dssp HHHHHHHHHHTCH
T ss_pred HHHHHHHHHhCcc
Confidence 9999999999987
No 19
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.72 E-value=4.5e-18 Score=152.71 Aligned_cols=79 Identities=24% Similarity=0.307 Sum_probs=73.5
Q ss_pred CCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCccccChhhHHH
Q 047046 4 SGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTAANVVS 83 (589)
Q Consensus 4 ~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~~NV~~ 83 (589)
+|.+|||+|.|+|+.|++||.+||++|+||++ ....|.|++++ +++|+.+++|+|||++.|+.+||..
T Consensus 27 ~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------~~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~~ 94 (119)
T 3m5b_A 27 RPALCDTLITVGSQEFPAHSLVLAGVSQQLGR----------RGQWALGEGIS--PSTFAQLLNFVYGESVELQPGELRP 94 (119)
T ss_dssp TTTTCCEEEEETTEEEEECHHHHHTTCGGGCC----------CEEEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHHH
T ss_pred cCCCcceEEEECCEEEeeEHHHHHHcCHHHhc----------CCCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHHH
Confidence 58899999999999999999999999999974 12478999994 7999999999999999999999999
Q ss_pred HHHHHhhhcHH
Q 047046 84 LRCAAEYLRMK 94 (589)
Q Consensus 84 L~~AA~~LqM~ 94 (589)
|+.||++|||.
T Consensus 95 ll~aA~~l~i~ 105 (119)
T 3m5b_A 95 LQEAARALGVQ 105 (119)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHhCCH
Confidence 99999999998
No 20
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.69 E-value=4.4e-17 Score=167.30 Aligned_cols=122 Identities=20% Similarity=0.237 Sum_probs=101.0
Q ss_pred CCCCeeEEEEEcCEEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCccccChhhHHH
Q 047046 4 SGLPSDVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTAANVVS 83 (589)
Q Consensus 4 ~g~~cDV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~~NV~~ 83 (589)
++.+|||+|.|+|++|++||.+||++|+||++||.+.+.| +...+|.|+++ .+++|+.+++|+||+++.++.+|+..
T Consensus 171 ~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e-~~~~~i~l~~~--~~~~f~~~L~~iYt~~~~~~~~~~~~ 247 (312)
T 3hqi_A 171 NSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDV--EPEVFKEMMCFIYTGKAPNLDKMADD 247 (312)
T ss_dssp TTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEECSS--CHHHHHHHHHHHHHSCCTTHHHHHHH
T ss_pred CCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccc-cCCceEEecCC--CHHHHHHHHHhhcCCCCCChHHHHHH
Confidence 5789999999999999999999999999999999987766 46689999999 48999999999999999999999999
Q ss_pred HHHHHhhhcHH-------HHHHH-hhcchhhHHHHHhhhhhHHHHHHhhc---hhhHHHHHHHHH
Q 047046 84 LRCAAEYLRMK-------NFLNE-VFGNWTDSIRALETCEEVLPHAEELH---IVSRCINSLAMK 137 (589)
Q Consensus 84 L~~AA~~LqM~-------~FL~~-v~~sw~~si~~L~sC~~L~~~Ae~~~---iv~rcidsLa~k 137 (589)
|+.||++++|+ .||.+ + ...+|..++.+|+.++ +.++|++-|+..
