BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047053
(192 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KDH|A Chain A, Structure Of Ligand-Free Pyl2
pdb|3KDH|B Chain B, Structure Of Ligand-Free Pyl2
pdb|3KDH|C Chain C, Structure Of Ligand-Free Pyl2
pdb|3KDI|A Chain A, Structure Of (+)-Aba Bound Pyl2
pdb|3NR4|A Chain A, Pyrabactin-Bound Pyl2
pdb|3NR4|B Chain B, Pyrabactin-Bound Pyl2
pdb|3NR4|C Chain C, Pyrabactin-Bound Pyl2
pdb|3NS2|A Chain A, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3NS2|B Chain B, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3NS2|C Chain C, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3KL1|A Chain A, Crystal Structure Of Abscisic Acid Receptor Pyl2 At 1.55 A
pdb|3KL1|B Chain B, Crystal Structure Of Abscisic Acid Receptor Pyl2 At 1.55 A
Length = 190
Score = 221 bits (564), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 133/160 (83%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRD 86
YH F P P TCTSLITQ+I+ P S VWP +R F NP++YK+F++ C + G G+VGSVR+
Sbjct: 25 YHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGSVRE 84
Query: 87 VNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYCV 146
V +ISG PA+TSTERLE +DD++ +LSFRV+GG+HRL+NY+SVTSVN+F+++++G+VY V
Sbjct: 85 VTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQDSGKVYTV 144
Query: 147 VLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMAS 186
VLESY VDIPEGN+++DT++FV TVVKLNL +L A ++
Sbjct: 145 VLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATSA 184
>pdb|3NJ0|A Chain A, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
pdb|3NJ0|B Chain B, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
pdb|3NJ0|C Chain C, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
Length = 193
Score = 221 bits (564), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 133/160 (83%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRD 86
YH F P P TCTSLITQ+I+ P S VWP +R F NP++YK+F++ C + G G+VGSVR+
Sbjct: 28 YHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGSVRE 87
Query: 87 VNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYCV 146
V +ISG PA+TSTERLE +DD++ +LSFRV+GG+HRL+NY+SVTSVN+F+++++G+VY V
Sbjct: 88 VTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQDSGKVYTV 147
Query: 147 VLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMAS 186
VLESY VDIPEGN+++DT++FV TVVKLNL +L A ++
Sbjct: 148 VLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATSA 187
>pdb|3KAZ|A Chain A, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KAZ|B Chain B, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KAZ|C Chain C, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KB0|A Chain A, Crystal Structure Of Abscisic Acid-Bound Pyl2
pdb|3KB3|A Chain A, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 176
Score = 221 bits (563), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 133/160 (83%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRD 86
YH F P P TCTSLITQ+I+ P S VWP +R F NP++YK+F++ C + G G+VGSVR+
Sbjct: 13 YHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGSVRE 72
Query: 87 VNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYCV 146
V +ISG PA+TSTERLE +DD++ +LSFRV+GG+HRL+NY+SVTSVN+F+++++G+VY V
Sbjct: 73 VTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQDSGKVYTV 132
Query: 147 VLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMAS 186
VLESY VDIPEGN+++DT++FV TVVKLNL +L A ++
Sbjct: 133 VLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATSA 172
>pdb|3NMH|A Chain A, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
pdb|3NMH|B Chain B, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
pdb|3NMH|C Chain C, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
Length = 178
Score = 221 bits (562), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 133/160 (83%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRD 86
YH F P P TCTSLITQ+I+ P S VWP +R F NP++YK+F++ C + G G+VGSVR+
Sbjct: 14 YHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGSVRE 73
