Your job contains 1 sequence.
>047062
ADIDSTKQEILFSLPTSREKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDA
IDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKN
DPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSE
LKNQGSRVIILFQILIIRAKVCENEILGYCISLGPGVSPEVVVSPTIVRCIILALCYFWG
WHIPKGIDSVHDQ
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047062
(253 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2205205 - symbol:MOM "MORPHEUS MOLECULE" speci... 287 2.3e-24 2
ZFIN|ZDB-GENE-021125-1 - symbol:smarca5 "SWI/SNF related,... 133 7.2e-06 1
UNIPROTKB|F1P5V4 - symbol:HELLS "Uncharacterized protein"... 128 2.2e-05 1
RGD|1311921 - symbol:Chd7 "chromodomain helicase DNA bind... 132 3.1e-05 1
UNIPROTKB|E1BS47 - symbol:CHD7 "Chromodomain-helicase-DNA... 128 3.8e-05 1
UNIPROTKB|H0YJG4 - symbol:CHD8 "Chromodomain-helicase-DNA... 126 3.9e-05 1
MGI|MGI:2444748 - symbol:Chd7 "chromodomain helicase DNA ... 131 4.1e-05 1
UNIPROTKB|Q9P2D1 - symbol:CHD7 "Chromodomain-helicase-DNA... 131 4.1e-05 1
RGD|2323132 - symbol:LOC100359912 "SWI/SNF-related matrix... 125 4.3e-05 1
ZFIN|ZDB-GENE-030131-9923 - symbol:hells "helicase, lymph... 125 5.0e-05 1
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 125 5.3e-05 1
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 128 5.9e-05 1
UNIPROTKB|E2RTI2 - symbol:CHD3 "Uncharacterized protein" ... 128 5.9e-05 1
UNIPROTKB|F1ST12 - symbol:CHD3 "Uncharacterized protein" ... 128 6.0e-05 1
UNIPROTKB|Q9NRZ9 - symbol:HELLS "Lymphoid-specific helica... 124 6.3e-05 1
MGI|MGI:1935129 - symbol:Smarca5 "SWI/SNF related, matrix... 125 6.4e-05 1
RGD|1308832 - symbol:Smarca5 "SWI/SNF related, matrix ass... 125 6.4e-05 1
UNIPROTKB|F1N052 - symbol:SMARCA5 "Uncharacterized protei... 125 6.4e-05 1
UNIPROTKB|E2QWV0 - symbol:SMARCA5 "Uncharacterized protei... 125 6.4e-05 1
UNIPROTKB|O60264 - symbol:SMARCA5 "SWI/SNF-related matrix... 125 6.4e-05 1
UNIPROTKB|F1RRG9 - symbol:SMARCA5 "Uncharacterized protei... 125 6.4e-05 1
UNIPROTKB|F1NSG3 - symbol:CHD7 "Chromodomain-helicase-DNA... 128 6.8e-05 1
UNIPROTKB|E1BCV0 - symbol:HELLS "Uncharacterized protein"... 123 8.1e-05 1
MGI|MGI:106209 - symbol:Hells "helicase, lymphoid specifi... 123 8.2e-05 1
UNIPROTKB|E1C0M8 - symbol:SMARCA5 "Uncharacterized protei... 124 8.2e-05 1
UNIPROTKB|E1BPM4 - symbol:CHD7 "Uncharacterized protein" ... 128 9.0e-05 1
UNIPROTKB|F1RT88 - symbol:CHD7 "Uncharacterized protein" ... 128 9.2e-05 1
UNIPROTKB|F1PWD8 - symbol:CHD7 "Uncharacterized protein" ... 128 9.2e-05 1
UNIPROTKB|Q06A37 - symbol:CHD7 "Chromodomain-helicase-DNA... 128 9.3e-05 1
UNIPROTKB|I3LTT5 - symbol:SMARCA1 "Uncharacterized protei... 122 9.9e-05 1
RGD|620696 - symbol:Chd8 "chromodomain helicase DNA bindi... 127 0.00010 1
MGI|MGI:1915022 - symbol:Chd8 "chromodomain helicase DNA ... 127 0.00010 1
UNIPROTKB|E2QW28 - symbol:HELLS "Uncharacterized protein"... 122 0.00011 1
UNIPROTKB|K7EMY3 - symbol:CHD5 "Chromodomain-helicase-DNA... 123 0.00011 1
UNIPROTKB|E2QUR1 - symbol:CHD8 "Uncharacterized protein" ... 126 0.00011 1
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ... 123 0.00013 1
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA... 123 0.00013 1
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 125 0.00013 1
UNIPROTKB|Q9HCK8 - symbol:CHD8 "Chromodomain-helicase-DNA... 126 0.00014 1
UNIPROTKB|F6TQG2 - symbol:SMARCA1 "Probable global transc... 122 0.00014 1
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 125 0.00014 1
UNIPROTKB|F1SC64 - symbol:HELLS "Uncharacterized protein"... 121 0.00014 1
UNIPROTKB|P28370 - symbol:SMARCA1 "Probable global transc... 122 0.00014 1
UNIPROTKB|K7GMM0 - symbol:SMARCA1 "Uncharacterized protei... 122 0.00014 1
UNIPROTKB|K7GNV1 - symbol:SMARCA1 "Uncharacterized protei... 122 0.00014 1
UNIPROTKB|F1RTI9 - symbol:SMARCA1 "Uncharacterized protei... 122 0.00015 1
UNIPROTKB|K7GLQ2 - symbol:SMARCA1 "Uncharacterized protei... 122 0.00015 1
UNIPROTKB|F1N166 - symbol:SMARCA1 "Uncharacterized protei... 122 0.00015 1
UNIPROTKB|Q9NW36 - symbol:HELLS "cDNA FLJ10339 fis, clone... 115 0.00016 1
ZFIN|ZDB-GENE-040426-892 - symbol:chd1l "chromodomain hel... 121 0.00018 1
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ... 123 0.00019 1
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ... 123 0.00019 1
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 123 0.00021 1
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 123 0.00021 1
RGD|1311923 - symbol:Chd3 "chromodomain helicase DNA bind... 123 0.00022 1
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 123 0.00022 1
UNIPROTKB|F1LPP7 - symbol:Chd3 "Protein Chd3" species:101... 123 0.00023 1
UNIPROTKB|F1M7Q0 - symbol:Chd3 "Protein Chd3" species:101... 123 0.00024 1
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 122 0.00029 1
UNIPROTKB|E2QVR5 - symbol:SMARCA1 "Uncharacterized protei... 119 0.00033 1
UNIPROTKB|E1C1A9 - symbol:CHD2 "Uncharacterized protein" ... 121 0.00033 1
MGI|MGI:1915308 - symbol:Chd1l "chromodomain helicase DNA... 118 0.00035 1
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 121 0.00036 1
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 121 0.00037 1
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 121 0.00037 1
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 121 0.00037 1
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 121 0.00037 1
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 121 0.00037 1
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 121 0.00037 1
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 121 0.00037 1
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 121 0.00037 1
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 121 0.00037 1
ASPGD|ASPL0000052010 - symbol:AN1255 species:162425 "Emer... 120 0.00037 1
