Query 047054
Match_columns 316
No_of_seqs 132 out of 1331
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 12:22:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047054.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047054hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 5.4E-73 1.9E-77 519.3 27.9 289 6-298 3-308 (312)
2 1gp6_A Leucoanthocyanidin diox 100.0 5.4E-70 1.9E-74 507.2 29.1 283 8-299 45-345 (356)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 5.1E-70 1.7E-74 500.0 20.9 279 8-299 2-293 (319)
4 1odm_A Isopenicillin N synthas 100.0 2.2E-68 7.6E-73 492.3 26.4 285 1-299 1-324 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 2.9E-68 9.9E-73 487.3 17.4 275 7-300 2-306 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 6.1E-65 2.1E-69 458.6 26.1 266 8-299 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 95.1 0.058 2E-06 46.6 7.7 78 163-261 100-194 (243)
8 2hbt_A EGL nine homolog 1; pro 89.0 1.1 3.7E-05 38.6 7.4 81 164-262 119-213 (247)
9 2rg4_A Uncharacterized protein 88.2 2.2 7.5E-05 35.8 8.6 43 210-264 166-209 (216)
10 3itq_A Prolyl 4-hydroxylase, a 86.0 3.1 0.00011 34.9 8.3 86 163-262 112-212 (216)
11 2jig_A Prolyl-4 hydroxylase; h 85.2 2 7E-05 36.0 6.9 48 212-263 170-218 (224)
12 2iuw_A Alkylated repair protei 76.2 19 0.00063 30.5 9.8 44 210-261 184-229 (238)
13 1otj_A Alpha-ketoglutarate-dep 69.1 4 0.00014 35.4 4.0 49 8-59 16-64 (283)
14 3s57_A Alpha-ketoglutarate-dep 65.7 36 0.0012 28.0 9.0 41 211-259 158-200 (204)
15 2opi_A L-fuculose-1-phosphate 65.3 3.4 0.00012 34.4 2.6 36 9-44 125-160 (212)
16 3tht_A Alkylated DNA repair pr 64.7 14 0.00048 33.2 6.7 82 182-264 210-315 (345)
17 1oih_A Putative alkylsulfatase 63.8 6.1 0.00021 34.6 4.1 50 9-61 27-77 (301)
18 3o2g_A Gamma-butyrobetaine dio 63.0 3.8 0.00013 37.6 2.7 50 9-61 122-172 (388)
19 3pvj_A Alpha-ketoglutarate-dep 58.5 7.2 0.00025 33.9 3.6 50 8-60 14-63 (277)
20 1e4c_P L-fuculose 1-phosphate 58.2 5.3 0.00018 33.3 2.5 36 9-44 122-157 (215)
21 2fk5_A Fuculose-1-phosphate al 57.8 5.8 0.0002 32.7 2.7 36 9-44 117-153 (200)
22 3i3q_A Alpha-ketoglutarate-dep 57.2 31 0.001 28.6 7.1 69 182-260 117-201 (211)
23 1pvt_A Sugar-phosphate aldolas 56.0 6.7 0.00023 33.2 2.9 37 8-44 160-196 (238)
24 3r1j_A Alpha-ketoglutarate-dep 55.5 11 0.00037 33.2 4.2 50 8-60 20-70 (301)
25 2dbn_A Hypothetical protein YB 51.1 4.2 0.00014 38.0 0.8 54 7-61 98-151 (461)
26 2v9l_A Rhamnulose-1-phosphate 49.4 7.3 0.00025 33.8 2.0 36 9-44 179-214 (274)
27 3ocr_A Class II aldolase/adduc 40.8 14 0.00047 32.1 2.4 37 8-44 155-192 (273)
28 3ghf_A Septum site-determining 38.5 22 0.00077 26.6 3.0 42 12-53 51-93 (120)
29 2ld7_A Histone deacetylase com 37.7 64 0.0022 23.1 5.1 57 5-70 14-71 (94)
30 2irp_A Putative aldolase class 37.2 12 0.00041 30.8 1.4 36 8-44 138-176 (208)
31 3eat_X Pyoverdine biosynthesis 34.9 23 0.00079 30.8 3.0 48 10-60 31-80 (293)
32 1nx8_A CARC, carbapenem syntha 31.7 13 0.00044 31.9 0.7 43 10-59 19-61 (273)
33 1m5a_B Insulin B chain; alpha 26.8 66 0.0023 17.8 2.8 17 22-38 10-26 (30)
34 4ay7_A Methylcobalamin\: coenz 26.0 92 0.0032 27.5 5.5 40 22-61 305-348 (348)
35 2z7b_A MLR6791 protein; class 24.1 37 0.0013 29.2 2.3 36 9-44 157-201 (270)
36 2k6o_A Cathelicidin antimicrob 23.7 6 0.00021 22.9 -1.9 14 303-316 17-30 (37)
37 4f3y_A DHPR, dihydrodipicolina 22.6 90 0.0031 26.8 4.5 43 12-57 77-120 (272)
38 3m4r_A Uncharacterized protein 22.5 25 0.00086 29.3 0.9 34 10-44 156-190 (222)
39 3kt7_A PKHD-type hydroxylase T 22.2 1.4E+02 0.0049 28.9 6.1 70 183-261 137-227 (633)
40 3ijp_A DHPR, dihydrodipicolina 21.9 97 0.0033 26.9 4.6 43 12-57 92-135 (288)
41 2fcg_F Cationic, antibacterial 21.5 5.1 0.00017 21.4 -2.3 13 304-316 6-18 (26)
42 2da7_A Zinc finger homeobox pr 20.1 55 0.0019 22.1 2.0 41 116-158 14-54 (71)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=5.4e-73 Score=519.26 Aligned_cols=289 Identities=21% Similarity=0.352 Sum_probs=247.7
Q ss_pred CCCCCceEeCCCCC--ChHHHHHHHHHHHhccEEEEEeCCCCHHHHHHHHHHHHhhcCCChhhhhccCC-CCCCCCcccC
Q 047054 6 TSVELPVLDISQPL--SPSALSSLSRACEEWGFFYITNHGVSKHLYRRLHSLSNQLFDLPYESKLKVGP-SSSTKTYTPH 82 (316)
Q Consensus 6 ~~~~iPvIDls~~~--~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~-~~~~~Gy~~~ 82 (316)
+..+||||||+.+. +.+++++|++||+++|||||+||||+.++++++++.+++||+||.|+|+++.. ....+||.+.
T Consensus 3 ~~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 82 (312)
T 3oox_A 3 STSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPF 82 (312)
T ss_dssp -CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECC
T ss_pred CCCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccc
Confidence 35789999999763 34578999999999999999999999999999999999999999999999975 3457899765
Q ss_pred cCC-------CCccccccccCCCc--ccccccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhh
Q 047054 83 FIA-------SPFFESIRVSGPEF--FASAKATVDVLFDEPPSELSETLKEYGNKLTELSKTIVKIVLTSLGEHFQKKFY 153 (316)
Q Consensus 83 ~~~-------~~~~e~~~~~~~~~--~~~~~~~~~~~~p~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lg~~~~~~~~ 153 (316)
+.+ .+++|.+.+..... ........++.||+.+|+||+.+++|+++|.+++..|+++|+++|| +++++|
T Consensus 83 g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lg--l~~~~f 160 (312)
T 3oox_A 83 GVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLK--LERDFF 160 (312)
T ss_dssp CCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTT--SCTTTT
T ss_pred cceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cCHHHH
Confidence 533 24566665532110 0001123467899999999999999999999999999999999999 568899
Q ss_pred hhhhcCccceeeecccCCCCCCCccccCcccccCCCCCeEEEEeCCCCceeEEccCCCeEEecCCCCeEEEEcchhhHHH
Q 047054 154 ESEFKNCHGYLRIINYSPPEDVEKNEVEGLGMHTDMSCITIVYQDQIGGLQVRSKQGKWMNINPCEDTLIVNIGDLMHAW 233 (316)
Q Consensus 154 ~~~~~~~~~~lrl~~Y~p~~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~g~~vvn~Gd~l~~~ 233 (316)
.+.+..+.+.||++|||| ++.... .+|+++|||+|+||||+||+++||||++++|+|++|+|++|++|||+||+||+|
T Consensus 161 ~~~~~~~~~~lr~~~Ypp-~~~~~~-~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~ 238 (312)
T 3oox_A 161 KPTVQDGNSVLRLLHYPP-IPKDAT-GVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERL 238 (312)
T ss_dssp HHHHTTCCCEEEEEEECC-CSSCCC---CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHH
T ss_pred HHHhcCCcceeeeEecCC-CCCCcC-CcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHH
Confidence 999988888999999955 433233 389999999999999999999999999899999999999999999999999999
Q ss_pred hCCcccCCCCeeecCC----CCceEEEEEcccCCCCceEeCCcccccCCCCCCCC-CccHHHHHHHHHhh
Q 047054 234 CNGKLRSSEHRVVLKR----CVNRLSLAFFWCFEDEKRIFAPDEVVGLGNLRRYK-PFVCADYLKFRESS 298 (316)
Q Consensus 234 TnG~~~s~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y~-~~~~~e~~~~~~~~ 298 (316)
|||+|||++|||+.++ ..+||||+||++|+.|++|.|+++++++++|++|+ ++|++||+..|++.