Query: 87 VNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYCV 146
V +ISG PA+TSTERLE +DD++ +LSFRV+GG+HRL+NY+SVTSVN+F+++++G+VY V
Sbjct: 74 VTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQDSGKVYTV 133
Query: 147 VLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMAS 186
VLESY VDIPEGN+++DT++FV TVVKLNL +L A ++
Sbjct: 134 VLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATSA 173
>pdb|3NJ1|A Chain A, X-Ray Crystal Structure Of The Pyl2(V114i)-Pyrabactin A
Complex
Length = 193
Score = 221 bits (562), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 96/160 (60%), Positives = 133/160 (83%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRD 86
YH F P P TCTSLITQ+I+ P S VWP +R F NP++YK+F++ C + G G+VGSVR+
Sbjct: 28 YHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGSVRE 87
Query: 87 VNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYCV 146
V +ISG PA+TSTERLE +DD++ +LSFR++GG+HRL+NY+SVTSVN+F+++++G+VY V
Sbjct: 88 VTVISGLPASTSTERLEFVDDDHRVLSFRIVGGEHRLKNYKSVTSVNEFLNQDSGKVYTV 147
Query: 147 VLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMAS 186
VLESY VDIPEGN+++DT++FV TVVKLNL +L A ++
Sbjct: 148 VLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATSA 187
>pdb|3UJL|A Chain A, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 177
Score = 221 bits (562), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 133/160 (83%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRD 86
YH F P P TCTSLITQ+I+ P S VWP +R F NP++YK+F++ C + G G+VGSVR+
Sbjct: 14 YHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGSVRE 73
Query: 87 VNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYCV 146
V +ISG PA+TSTERLE +DD++ +LSFRV+GG+HRL+NY+SVTSVN+F+++++G+VY V
Sbjct: 74 VTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQDSGKVYTV 133
Query: 147 VLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMAS 186
VLESY VDIPEGN+++DT++FV TVVKLNL +L A ++
Sbjct: 134 VLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATSA 173
>pdb|3NMP|A Chain A, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMP|B Chain B, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMP|C Chain C, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMT|A Chain A, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
pdb|3NMV|A Chain A, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
Length = 178
Score = 218 bits (554), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 96/160 (60%), Positives = 132/160 (82%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRD 86
YH F P P TCTSLITQ+I+ P S VWP +R F NP++YK+F++ C + G G+VGSVR+
Sbjct: 14 YHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGSVRE 73
Query: 87 VNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYCV 146
V +ISG P +TSTERLE +DD++ +LSFRV+GG+HRL+NY+SVTSVN+F+++++G+VY V
Sbjct: 74 VTVISGLPFSTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQDSGKVYTV 133
Query: 147 VLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMAS 186
VLESY VDIPEGN+++DT++FV TVVKLNL +L A ++
Sbjct: 134 VLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATSA 173
>pdb|4DSC|A Chain A, Complex Structure Of Abscisic Acid Receptor Pyl3 With
(+)-Aba In Spacegroup Of H32 At 1.95a
pdb|4DSC|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3 With
(+)-Aba In Spacegroup Of H32 At 1.95a
Length = 188
Score = 209 bits (533), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 133/168 (79%), Gaps = 8/168 (4%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKV-GAG----EV 81
+HTFP SPNTCTSLI +++ P +W FVRDF NP+KYK+FI+SCT++V G G +V
Sbjct: 19 HHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFANPNKYKHFIKSCTIRVNGNGIKEIKV 78
Query: 82 GSVRDVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFI---SE 138
G++R+V+++SG PA+TS E LE+LD+E ILSFRVLGG+HRL NYRSVTSVN+F+ +
Sbjct: 79 GTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRLNNYRSVTSVNEFVVLEKD 138
Query: 139 ETGEVYCVVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMAS 186