UNIPROTKB|F1MFS2 - symbol:CHD1L "Chromodomain-helicase-DN... 117 0.00045 1
UNIPROTKB|Q3B7N1 - symbol:CHD1L "Chromodomain-helicase-DN... 117 0.00045 1
RGD|1311935 - symbol:Chd1l "chromodomain helicase DNA bin... 117 0.00045 1
RGD|1309820 - symbol:Hells "helicase, lymphoid specific" ... 114 0.00045 1
UNIPROTKB|F1SDB8 - symbol:CHD1L "Uncharacterized protein"... 117 0.00046 1
ASPGD|ASPL0000048785 - symbol:AN1956 species:162425 "Emer... 119 0.00046 1
RGD|1561046 - symbol:Smarca1 "SWI/SNF related, matrix ass... 117 0.00053 1
UNIPROTKB|F1MLB2 - symbol:CHD8 "Uncharacterized protein" ... 120 0.00066 1
UNIPROTKB|I3LDG1 - symbol:LOC100738357 "Uncharacterized p... 110 0.00066 1
UNIPROTKB|F1S8J5 - symbol:CHD8 "Uncharacterized protein" ... 120 0.00066 1
UNIPROTKB|E2QUS7 - symbol:CHD8 "Uncharacterized protein" ... 120 0.00067 1
MGI|MGI:1935127 - symbol:Smarca1 "SWI/SNF related, matrix... 116 0.00070 1
UNIPROTKB|H3BTW3 - symbol:CHD9 "Chromodomain-helicase-DNA... 116 0.00074 1
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 118 0.00076 1
RGD|1306794 - symbol:Chd1 "chromodomain helicase DNA bind... 115 0.00078 1
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 118 0.00083 1
>TAIR|locus:2205205 [details] [associations]
symbol:MOM "MORPHEUS MOLECULE" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006342
"chromatin silencing" evidence=IMP] [GO:0032259 "methylation"
evidence=IMP] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] PROSITE:PS51085 PROSITE:PS51194 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006351 GO:GO:0004386 GO:GO:0051537 GO:GO:0031047
eggNOG:COG0553 EMBL:AC026875 GO:GO:0006344 EMBL:AF213627
EMBL:AF213628 EMBL:AK117959 EMBL:BT006219 IPI:IPI00523557
PIR:D86215 RefSeq:NP_563806.1 RefSeq:NP_849608.1 UniGene:At.20225
PDB:3VEM PDBsum:3VEM ProteinModelPortal:Q9M658 SMR:Q9M658
IntAct:Q9M658 STRING:Q9M658 PaxDb:Q9M658 PRIDE:Q9M658
EnsemblPlants:AT1G08060.1 EnsemblPlants:AT1G08060.2 GeneID:837322
KEGG:ath:AT1G08060 TAIR:At1g08060 HOGENOM:HOG000153248
InParanoid:Q9M658 OMA:SENLETQ PhylomeDB:Q9M658
ProtClustDB:CLSN2719681 Genevestigator:Q9M658 Uniprot:Q9M658
Length = 2001
Score = 287 (106.1 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 80 KLDSSRFVEYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDH 139
K SS + EYW+PVQ+S+VQLEQYC T D +G L + L S RK CDH
Sbjct: 471 KFYSSVYPEYWVPVQLSDVQLEQYCQTLFSKSLSLSSLSKID-LGALEETLNSVRKTCDH 529
Query: 140 PYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
PY++D SL+ LL K+LEL E LDV +KASGKL LLD ML+ +K G + ++ +Q
Sbjct: 530 PYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQ 583
Score = 38 (18.4 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 49 DVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSS 84
D+ ++ D + ++ D + + S + GKL S
Sbjct: 112 DIEQRKDSVEESTDKIKPIMSARSYRALFRGKLKES 147
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 133 (51.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 44/127 (34%), Positives = 59/127 (46%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y D + +L+ +L+ RKCC+HPYL D +
Sbjct: 392 EIKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLN-VLMQLRKCCNHPYLFDGAE 450
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
DL L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 451 PGPPYTTDLHL-------VVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCM 503
Query: 204 NEILGYC 210
GYC
Sbjct: 504 WRNYGYC 510
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ L + ++ E L VK SGK LLD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPLDPA-TQQFKVDEDL---VKNSGKFLLLDRMLPELKKRG 615
Query: 186 SRVIILFQILII 197
+V++ Q+ ++
Sbjct: 616 HKVLMFSQMTMM 627
>RGD|1311921 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
[GO:0021545 "cranial nerve development" evidence=IEA;ISO]
[GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
"female genitalia development" evidence=IEA;ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
development" evidence=ISO] [GO:0048844 "artery morphogenesis"
evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
[GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
"retina development in camera-type eye" evidence=IEA;ISO]
[GO:0060123 "regulation of growth hormone secretion"
evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
[GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
Length = 2985
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 34/111 (30%), Positives = 58/111 (52%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y V L + ++ RKCC+HPYL++ + + +
Sbjct: 1195 IEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKI 1254
Query: 151 L--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L KD A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1255 LEEFKDAHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1305
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y V L + ++ RKCC+HPYL++ + + +
Sbjct: 392 IEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKI 451
Query: 151 L--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 452 LEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 502
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 126 (49.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 30/111 (27%), Positives = 58/111 (52%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y + + L + ++ RKCC+HPYL++ + + +
Sbjct: 275 IEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKI 334
Query: 151 LVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 335 LTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 385
>MGI|MGI:2444748 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
[GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=ISO] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
development" evidence=ISO] [GO:0030217 "T cell differentiation"