T Consensus 239 TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 239 TNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp TTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred hCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 9999999999998763 46799999999999999999999999999999999 99999999999874
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=5.4e-70 Score=507.22 Aligned_cols=283 Identities=22% Similarity=0.361 Sum_probs=245.3
Q ss_pred CCCceEeCCCCCC--h----HHHHHHHHHHHhccEEEEEeCCCCHHHHHHHHHHHHhhcCCChhhhhccCCC---CCCCC
Q 047054 8 VELPVLDISQPLS--P----SALSSLSRACEEWGFFYITNHGVSKHLYRRLHSLSNQLFDLPYESKLKVGPS---SSTKT 78 (316)
Q Consensus 8 ~~iPvIDls~~~~--~----~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~---~~~~G 78 (316)
.+||||||+.+.. + +++++|++||+++|||||+||||+.++++++++.+++||+||.|+|+++... ..++|
T Consensus 45 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~G 124 (356)
T 1gp6_A 45 PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 124 (356)
T ss_dssp CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSE
T ss_pred CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccc
Confidence 4699999999753 2 3679999999999999999999999999999999999999999999999654 24788
Q ss_pred cccCcCC-----CCccccccccCCCcccccccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhh
Q 047054 79 YTPHFIA-----SPFFESIRVSGPEFFASAKATVDVLFDEPPSELSETLKEYGNKLTELSKTIVKIVLTSLGEHFQKKFY 153 (316)
Q Consensus 79 y~~~~~~-----~~~~e~~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lg~~~~~~~~ 153 (316)
|...... .+++|.+.+... .......+.||..+|+||+.+++|+++|.+|+..|+++|+++|| +++++|
T Consensus 125 y~~~~~~~~~~~~d~kE~~~~~~~----p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg--l~~~~f 198 (356)
T 1gp6_A 125 YGSKLANNASGQLEWEDYFFHLAY----PEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLG--LEPDRL 198 (356)
T ss_dssp EECCCCCSTTCCCCSCEEEEEEEE----SGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTT--SCTTHH
T ss_pred cCcCcccCCCCCCChhheeeeecC----CccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcC--CCHHHH
Confidence 8765421 234554443210 00113467899999999999999999999999999999999999 568899
Q ss_pred hhhhc---CccceeeecccCCCCCCCccccCcccccCCCCCeEEEEeCCCCceeEEccCCCeEEecCCCCeEEEEcchhh
Q 047054 154 ESEFK---NCHGYLRIINYSPPEDVEKNEVEGLGMHTDMSCITIVYQDQIGGLQVRSKQGKWMNINPCEDTLIVNIGDLM 230 (316)
Q Consensus 154 ~~~~~---~~~~~lrl~~Y~p~~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~g~~vvn~Gd~l 230 (316)
.+.+. .+.+.||++||| +++. ++...|+++|||+|+||||+||.++||||+ ++|+|++|+|.+|++|||+||+|
T Consensus 199 ~~~~~~~~~~~~~lrl~~YP-p~~~-~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~l 275 (356)
T 1gp6_A 199 EKEVGGLEELLLQMKINYYP-KCPQ-PELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGDTL 275 (356)
T ss_dssp HHHTTHHHHCEEEEEEEEEC-CCSS-TTTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCCCTTCEEEEECHHH
T ss_pred HHHhcccCCccceeeeeecC-CCCC-cccccCcCCccCCCeEEEEEEcCCCCeEEe-cCCcEEECcCCCCeEEEEeccHH
Confidence 98886 467789998885 4553 456789999999999999999999999999 79999999999999999999999
Q ss_pred HHHhCCcccCCCCeeecCCCCceEEEEEcccCCCCc-eEeCCcccccCCCCCCCCCccHHHHHHHHHhhc
Q 047054 231 HAWCNGKLRSSEHRVVLKRCVNRLSLAFFWCFEDEK-RIFAPDEVVGLGNLRRYKPFVCADYLKFRESSV 299 (316)
Q Consensus 231 ~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~-~i~p~~~~~~~~~~~~y~~~~~~e~~~~~~~~~ 299 (316)
|+||||+|||++|||+.++..+|||++||++|+.|+ +|.|+++++++++|++|+++|++||+..++++.
T Consensus 276 ~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~ 345 (356)
T 1gp6_A 276 EILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGK 345 (356)
T ss_dssp HHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHH
T ss_pred HHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHhc
Confidence 999999999999999998889999999999999999 999999999998999999999999999887643
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=5.1e-70 Score=500.05 Aligned_cols=279 Identities=23% Similarity=0.469 Sum_probs=236.4
Q ss_pred CCCceEeCCCCC---ChHHHHHHHHHHHhccEEEEEeCCCCHHHHHHHHHHHHhhcCCChhhhhccCCCCCCCCcccCcC
Q 047054 8 VELPVLDISQPL---SPSALSSLSRACEEWGFFYITNHGVSKHLYRRLHSLSNQLFDLPYESKLKVGPSSSTKTYTPHFI 84 (316)
Q Consensus 8 ~~iPvIDls~~~---~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~~~~ 84 (316)
.+||||||+.+. +.+++++|++||+++|||||+|||||.++++++++.+++||+||.|+|+++... .+||.+...
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~--~~Gy~~~~~ 79 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA--SKALEGVQA 79 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTCCC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CCCCCcccc
Confidence 469999999864 245789999999999999999999999999999999999999999999998532 247765432
Q ss_pred C---CCccccccccCCCcccccccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhhhhhcC--
Q 047054 85 A---SPFFESIRVSGPEFFASAKATVDVLFDEPPSELSETLKEYGNKLTELSKTIVKIVLTSLGEHFQKKFYESEFKN-- 159 (316)
Q Consensus 85 ~---~~~~e~~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lg~~~~~~~~~~~~~~-- 159 (316)
+ .++.|.+.+.. ......+.||+.+|.||+.+++|+++|.+++..|+++|+++|| +++++|.+.+..
T Consensus 80 e~~~~d~ke~~~~~~------~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg--l~~~~f~~~~~~~~ 151 (319)
T 1w9y_A 80 EVTDMDWESTFFLKH------LPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLG--LEKGYLKNAFYGSK 151 (319)
T ss_dssp CGGGCCCCEEEEEEE------ESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CCTTHHHHHHHTTT
T ss_pred cCCCCChhhheeeec------CCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCHHHHHHHhcCcC
Confidence 2 23444443321 0112357899999999999999999999999999999999999 568899888863
Q ss_pred -ccceeeecccCCCCCCCccccCcccccCCCCCeEEEEeC-CCCceeEEccCCCeEEecCCCCeEEEEcchhhHHHhCCc
Q 047054 160 -CHGYLRIINYSPPEDVEKNEVEGLGMHTDMSCITIVYQD-QIGGLQVRSKQGKWMNINPCEDTLIVNIGDLMHAWCNGK 237 (316)
Q Consensus 160 -~~~~lrl~~Y~p~~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~v~p~~g~~vvn~Gd~l~~~TnG~ 237 (316)
+.+.||++||| ++++ ++...|+++|||+|+||||+|| .++||||+ ++|+|++|+|.||++|||+||+||+||||+
T Consensus 152 ~~~~~lrl~~YP-p~~~-~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~ 228 (319)
T 1w9y_A 152 GPNFGTKVSNYP-PCPK-PDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVITNGK 228 (319)
T ss_dssp CCEEEEEEEECC-CCSC-GGGGSSCCCBCCSSSEEEEEESSSCCCEEEE-ETTEEEECCCCTTCEEEEECHHHHHHTTTS
T ss_pred CccceeEEEecC-CCcc-cccccccccccCCCceEEEEecCCCCeeeEe-eCCeEEEcccCCCcEEEEhHHHHHHHhCCe
Confidence 55789998885 5553 5567899999999999999995 79999998 789999999999999999999999999999
Q ss_pred ccCCCCeeecCCCCceEEEEEcccCCCCceEeCCcccccCC---CCCCCCCccHHHHHHHHHhhc
Q 047054 238 LRSSEHRVVLKRCVNRLSLAFFWCFEDEKRIFAPDEVVGLG---NLRRYKPFVCADYLKFRESSV 299 (316)
Q Consensus 238 ~~s~~HRV~~~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~---~~~~y~~~~~~e~~~~~~~~~ 299 (316)
|||++|||+.++..+|||++||++|+.|++|.|++++++++ +|++|+++|++||+..++++.