+ VY VVLESY+VDIP+GN+++DTR+FV TVVK NL LA ++ AS
Sbjct: 139 KKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKSNLQNLAVISTAS 186
>pdb|4DSB|A Chain A, Complex Structure Of Abscisic Acid Receptor Pyl3 With
(+)-Aba In Spacegroup Of I 212121 At 2.70a
pdb|4DSB|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3 With
(+)-Aba In Spacegroup Of I 212121 At 2.70a
Length = 186
Score = 209 bits (533), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 133/168 (79%), Gaps = 8/168 (4%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKV-GAG----EV 81
+HTFP SPNTCTSLI +++ P +W FVRDF NP+KYK+FI+SCT++V G G +V
Sbjct: 17 HHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFANPNKYKHFIKSCTIRVNGNGIKEIKV 76
Query: 82 GSVRDVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFI---SE 138
G++R+V+++SG PA+TS E LE+LD+E ILSFRVLGG+HRL NYRSVTSVN+F+ +
Sbjct: 77 GTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRLNNYRSVTSVNEFVVLEKD 136
Query: 139 ETGEVYCVVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMAS 186
+ VY VVLESY+VDIP+GN+++DTR+FV TVVK NL LA ++ AS
Sbjct: 137 KKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKSNLQNLAVISTAS 184
>pdb|3OJI|A Chain A, X-Ray Crystal Structure Of The Py13 -Pyrabactin Complex
pdb|3OJI|B Chain B, X-Ray Crystal Structure Of The Py13 -Pyrabactin Complex
Length = 189
Score = 209 bits (532), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 133/168 (79%), Gaps = 8/168 (4%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKV-GAG----EV 81
+HTFP SPNTCTSLI +++ P +W FVRDF NP+KYK+FI+SCT++V G G +V
Sbjct: 20 HHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFANPNKYKHFIKSCTIRVNGNGIKEIKV 79
Query: 82 GSVRDVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFI---SE 138
G++R+V+++SG PA+TS E LE+LD+E ILSFRVLGG+HRL NYRSVTSVN+F+ +
Sbjct: 80 GTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRLNNYRSVTSVNEFVVLEKD 139
Query: 139 ETGEVYCVVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMAS 186
+ VY VVLESY+VDIP+GN+++DTR+FV TVVK NL LA ++ AS
Sbjct: 140 KKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKSNLQNLAVISTAS 187
>pdb|3KLX|A Chain A, Crystal Structure Of Native Abscisic Acid Receptor Pyl3
pdb|3KLX|B Chain B, Crystal Structure Of Native Abscisic Acid Receptor Pyl3
pdb|4DS8|A Chain A, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 209
Score = 208 bits (529), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 133/168 (79%), Gaps = 8/168 (4%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKV-GAG----EV 81
+HTFP SPNTCTSLI +++ P +W FVRDF NP+KYK+FI+SCT++V G G +V
Sbjct: 40 HHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFANPNKYKHFIKSCTIRVNGNGIKEIKV 99
Query: 82 GSVRDVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFI---SE 138
G++R+V+++SG PA+TS E LE+LD+E ILSFRVLGG+HRL NYRSVTSVN+F+ +
Sbjct: 100 GTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRLNNYRSVTSVNEFVVLEKD 159
Query: 139 ETGEVYCVVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMAS 186
+ VY VVLESY+VDIP+GN+++DTR+FV TVVK NL LA ++ AS
Sbjct: 160 KKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKSNLQNLAVISTAS 207
>pdb|3K90|A Chain A, The Abscisic Acid Receptor Pyr1 In Complex With Abscisic
Acid
pdb|3K90|B Chain B, The Abscisic Acid Receptor Pyr1 In Complex With Abscisic
Acid
pdb|3K90|C Chain C, The Abscisic Acid Receptor Pyr1 In Complex With Abscisic
Acid
pdb|3K90|D Chain D, The Abscisic Acid Receptor Pyr1 In Complex With Abscisic
Acid
pdb|3QN1|A Chain A, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
Length = 193
Score = 177 bits (448), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 114/160 (71%), Gaps = 3/160 (1%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVG-AGEVGSVR 85
+HT+ P +C+SL Q+I+ P VW VR F P YK+FI+SC+++ VG R
Sbjct: 22 FHTYQLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYKHFIKSCSVEQNFEMRVGCTR 81
Query: 86 DVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYC 145
DV +ISG PA TSTERL++LDDE + F ++GG+HRL NY+SVT+V+ F E+ ++