evidence=ISO] [GO:0030540 "female genitalia development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
[GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
[GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
Genevestigator:A2AJK6 Uniprot:A2AJK6
Length = 2986
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 34/111 (30%), Positives = 58/111 (52%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y V L + ++ RKCC+HPYL++ + + +
Sbjct: 1196 IEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKI 1255
Query: 151 L--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1256 LEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1306
>UNIPROTKB|Q9P2D1 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IEA] [GO:0030540 "female genitalia development"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
development" evidence=IMP] [GO:0060021 "palate development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0021545
"cranial nerve development" evidence=IMP] [GO:0060123 "regulation
of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=TAS] [GO:0030217 "T cell differentiation"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
Ensembl:ENST00000307121 Ensembl:ENST00000423902
Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
Length = 2997
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 34/111 (30%), Positives = 58/111 (52%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y V L + ++ RKCC+HPYL++ + + +
Sbjct: 1206 IEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKI 1265
Query: 151 L--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1266 LEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>RGD|2323132 [details] [associations]
symbol:LOC100359912 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a5-like" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
Length = 760
Score = 125 (49.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 130 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 188
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
D+ L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 189 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCM 241
Query: 204 NEILGYC 210
YC
Sbjct: 242 WRNYEYC 248
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 125 (49.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +IL+ ++CC+H YL++ L D ++ E L V+ASGK +LD ML ELK +G
Sbjct: 576 LQNILMLLKRCCNHAYLIEYPLDPT-TGDFKIDEQL---VEASGKFLILDRMLPELKKRG 631
Query: 186 SRVIILFQILII 197
+V+I Q+ I
Sbjct: 632 HKVLIFSQMTSI 643
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 125 (49.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S++Q + Y +L+ I++ RKCC+HPYL +
Sbjct: 507 EFIVRVELSSMQKKFYKHILTKNFKALNQKGGGRVCSLLN-IMMDLRKCCNHPYLFPSAA 565
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + L E + KASGKL LL ML +LK RV++ Q+
Sbjct: 566 EEATISPSGLYEMSSL-TKASGKLDLLSKMLKQLKADNHRVLLFSQM 611
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 128 (50.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 43/160 (26%), Positives = 74/160 (46%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 930 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 985
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + ++ L
Sbjct: 986 PMQKKYYKYILTRNFEALNSRGGGNQVSLLN-IMMDLKKCCNHPYLFP--VAAMESPKLP 1042
Query: 157 LAEYLDVG--VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y + G +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1043 SGAY-EGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1081
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 128 (50.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 43/160 (26%), Positives = 74/160 (46%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 932 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 987
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + ++ L
Sbjct: 988 PMQKKYYKYILTRNFEALNSRGGGNQVSLLN-IMMDLKKCCNHPYLFP--VAAMESPKLP 1044
Query: 157 LAEYLDVG--VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y + G +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1045 SGAY-EGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1083
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 128 (50.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 43/160 (26%), Positives = 74/160 (46%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 934 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 989
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + ++ L
Sbjct: 990 PMQKKYYKYILTRNFEALNSRGGGNQVSLLN-IMMDLKKCCNHPYLFP--VAAMESPKLP 1046
Query: 157 LAEYLDVG--VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y + G +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1047 SGAY-EGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 124 (48.7 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 26/69 (37%), Positives = 44/69 (63%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDPV-TQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 615
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 616 HKVLLFSQM 624
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 408 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 466
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
D+ L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 467 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCM 519
Query: 204 NEILGYC 210
YC
Sbjct: 520 WRNYEYC 526
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 408 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 466
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
D+ L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 467 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCM 519
Query: 204 NEILGYC 210
YC
Sbjct: 520 WRNYEYC 526
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