T Consensus 248 ll~~A~~~~~~~l~~~c~~~l~~~~---------~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 303 (312)
T 3hqi_A 248 LLAAADKYALERLKVMCEDALCSNL---------SVENAAEILILADLHSADQLKTQAVDFINYH 303 (312)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTC---------CTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCHHHHHHHHHHHHHccC---------CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999 45554 4 2357778888888884 555666666543
No 21
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.21 E-value=2.8e-11 Score=104.90 Aligned_cols=79 Identities=18% Similarity=0.283 Sum_probs=65.1
Q ss_pred EEEEE-cCEEEEeehhhhccccHHHHHHhhc--ccccccccceEEecCCCCCHHHHHHHHHHHh-----C---Cccc---
Q 047046 10 VIIEV-GEWSFHLHKFPLLSRSGVLENLIAE--FSGEAEKKCVLQFHDIPGGAKAFLLVAKFCY-----G---VKID--- 75 (589)
Q Consensus 10 V~i~V-~~~~F~lHK~vLas~S~yfr~lf~~--~~~e~~~~~~i~L~~~pgga~~felvl~FcY-----~---~~i~--- 75 (589)
|+|.- +|+.|.+||.+ |++|+||+.||+. ...| +....|.|++++ +.+++.+++||| + +.|.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E-~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~ 79 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-NETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 79 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC---------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccc-cCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCc
Confidence 45554 89999999999 9999999999987 3333 345689999995 699999999999 5 6787
Q ss_pred cChhhHHHHHHHHhhhc
Q 047046 76 LTAANVVSLRCAAEYLR 92 (589)
Q Consensus 76 it~~NV~~L~~AA~~Lq 92 (589)
|+.+|+..|+.||+||+
T Consensus 80 i~~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 80 IAPEIALELLMAANFLD 96 (97)
T ss_dssp CCGGGHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhhhC
Confidence 99999999999999997
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.15 E-value=5.6e-11 Score=111.83 Aligned_cols=81 Identities=16% Similarity=0.238 Sum_probs=69.3
Q ss_pred EEEEE-cCEEEEeehhhhccccHHHHHHhhc-ccc-cccccceEEecCCCCCHHHHHHHHHHHhCCc-------------
Q 047046 10 VIIEV-GEWSFHLHKFPLLSRSGVLENLIAE-FSG-EAEKKCVLQFHDIPGGAKAFLLVAKFCYGVK------------- 73 (589)
Q Consensus 10 V~i~V-~~~~F~lHK~vLas~S~yfr~lf~~-~~~-e~~~~~~i~L~~~pgga~~felvl~FcY~~~------------- 73 (589)
|+|.. +|+.|.+||.+ |++|+||+.||.. +.. + +....|.|++++ +.+++.|++|||.++
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e-~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~ 78 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDE-GDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKE 78 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS-------CEECTTSC--HHHHHHHHHHHHHTTTCCC---------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCccc-ccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCcccccccc
Confidence 67765 89999999998 9999999999987 443 3 345689999995 599999999999877
Q ss_pred -------------cccChhhHHHHHHHHhhhcHH
Q 047046 74 -------------IDLTAANVVSLRCAAEYLRMK 94 (589)
Q Consensus 74 -------------i~it~~NV~~L~~AA~~LqM~ 94 (589)
+.|+.+|+..|+.||+||+|.
T Consensus 79 ~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~ 112 (159)
T 2ast_A 79 KRTDDIPVWDQEFLKVDQGTLFELILAANYLDIK 112 (159)
T ss_dssp --CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCH
T ss_pred cchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHH
Confidence 899999999999999999998
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.75 E-value=1.6e-08 Score=93.28 Aligned_cols=77 Identities=16% Similarity=0.264 Sum_probs=67.7
Q ss_pred EEEEE-cCEEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCc---------------
Q 047046 10 VIIEV-GEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVK--------------- 73 (589)
Q Consensus 10 V~i~V-~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~--------------- 73 (589)
|+|.. +|+.|.+|+.+ |..|+||+.|+.... + ..|.|++++ +.+++.|++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-~----~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 75 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG-M----DPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKR 75 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC-C----SSEECTTCC--HHHHHHHHHHHHHHTTCC------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC-C----CceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccc
Confidence 67776 89999999998 899999999998632 2 369999996 599999999999655
Q ss_pred -----------cccChhhHHHHHHHHhhhcHH
Q 047046 74 -----------IDLTAANVVSLRCAAEYLRMK 94 (589)
Q Consensus 74 -----------i~it~~NV~~L~~AA~~LqM~ 94 (589)
+.++.+++..|+.||+||+|.