T Consensus 229 ~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~ 293 (319)
T 1w9y_A 229 YKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLK 293 (319)
T ss_dssp SCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTT
T ss_pred eecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhh
Confidence 99999999998889999999999999999999999999887 599999999999999887654
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=2.2e-68 Score=492.27 Aligned_cols=285 Identities=21% Similarity=0.314 Sum_probs=241.9
Q ss_pred CCCCCCCCCCceEeCCCCCC------hHHHHHHHHHHHhccEEEEEeCCCCHHHHHHHHHHHHhh-cCCChhhhhccCCC
Q 047054 1 MSETWTSVELPVLDISQPLS------PSALSSLSRACEEWGFFYITNHGVSKHLYRRLHSLSNQL-FDLPYESKLKVGPS 73 (316)
Q Consensus 1 ~~~~~~~~~iPvIDls~~~~------~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~ 73 (316)
|+|. ...+||||||+.+.. .+++++|++||+++|||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 1 m~s~-~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~- 75 (331)
T 1odm_A 1 MGSV-SKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI- 75 (331)
T ss_dssp --CC-CBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-
T ss_pred CCcc-cCCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-
Confidence 5544 467899999998742 236899999999999999999999 999999999999 9999999999965
Q ss_pred CCCCCcccCcCC-------------CCccccccccCCCccccc------ccccccCCCCC--CchHHHHHHHHHHHHHHH
Q 047054 74 SSTKTYTPHFIA-------------SPFFESIRVSGPEFFASA------KATVDVLFDEP--PSELSETLKEYGNKLTEL 132 (316)
Q Consensus 74 ~~~~Gy~~~~~~-------------~~~~e~~~~~~~~~~~~~------~~~~~~~~p~~--~~~f~~~~~~y~~~~~~l 132 (316)
+||.+.+.+ .+++|.+.+......... .....+.||+. +|+||+.+++|+++|.++
T Consensus 76 ---~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l 152 (331)
T 1odm_A 76 ---RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGL 152 (331)
T ss_dssp ---TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHH
T ss_pred ---cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence 677655432 245666655321100000 01236789987 899999999999999999
Q ss_pred HHHHHHHHHHHcCCCcchhhhhhhhcCccceee--ecccC------C--CCCCCccc-cCcccccCCCCCeEEEEeCCCC
Q 047054 133 SKTIVKIVLTSLGEHFQKKFYESEFKNCHGYLR--IINYS------P--PEDVEKNE-VEGLGMHTDMSCITIVYQDQIG 201 (316)
Q Consensus 133 ~~~ll~~la~~Lg~~~~~~~~~~~~~~~~~~lr--l~~Y~------p--~~~~~~~~-~~~~~~HtD~~~lTlL~qd~~~ 201 (316)
+..|+++|+++|| +++++|.+.+..+.+.|| ++||| | .+++ ++. .+|+++|||+|+||||+||+++
T Consensus 153 ~~~ll~~la~~Lg--l~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~-~~~~~~g~~~HtD~g~lTlL~qd~v~ 229 (331)
T 1odm_A 153 SSALLKGYALALG--KEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTA-ADGTKLSFEWHEDVSLITVLYQSNVQ 229 (331)
T ss_dssp HHHHHHHHHHHTT--SCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEEC-TTSCEEEEEEECCSSSEEEEEECSSC
T ss_pred HHHHHHHHHHHhC--CCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCC-ccccccccccccCCCeEEEEeeCCCC
Confidence 9999999999999 668899999888888999 99997 4 2543 333 7899999999999999999999
Q ss_pred ceeEEccCCCeEEecCCCCeEEEEcchhhHHHhCCcccCCCCeeecCCCCceEEEEEcccCCCCceEeCCcccccCCCCC
Q 047054 202 GLQVRSKQGKWMNINPCEDTLIVNIGDLMHAWCNGKLRSSEHRVVLKRCVNRLSLAFFWCFEDEKRIFAPDEVVGLGNLR 281 (316)
Q Consensus 202 GLqv~~~~g~W~~v~p~~g~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~ 281 (316)
||||++++| |++|+|.+|++|||+||+||+||||+|||++|||+.+ ..+||||+||++|+.|++|.|+++++++++ +
T Consensus 230 GLQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~ 306 (331)
T 1odm_A 230 NLQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-S 306 (331)
T ss_dssp CEEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-C
T ss_pred CEEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-c
Confidence 999999899 9999999999999999999999999999999999975 689999999999999999999999998877 8
Q ss_pred CCCCccHHHHHHHHHhhc
Q 047054 282 RYKPFVCADYLKFRESSV 299 (316)
Q Consensus 282 ~y~~~~~~e~~~~~~~~~ 299 (316)
+|++++++||++.++++.