D+ L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCM 520
Query: 204 NEILGYC 210
YC
Sbjct: 521 WRNYEYC 527
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
D+ L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCM 520
Query: 204 NEILGYC 210
YC
Sbjct: 521 WRNYEYC 527
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
D+ L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCM 520
Query: 204 NEILGYC 210
YC
Sbjct: 521 WRNYEYC 527
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
D+ L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCM 520
Query: 204 NEILGYC 210
YC
Sbjct: 521 WRNYEYC 527
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 128 (50.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y V L + ++ RKCC+HPYL++ + + +
Sbjct: 444 IEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKI 503
Query: 151 L--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 504 LEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 554
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 123 (48.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 26/69 (37%), Positives = 44/69 (63%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 538 LQNIMMLLRKCCNHPYLIEYPIDPV-TQEFKVDEEL---VTNSGKFLILDRMLPELKTRG 593
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 594 HKVLLFSQM 602
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 123 (48.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 25/69 (36%), Positives = 44/69 (63%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPY+++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 543 LRNIMMLLRKCCNHPYMIEYPIDPV-TQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 598
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 599 HKVLVFSQM 607
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 124 (48.7 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 394 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLN-ILMQLRKCCNHPYLFDGAE 452
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
D+ L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 453 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCM 505
Query: 204 NEILGYC 210
YC
Sbjct: 506 WRNYEYC 512
>UNIPROTKB|E1BPM4 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
Length = 2940
Score = 128 (50.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y V L + ++ RKCC+HPYL++ + + +
Sbjct: 1156 IEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKI 1215
Query: 151 L--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1216 LEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1266
>UNIPROTKB|F1RT88 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
Length = 2991
Score = 128 (50.1 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y V L + ++ RKCC+HPYL++ + + +
Sbjct: 1199 IEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKI 1258
Query: 151 L--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1259 LEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1309
>UNIPROTKB|F1PWD8 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
Length = 2994
Score = 128 (50.1 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y V L + ++ RKCC+HPYL++ + + +
Sbjct: 1205 IEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKI 1264
Query: 151 L--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1265 LEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1315
>UNIPROTKB|Q06A37 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
NextBio:20823957 Uniprot:Q06A37
Length = 3011
Score = 128 (50.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y V L + ++ RKCC+HPYL++ + + +
Sbjct: 1207 IEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKI 1266
Query: 151 L--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1267 LEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1317
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 122 (48.0 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 36/107 (33%), Positives = 54/107 (50%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 30/111 (27%), Positives = 59/111 (53%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y + + L + ++ RKCC+HPYL++ + + +
Sbjct: 1049 IEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKI 1108
Query: 151 LVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L++ E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1109 LMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 30/111 (27%), Positives = 59/111 (53%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y + + L + ++ RKCC+HPYL++ + + +
Sbjct: 1051 IEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKI 1110
Query: 151 LVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L++ E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1111 LMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1161
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 26/69 (37%), Positives = 44/69 (63%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 561 LQNIMMLLRKCCNHPYLIEYPIDPV-TQEFKIDEEL---VTNSGKFLILDRMLPELKARG 616
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 617 HKVLLFSQM 625
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 281 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 336
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + V L
Sbjct: 337 QMQKKYYKFILTRNFEALNSKGGGNQVSLLN-IMMDLKKCCNHPYLFPVAAVEAPV--LP 393
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 394 NGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 432
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 30/111 (27%), Positives = 58/111 (52%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y + + L + ++ RKCC+HPYL++ + + +
Sbjct: 666 IEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKI 725
Query: 151 LVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 726 LTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 776
