Citrus Sinensis ID: 047048

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
METRQTCLKLEIPHATDPIFVKGTWFQSHFDLSITDGLNAWLCNASEEQVKDRAALWDQPVTEYIKLAERYLGFQQPGCVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNSKKVPAGILDFLMDANIRLSAEKCLAQSERFKNEKLEFESAIYAKFLGVLNSKKSKLRELQDKLSKQAVMGDLQQEEEESTDETESFDEGTDDDKSEEEPAKDITSTSIGVPASRARGRKRISRK
ccccEEEEEEEcccccccEEEEEEECccCEEEEEEcccccEEEEccHHHHHHHHHHccccHHHHHHHHHHHHccccccccEEEECccccCEEEEEEEEECcCEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccHHHHHHHHHHHHHHHHHccccccHHcccccccccccccccccccccccccccccccccccccccccccccccc
*****TCLKLEIPHATDPIFVKGTWFQSHFDLSITDGLNAWLCNASEEQVKDRAALWDQPVTEYIKLAERYLGFQQPGCVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNSKKVPAGILDFLMDANIRLSAEKCLAQSERFKNEKLEFESAIYAKFLGVLNSKK***********************************************************************
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METRQTCLKLEIPHATDPIFVKGTWFQSHFDLSITDGLNAWLCNASEEQVKDRAALWDQPVTEYIKLAERYLGFQQPGCVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNSKKVPAGILDFLMDANIRLSAEKCLAQSERFKNEKLEFESAIYAKFLGVLNSKKSKLRELQDKLSKQAVMGDLQQEEEESTDETESFDEGTDDDKSEEEPAKDITSTSIGVPASRARGRKRISRK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DNA repair protein XRCC4 May be involved in DNA nonhomologous end joining (NHEJ) required for double-strand break repair. May bind to DNA. The LIG4-XRCC4 complex is probably responsible for the NHEJ ligation step, and XRCC4 may enhance the joining activity of LIG4.probableQ682V0

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1IK9, chain A
Confidence level:very confident
Coverage over the Query: 5-190
View the alignment between query and template
View the model in PyMOL