T Consensus 307 ~y~~~t~~e~l~~~~~~~ 324 (331)
T 1odm_A 307 DREPLSYGDYLQNGLVSL 324 (331)
T ss_dssp SSCCCBHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHH
Confidence 999999999999998654
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=2.9e-68 Score=487.28 Aligned_cols=275 Identities=17% Similarity=0.230 Sum_probs=229.4
Q ss_pred CCCCceEeCCCCCChHHHHHHHHHHHhccEEEEEeCCCCHHHHHHHHHHHHhhcCCC-hhhhhccCCC--CCCCCcccCc
Q 047054 7 SVELPVLDISQPLSPSALSSLSRACEEWGFFYITNHGVSKHLYRRLHSLSNQLFDLP-YESKLKVGPS--SSTKTYTPHF 83 (316)
Q Consensus 7 ~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~--~~~~Gy~~~~ 83 (316)
..+||||||+.+.+++..++|++||+++|||||+|||||.++++++++.+++||+|| .|+|+++... ...+||.+.+
T Consensus 2 ~~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~ 81 (311)
T 1dcs_A 2 DTTVPTFSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLE 81 (311)
T ss_dssp CCCCCEEEHHHHHTTCSHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC-
T ss_pred CCCCcEEEchhhcCCCHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeecc
Confidence 467999999876433334599999999999999999999999999999999999999 9999999754 3578998765
Q ss_pred CCC-----------CccccccccCCCcccccccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--ch
Q 047054 84 IAS-----------PFFESIRVSGPEFFASAKATVDVLFDEPPSELSETLKEYGNKLTELSKTIVKIVLTSLGEHF--QK 150 (316)
Q Consensus 84 ~~~-----------~~~e~~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lg~~~--~~ 150 (316)
.+. +++|.+.+.. .++.|| +|+||+.+++|+++|.+++..|+++|+++||+.. ++
T Consensus 82 ~e~~~~~~~~~~~~d~~E~~~~~~----------~~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~ 149 (311)
T 1dcs_A 82 SESTAQITNTGSYSDYSMCYSMGT----------ADNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGV 149 (311)
T ss_dssp ----------------CEEEEECS----------SSCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCH
T ss_pred ccccccccCCCCCCCcceeeeccC----------CCCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcH
Confidence 321 2333333321 156799 8999999999999999999999999999999411 57
Q ss_pred hhhhhhhcCccceeeecccCCCCCCC-ccc--cCcccccCCCCCeEEEEeC-CCCc---eeEEccCCCeEEecCCCCeEE
Q 047054 151 KFYESEFKNCHGYLRIINYSPPEDVE-KNE--VEGLGMHTDMSCITIVYQD-QIGG---LQVRSKQGKWMNINPCEDTLI 223 (316)
Q Consensus 151 ~~~~~~~~~~~~~lrl~~Y~p~~~~~-~~~--~~~~~~HtD~~~lTlL~qd-~~~G---Lqv~~~~g~W~~v~p~~g~~v 223 (316)
++|.+. .+.||++|||| ++.. ..+ ..|+++|||+|+||||+|| .++| |||++ +|+|++|+|++|++|
T Consensus 150 ~~f~~~----~~~lrl~~YPp-~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~-~g~W~~V~p~pg~lv 223 (311)
T 1dcs_A 150 EAFLDC----EPLLRFRYFPQ-VPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEV-GGAFTDLPYRPDAVL 223 (311)
T ss_dssp HHHHSC----CCEEEEEEECC------------CCEEEEEECSSEEEEEEECCTTCCCCEEEEE-TTEEEECCCCTTCEE
T ss_pred hHHhhc----chhhheecCCC-CCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEe-CCEEEeCcCCCCeEE
Confidence 777654 67899999954 4432 112 6789999999999999999 8999 99996 899999999999999
Q ss_pred EEcchhhHHHhCCcccCCCCeeecCC-----CCceEEEEEcccCCCCceEeCCcccccCCCCCCC--CCccHHHHHHHHH
Q 047054 224 VNIGDLMHAWCNGKLRSSEHRVVLKR-----CVNRLSLAFFWCFEDEKRIFAPDEVVGLGNLRRY--KPFVCADYLKFRE 296 (316)
Q Consensus 224 vn~Gd~l~~~TnG~~~s~~HRV~~~~-----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y--~~~~~~e~~~~~~ 296 (316)
||+||+||+||||+|||++|||+.++ ..+||||+||++|+.|++|. +++++++++|++| +++|++||+..++
T Consensus 224 VNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~ 302 (311)
T 1dcs_A 224 VFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNY 302 (311)
T ss_dssp EEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSC
T ss_pred EEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHH
Confidence 99999999999999999999999986 68999999999999999999 9999998899999 9999999999887
Q ss_pred hhcc
Q 047054 297 SSVE 300 (316)
Q Consensus 297 ~~~~ 300 (316)
++.+
T Consensus 303 ~~~~ 306 (311)
T 1dcs_A 303 VNIR 306 (311)
T ss_dssp CCEE
T ss_pred HHHh
Confidence 7655
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=6.1e-65 Score=458.57 Aligned_cols=266 Identities=22% Similarity=0.347 Sum_probs=214.2
Q ss_pred CCCceEeCCCCCChHHHHHHHHHHHhccEEEEEeCCCCHHHHHHHHHHHHhhcCCChhhhhccCCC-CCCCCcccCc-CC
Q 047054 8 VELPVLDISQPLSPSALSSLSRACEEWGFFYITNHGVSKHLYRRLHSLSNQLFDLPYESKLKVGPS-SSTKTYTPHF-IA 85 (316)
Q Consensus 8 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy~~~~-~~ 85 (316)
++||||||+.+ +++++|.+||+++|||||+|||||.++++++++.+++||++ |+|+++... ...+||.+.. .+
T Consensus 2 ~~IPvIDls~~---~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e 76 (280)
T 3on7_A 2 MKLETIDYRAA---DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISE 76 (280)
T ss_dssp --CCEEETTST---THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC---
T ss_pred CCCCEEECCCh---hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCcccc
Confidence 57999999975 46899999999999999999999999999999999999997 789888533 3578997654 21
Q ss_pred CCccccccccCCCcccccccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhh---hhhhhcCcc-
Q 047054 86 SPFFESIRVSGPEFFASAKATVDVLFDEPPSELSETLKEYGNKLTELSKTIVKIVLTSLGEHFQKKF---YESEFKNCH- 161 (316)
Q Consensus 86 ~~~~e~~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lg~~~~~~~---~~~~~~~~~- 161 (316)
.. . .....|..+.... ..||..+|+||+.+++|+++|.+|+.+|+++|+++||++..+.+ +.+.+..+.
T Consensus 77 ~~--~--~~~~~D~kE~~~~---~p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~ 149 (280)
T 3on7_A 77 TA--K--GHTVKDIKEYYHV---YPWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHK 149 (280)
T ss_dssp ---------CCCCSCEEEEE---CTTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSS
T ss_pred cc--C--CCCcccHHHHHhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCcc
Confidence 10 0 0011222221111 13677789999999999999999999999999999884322333 455565554
Q ss_pred ceeeecccCCCCCCCccccCcccccCCCCCeEEEEeCCCCceeEEccCCCeEEecCCCCeEEEEcchhhHHHhCCcccCC
Q 047054 162 GYLRIINYSPPEDVEKNEVEGLGMHTDMSCITIVYQDQIGGLQVRSKQGKWMNINPCEDTLIVNIGDLMHAWCNGKLRSS 241 (316)
Q Consensus 162 ~~lrl~~Y~p~~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~v~p~~g~~vvn~Gd~l~~~TnG~~~s~ 241 (316)
+.||++||||....+....+|+++|||+|+||||+||+++||||++++|+|++|+|.||++|||+||+||+||||+|||+
T Consensus 150 ~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~ 229 (280)
T 3on7_A 150 TLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPST 229 (280)
T ss_dssp CEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCC
T ss_pred ceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCC
Confidence 78999999543322223578999999999999999999999999988999999999999999999999999999999999
Q ss_pred CCeeecCC----CCceEEEEEcccCCCCceEeCCcccccCCCCCCCCCccHHHHHHHHHhhc
Q 047054 242 EHRVVLKR----CVNRLSLAFFWCFEDEKRIFAPDEVVGLGNLRRYKPFVCADYLKFRESSV 299 (316)
Q Consensus 242 ~HRV~~~~----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y~~~~~~e~~~~~~~~~ 299 (316)
+|||+.++ ..+|||++||++|+.|++|.| ++|++||++.|++..
T Consensus 230 ~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 230 SHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp CEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred CceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 99999873 468999999999999998863 689999999998754
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.14 E-value=0.058 Score=46.60 Aligned_cols=78 Identities=19% Similarity=0.203 Sum_probs=51.8
Q ss_pred eeeecccCCCCCCCccccCcccccCCCC-----------CeEEEEe--C--C-C-CceeEEccCCCeEEecCCCCeEEEE
Q 047054 163 YLRIINYSPPEDVEKNEVEGLGMHTDMS-----------CITIVYQ--D--Q-I-GGLQVRSKQGKWMNINPCEDTLIVN 225 (316)
Q Consensus 163 ~lrl~~Y~p~~~~~~~~~~~~~~HtD~~-----------~lTlL~q--d--~-~-~GLqv~~~~g~W~~v~p~~g~~vvn 225 (316)
-+++++|.+.. -..+|.|.. .+|+++. + . . |.|.+.+..+ =..|+|..|.+|+.
T Consensus 100 ~~~~~rY~~G~--------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~-~~~V~P~~G~~v~F 170 (243)
T 3dkq_A 100 PPLFNRYQGGE--------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG-QQSIKLSAGSLVLY 170 (243)
T ss_dssp EEEEEEECTTC--------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE-EEEECCCTTCEEEE
T ss_pred cceEEEECCCC--------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC-cEEEecCCCEEEEE
Confidence 48888995421 145676653 3555544 3 1 1 4466664433 36799999999987
Q ss_pred cchhhHHHhCCcccCCCCeeecCCCCceEEEEEccc
Q 047054 226 IGDLMHAWCNGKLRSSEHRVVLKRCVNRLSLAFFWC 261 (316)
Q Consensus 226 ~Gd~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~ 261 (316)
-. .++|+|..-....|++++.+++
T Consensus 171 ~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 171 PS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred CC------------CCeEcCccccccCEEEEEEehh
Confidence 53 3699998755579999998876
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=88.97 E-value=1.1 Score=38.59 Aligned_cols=81 Identities=22% Similarity=0.378 Sum_probs=53.6
Q ss_pred eeecccCCCCCCCccccCcccccCCCC-----CeEEEEe--C-C----CCc-eeEEccCC-CeEEecCCCCeEEEEcchh
Q 047054 164 LRIINYSPPEDVEKNEVEGLGMHTDMS-----CITIVYQ--D-Q----IGG-LQVRSKQG-KWMNINPCEDTLIVNIGDL 229 (316)
Q Consensus 164 lrl~~Y~p~~~~~~~~~~~~~~HtD~~-----~lTlL~q--d-~----~~G-Lqv~~~~g-~W~~v~p~~g~~vvn~Gd~ 229 (316)
+.+.+|+|.- .....|.|.. .+|+++. + . .+| |.+++.++ ....|.|..|.+|++-.+.