T Consensus 76 ~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~ 107 (141)
T 1fs1_B 76 TDDIPVWDQEFLKVDQGTLFELILAANYLDIK 107 (141)
T ss_dssp -----HHHHHHTCSCHHHHHHHHHHHHHHTCH
T ss_pred hhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhh
Confidence 789999999999999999998
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.47 E-value=1.3e-08 Score=95.91 Aligned_cols=78 Identities=17% Similarity=0.299 Sum_probs=37.9
Q ss_pred EEEEE-cCEEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCc---------------
Q 047046 10 VIIEV-GEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVK--------------- 73 (589)
Q Consensus 10 V~i~V-~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~--------------- 73 (589)
|+|.. +|+.|.+|+.+ |..|+||+.||..... ...|.|++|+ +.+++.|++|||..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~----~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 78 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV----DNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAAT 78 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC----------------CCTTSC--HHHHHHHHHC--------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC----CCceeCCcCc--HHHHHHHHHHHHHcccCCCccccccccccc
Confidence 66664 89999999998 8999999999986432 2478999996 599999999999765
Q ss_pred ------------cccChhhHHHHHHHHhhhcHH
Q 047046 74 ------------IDLTAANVVSLRCAAEYLRMK 94 (589)
Q Consensus 74 ------------i~it~~NV~~L~~AA~~LqM~ 94 (589)
+.++..++..|+.||+||+|.
T Consensus 79 ~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~ 111 (160)
T 2p1m_A 79 SDDDLKAWDADFMKIDQATLFELILAANYLNIK 111 (160)
T ss_dssp ----------------------CHHHHHHTTCH
T ss_pred ccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHH
Confidence 578999999999999999998
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.37 E-value=9.4e-07 Score=76.87 Aligned_cols=79 Identities=14% Similarity=0.184 Sum_probs=66.6
Q ss_pred EEEEE-cCEEEEeehhhhccccHHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCc--------------c
Q 047046 10 VIIEV-GEWSFHLHKFPLLSRSGVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVK--------------I 74 (589)
Q Consensus 10 V~i~V-~~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~--------------i 74 (589)
|+|.- +|+.|.+|+.+ |..|++++.|+..+. + .....|.|++++ +.+++.|++|||..+ .
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e-~~~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~w 80 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-R-ESKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPEF 80 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-T-TCTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-c-cCCCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCCc
Confidence 67776 89999999996 899999999998744 3 234689999995 599999999999533 3
Q ss_pred ccChhhHHHHHHHHhhhcH
Q 047046 75 DLTAANVVSLRCAAEYLRM 93 (589)
Q Consensus 75 ~it~~NV~~L~~AA~~LqM 93 (589)
.+...++..|+.||+||++
T Consensus 81 ~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 81 EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCCHHHHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHHHHHhCc
Confidence 6889999999999999985
No 26
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.31 E-value=9e-07 Score=76.55 Aligned_cols=80 Identities=16% Similarity=0.240 Sum_probs=64.1
Q ss_pred EEEEE-cCEEEEeehhhhccccHHHHHHhhcc-c-ccccccceEEecCCCCCHHHHHHHHHHHhCCc-----------cc
Q 047046 10 VIIEV-GEWSFHLHKFPLLSRSGVLENLIAEF-S-GEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVK-----------ID 75 (589)
Q Consensus 10 V~i~V-~~~~F~lHK~vLas~S~yfr~lf~~~-~-~e~~~~~~i~L~~~pgga~~felvl~FcY~~~-----------i~ 75 (589)
|+|.- +|+.|.+|+.+ |..|++|+.|+... . .+ +....|.|++++ +.+++.|++|||..+ ..
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e-~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~ 78 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-NETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 78 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCccc-ccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCcc
Confidence 56665 89999999996 89999999999863 2 23 234689999995 599999999999533 46
Q ss_pred cChhhHHHHHHHHhhhcH
Q 047046 76 LTAANVVSLRCAAEYLRM 93 (589)
Q Consensus 76 it~~NV~~L~~AA~~LqM 93 (589)
+..+.+..|+.||+||++
T Consensus 79 vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 79 IAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCTTTHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 889999999999999985
No 27
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.89 E-value=3.3e-05 Score=73.37 Aligned_cols=83 Identities=17% Similarity=0.297 Sum_probs=64.7
Q ss_pred eEEEEE-cCEEEEeehhhhccccHHHHHHhhcccccc---cccceEEecCCCCCHHHHHHHHHHHhCCc-----------
Q 047046 9 DVIIEV-GEWSFHLHKFPLLSRSGVLENLIAEFSGEA---EKKCVLQFHDIPGGAKAFLLVAKFCYGVK----------- 73 (589)
Q Consensus 9 DV~i~V-~~~~F~lHK~vLas~S~yfr~lf~~~~~e~---~~~~~i~L~~~pgga~~felvl~FcY~~~----------- 73 (589)
-|+|+- +|+.|.+++.+ |..|++++.|+.....++ .....|.|++|+ +.+++.|++|||..+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 466665 89999999997 888999999998643210 112579999996 599999999999432
Q ss_pred --------------cccChhhHHHHHHHHhhhcHH
Q 047046 74 --------------IDLTAANVVSLRCAAEYLRMK 94 (589)
Q Consensus 74 --------------i~it~~NV~~L~~AA~~LqM~ 94 (589)
+.+....+..|+.||.||+|.