Sbjct: 82 DVIVISGLPANTSTERLDILDDERRVTGFSIIGGEHRLTNYKSVTTVHRF--EKENRIWT 139
Query: 146 VVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMA 185
VVLESYVVD+PEGNS+DDTR+F TVVKLNL +LA +A A
Sbjct: 140 VVLESYVVDMPEGNSEDDTRMFADTVVKLNLQKLATVAEA 179
>pdb|3K3K|A Chain A, Crystal Structure Of Dimeric Abscisic Acid (Aba) Receptor
Pyrabactin Resistance 1 (Pyr1) With Aba-Bound Closed-Lid
And Aba-Free Open-Lid Subunits
pdb|3K3K|B Chain B, Crystal Structure Of Dimeric Abscisic Acid (Aba) Receptor
Pyrabactin Resistance 1 (Pyr1) With Aba-Bound Closed-Lid
And Aba-Free Open-Lid Subunits
Length = 211
Score = 176 bits (446), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 117/165 (70%), Gaps = 3/165 (1%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVG-AGEVGSVR 85
+HT+ P +C+SL Q+I+ P VW VR F P YK+FI+SC+++ VG R
Sbjct: 40 FHTYQLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYKHFIKSCSVEQNFEMRVGCTR 99
Query: 86 DVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYC 145
DV +ISG PA TSTERL++LDDE + F ++GG+HRL NY+SVT+V+ F E+ ++
Sbjct: 100 DVIVISGLPANTSTERLDILDDERRVTGFSIIGGEHRLTNYKSVTTVHRF--EKENRIWT 157
Query: 146 VVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMASFKST 190
VVLESYVVD+PEGNS+DDTR+F TVVKLNL +LA +A A +++
Sbjct: 158 VVLESYVVDMPEGNSEDDTRMFADTVVKLNLQKLATVAEAMARNS 202
>pdb|3ZVU|A Chain A, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 193
Score = 175 bits (443), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 113/160 (70%), Gaps = 3/160 (1%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVG-AGEVGSVR 85
+HT+ P +C+SL Q+I+ P VW VR F P YK FI+SC+++ VG R
Sbjct: 22 FHTYQLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYKPFIKSCSVEQNFEMRVGCTR 81
Query: 86 DVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYC 145
DV +ISG PA TSTERL++LDDE + F ++GG+HRL NY+SVT+V+ F E+ ++
Sbjct: 82 DVIVISGLPANTSTERLDILDDERRVTGFSIIGGEHRLTNYKSVTTVHRF--EKENRIWT 139
Query: 146 VVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMA 185
VVLESYVVD+PEGNS+DDTR+F TVVKLNL +LA +A A
Sbjct: 140 VVLESYVVDMPEGNSEDDTRMFADTVVKLNLQKLATVAEA 179
>pdb|3NJO|A Chain A, X-Ray Crystal Structure Of The Pyr1-Pyrabactin A Complex
pdb|3NJO|B Chain B, X-Ray Crystal Structure Of The Pyr1-Pyrabactin A Complex
pdb|3NJO|C Chain C, X-Ray Crystal Structure Of The Pyr1-Pyrabactin A Complex
Length = 194
Score = 174 bits (440), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 113/160 (70%), Gaps = 3/160 (1%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVG-AGEVGSVR 85
+HT+ P +C+SL Q+I+ P VW VR F P YK+FI+SC+++ VG R
Sbjct: 23 FHTYQLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYKHFIKSCSVEQNFEMRVGCTR 82
Query: 86 DVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYC 145
DV +ISG A TSTERL++LDDE + F ++GG+HRL NY+SVT+V+ F E+ ++
Sbjct: 83 DVIVISGLSANTSTERLDILDDERRVTGFSIIGGEHRLTNYKSVTTVHRF--EKENRIWT 140
Query: 146 VVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMA 185
VVLESYVVD+PEGNS+DDTR+F TVVKLNL +LA +A A
Sbjct: 141 VVLESYVVDMPEGNSEDDTRMFADTVVKLNLQKLATVAEA 180
>pdb|3OQU|A Chain A, Crystal Structure Of Native Abscisic Acid Receptor Pyl9
With Aba
pdb|3OQU|B Chain B, Crystal Structure Of Native Abscisic Acid Receptor Pyl9
With Aba
Length = 205
Score = 162 bits (409), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRD 86
+H N CTS + + I PL VW VR F P KYK F+ CT+ +G E+GS+R+
Sbjct: 42 HHQHLCRENQCTSALVKHIKAPLHLVWSLVRRFDQPQKYKPFVSRCTV-IGDPEIGSLRE 100
Query: 87 VNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYCV 146
VN+ SG PATTSTERLE+LDDE HIL +++GGDHRL+NY S+ +V+ I E G +
Sbjct: 101 VNVKSGLPATTSTERLELLDDEEHILGIKIIGGDHRLKNYSSILTVHPEIIE--GRAGTM 158
Query: 147 VLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLA 183
V+ES+VVD+P+GN+ D+T FV +++ NL LAD++
Sbjct: 159 VIESFVVDVPQGNTKDETCYFVEALIRCNLKSLADVS 195
>pdb|3QRZ|A Chain A, Crystal Structure Of Native Abscisic Acid Receptor Pyl5 At
2.6 Angstrom
pdb|3QRZ|B Chain B, Crystal Structure Of Native Abscisic Acid Receptor Pyl5 At
2.6 Angstrom