T Consensus 119 ~~~~~Y~~~G-------~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~ 191 (247)
T 2hbt_A 119 AMVACYPGNG-------TGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR 191 (247)
T ss_dssp EEEEEECSSS-------CCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST
T ss_pred EEEEEecCCC-------CcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC
Confidence 5666885311 1256777762 5777765 2 1 144 67874432 5689999999999887531
Q ss_pred hHHHhCCcccCCCCeeecCCCCceEEEEEcccC
Q 047054 230 MHAWCNGKLRSSEHRVVLKRCVNRLSLAFFWCF 262 (316)
Q Consensus 230 l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~p 262 (316)
-.+|.|... ...|+||+.+++-
T Consensus 192 ----------~~~H~V~p~-~~~R~sit~W~~~ 213 (247)
T 2hbt_A 192 ----------RNPHEVQPA-YATRYAITVWYFD 213 (247)
T ss_dssp ----------TCCEEECCB-SSCEEEEEEEEEE
T ss_pred ----------CceeeeccC-CCEEEEEEEEEcC
Confidence 168999874 5899999876653
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=88.22 E-value=2.2 Score=35.82 Aligned_cols=43 Identities=14% Similarity=0.274 Sum_probs=33.7
Q ss_pred CCeEEecCCCCeEEEEcchhhHHHhCCcccCCCCeeecCC-CCceEEEEEcccCCC
Q 047054 210 GKWMNINPCEDTLIVNIGDLMHAWCNGKLRSSEHRVVLKR-CVNRLSLAFFWCFED 264 (316)
Q Consensus 210 g~W~~v~p~~g~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~-~~~R~Si~~F~~p~~ 264 (316)
..+..|.|.+|.+||.-+. ..|.|.... .++|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3567899999999988763 479999865 479999999887753
No 10
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=85.98 E-value=3.1 Score=34.93 Aligned_cols=86 Identities=15% Similarity=0.020 Sum_probs=52.0
Q ss_pred eeeecccCCCCCCCccccCcccccCCCC-----------CeEEEEe--CC-CCceeEEccCCCeEEecCCCCeEEEEcch
Q 047054 163 YLRIINYSPPEDVEKNEVEGLGMHTDMS-----------CITIVYQ--DQ-IGGLQVRSKQGKWMNINPCEDTLIVNIGD 228 (316)
Q Consensus 163 ~lrl~~Y~p~~~~~~~~~~~~~~HtD~~-----------~lTlL~q--d~-~~GLqv~~~~g~W~~v~p~~g~~vvn~Gd 228 (316)
.+++++|.+.. ...+|.|.. .+|+++. |. .||=-+. ++. =+.|.|..|.+++.-.-
T Consensus 112 ~lqv~~Y~~G~--------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~F-p~~-~~~V~P~~G~al~f~~~ 181 (216)
T 3itq_A 112 GLHILNYEVDQ--------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFF-PKL-NLSVHPRKGMAVYFEYF 181 (216)
T ss_dssp CCEEEEECBTC--------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEE-TTT-TEEECCCTTCEEEEECC
T ss_pred ceeEEEeCCCC--------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEe-cCC-CCEEecCCCeEEEEecc
Confidence 48888995421 145677753 3677755 32 2342233 332 27899999998876531
Q ss_pred hhHHHhCCc-ccCCCCeeecCCCCceEEEEEcccC
Q 047054 229 LMHAWCNGK-LRSSEHRVVLKRCVNRLSLAFFWCF 262 (316)
Q Consensus 229 ~l~~~TnG~-~~s~~HRV~~~~~~~R~Si~~F~~p 262 (316)
. .+|. -..++|+|..-....|+++..+++-
T Consensus 182 ~----~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 182 Y----QDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp C----SSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred C----CCCCCCCccccccceeccccEEEEEeeEec
Confidence 0 1121 1468999987555789999887653
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=85.21 E-value=2 Score=36.05 Aligned_cols=48 Identities=10% Similarity=0.013 Sum_probs=34.2
Q ss_pred eEEecCCCCeEEEEcchhhHHHhCCcc-cCCCCeeecCCCCceEEEEEcccCC
Q 047054 212 WMNINPCEDTLIVNIGDLMHAWCNGKL-RSSEHRVVLKRCVNRLSLAFFWCFE 263 (316)
Q Consensus 212 W~~v~p~~g~~vvn~Gd~l~~~TnG~~-~s~~HRV~~~~~~~R~Si~~F~~p~ 263 (316)
-+.|.|..|.+|+.--- ..+|.. ..++|+|..-....|+++..+++-.
T Consensus 170 ~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYSL----KPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEESB----CTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEee----CCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 37899999998876430 123433 5789999875457899999887643
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=76.23 E-value=19 Score=30.51 Aligned_cols=44 Identities=25% Similarity=0.286 Sum_probs=32.8
Q ss_pred CCeEEecCCCCeEEEEcchhhHHHhCCcccCCCCeeecC--CCCceEEEEEccc
Q 047054 210 GKWMNINPCEDTLIVNIGDLMHAWCNGKLRSSEHRVVLK--RCVNRLSLAFFWC 261 (316)
Q Consensus 210 g~W~~v~p~~g~~vvn~Gd~l~~~TnG~~~s~~HRV~~~--~~~~R~Si~~F~~ 261 (316)
+..+.+...+|+++|+-|+.=..|. |.|... ....|+|+.|=..
T Consensus 184 ~~~~~i~L~~gsllvM~G~~r~~w~--------H~I~~~~~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 184 VERVKIPLDHGTLLIMEGATQADWQ--------HRVPKEYHSREPRVNLTFRTV 229 (238)
T ss_dssp CCEEEEEECTTCEEEEEETHHHHEE--------EEECCCSSCCCCEEEEEEECC
T ss_pred CceEEEEcCCCCEEEEChhhhCccE--------ecCCCcCCCCCCEEEEEeeec
Confidence 3688999999999999999765665 444322 2579999998653
No 13
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=69.15 E-value=4 Score=35.40 Aligned_cols=49 Identities=16% Similarity=0.388 Sum_probs=37.7
Q ss_pred CCCceEeCCCCCChHHHHHHHHHHHhccEEEEEeCCCCHHHHHHHHHHHHhh
Q 047054 8 VELPVLDISQPLSPSALSSLSRACEEWGFFYITNHGVSKHLYRRLHSLSNQL 59 (316)
Q Consensus 8 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f 59 (316)
++|+-||+++..+.+.+++|++++.++|++.+.+..++.+.+. +.++.|
T Consensus 16 aei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~~~~---~~~~~~ 64 (283)
T 1otj_A 16 AQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQR---ALAQRF 64 (283)
T ss_dssp EEEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHHHHH---HHHHTT
T ss_pred EEEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHH---HHHHHh
Confidence 3567788988667778999999999999999999888765443 344554
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=65.69 E-value=36 Score=27.97 Aligned_cols=41 Identities=15% Similarity=0.310 Sum_probs=31.2
Q ss_pred CeEEecCCCCeEEEEcchhhHHHhCCcccCCCCeeecCC--CCceEEEEEc
Q 047054 211 KWMNINPCEDTLIVNIGDLMHAWCNGKLRSSEHRVVLKR--CVNRLSLAFF 259 (316)
Q Consensus 211 ~W~~v~p~~g~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~--~~~R~Si~~F 259 (316)
....+...+|+++|+-|+.=..|. |.|-... ...|+|+.|-
T Consensus 158 ~~~~~~L~~GsllvM~g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 158 AVVRLPLAHGSLLMMNHPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp CCEEEEECTTEEEEEETTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred ceEEEECCCCCEEEECchhhheeE--------eeccccCCCCCCEEEEEee
Confidence 578899999999999998766665 5554432 3789999874
No 15
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=65.26 E-value=3.4 Score=34.42 Aligned_cols=36 Identities=31% Similarity=0.451 Sum_probs=31.7
Q ss_pred CCceEeCCCCCChHHHHHHHHHHHhccEEEEEeCCC
Q 047054 9 ELPVLDISQPLSPSALSSLSRACEEWGFFYITNHGV 44 (316)
Q Consensus 9 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi 44 (316)
.||++++..+...+.++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 699999988777788899999998888889999995
No 16
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=64.65 E-value=14 Score=33.24 Aligned_cols=82 Identities=17% Similarity=0.184 Sum_probs=53.5
Q ss_pred cccccCCCC------CeEEEEeCCCCceeEEccCCCeEEecCCCCeEEEEcchhhHHHhCCcccCCCCeee---------
Q 047054 182 GLGMHTDMS------CITIVYQDQIGGLQVRSKQGKWMNINPCEDTLIVNIGDLMHAWCNGKLRSSEHRVV--------- 246 (316)
Q Consensus 182 ~~~~HtD~~------~lTlL~qd~~~GLqv~~~~g~W~~v~p~~g~~vvn~Gd~l~~~TnG~~~s~~HRV~--------- 246 (316)
++++|.|-. ..|+-+.. ..-+.+..++|.+..+...+|+++|+-|+.=..|.-|.-+-...-+-
T Consensus 210 ~I~~H~D~~~~~~~~I~slSLG~-~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~~ 288 (345)
T 3tht_A 210 GIPAHIDTHSAFEDEIVSLSLGS-EIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGI 288 (345)
T ss_dssp CEEEECCCTTTBCSCEEEEEESS-CEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEEESGGGSSCEE
T ss_pred CEeeccCCchhcCCeEEEEECCC-ceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCCcccCCccCccccccccc
Confidence 688999884 33343322 23466665567899999999999999999888885544333222211
Q ss_pred ---------cCCCCceEEEEEcccCCC
Q 047054 247 ---------LKRCVNRLSLAFFWCFED 264 (316)
Q Consensus 247 ---------~~~~~~R~Si~~F~~p~~ 264 (316)
..+...|+|+.|=.-++.