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk 119 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIK 119 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcH
Confidence 467889999999999999998
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.71 E-value=4.5e-05 Score=67.82 Aligned_cols=80 Identities=16% Similarity=0.238 Sum_probs=62.9
Q ss_pred EEEEE-cCEEEEeehhhhccccHHHHHHhhccc--ccccccceEEecCCCCCHHHHHHHHHHHhCCc-----------cc
Q 047046 10 VIIEV-GEWSFHLHKFPLLSRSGVLENLIAEFS--GEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVK-----------ID 75 (589)
Q Consensus 10 V~i~V-~~~~F~lHK~vLas~S~yfr~lf~~~~--~e~~~~~~i~L~~~pgga~~felvl~FcY~~~-----------i~ 75 (589)
|+|.- +|+.|.+++. .|..|+.++.|+.... .+ .....|.|++|+ +.+++.|++|||-.+ ..
T Consensus 19 v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e-~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~ 94 (112)
T 1vcb_B 19 VKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAE-NETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 94 (112)
T ss_dssp EEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC---------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCC
T ss_pred EEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCccc-ccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCcc
Confidence 55553 8999999999 5789999999998532 22 233579999995 599999999998432 46
Q ss_pred cChhhHHHHHHHHhhhcH
Q 047046 76 LTAANVVSLRCAAEYLRM 93 (589)
Q Consensus 76 it~~NV~~L~~AA~~LqM 93 (589)
+...++..|+.||+||++
T Consensus 95 vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 95 IAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 889999999999999985
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=96.92 E-value=0.0044 Score=54.18 Aligned_cols=83 Identities=16% Similarity=0.109 Sum_probs=63.3
Q ss_pred eEEEEEcCEEEEeehhhhcccc-HHHHHHhhcccc---cccccceEEecCCCCCHHHHHHHHHHHhCCccccCh-hhHHH
Q 047046 9 DVIIEVGEWSFHLHKFPLLSRS-GVLENLIAEFSG---EAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTA-ANVVS 83 (589)
Q Consensus 9 DV~i~V~~~~F~lHK~vLas~S-~yfr~lf~~~~~---e~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~-~NV~~ 83 (589)
=|+|.|||+.|...+..|.... .+|.+||..... ......++-| |- .|..|+.|++|..+|++.+.. -.+..
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DR--dp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DR--DPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CS--CHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cC--ChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 4678999999999999999885 578999875321 0012235555 33 579999999999999998744 34577
Q ss_pred HHHHHhhhcHH
Q 047046 84 LRCAAEYLRMK 94 (589)
Q Consensus 84 L~~AA~~LqM~ 94 (589)
++..|+|.+++
T Consensus 84 l~~Ea~fy~l~ 94 (107)
T 3drz_A 84 VLEEAEFYNIT 94 (107)
T ss_dssp HHHHHHHHTCH
T ss_pred HHHHHHHCCCH
Confidence 89999999988
No 30
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=93.00 E-value=0.091 Score=46.60 Aligned_cols=82 Identities=16% Similarity=0.110 Sum_probs=60.4
Q ss_pred EEEEEcCEEEEeehhhhcccc-HHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhCCccccCh-hhHHHHHHH
Q 047046 10 VIIEVGEWSFHLHKFPLLSRS-GVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTA-ANVVSLRCA 87 (589)
Q Consensus 10 V~i~V~~~~F~lHK~vLas~S-~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~-~NV~~L~~A 87 (589)
|+|.|||+.|...+..|.... ..|.+|+.....-+....++-|.- .|..|+.|++|.-+|++.+.. -.+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiDR---dp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFDR---HPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEECS---CTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEec---ChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 788999999999999998764 345666654211101234666642 357999999999999998755 357789999
Q ss_pred HhhhcHH
Q 047046 88 AEYLRMK 94 (589)
Q Consensus 88 A~~LqM~ 94 (589)
|+|.++.