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 872 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 927
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + V L
Sbjct: 928 QMQKKYYKFILTRNFEALNSKGGGNQVSLLN-IMMDLKKCCNHPYLFPVAAVEAPV--LP 984
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 985 NGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1023
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 898 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 953
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + V L
Sbjct: 954 QMQKKYYKFILTRNFEALNSKGGGNQVSLLN-IMMDLKKCCNHPYLFPVAAVEAPV--LP 1010
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1011 NGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1049
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 934 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 989
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + ++ L
Sbjct: 990 PMQKKYYKYILTRNFEALNSRGGGNQVSLLN-IMMDLKKCCNHPYLFP--VAAMESPKLP 1046
Query: 157 LAEYLDVG--VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y + G +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1047 SGAY-EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 30/111 (27%), Positives = 58/111 (52%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y + + L + ++ RKCC+HPYL++ + + +
Sbjct: 1049 IEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKI 1108
Query: 151 LVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1109 LTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 36/107 (33%), Positives = 54/107 (50%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 391 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 449
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 450 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 490
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 993 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 1048
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + ++ L
Sbjct: 1049 PMQKKYYKYILTRNFEALNSRGGGNQVSLLN-IMMDLKKCCNHPYLFP--VAAMESPKLP 1105
Query: 157 LAEYLDVG--VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y + G +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1106 SGAY-EGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1144
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 26/69 (37%), Positives = 44/69 (63%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDPV-TQEFKIDEEL---VTNSGKFLILDRMLPELKIRG 615
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 616 HKVLLFSQM 624
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 36/107 (33%), Positives = 54/107 (50%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 412 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 36/107 (33%), Positives = 54/107 (50%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 36/107 (33%), Positives = 54/107 (50%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 36/107 (33%), Positives = 54/107 (50%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 36/107 (33%), Positives = 54/107 (50%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 36/107 (33%), Positives = 54/107 (50%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>UNIPROTKB|Q9NW36 [details] [associations]
symbol:HELLS "cDNA FLJ10339 fis, clone NT2RM2000740, weakly
similar to POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 EMBL:AL138759 UniGene:Hs.655830
HGNC:HGNC:4861 ChiTaRS:HELLS EMBL:AK001201 IPI:IPI00012073
SMR:Q9NW36 STRING:Q9NW36 Ensembl:ENST00000371327
HOGENOM:HOG000198825 HOVERGEN:HBG072129 Uniprot:Q9NW36
Length = 310
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 134 RKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G +V++ Q
Sbjct: 5 RKCCNHPYLIEYPIDPV-TQEFKIDEEL---VTNSGKFLILDRMLPELKKRGHKVLLFSQ 60
Query: 194 I 194
+
Sbjct: 61 M 61
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++L+ RKC DHPYL D + + E+ E+L V+ASGKL LLD+ML+ L+ G
Sbjct: 300 LLNVLMQLRKCVDHPYLFD----GVEPEPFEMGEHL---VEASGKLSLLDSMLAYLQEGG 352
Query: 186 SRVIILFQI 194
V++ Q+
Sbjct: 353 HHVLLFSQM 361
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 814 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 869
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + V L
Sbjct: 870 QMQKKYYKFILTRNFEALNSKGGGNQVSLLN-IMMDLKKCCNHPYLFPVAAVEAPV--LP 926
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 927 NGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 965
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 830 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 885
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + V L
Sbjct: 886 QMQKKYYKFILTRNFEALNSKGGGNQVSLLN-IMMDLKKCCNHPYLFPVAAVEAPV--LP 942
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 943 NGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 981
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 761 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 816
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + V L
Sbjct: 817 QMQKKYYKFILTRNFEALNSKGGGNQVSLLN-IMMDLKKCCNHPYLFPVAAVEAPV--LP 873
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 874 NGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 912
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 844 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 899
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + V L
Sbjct: 900 QMQKKYYKFILTRNFEALNSKGGGNQVSLLN-IMMDLKKCCNHPYLFPVAAVEAPV--LP 956
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 957 NGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 995
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 890 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 945
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + ++ L