T Consensus 289 ~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 289 ITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred ccccCCCceeccCCCEEEEEEEecCCC
Confidence 111357999998876654
No 17
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=63.84 E-value=6.1 Score=34.61 Aligned_cols=50 Identities=10% Similarity=0.218 Sum_probs=37.4
Q ss_pred CCceEeCCCCCChHHHHHHHHHHHhccEEEEEeCC-CCHHHHHHHHHHHHhhcC
Q 047054 9 ELPVLDISQPLSPSALSSLSRACEEWGFFYITNHG-VSKHLYRRLHSLSNQLFD 61 (316)
Q Consensus 9 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~fF~ 61 (316)
+|+-||+++..+.+.+++|++++.++|++.+.+.. ++.+ ...+.++.|=.
T Consensus 27 ei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~~---~~~~~~~~fG~ 77 (301)
T 1oih_A 27 EIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDDQ---SQEGFAKLLGE 77 (301)
T ss_dssp EEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHTTSC
T ss_pred EEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHHhCC
Confidence 45667888755677899999999999999999988 8854 44445555543
No 18
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=63.02 E-value=3.8 Score=37.57 Aligned_cols=50 Identities=16% Similarity=0.123 Sum_probs=38.9
Q ss_pred CCceEeCCCCC-ChHHHHHHHHHHHhccEEEEEeCCCCHHHHHHHHHHHHhhcC
Q 047054 9 ELPVLDISQPL-SPSALSSLSRACEEWGFFYITNHGVSKHLYRRLHSLSNQLFD 61 (316)
Q Consensus 9 ~iPvIDls~~~-~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 61 (316)
++|.||++++. +++.+.++.+|+.++|++.+.+..++.+.+. +.++.|=.
T Consensus 122 ~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~~~~---~~a~~~G~ 172 (388)
T 3o2g_A 122 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVS---KLGKRMGF 172 (388)
T ss_dssp CCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTTHHH---HHHHHHSC
T ss_pred CCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHHHHH---HHHHHhCC
Confidence 79999998764 5678899999999999999999988755433 34455543
No 19
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=58.54 E-value=7.2 Score=33.87 Aligned_cols=50 Identities=10% Similarity=0.234 Sum_probs=38.8
Q ss_pred CCCceEeCCCCCChHHHHHHHHHHHhccEEEEEeCCCCHHHHHHHHHHHHhhc
Q 047054 8 VELPVLDISQPLSPSALSSLSRACEEWGFFYITNHGVSKHLYRRLHSLSNQLF 60 (316)
Q Consensus 8 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 60 (316)
++|.=|||++..+++.+++|++|+.++|.+.+.+..++.+.+ .+.++.|=
T Consensus 14 aei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~~~---~~fa~~fG 63 (277)
T 3pvj_A 14 AQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPEQQ---ARFAARFG 63 (277)
T ss_dssp EEEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHHHH---HHHHGGGS
T ss_pred EEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHhC
Confidence 456668998865778899999999999999999998876543 34455553
No 20
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=58.16 E-value=5.3 Score=33.31 Aligned_cols=36 Identities=11% Similarity=0.125 Sum_probs=31.2
Q ss_pred CCceEeCCCCCChHHHHHHHHHHHhccEEEEEeCCC
Q 047054 9 ELPVLDISQPLSPSALSSLSRACEEWGFFYITNHGV 44 (316)
Q Consensus 9 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi 44 (316)
.||++++..+...+.++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 689999988777778889999998888889999995
No 21
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=57.76 E-value=5.8 Score=32.73 Aligned_cols=36 Identities=28% Similarity=0.356 Sum_probs=30.9
Q ss_pred CCceE-eCCCCCChHHHHHHHHHHHhccEEEEEeCCC
Q 047054 9 ELPVL-DISQPLSPSALSSLSRACEEWGFFYITNHGV 44 (316)
Q Consensus 9 ~iPvI-Dls~~~~~~~~~~l~~A~~~~Gff~l~nhgi 44 (316)
.||++ ++.....++.++.+.+++.+.-.+.|.|||+
T Consensus 117 ~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 68999 8877777788889999998888889999994
No 22
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=57.18 E-value=31 Score=28.63 Aligned_cols=69 Identities=16% Similarity=0.159 Sum_probs=44.6
Q ss_pred cccccCCC-----C--CeEEEEeCCCCceeEEc--cCCCeEEecCCCCeEEEEcchhhHHHhCCcccCCCCeeecCCC--
Q 047054 182 GLGMHTDM-----S--CITIVYQDQIGGLQVRS--KQGKWMNINPCEDTLIVNIGDLMHAWCNGKLRSSEHRVVLKRC-- 250 (316)
Q Consensus 182 ~~~~HtD~-----~--~lTlL~qd~~~GLqv~~--~~g~W~~v~p~~g~~vvn~Gd~l~~~TnG~~~s~~HRV~~~~~-- 250 (316)
++++|.|- + ++++-+... .-+.+.. +.+....+...+|+++|+-|+. ++ -.|.|.....
T Consensus 117 ~i~~H~D~~e~~~~~pI~svSLG~~-~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-------r~--~~H~I~~~~~~~ 186 (211)
T 3i3q_A 117 KLSLHQDKDEPDLRAPIVSVSLGLP-AIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-------RL--FYHGIQPLKAGF 186 (211)
T ss_dssp CEEEECCCCCSCTTSCEEEEEEESC-EEEEECCSSTTSCCEEEEECTTCEEEECGGG-------TT--CCEEECCCCCCC
T ss_pred CcccccCCCccccCCCEEEEECCCC-eEEEEecccCCCceEEEECCCCCEEEECchH-------Hc--eEeccCcccCCc
Confidence 68899993 2 334444322 2344442 2357889999999999998874 12 2588866532
Q ss_pred -----CceEEEEEcc
Q 047054 251 -----VNRLSLAFFW 260 (316)
Q Consensus 251 -----~~R~Si~~F~ 260 (316)
..|+|+.|-.