T Consensus 84 a~fy~i~ 90 (115)
T 3kvt_A 84 LEFWGLD 90 (115)
T ss_dssp HHHHTCC
T ss_pred HHHhCCC
Confidence 9999987
No 31
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.30 E-value=0.042 Score=47.47 Aligned_cols=37 Identities=14% Similarity=0.046 Sum_probs=32.2
Q ss_pred ccccccCChHHHHHHHHHhcccCCChhhHHHHHHHHHHhh
Q 047046 182 YEDVSFLRLPLYKRLILAVGMSSIKQESIAGSIIHYAKRH 221 (589)
Q Consensus 182 ~EDl~~L~idlf~rvI~am~~~g~~~e~I~~aL~~Yakk~ 221 (589)
.++|..|+.+.+..+|+.. ..+++.|+++++.|+++.
T Consensus 46 ~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv~~d 82 (105)
T 2eqx_A 46 TEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWINFN 82 (105)
T ss_dssp SHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHHHTT
T ss_pred cccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHHHcC
Confidence 3799999999999999985 557788999999999664
No 32
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=91.36 E-value=0.51 Score=45.91 Aligned_cols=87 Identities=16% Similarity=0.119 Sum_probs=62.4
Q ss_pred CCCee-EEEEEcCEEEEeehhhhcccc-HHHHHHhhcccc--c-ccccceEEecCCCCCHHHHHHHHHHHhCCccccCh-
Q 047046 5 GLPSD-VIIEVGEWSFHLHKFPLLSRS-GVLENLIAEFSG--E-AEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTA- 78 (589)
Q Consensus 5 g~~cD-V~i~V~~~~F~lHK~vLas~S-~yfr~lf~~~~~--e-~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~- 78 (589)
|...+ |+|.|||+.|...+..|.... .+|.+||..... . .....++-|. - .|..|+.|++|.-+|++.+..
T Consensus 8 g~~~~~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFID-R--DP~~F~~ILnyLRtG~L~lP~~ 84 (202)
T 3drx_A 8 GSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLID-R--DPTYFGPVLNYLRHGKLVINKD 84 (202)
T ss_dssp SCCCCEEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEEC-S--CSTTHHHHHHHHHHSCCCCCTT
T ss_pred CCCCCEEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEec-C--ChHHHHHHHHHhcCCccCCCCC
Confidence 33344 577999999999999999875 478899865311 0 0112456553 2 357999999999999998744
Q ss_pred hhHHHHHHHHhhhcHH
Q 047046 79 ANVVSLRCAAEYLRMK 94 (589)
Q Consensus 79 ~NV~~L~~AA~~LqM~ 94 (589)
-.+..++.-|+|.++.
T Consensus 85 ~~~~~l~eEA~FygL~ 100 (202)
T 3drx_A 85 LAEEGVLEEAEFYNIT 100 (202)
T ss_dssp SCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHCCcH
Confidence 3446788889999887
No 33
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=90.73 E-value=0.39 Score=41.48 Aligned_cols=82 Identities=12% Similarity=0.077 Sum_probs=57.0
Q ss_pred EEEEEcCEEEEeehhhhcccc-HHHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhC-CccccCh-hhHHHHHH
Q 047046 10 VIIEVGEWSFHLHKFPLLSRS-GVLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYG-VKIDLTA-ANVVSLRC 86 (589)
Q Consensus 10 V~i~V~~~~F~lHK~vLas~S-~yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~-~~i~it~-~NV~~L~~ 86 (589)
|+|.|||+.|...+..|...- ..+.+|+.....-+....++-|.- .|..|+.|++|.-+ |++.+.. -.+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiDR---dp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFDR---NRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEECS---CSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEcC---ChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 789999999999999986552 234445542111001234666642 34799999999997 8987643 35677899
Q ss_pred HHhhhcHH
Q 047046 87 AAEYLRMK 94 (589)
Q Consensus 87 AA~~LqM~ 94 (589)
-|+|.++.