Sbjct: 946 PMQKKYYKYILTRNFEALNSRGGGNQVSLLN-IMMDLKKCCNHPYLFP--VAAMESPKLP 1002
Query: 157 LAEYLDVG--VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y + G +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1003 SGAY-EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQM 1041
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 898 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 953
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + V L
Sbjct: 954 QMQKKYYKFILTRNFEALNSKGGGNQVSLLN-IMMDLKKCCNHPYLFPVAAVEAPV--LP 1010
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1011 NGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1049
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 985 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 1040
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + ++ L
Sbjct: 1041 PMQKKYYKYILTRNFEALNSRGGGNQVSLLN-IMMDLKKCCNHPYLFP--VAAMESPKLP 1097
Query: 157 LAEYLDVG--VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y + G +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1098 SGAY-EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQM 1136
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 985 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 1040
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + ++ L
Sbjct: 1041 PMQKKYYKYILTRNFEALNSRGGGNQVSLLN-IMMDLKKCCNHPYLFP--VAAMESPKLP 1097
Query: 157 LAEYLDVG--VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y + G +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1098 SGAY-EGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQM 1136
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 122 (48.0 bits), Expect = 0.00029, P = 0.00029
Identities = 40/159 (25%), Positives = 73/159 (45%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 896 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 951
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + ++ L
Sbjct: 952 QMQKKYYKFILTRNFEALNSKGGGNQVSLLN-IMMDLKKCCNHPYLFP--VAAVEAPMLP 1008
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1009 NGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1047
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +IL+ RKCC+HPYL D + E++ V SGK+ +LD +L++LK QG
Sbjct: 462 LLNILMQLRKCCNHPYLFDGAEPG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQG 515
Query: 186 SRVIILFQI 194
SRV+I Q+
Sbjct: 516 SRVLIFSQM 524
>UNIPROTKB|E1C1A9 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
Uniprot:E1C1A9
Length = 1727
Score = 121 (47.7 bits), Expect = 0.00033, P = 0.00033
Identities = 31/109 (28%), Positives = 58/109 (53%)
Query: 87 VEYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y G L+ I++ +KCC+H YL+
Sbjct: 715 VEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLN-IVMELKKCCNHCYLIKPP 773
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ +E + L +++SGKL LLD +L+ L+++G+RV+I Q++
Sbjct: 774 EENERENGIETLQSL---IRSSGKLILLDKLLTRLRDRGNRVLIFSQMV 819
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +IL RKC DHPYL D + + E+ E+L ++ASGKL LLD +L+ L + G
Sbjct: 305 LQNILTQLRKCVDHPYLFD----GVEPEPFEVGEHL---IEASGKLHLLDRLLAFLYSGG 357
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 358 HRVLLFSQM 366
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 121 (47.7 bits), Expect = 0.00036, P = 0.00036
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
+HN+ E D+ K+D + D LG + K + + + + V++S
Sbjct: 894 FHNLEGFLEEFADI-AKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELI---VRVELS 949
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ +++ +KCC+HPYL + ++ +
Sbjct: 950 PMQKKYYKYILTRNFEALNARGGGNQVSLLN-VVMDLKKCCNHPYLFP--VAAMEAPKMP 1006
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y ++ASGKL LL ML LK G RV+I Q+
Sbjct: 1007 NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1045
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
+HN+ E D+ K+D + D LG + K + + + + V++S
Sbjct: 917 FHNLEGFLEEFADI-AKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELI---VRVELS 972
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ +++ +KCC+HPYL + ++ +
Sbjct: 973 PMQKKYYKYILTRNFEALNARGGGNQVSLLN-VVMDLKKCCNHPYLFP--VAAMEAPKMP 1029
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y ++ASGKL LL ML LK G RV+I Q+
Sbjct: 1030 NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1068
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
+HN+ E D+ K+D + D LG + K + + + + V++S
Sbjct: 924 FHNLEGFLEEFADI-AKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELI---VRVELS 979
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ +++ +KCC+HPYL + ++ +
Sbjct: 980 PMQKKYYKYILTRNFEALNARGGGNQVSLLN-VVMDLKKCCNHPYLFP--VAAMEAPKMP 1036
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y ++ASGKL LL ML LK G RV+I Q+
Sbjct: 1037 NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
+HN+ E D+ K+D + D LG + K + + + + V++S
Sbjct: 924 FHNLEGFLEEFADI-AKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELI---VRVELS 979
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ +++ +KCC+HPYL + ++ +
Sbjct: 980 PMQKKYYKYILTRNFEALNARGGGNQVSLLN-VVMDLKKCCNHPYLFP--VAAMEAPKMP 1036
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y ++ASGKL LL ML LK G RV+I Q+
Sbjct: 1037 NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
+HN+ E D+ K+D + D LG + K + + + + V++S
Sbjct: 924 FHNLEGFLEEFADI-AKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELI---VRVELS 979
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ +++ +KCC+HPYL + ++ +
Sbjct: 980 PMQKKYYKYILTRNFEALNARGGGNQVSLLN-VVMDLKKCCNHPYLFP--VAAMEAPKMP 1036
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y ++ASGKL LL ML LK G RV+I Q+
Sbjct: 1037 NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
+HN+ E D+ K+D + D LG + K + + + + V++S
Sbjct: 917 FHNLEGFLEEFADI-AKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELI---VRVELS 972