pdb|3QRZ|C Chain C, Crystal Structure Of Native Abscisic Acid Receptor Pyl5 At
2.6 Angstrom
Length = 223
Score = 157 bits (396), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 106/155 (68%), Gaps = 6/155 (3%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVGAG-EVGSVR 85
+HT P+ C S + Q I+ P VW VR F NP YKNFIR C + G G VG +R
Sbjct: 68 HHTHDVGPDQCCSSVVQMIHAPPESVWALVRRFDNPKVYKNFIRQCRIVQGDGLHVGDLR 127
Query: 86 DVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYC 145
+V ++SG PA +STERLE+LD+E H++SF V+GGDHRL+NYRSVT+++ E T
Sbjct: 128 EVMVVSGLPAVSSTERLEILDEERHVISFSVVGGDHRLKNYRSVTTLHASDDEGT----- 182
Query: 146 VVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLA 180
VV+ESY+VD+P GN++++T FV T+V+ NL LA
Sbjct: 183 VVVESYIVDVPPGNTEEETLSFVDTIVRCNLQSLA 217
>pdb|3JRS|A Chain A, Crystal Structure Of (+)-Aba-Bound Pyl1
pdb|3JRS|B Chain B, Crystal Structure Of (+)-Aba-Bound Pyl1
pdb|3JRS|C Chain C, Crystal Structure Of (+)-Aba-Bound Pyl1
Length = 208
Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 110/161 (68%), Gaps = 2/161 (1%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVG-AGEVGSVR 85
+HT+ C+SL+ Q+I+ P VW VR F P YK+FI+SC + VG R
Sbjct: 44 FHTYQLGNGRCSSLLAQRIHAPPETVWSVVRRFDRPQIYKHFIKSCNVSEDFEMRVGCTR 103
Query: 86 DVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDF-ISEETGEVY 144
DVN+ISG PA TS ERL++LDD+ + F + GG+HRL+NY+SVT+V+ F EE ++
Sbjct: 104 DVNVISGLPANTSRERLDLLDDDRRVTGFSITGGEHRLRNYKSVTTVHRFEKEEEEERIW 163
Query: 145 CVVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMA 185
VVLESYVVD+PEGNS++DTRLF TV++LNL +LA + A
Sbjct: 164 TVVLESYVVDVPEGNSEEDTRLFADTVIRLNLQKLASITEA 204
>pdb|3KDJ|A Chain A, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
pdb|3NEF|A Chain A, High-Resolution Pyrabactin-Bound Pyl1 Structure
pdb|3NEF|B Chain B, High-Resolution Pyrabactin-Bound Pyl1 Structure
pdb|3NEG|A Chain A, Pyrabactin-Bound Pyl1 Structure In The Open And Close
Forms
pdb|3NEG|B Chain B, Pyrabactin-Bound Pyl1 Structure In The Open And Close
Forms
Length = 202
Score = 147 bits (372), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 110/161 (68%), Gaps = 2/161 (1%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVG-AGEVGSVR 85
+HT+ C+SL+ Q+I+ P VW VR F P YK+FI+SC + VG R
Sbjct: 28 FHTYQLGNGRCSSLLAQRIHAPPETVWSVVRRFDRPQIYKHFIKSCNVSEDFEMRVGCTR 87
Query: 86 DVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDF-ISEETGEVY 144
DVN+ISG PA TS ERL++LDD+ + F + GG+HRL+NY+SVT+V+ F EE ++
Sbjct: 88 DVNVISGLPANTSRERLDLLDDDRRVTGFSITGGEHRLRNYKSVTTVHRFEKEEEEERIW 147
Query: 145 CVVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMA 185
VVLESYVVD+PEGNS++DTRLF TV++LNL +LA + A
Sbjct: 148 TVVLESYVVDVPEGNSEEDTRLFADTVIRLNLQKLASITEA 188
>pdb|3KAY|A Chain A, Crystal Structure Of Abscisic Acid Receptor Pyl1
pdb|3KAY|B Chain B, Crystal Structure Of Abscisic Acid Receptor Pyl1
pdb|3NMN|A Chain A, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|C Chain C, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 178
Score = 147 bits (371), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 110/161 (68%), Gaps = 2/161 (1%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVG-AGEVGSVR 85
+HT+ C+SL+ Q+I+ P VW VR F P YK+FI+SC + VG R
Sbjct: 14 FHTYQLGNGRCSSLLAQRIHAPPETVWSVVRRFDRPQIYKHFIKSCNVSEDFEMRVGCTR 73
Query: 86 DVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDF-ISEETGEVY 144
DVN+ISG PA TS ERL++LDD+ + F + GG+HRL+NY+SVT+V+ F EE ++
Sbjct: 74 DVNVISGLPANTSRERLDLLDDDRRVTGFSITGGEHRLRNYKSVTTVHRFEKEEEEERIW 133
Query: 145 CVVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMA 185
VVLESYVVD+PEGNS++DTRLF TV++LNL +LA + A
Sbjct: 134 TVVLESYVVDVPEGNSEEDTRLFADTVIRLNLQKLASITEA 174
>pdb|3JRQ|B Chain B, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 186
Score = 147 bits (371), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 110/161 (68%), Gaps = 2/161 (1%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVG-AGEVGSVR 85
+HT+ C+SL+ Q+I+ P VW VR F P YK+FI+SC + VG R