T Consensus 80 Ea~fy~i~ 87 (100)
T 1t1d_A 80 EIKFYELG 87 (100)
T ss_dssp HHHHTTCC
T ss_pred HHHHcCCC
Confidence 99999987
No 34
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=89.26 E-value=0.47 Score=42.52 Aligned_cols=80 Identities=14% Similarity=0.159 Sum_probs=56.2
Q ss_pred eEEEEEcCEEEEeehhhhccccHHHHHHhhccccc---ccccceEEecCCCCCHHHHHHHHHHHhCCccccChh-hHHHH
Q 047046 9 DVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGE---AEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTAA-NVVSL 84 (589)
Q Consensus 9 DV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e---~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~~-NV~~L 84 (589)
=|+|.|||+.|..-+..|...-+- |+...... .....++-|. -.+..|+.|++|.-+|++.+..+ .+..+
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~S---~L~~~~~~~~~~~~~g~~FiD---Rdp~~F~~ILnflR~G~l~~p~~~~~~~l 87 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFFD---RDPEVFRCVLNFYRTGKLHYPRYECISAY 87 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTS---STTSSGGGGTBCSSSCSEEEC---SCHHHHHHHHHHHHHSCBCCCTTSCHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCCc---eecccCCcccccCCCCcEEEc---CChHHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 478899999999999988765332 23221100 0122355553 25799999999999999987543 57889
Q ss_pred HHHHhhhcHH
Q 047046 85 RCAAEYLRMK 94 (589)
Q Consensus 85 ~~AA~~LqM~ 94 (589)
+.-|+|.++.
T Consensus 88 ~~Ea~fy~i~ 97 (124)
T 1s1g_A 88 DDELAFYGIL 97 (124)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHcCCC
Confidence 9999999987
No 35
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=88.28 E-value=0.68 Score=42.40 Aligned_cols=80 Identities=14% Similarity=0.168 Sum_probs=56.6
Q ss_pred eEEEEEcCEEEEeehhhhccccHHHHHHhhccccc---ccccceEEecCCCCCHHHHHHHHHHHhCCccccCh-hhHHHH
Q 047046 9 DVIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGE---AEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTA-ANVVSL 84 (589)
Q Consensus 9 DV~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e---~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~-~NV~~L 84 (589)
=|+|.|||+.|...+..|...-+- |+...... .....++-|. -.+..|+.|++|.-+|++.+.. -.+..+
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P~S---~L~~~~~~~~~~~~~g~yFiD---Rdp~~F~~ILnflR~G~l~~p~~~~~~~l 109 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFFD---RDPEVFRCVLNFYRTGKLHYPRYECISAY 109 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCTTS---TTTSGGGGGSEETTTTEEEEC---SCHHHHHHHHHHHHHSSBCCCTTSCHHHH
T ss_pred EEEEEECCEEEEeeHHHHhcCCCe---eecccCCcccccCCCCeEEEe---CCcHHHHHHHHHHhcCCcCCCCCcCHHHH
Confidence 478899999999999988765321 23321110 0123456653 2579999999999999998754 357889
Q ss_pred HHHHhhhcHH
Q 047046 85 RCAAEYLRMK 94 (589)
Q Consensus 85 ~~AA~~LqM~ 94 (589)
+.-|+|.++.
T Consensus 110 ~eEa~fy~i~ 119 (140)
T 2nz0_B 110 DDELAFYGIL 119 (140)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHcCCC
Confidence 9999999987
No 36
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=87.23 E-value=0.45 Score=41.30 Aligned_cols=79 Identities=10% Similarity=0.149 Sum_probs=55.7
Q ss_pred EEEEEcCEEEEeehhhhccccHHHHHHhhccccc---ccccceEEecCCCCCHHHHHHHHHHHhCCccccCh-hhHHHHH
Q 047046 10 VIIEVGEWSFHLHKFPLLSRSGVLENLIAEFSGE---AEKKCVLQFHDIPGGAKAFLLVAKFCYGVKIDLTA-ANVVSLR 85 (589)
Q Consensus 10 V~i~V~~~~F~lHK~vLas~S~yfr~lf~~~~~e---~~~~~~i~L~~~pgga~~felvl~FcY~~~i~it~-~NV~~L~ 85 (589)
|+|.|||+.|...+..|....+- |+...... .....++-|.- .|+.|+.|++|.-+|++.+.. -.+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~s---~L~~~~~~~~~~~~~~~~FiDR---dp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPDT---LLGSSERDFFYHPETQQYFFDR---DPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCSS---STTSGGGGGGEEGGGTEEEECS---CTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCCc---cccccCCcccccCCCCcEEEeC---CcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 78999999999999988765321 22221100 01234566543 458999999999999988754 3578899
Q ss_pred HHHhhhcHH
Q 047046 86 CAAEYLRMK 94 (589)
Q Consensus 86 ~AA~~LqM~ 94 (589)
.-|+|.++.