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ +++ +KCC+HPYL + ++ +
Sbjct: 973 PMQKKYYKYILTRNFEALNARGGGNQVSLLN-VVMDLKKCCNHPYLFP--VAAMEAPKMP 1029
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y ++ASGKL LL ML LK G RV+I Q+
Sbjct: 1030 NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1068
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
+HN+ E D+ K+D + D LG + K + + + + V++S
Sbjct: 917 FHNLEGFLEEFADI-AKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELI---VRVELS 972
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ +++ +KCC+HPYL + ++ +
Sbjct: 973 PMQKKYYKYILTRNFEALNARGGGNQVSLLN-VVMDLKKCCNHPYLFP--VAAMEAPKMP 1029
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y ++ASGKL LL ML LK G RV+I Q+
Sbjct: 1030 NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1068
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
+HN+ E D+ K+D + D LG + K + + + + V++S
Sbjct: 944 FHNLEGFLEEFADI-AKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELI---VRVELS 999
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ +++ +KCC+HPYL + ++ +
Sbjct: 1000 PMQKKYYKYILTRNFEALNARGGGNQVSLLN-VVMDLKKCCNHPYLFP--VAAMEAPKMP 1056
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y ++ASGKL LL ML LK G RV+I Q+
Sbjct: 1057 NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1095
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
+HN+ E D+ K+D + D LG + K + + + + V++S
Sbjct: 946 FHNLEGFLEEFADI-AKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELI---VRVELS 1001
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ +++ +KCC+HPYL + ++ +
Sbjct: 1002 PMQKKYYKYILTRNFEALNARGGGNQVSLLN-VVMDLKKCCNHPYLFP--VAAMEAPKMP 1058
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y ++ASGKL LL ML LK G RV+I Q+
Sbjct: 1059 NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1097
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
+HN+ E D+ K+D + D LG + K + + + + V++S
Sbjct: 945 FHNLEGFLEEFADI-AKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELI---VRVELS 1000
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ +++ +KCC+HPYL + ++ +
Sbjct: 1001 PMQKKYYKYILTRNFEALNARGGGNQVSLLN-VVMDLKKCCNHPYLFP--VAAMEAPKMP 1057
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y ++ASGKL LL ML LK G RV+I Q+
Sbjct: 1058 NGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1096
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V++S+VQLE Y +L+ I++ +K +HP++ + +
Sbjct: 679 IRVELSDVQLEYYKNILTKNYAALNEGTKGQKQSLLN-IMMELKKASNHPFMFPSAETKI 737
Query: 151 LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 738 LEGSTRREDVLRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 782
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++L RKC DHPYL D + + E+ ++L ++ASGKL LLD +L+ L ++G
Sbjct: 313 LQNVLSQLRKCVDHPYLFD----GVEPEPFEIGDHL---IEASGKLHLLDKLLAFLYSKG 365
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 366 HRVLLFSQM 374
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++L RKC DHPYL D + + E+ ++L ++ASGKL LLD +L+ L ++G
Sbjct: 313 LQNVLSQLRKCVDHPYLFD----GVEPEPFEIGDHL---IEASGKLHLLDKLLAFLYSKG 365
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 366 HRVLLFSQM 374
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++L RKC DHPYL D + + E+ E+L ++ASGKL LLD +L+ L + G
Sbjct: 305 LQNVLTQLRKCVDHPYLFD----GVEPEPFEVGEHL---IEASGKLHLLDRLLAFLYSGG 357
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 358 HRVLLFSQM 366
>RGD|1309820 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10116 "Rattus
norvegicus" [GO:0000775 "chromosome, centromeric region"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005721 "centromeric heterochromatin"
evidence=ISO] [GO:0006306 "DNA methylation" evidence=ISO]
[GO:0006342 "chromatin silencing" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1309820
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 GO:GO:0006346
GO:GO:0046651 IPI:IPI00768565 PRIDE:F1M8B3
Ensembl:ENSRNOT00000017812 OMA:XVERVEL Uniprot:F1M8B3
Length = 494
Score = 114 (45.2 bits), Expect = 0.00046, P = 0.00045
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPY+++ + + ++ ++ E L V SGK +LD ML ELK +
Sbjct: 216 LQNIMMLLRKCCNHPYMIEYPIDPV-TQEFKIDEEL---VTNSGKFLILDRMLPELKKRC 271
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 272 HKVLVFSQM 280
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++L RKC DHPYL D + + E+ ++L ++ASGKL LLD +L+ L ++G
Sbjct: 316 LQNVLSQLRKCVDHPYLFD----GVEPEPFEIGDHL---IEASGKLHLLDKLLAFLYSKG 368
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 369 HRVLLFSQM 377
>ASPGD|ASPL0000048785 [details] [associations]
symbol:AN1956 species:162425 "Emericella nidulans"
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0033553 "rDNA
heterochromatin" evidence=IEA] [GO:0044732 "mitotic spindle pole
body" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0031934 "mating-type region heterochromatin"
evidence=IEA] [GO:0031933 "telomeric heterochromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR000014 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00091 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACD01000029 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OrthoDB:EOG4GQTD1 RefSeq:XP_659560.1 ProteinModelPortal:Q5BBX4
EnsemblFungi:CADANIAT00008616 GeneID:2875239 KEGG:ani:AN1956.2
HOGENOM:HOG000192830 OMA:SFARVWA Uniprot:Q5BBX4
Length = 1443
Score = 119 (46.9 bits), Expect = 0.00046, P = 0.00046
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L++IL+ RKC HP++ K+++ D E+A + ++ V A+GKLQLL+ ML +L+ +G
Sbjct: 882 LNNILMQLRKCLCHPFIFSKAIEER-TDDPEVA-HRNL-VDAAGKLQLLELMLPKLQARG 938
Query: 186 SRVIILFQIL 195
RV++ Q L
Sbjct: 939 HRVLVFSQFL 948
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 117 (46.2 bits), Expect = 0.00053, P = 0.00053