T Consensus 187 ~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 187 HPLTIDCRYNLTFRQ 201 (211)
T ss_dssp BTTTBTCEEEEEEEC
T ss_pred CCCCCCCEEEEEeee
Confidence 3699999864
No 23
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=56.00 E-value=6.7 Score=33.21 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=31.6
Q ss_pred CCCceEeCCCCCChHHHHHHHHHHHhccEEEEEeCCC
Q 047054 8 VELPVLDISQPLSPSALSSLSRACEEWGFFYITNHGV 44 (316)
Q Consensus 8 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi 44 (316)
..||++++......+.++.+.+++.+.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 3689999987777778889999998888889999995
No 24
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=55.48 E-value=11 Score=33.20 Aligned_cols=50 Identities=8% Similarity=0.122 Sum_probs=37.8
Q ss_pred CCCceEeCCCCCChHHHHHHHHHHHhccEEEEEeC-CCCHHHHHHHHHHHHhhc
Q 047054 8 VELPVLDISQPLSPSALSSLSRACEEWGFFYITNH-GVSKHLYRRLHSLSNQLF 60 (316)
Q Consensus 8 ~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~fF 60 (316)
++|+=|||+...+++.+++|++|+.++|.+.+.+. .++.+.. .+.++.|=
T Consensus 20 aei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~~~---~~fa~~fG 70 (301)
T 3r1j_A 20 ARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDSRQ---LEFARLLG 70 (301)
T ss_dssp EEEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHHHH---HHHHHHHS
T ss_pred ceEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHHHH---HHHHHhcC
Confidence 45666788865577889999999999999999998 7887543 34455553
No 25
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=51.11 E-value=4.2 Score=37.96 Aligned_cols=54 Identities=13% Similarity=0.109 Sum_probs=38.7
Q ss_pred CCCCceEeCCCCCChHHHHHHHHHHHhccEEEEEeCCCCHHHHHHHHHHHHhhcC
Q 047054 7 SVELPVLDISQPLSPSALSSLSRACEEWGFFYITNHGVSKHLYRRLHSLSNQLFD 61 (316)
Q Consensus 7 ~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 61 (316)
..-||.||++++.+...-+..++.+++.|++.|.|. ||.+......+...+|.+
T Consensus 98 ~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 356999999876433334666778889999876653 788877777777777653
No 26
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=49.42 E-value=7.3 Score=33.84 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=31.6
Q ss_pred CCceEeCCCCCChHHHHHHHHHHHhccEEEEEeCCC
Q 047054 9 ELPVLDISQPLSPSALSSLSRACEEWGFFYITNHGV 44 (316)
Q Consensus 9 ~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi 44 (316)
.||++++..+...+.++.+.+++.+.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 689999987777788899999999988899999995
No 27
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=40.83 E-value=14 Score=32.12 Aligned_cols=37 Identities=14% Similarity=0.096 Sum_probs=31.3
Q ss_pred CCCceEeCCCCC-ChHHHHHHHHHHHhccEEEEEeCCC
Q 047054 8 VELPVLDISQPL-SPSALSSLSRACEEWGFFYITNHGV 44 (316)
Q Consensus 8 ~~iPvIDls~~~-~~~~~~~l~~A~~~~Gff~l~nhgi 44 (316)
..||++|+..+. +.++.+.+.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 368999998765 6678889999999999999999995
No 28
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=38.48 E-value=22 Score=26.59 Aligned_cols=42 Identities=21% Similarity=0.267 Sum_probs=28.9
Q ss_pred eEeCCCCCChHHHHHHHHHHHhccEEEEEeCCCCHH-HHHHHH
Q 047054 12 VLDISQPLSPSALSSLSRACEEWGFFYITNHGVSKH-LYRRLH 53 (316)
Q Consensus 12 vIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~-~~~~~~ 53 (316)
|||++.+........|.+.|++.|+.-+--.|.+.+ ..+.+.
T Consensus 51 VlDl~~l~~~~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~ 93 (120)
T 3ghf_A 51 VINVSGLESPVNWPELHKIVTSTGLRIIGVSGCKDASLKVEID 93 (120)
T ss_dssp EEEEEECCSSCCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHH
T ss_pred EEEccccCChHHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHH
Confidence 568877643334788999999999988876665544 444333
No 29
>2ld7_A Histone deacetylase complex subunit SAP30; transcription; NMR {Mus musculus}
Probab=37.66 E-value=64 Score=23.05 Aligned_cols=57 Identities=19% Similarity=0.313 Sum_probs=37.7
Q ss_pred CCCCCCceEeCCCCCChHHHHHHHHHHHhccEEEEEeCCCCHHHHHHHHHHH-HhhcCCChhhhhcc
Q 047054 5 WTSVELPVLDISQPLSPSALSSLSRACEEWGFFYITNHGVSKHLYRRLHSLS-NQLFDLPYESKLKV 70 (316)
Q Consensus 5 ~~~~~iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~-~~fF~lp~e~K~~~ 70 (316)
+.....|-||++.+. ...|++-++.++. . +..+++.+ .+..++ +.|-++|..|+.-+
T Consensus 14 ~~~~~~p~vdf~kL~----~~tLrrY~r~y~L-~-~~~~~sK~---qLa~aV~kHF~s~~VdE~evI 71 (94)
T 2ld7_A 14 VQDIDTPEVDLYQLQ----VNTLRRYKRHFKL-P-TRPGLNKA---QLVEIVGCHFKSIPVNEKDTL 71 (94)
T ss_dssp SCSSCCCCCCCSSSC----HHHHHHHHHHTTC-C-CCSSCCHH---HHHHHHHHHHTTCCCCHHHHH
T ss_pred cccCCCCCcCHHHCC----HHHHHHHHHHhCC-C-CCCCCCHH---HHHHHHHHHHHcCCCCHHHHH
Confidence 355678999999984 6778888888876 2 44556654 333333 44556888777654
No 30
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=37.20 E-value=12 Score=30.83 Aligned_cols=36 Identities=17% Similarity=0.294 Sum_probs=27.7
Q ss_pred CCCceEeCCCCCChHHHHHHHHHHHhcc---EEEEEeCCC
Q 047054 8 VELPVLDISQPLSPSALSSLSRACEEWG---FFYITNHGV 44 (316)
Q Consensus 8 ~~iPvIDls~~~~~~~~~~l~~A~~~~G---ff~l~nhgi 44 (316)
..||++++. ...++.++.+.+++.+.+ .+.|.|||+
T Consensus 138 ~~vp~~~~~-~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE-QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC-SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC-CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 478998884 444567788889998865 788899995
No 31
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=34.93 E-value=23 Score=30.80 Aligned_cols=48 Identities=6% Similarity=-0.015 Sum_probs=33.4
Q ss_pred CceEeCCCCCChHHHHHHHHHHHhccEEEEEeCC-C-CHHHHHHHHHHHHhhc
Q 047054 10 LPVLDISQPLSPSALSSLSRACEEWGFFYITNHG-V-SKHLYRRLHSLSNQLF 60 (316)
Q Consensus 10 iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhg-i-~~~~~~~~~~~~~~fF 60 (316)
|.=||++...+++..+.|++++.++|++.+.+.. + +.+. ..+.++.|=
T Consensus 31 I~gvdl~~~l~~~~~~~L~~~l~~~gvv~fRgq~~l~~~~~---~~~~a~~fG 80 (293)
T 3eat_X 31 LEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAES---LTRYCHDFG 80 (293)
T ss_dssp EEESSTTCBGGGSCHHHHHHHHHHHSEEEECSCBCCSSHHH---HHHHHHHHS
T ss_pred EECCCCCcCcCHHHHHHHHHHHHHhCEEEECCCCCCCCHHH---HHHHHHHhC
Confidence 4446777544556789999999999999999986 5 5543 334445553
No 32
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=31.67 E-value=13 Score=31.87 Aligned_cols=43 Identities=9% Similarity=0.200 Sum_probs=31.2
Q ss_pred CceEeCCCCCChHHHHHHHHHHHhccEEEEEeCCCCHHHHHHHHHHHHhh
Q 047054 10 LPVLDISQPLSPSALSSLSRACEEWGFFYITNHGVSKHLYRRLHSLSNQL 59 (316)
Q Consensus 10 iPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f 59 (316)
|+-||++++ + +++|++++.++|++.+.+..++.+. ..+.++.|
T Consensus 19 i~g~dl~~~-~---~~~l~~~l~~~G~v~~rg~~~~~~~---~~~~~~~~ 61 (273)
T 1nx8_A 19 IDHRDFLEA-K---TETIKNLLMRQGFVVVKNLDIDSDT---FRDIYSAY 61 (273)
T ss_dssp ECHHHHHHS-C---HHHHHHHHHHHCEEEECSCCCCHHH---HHHHHHTT