Sbjct: 23 FHTYQLGNGRCSSLLAQRIHAPPETVWSVVRRFDRPQIYKHFIKSCNVSEDFEMRVGCTR 82
Query: 86 DVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDF-ISEETGEVY 144
DVN+ISG PA TS ERL++LDD+ + F + GG+HRL+NY+SVT+V+ F EE ++
Sbjct: 83 DVNVISGLPANTSRERLDLLDDDRRVTGFSITGGEHRLRNYKSVTTVHRFEKEEEEERIW 142
Query: 145 CVVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMA 185
VVLESYVVD+PEGNS++DTRLF TV++LNL +LA + A
Sbjct: 143 TVVLESYVVDVPEGNSEEDTRLFADTVIRLNLQKLASITEA 183
>pdb|3RT2|A Chain A, Crystal Structure Of Apo-Pyl10
Length = 183
Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRD 86
+H + C+S + + I PL VW VR F P KYK FI C ++ EVGSVR+
Sbjct: 17 HHRHELVESQCSSTLVKHIKAPLHLVWSIVRRFDEPQKYKPFISRCVVQGKKLEVGSVRE 76
Query: 87 VNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVN-DFISEETGEVYC 145
V++ SG PAT STE LE+LDD HIL R++GGDHRL+NY S S++ + I +TG
Sbjct: 77 VDLKSGLPATKSTEVLEILDDNEHILGIRIVGGDHRLKNYSSTISLHSETIDGKTG---T 133
Query: 146 VVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADL 182
+ +ES+VVD+PEGN+ ++T FV +++ NL LAD+
Sbjct: 134 LAIESFVVDVPEGNTKEETCFFVEALIQCNLNSLADV 170
>pdb|3UQH|A Chain A, Crystal Strcuture Of Aba Receptor Pyl10 (Apo)
pdb|3UQH|B Chain B, Crystal Strcuture Of Aba Receptor Pyl10 (Apo)
pdb|3R6P|A Chain A, Crystal Structure Of Abscisic Acid-Bound Pyl10
Length = 191
Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRD 86
+H + C+S + + I PL VW VR F P KYK FI C ++ EVGSVR+
Sbjct: 17 HHRHELVESQCSSTLVKHIKAPLHLVWSIVRRFDEPQKYKPFISRCVVQGKKLEVGSVRE 76
Query: 87 VNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVN-DFISEETGEVYC 145
V++ SG PAT STE LE+LDD HIL R++GGDHRL+NY S S++ + I +TG
Sbjct: 77 VDLKSGLPATKSTEVLEILDDNEHILGIRIVGGDHRLKNYSSTISLHSETIDGKTG---T 133
Query: 146 VVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADL 182
+ +ES+VVD+PEGN+ ++T FV +++ NL LAD+
Sbjct: 134 LAIESFVVDVPEGNTKEETCFFVEALIQCNLNSLADV 170
>pdb|3RT0|C Chain C, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|D Chain D, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 183
Score = 144 bits (364), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 27 YHTFPPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRD 86
+H + C+S + + I PL VW VR F P KYK FI C ++ EVGSVR+
Sbjct: 17 HHRHELVESQCSSTLVKHIKAPLHLVWSIVRRFDEPQKYKPFISRCVVQGKKLEVGSVRE 76
Query: 87 VNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVN-DFISEETGEVYC 145
V++ SG PAT STE LE+LDD HIL R++GGDHRL+NY S S++ + I +TG
Sbjct: 77 VDLKSGLPATKSTEVLEILDDNEHILGIRIVGGDHRLKNYSSTISLHSETIDGKTG---T 133
Query: 146 VVLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADL 182
+ +ES+VVD+PEGN+ ++T FV +++ NL LAD+
Sbjct: 134 LAIESFVVDVPEGNTKEETCFFVEALIQSNLNSLADV 170
>pdb|2I9Y|A Chain A, Solution Structure Of Arabidopsis Thaliana Protein
At1g70830, A Member Of The Major Latex Protein Family
Length = 166
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 69 IRSCTMKVG-AGEVGSVRDVNIISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYR 127
I+ C + G G VGS+ N + A + ER+E ++ + ++++FRV+ GD ++ Y+
Sbjct: 51 IQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGD-LMKEYK 109
Query: 128 S 128
S
Sbjct: 110 S 110
>pdb|3F08|A Chain A, Crystal Structure Of The Putative Uncharacterized Protein
Q6hg14 From Bacilllus Thuringiensis. Northeast
Structural Genomics Consortium Target Bur153.
pdb|3F08|B Chain B, Crystal Structure Of The Putative Uncharacterized Protein
Q6hg14 From Bacilllus Thuringiensis. Northeast
Structural Genomics Consortium Target Bur153
Length = 146
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 52 VWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRDVNIISGPPATTSTERLEMLDDENHI 111
VW + F + + +I S + G G VR ++ P T ERLE+ +D+
Sbjct: 17 VWQLIGGFNSLPDWLPYIPSSKLTEG----GRVRH---LANPDGETIIERLEVFNDKERY 69
Query: 112 LSFRVLGGDHRLQNYRSVTSVND 134
++ + + NY S V +
Sbjct: 70 YTYSIXNAPFPVTNYLSTIQVKE 92
>pdb|3CNW|A Chain A, Three-Dimensional Structure Of The Protein Xoxi (Q81ay6)
From Bacillus Cereus. Northeast Structural Genomics
Consortium Target Bcr196.