T Consensus 76 ~Ea~fy~i~ 84 (105)
T 1nn7_A 76 EELAFFGLI 84 (105)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHcCCC
Confidence 999999987
No 37
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=73.69 E-value=3.8 Score=30.83 Aligned_cols=27 Identities=33% Similarity=0.487 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhh
Q 047046 513 VDNMRERVSDLEKECMSMKQEIEKLVK 539 (589)
Q Consensus 513 l~~m~~rv~eLEke~~~mk~~~~~~~k 539 (589)
.+.+-+||.+||..|..+.||++++.+
T Consensus 13 n~~L~~kv~~Le~~c~~~eQEieRL~~ 39 (48)
T 3vmx_A 13 NIQLATKIQHLEFSCSEKEQEIERLNK 39 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 677889999999999999999998764
No 38
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=66.62 E-value=1.6 Score=28.62 Aligned_cols=15 Identities=40% Similarity=0.448 Sum_probs=13.3
Q ss_pred hhHHHHHHHHhhhcH
Q 047046 79 ANVVSLRCAAEYLRM 93 (589)
Q Consensus 79 ~NV~~L~~AA~~LqM 93 (589)
.||+.|+.||+||+=
T Consensus 3 ~nvq~LLeAAeyLEr 17 (26)
T 1pd7_B 3 MNIQMLLEAADYLER 17 (26)
T ss_dssp CSTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 499999999999973
No 39
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=65.22 E-value=8.4 Score=29.72 Aligned_cols=27 Identities=33% Similarity=0.500 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhh
Q 047046 513 VDNMRERVSDLEKECMSMKQEIEKLVK 539 (589)
Q Consensus 513 l~~m~~rv~eLEke~~~mk~~~~~~~k 539 (589)
=..+-.+|.+||..|..|-||++++.|
T Consensus 20 n~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 20 NVQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678999999999999999999864
No 40
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=55.06 E-value=8.4 Score=29.48 Aligned_cols=34 Identities=12% Similarity=0.217 Sum_probs=27.7
Q ss_pred ccchhhhhccCCcchHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 047046 495 TRNDGHAQARNSQDSIVAVDNMRERVSDLEKECMSMKQEIEK 536 (589)
Q Consensus 495 ~re~~~lk~~~~~~~~~~l~~m~~rv~eLEke~~~mk~~~~~ 536 (589)
..|.+.||.+ ++.+|.|+.+|.+++..++..+.+
T Consensus 18 ~~d~eaLk~E--------~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 18 NPEIELLRLE--------LAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp CHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3467788888 888999999999999888887754
No 41
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=54.53 E-value=15 Score=40.02 Aligned_cols=83 Identities=8% Similarity=0.073 Sum_probs=55.2
Q ss_pred eEEEEEcCEEEEeehhhhccccH-HHHHHhhcccccccccceEEecCCCCCHHHHHHHHHHHhC-CccccCh-hhHHHHH
Q 047046 9 DVIIEVGEWSFHLHKFPLLSRSG-VLENLIAEFSGEAEKKCVLQFHDIPGGAKAFLLVAKFCYG-VKIDLTA-ANVVSLR 85 (589)
Q Consensus 9 DV~i~V~~~~F~lHK~vLas~S~-yfr~lf~~~~~e~~~~~~i~L~~~pgga~~felvl~FcY~-~~i~it~-~NV~~L~ 85 (589)
=|+|.|||+.|...+..|...-+ .+-+++.....-+....++-+. -.|+.|+.+++|..+ |++.+.. -.+..+.