T ss_pred EECCCcccC-C---HHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHh
Confidence 344677666 3 8899999999999999998887643 33444544
No 33
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=26.82 E-value=66 Score=17.77 Aligned_cols=17 Identities=41% Similarity=0.839 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhccEEE
Q 047054 22 SALSSLSRACEEWGFFY 38 (316)
Q Consensus 22 ~~~~~l~~A~~~~Gff~ 38 (316)
..++.|.-.|.+-||||
T Consensus 10 ~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHhccCcccc
Confidence 56788888899999998
No 34
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=26.02 E-value=92 Score=27.50 Aligned_cols=40 Identities=10% Similarity=0.056 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhccEEEEEeCCCC----HHHHHHHHHHHHhhcC
Q 047054 22 SALSSLSRACEEWGFFYITNHGVS----KHLYRRLHSLSNQLFD 61 (316)
Q Consensus 22 ~~~~~l~~A~~~~Gff~l~nhgi~----~~~~~~~~~~~~~fF~ 61 (316)
+..+++++.+..-||+.=.+|||+ .+-+..+++++++|++
T Consensus 305 ~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 305 KIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 345677888888888666779875 5778999999999975
No 35
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=24.07 E-value=37 Score=29.19 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=28.5
Q ss_pred CCceEeCCC---------CCChHHHHHHHHHHHhccEEEEEeCCC
Q 047054 9 ELPVLDISQ---------PLSPSALSSLSRACEEWGFFYITNHGV 44 (316)
Q Consensus 9 ~iPvIDls~---------~~~~~~~~~l~~A~~~~Gff~l~nhgi 44 (316)
.||++++.. ..+++..+.+.+++.+.-.+.|.|||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCce
Confidence 689998641 225678889999999888889999995
No 36
>2k6o_A Cathelicidin antimicrobial peptide; human HOST defense peptide, human cathelicidin, LL-37, bacterial membrane targeting, antibiotic; NMR {Homo sapiens} PDB: 2lmf_A
Probab=23.68 E-value=6 Score=22.94 Aligned_cols=14 Identities=36% Similarity=0.655 Sum_probs=11.1
Q ss_pred ccccccccccccCC
Q 047054 303 FEKVGFTVKDFAGN 316 (316)
Q Consensus 303 ~~~~~~~~~~~~~~ 316 (316)
+.++++++++|+|+
T Consensus 17 ~kkIgQkIKdFf~~ 30 (37)
T 2k6o_A 17 FKRIVQRIKDFLRN 30 (37)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 45789999999874
No 37
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=22.59 E-value=90 Score=26.77 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=21.2
Q ss_pred eEeCCCCCChHHHHHHHHHHHhccEEEEE-eCCCCHHHHHHHHHHHH
Q 047054 12 VLDISQPLSPSALSSLSRACEEWGFFYIT-NHGVSKHLYRRLHSLSN 57 (316)
Q Consensus 12 vIDls~~~~~~~~~~l~~A~~~~Gff~l~-nhgi~~~~~~~~~~~~~ 57 (316)
+||++. ++......+.|.+.|.=.|+ ..|.+++.++.+.++++
T Consensus 77 VIDfT~---p~a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~ 120 (272)
T 4f3y_A 77 LIDFTL---PEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGE 120 (272)
T ss_dssp EEECSC---HHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTT
T ss_pred EEEcCC---HHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhc
Confidence 556653 34444444555555554444 34555555555544443
No 38
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=22.45 E-value=25 Score=29.32 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=26.8
Q ss_pred CceEeCCCCCChHHHHHHHHHHHhc-cEEEEEeCCC
Q 047054 10 LPVLDISQPLSPSALSSLSRACEEW-GFFYITNHGV 44 (316)
Q Consensus 10 iPvIDls~~~~~~~~~~l~~A~~~~-Gff~l~nhgi 44 (316)
||++++..+.. +..+++.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 78888877655 6778899999854 6777899995
No 39
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=22.15 E-value=1.4e+02 Score=28.93 Aligned_cols=70 Identities=21% Similarity=0.165 Sum_probs=42.9
Q ss_pred ccccCCC-C--CeEEEEe----C--C---C-CceeEEccC-------CCeEEecCCCCeEEEEcchhhHHHhCCcccCCC
Q 047054 183 LGMHTDM-S--CITIVYQ----D--Q---I-GGLQVRSKQ-------GKWMNINPCEDTLIVNIGDLMHAWCNGKLRSSE 242 (316)
Q Consensus 183 ~~~HtD~-~--~lTlL~q----d--~---~-~GLqv~~~~-------g~W~~v~p~~g~~vvn~Gd~l~~~TnG~~~s~~ 242 (316)
+..|.|. + .+|+++. | + . |-|++++.+ .....|.|..|.+|++.-. -+ ..+
T Consensus 137 L~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vs------p~---~S~ 207 (633)
T 3kt7_A 137 LLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVL------PG---FSF 207 (633)
T ss_dssp EEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEEECC------TT---TCC
T ss_pred eeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEEEcC------CC---CCc
Confidence 5778885 2 3555543 1 1 2 338887543 2467899999999987531 01 256
Q ss_pred CeeecC-CCCceEEEEEccc
Q 047054 243 HRVVLK-RCVNRLSLAFFWC 261 (316)
Q Consensus 243 HRV~~~-~~~~R~Si~~F~~ 261 (316)
|.|... ....|+||+-.++
T Consensus 208 H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 208 HDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp EEECCBCSSCCEEEEEEEEE
T ss_pred CCCCccCCCCCEEEEEEEec
Confidence 766321 1689999975544
No 40
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=21.92 E-value=97 Score=26.90 Aligned_cols=43 Identities=23% Similarity=0.303 Sum_probs=21.4
Q ss_pred eEeCCCCCChHHHHHHHHHHHhccEEEEEe-CCCCHHHHHHHHHHHH
Q 047054 12 VLDISQPLSPSALSSLSRACEEWGFFYITN-HGVSKHLYRRLHSLSN 57 (316)
Q Consensus 12 vIDls~~~~~~~~~~l~~A~~~~Gff~l~n-hgi~~~~~~~~~~~~~ 57 (316)
+||++. ++......+.|.+.|.=.|+. .|.+++..+.+.++++
T Consensus 92 vIDFT~---p~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~ 135 (288)
T 3ijp_A 92 ILDFSQ---PQASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAK 135 (288)
T ss_dssp EEECSC---HHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHHT
T ss_pred EEEcCC---HHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhC
Confidence 556653 334444445555555555443 4555554455444443
No 41
>2fcg_F Cationic, antibacterial protein FALL-39, core peptide; HOST defense peptide, antimicrobial peptide, antimicrobial protein; NMR {Synthetic}
Probab=21.51 E-value=5.1 Score=21.36 Aligned_cols=13 Identities=31% Similarity=0.526 Sum_probs=9.6
Q ss_pred cccccccccccCC
Q 047054 304 EKVGFTVKDFAGN 316 (316)
Q Consensus 304 ~~~~~~~~~~~~~ 316 (316)
.++++++++|+|+
T Consensus 6 kkIgQkIkdFf~~ 18 (26)
T 2fcg_F 6 KRIVQRIKDFLRN 18 (26)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 4568888888764
No 42
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.07 E-value=55 Score=22.10 Aligned_cols=41 Identities=17% Similarity=0.231 Sum_probs=32.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhhhhhc
Q 047054 116 SELSETLKEYGNKLTELSKTIVKIVLTSLGEHFQKKFYESEFK 158 (316)
Q Consensus 116 ~~f~~~~~~y~~~~~~l~~~ll~~la~~Lg~~~~~~~~~~~~~ 158 (316)
.+.+..+++|+..-.+-...-+..||..+| ++.+.....|.
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lg--L~~~VVrVWFq 54 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVG--LPQEFVKEWFE 54 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHT--CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhC--CCHHHHHHHHh
Confidence 456889999999888888888899999999 55676666553
Done!