Identities = 35/107 (32%), Positives = 52/107 (48%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 392 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 450
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ LD +L+ +K QGSRV+I Q+
Sbjct: 451 PG---PPYTTDEHI---VSNSGKMVALDKLLARIKEQGSRVLIFSQM 491
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 120 (47.3 bits), Expect = 0.00066, P = 0.00066
Identities = 29/112 (25%), Positives = 57/112 (50%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y + + L + ++ RKCC+HPYL++ +
Sbjct: 1002 IEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEK 1061
Query: 151 LVKDLELA-------EYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ + A +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1062 ILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1113
>UNIPROTKB|I3LDG1 [details] [associations]
symbol:LOC100738357 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00560000077077 EMBL:FP236283
Ensembl:ENSSSCT00000031310 OMA:ENWRTEL Uniprot:I3LDG1
Length = 323
Score = 110 (43.8 bits), Expect = 0.00066, P = 0.00066
Identities = 29/112 (25%), Positives = 58/112 (51%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y + L + ++ RKCC+HPYL++ + + +
Sbjct: 121 IEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKI 180
Query: 151 LVKDL------ELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L +D + ++ L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 181 L-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 231
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 120 (47.3 bits), Expect = 0.00067, P = 0.00066
Identities = 29/112 (25%), Positives = 57/112 (50%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y + + L + ++ RKCC+HPYL++ +
Sbjct: 1049 IEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEK 1108
Query: 151 LVKDLELA-------EYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ + A +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1109 ILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1160
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 120 (47.3 bits), Expect = 0.00067, P = 0.00067
Identities = 29/112 (25%), Positives = 57/112 (50%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y + + L + ++ RKCC+HPYL++ +
Sbjct: 1049 IEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEK 1108
Query: 151 LVKDLELA-------EYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ + A +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1109 ILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1160
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 116 (45.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 88 EYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y D + +L+ IL+ RKCC+HPYL D +
Sbjct: 416 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLN-ILMQLRKCCNHPYLFDGAE 474
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ VG SGK+ LD +L+ +K QGSRV+I Q+
Sbjct: 475 PG---PPYTTDEHI-VG--NSGKMVALDKLLARIKEQGSRVLIFSQM 515
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 116 (45.9 bits), Expect = 0.00074, P = 0.00074
Identities = 29/111 (26%), Positives = 58/111 (52%)
Query: 91 IPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++N+Q + Y V L + ++ RKCC+HPYL+ + + +
Sbjct: 624 IEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKI 683
Query: 151 L--VKDL---ELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L +D +++ L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 684 LGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 734
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 118 (46.6 bits), Expect = 0.00076, P = 0.00076
Identities = 41/159 (25%), Positives = 71/159 (44%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
++N+ E D+ ++D + D LG + K + + + + V++S
Sbjct: 830 FNNLEGFLEEFADISKEDQIK-KLHDLLGPHMLRRLKADVFKNMPAKTELI---VRVELS 885
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ I++ +KCC+HPYL + V L
Sbjct: 886 QMQKKYYKFILTRNFEALNSKGGGNQVSLLN-IMMDLKKCCNHPYLFPVAAVEAPV--LP 942
Query: 157 LAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Y VK+SGKL LL ML +L++ G RV+I Q+
Sbjct: 943 NGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQM 981
>RGD|1306794 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
Uniprot:D4AAG9
Length = 904
Score = 115 (45.5 bits), Expect = 0.00078, P = 0.00078
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 87 VEYWIPVQISNVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + +++S +Q + Y G L+ I++ +KCC+H YL+
Sbjct: 708 VEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLN-IMMELKKCCNHCYLIKPP 766
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ E ++L +++SGKL LLD +L L+ +G+RV+I Q++
Sbjct: 767 DNNEFYNKQEALQHL---IRSSGKLILLDKLLIRLRERGNRVLIFSQMV 812
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 118 (46.6 bits), Expect = 0.00083, P = 0.00083
Identities = 49/177 (27%), Positives = 80/177 (45%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQIS 96
+ N+ E D+ K+D + D LG + K + K S+ E + V++S
Sbjct: 908 FSNLEGFLEEFADI-AKEDQIKKLHDMLGPHMLRRLKADVF--KHMPSK-TELIVRVELS 963
Query: 97 NVQLEQYCGTXXXXXXXXXXXXXNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE 156
+Q + Y + V +L+ +++ +KCC+HPYL + ++ +
Sbjct: 964 PMQKKYYKFILTRNFEALNTRGGGNQVSLLN-VVMDLKKCCNHPYLFPAA--AMEAAKMP 1020
Query: 157 LAEYLDVGV-KASGKLQLLDTMLSELKNQGSRVIILFQI---LIIRAKVCENEILGY 209
Y G+ K+SGKL LL ML +LK G RV+I Q+ L + ENE GY
Sbjct: 1021 NGMYEGGGLTKSSGKLLLLQKMLRKLKEGGHRVLIFSQMTKMLDLLEDFLENE--GY 1075
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 253 228 0.00081 113 3 11 22 0.39 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 89
No. of states in DFA: 601 (64 KB)
Total size of DFA: 186 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.21u 0.14s 17.35t Elapsed: 00:00:01
Total cpu time: 17.22u 0.14s 17.36t Elapsed: 00:00:01
Start: Fri May 10 14:30:17 2013 End: Fri May 10 14:30:18 2013