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~D---R~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFD---RNRPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEEC---SCHHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEEc---CChHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 36789999999999988865421 1112222111100123456653 257999999999998 9988644 3466788
Q ss_pred HHHhhhcHH
Q 047046 86 CAAEYLRMK 94 (589)
Q Consensus 86 ~AA~~LqM~ 94 (589)
.-|+|.++.
T Consensus 130 ~E~~f~~i~ 138 (514)
T 2r9r_B 130 EEIRFYELG 138 (514)
T ss_dssp HHHHHTTCC
T ss_pred HHHHhcCCC
Confidence 889999988
No 42
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=49.35 E-value=11 Score=32.95 Aligned_cols=33 Identities=6% Similarity=-0.124 Sum_probs=25.5
Q ss_pred hhcCCCCCChhHHHHHHHhCCCCCCCCcchhhHHHHHHHHhCCC
Q 047046 377 EVAPDVNLKLPKFQSLASAIPDYARPLDDGIYRAIDIFLKAHPW 420 (589)
Q Consensus 377 EiA~D~nL~~~kF~~Lae~lP~~aR~~~DgLYrAIDiYLkaHp~ 420 (589)
|...|.+.+|.++.+.+ .|+++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 44567788888887765 6889999999999983
No 43
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=47.21 E-value=21 Score=30.39 Aligned_cols=27 Identities=22% Similarity=0.335 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 047046 510 IVAVDNMRERVSDLEKECMSMKQEIEK 536 (589)
Q Consensus 510 ~~~l~~m~~rv~eLEke~~~mk~~~~~ 536 (589)
..||+.||..|.+||..+..||+..+.
T Consensus 49 i~Emq~Ir~tvyeLE~~h~kmKq~YEe 75 (92)
T 3vp9_A 49 LAEMQQIRNTVYERELTHRKMKDAYEE 75 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367999999999999999999997754
No 44
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=39.56 E-value=27 Score=26.51 Aligned_cols=36 Identities=19% Similarity=0.421 Sum_probs=30.2
Q ss_pred cccchhhhhccCCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHh
Q 047046 494 LTRNDGHAQARNSQDSIVAVDNMRERVSDLEKECMSMKQEIEKL 537 (589)
Q Consensus 494 ~~re~~~lk~~~~~~~~~~l~~m~~rv~eLEke~~~mk~~~~~~ 537 (589)
+..||-.||-| ++.=...++.||.|-+.||.-+..+
T Consensus 15 Lk~ENshLrrE--------L~dNS~~lskLE~ets~mKevlk~l 50 (54)
T 1deb_A 15 LKMENSNLRQE--------LEDNSNHLTKLETEASNMKEVLKQL 50 (54)
T ss_dssp HHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHH--------HHhhHHHHHHHHhhhhhHHHHHHHH
Confidence 46677777777 9999999999999999999877654
No 45
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=25.29 E-value=1.1e+02 Score=21.71 Aligned_cols=29 Identities=17% Similarity=0.465 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHHh
Q 047046 509 SIVAVDNMRERVSDLEKECMSMKQEIEKL 537 (589)
Q Consensus 509 ~~~~l~~m~~rv~eLEke~~~mk~~~~~~ 537 (589)
..+.++..|..|+.||+...++|.+-+.+
T Consensus 6 e~mTLeEtkeQi~~l~~kl~~LkeEKHQL 34 (38)
T 2l5g_A 6 ERMSLEETKEQILKLEEKLLALQEEKHQL 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34668888999999998888888876543
No 46
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=21.69 E-value=1.1e+02 Score=26.47 Aligned_cols=28 Identities=29% Similarity=0.379 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhh
Q 047046 511 VAVDNMRERVSDLEKECMSMKQEIEKLV 538 (589)
Q Consensus 511 ~~l~~m~~rv~eLEke~~~mk~~~~~~~ 538 (589)
.++...|.++.+||+|+..++++++.+.
T Consensus 12 e~~~~lr~ei~~Le~E~~rLr~~~~~LE 39 (100)
T 1go4_E 12 EEADTLRLKVEELEGERSRLEEEKRMLE 39 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3488999999999999999999887753
Done!