pdb|3CNW|B Chain B, Three-Dimensional Structure Of The Protein Xoxi (Q81ay6)
From Bacillus Cereus. Northeast Structural Genomics
Consortium Target Bcr196
Length = 148
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 52 VWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRDVNIISGPPATTSTERLEMLDDENHI 111
VW + F + + +I S + G G VR ++ P T ERLE+ +D+
Sbjct: 19 VWQLIGGFNSLPDWLPYIPSSKLTEG----GRVRH---LANPDGDTIIERLEVFNDKERY 71
Query: 112 LSFRVLGGDHRLQNYRSVTSVND 134
++ + + NY S V +
Sbjct: 72 YTYSIXNAPFPVTNYLSTIQVKE 94
>pdb|4E0B|A Chain A, 2.17 Angstrom Resolution Crystal Structure Of Malate
Dehydrogenase From Vibrio Vulnificus Cmcp6
pdb|4E0B|B Chain B, 2.17 Angstrom Resolution Crystal Structure Of Malate
Dehydrogenase From Vibrio Vulnificus Cmcp6
pdb|4E0B|C Chain C, 2.17 Angstrom Resolution Crystal Structure Of Malate
Dehydrogenase From Vibrio Vulnificus Cmcp6
pdb|4E0B|D Chain D, 2.17 Angstrom Resolution Crystal Structure Of Malate
Dehydrogenase From Vibrio Vulnificus Cmcp6
Length = 313
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 34 PNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNF-------IRSCTM--KVGAGEVGSV 84
PN C +IT +NT + ++ DK K F IRS T ++ + G V
Sbjct: 113 PNACIGIITNPVNTTVPIAAEVLKKAGVYDKRKLFGVTTLDVIRSETFVAELKGQDPGEV 172
Query: 85 RDVNIISGP------PATTSTERLEMLDDENHILSFRV 116
R V +I G P + E +E D+E L+ R+
Sbjct: 173 R-VPVIGGHSGVTILPLLSQVEGVEFSDEEIAALTKRI 209
>pdb|3H3L|A Chain A, Crystal Structure Of Putative Sugar Hydrolase
(Yp_001304206.1) From Parabacteroides Distasonis Atcc
8503 At 1.59 A Resolution
pdb|3H3L|B Chain B, Crystal Structure Of Putative Sugar Hydrolase
(Yp_001304206.1) From Parabacteroides Distasonis Atcc
8503 At 1.59 A Resolution
pdb|3H3L|C Chain C, Crystal Structure Of Putative Sugar Hydrolase
(Yp_001304206.1) From Parabacteroides Distasonis Atcc
8503 At 1.59 A Resolution
Length = 241
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 58 DFTNPDKYKNFIRSCTMKV-GAGEVGSVRDVNIISGPPATTSTERLEMLDDEN 109
D K+KNF+ K+ AG G I G P S+ ++LD+EN
Sbjct: 69 DLIYDKKFKNFVFEIEWKIDKAGNSGIFYTAQEIEGTPIYYSSPEYQLLDNEN 121
>pdb|2NMT|A Chain A, Myristoyl-Coa:protein N-Myristoyltransferase Bound To
Myristoyl-Coa And Peptide Analogs
pdb|1IIC|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoylcoa
pdb|1IIC|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoylcoa
pdb|1IID|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae N-
Myristoyltransferase With Bound S-(2-Oxo)pentadecylcoa
And The Octapeptide Glyaskla
Length = 422
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 94 PATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSV-------NDFISEETGEVYCV 146
PA T T L L E+ F + R Q+ + + ++FI EE+ +
Sbjct: 220 PAKTKTAGLRKLKKEDIDQVFELF---KRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQ 276
Query: 147 VLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMA 185
V+ SYVV+ P+G D + LN + DL +
Sbjct: 277 VIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIG 315
>pdb|4F6L|B Chain B, Crystal Structure Of Aureusimine Biosynthetic Cluster
Reductase Domain
pdb|4F6L|A Chain A, Crystal Structure Of Aureusimine Biosynthetic Cluster
Reductase Domain
Length = 508
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 89 IISGPPATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSVNDFISEETGEVYCVVL 148
+++G +E L +H + + + + Y+ +T++ND+ SEET E+ +
Sbjct: 154 LLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNI 213
Query: 149 ESYVVD 154
E V D
Sbjct: 214 EVIVGD 219
>pdb|2BK0|A Chain A, Crystal Structure Of The Major Celery Allergen Api G 1
pdb|2BK0|B Chain B, Crystal Structure Of The Major Celery Allergen Api G 1
Length = 154
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 62 PDKYKNFIRSCTMKVGAGEVGSVRDVNIISGPPATTSTERLEMLDDENHILSFRVLGGDH 121
P YK S +K G G G+++ + + G P TT T R++ ++ E + V+ GD
Sbjct: 36 PGAYK----SVEIK-GDGGPGTLKIITLPDGGPITTMTLRIDGVNKEALTFDYSVIDGDI 90
Query: 122 RLQNYRSV 129
L S+
Sbjct: 91 LLGFIESI 98
>pdb|2P6E|A Chain A, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa
pdb|2P6E|B Chain B, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa
pdb|2P6E|C Chain C, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa
pdb|2P6E|D Chain D, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa
pdb|2P6E|E Chain E, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa
pdb|2P6E|F Chain F, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa
pdb|2P6F|A Chain A, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa And
Inhibitors
pdb|2P6F|B Chain B, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa And
Inhibitors
pdb|2P6F|C Chain C, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa And
Inhibitors
pdb|2P6F|D Chain D, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa And
Inhibitors
pdb|2P6F|E Chain E, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa And
Inhibitors
pdb|2P6F|F Chain F, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa And
Inhibitors
pdb|2P6G|A Chain A, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa And
Inhibitors
pdb|2P6G|B Chain B, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa And
Inhibitors
pdb|2P6G|C Chain C, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa And
Inhibitors
pdb|2P6G|D Chain D, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa And
Inhibitors
pdb|2P6G|E Chain E, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa And
Inhibitors
pdb|2P6G|F Chain F, Crystal Structures Of Saccharomyces Cerevisiae
N-Myristoyltransferase With Bound Myristoyl-Coa And
Inhibitors
Length = 455
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 94 PATTSTERLEMLDDENHILSFRVLGGDHRLQNYRSVTSV-------NDFISEETGEVYCV 146
PA T T L L E+ F + R Q+ + + ++FI EE+ +
Sbjct: 253 PAKTKTAGLRKLKKEDIDQVFELF---KRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQ 309
Query: 147 VLESYVVDIPEGNSDDDTRLFVGTVVKLNLARLADLAMA 185
V+ SYVV+ P+G D + LN + DL +
Sbjct: 310 VIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIG 348
>pdb|3IE5|A Chain A, Crystal Structure Of Hyp-1 Protein From Hypericum
Perforatum (St John's Wort) Involved In Hypericin
Biosynthesis
pdb|3IE5|B Chain B, Crystal Structure Of Hyp-1 Protein From Hypericum
Perforatum (St John's Wort) Involved In Hypericin
Biosynthesis
Length = 165
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 67 NFIRSCTMKVGAGEVGSVRDVNIISGPPATTSTERLEMLDDENHILSFRVLGGD 120
+ +S + G G VG+V + + G P T + + +D N + + GD
Sbjct: 43 HVFKSGEIIEGDGGVGTVTKITFVDGHPLTYMLHKFDEIDAANFYCKYTLFEGD 96
>pdb|3KYS|B Chain B, Crystal Structure Of Human Yap And Tead Complex
pdb|3KYS|D Chain D, Crystal Structure Of Human Yap And Tead Complex
Length = 125
Score = 26.9 bits (58), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 14/82 (17%)
Query: 31 PPSPNTCTSLITQKINTPLSFVWPFVRDFTNPDKYKNFIRSCTMKVGAGEVGSVRDVNII 90
PP P + + + T + VR ++P ++++GA G++ ++
Sbjct: 52 PPEPKSHSRQASTDAGTAGALTPQHVRAHSSP---------ASLQLGAVSPGTLTPTGVV 102
Query: 91 SGPPATTSTERL-----EMLDD 107
SGP AT + + L E+ DD
Sbjct: 103 SGPAATPTAQHLRQSSFEIPDD 124
>pdb|1IK6|A Chain A, 3d Structure Of The E1beta Subunit Of Pyruvate
Dehydrogenase From The Archeon Pyrobaculum Aerophilum
Length = 369
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 153 VDIPEGNSDDDTRLFVGTVVKLNLARLADLAM 184
+D P+ +DDD ++ G V+ N+A+ ++A+
Sbjct: 30 MDSPDLGTDDDDKMVAGVVMMANMAKAINMAL 61
>pdb|2WQL|A Chain A, Crystal Structure Of The Major Carrot Allergen Dau C 1
pdb|2WQL|B Chain B, Crystal Structure Of The Major Carrot Allergen Dau C 1
pdb|2WQL|C Chain C, Crystal Structure Of The Major Carrot Allergen Dau C 1
pdb|2WQL|D Chain D, Crystal Structure Of The Major Carrot Allergen Dau C 1
Length = 154
Score = 26.6 bits (57), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 58 DFTNPDKYKNFIRSCTMKVGAGEVGSVRDVNIISGPPATTSTERLEMLDDENHILSFRVL 117
D P +S +K G G G+VR + + G P TT T R + ++ E V+
Sbjct: 28 DTVIPKAATGAYKSVEVK-GDGGAGTVRIITLPEGSPITTMTVRTDAVNKEALSYDSTVI 86
Query: 118 GGDHRLQNYRSV 129
GD L S+
Sbjct: 87 DGDILLGFIESI 98
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,270,768
Number of Sequences: 62578
Number of extensions: 203480
Number of successful extensions: 500
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 430
Number of HSP's gapped (non-prelim): 43
length of query: 192
length of database: 14,973,337
effective HSP length: 93
effective length of query: 99
effective length of database: 9,153,583
effective search space: 906204717
effective search space used: 906204717
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)