BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047062
(253 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359478708|ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258707 [Vitis vinifera]
Length = 1534
Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 126/169 (74%)
Query: 25 LCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSS 84
L I + T E+ N+ S +S DV+ + L D D++ LKE+ S+++AY K DSS
Sbjct: 155 LFSGQIKESTLEFVNLLSFLDSGNDVNSSNVLKTDYNDSVSILKERLSQFIAYDCKSDSS 214
Query: 85 RFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVD 144
RFVEYW+P+ +SNVQLEQYCGTLLS ++SLCS KNDPVG L D+LIS RKCCDHPY+VD
Sbjct: 215 RFVEYWVPIPLSNVQLEQYCGTLLSNTISLCSCSKNDPVGALRDVLISTRKCCDHPYIVD 274
Query: 145 KSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
SLQS L K L EYLDVG+ ASGKLQLLD M+SE+KN+G RV+ILFQ
Sbjct: 275 LSLQSFLTKGLPEIEYLDVGINASGKLQLLDRMISEIKNRGLRVLILFQ 323
>gi|297746282|emb|CBI16338.3| unnamed protein product [Vitis vinifera]
Length = 1452
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 125/164 (76%)
Query: 30 IAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEY 89
+ + T E+ N+ S +S DV+ + L D D++ LKE+ S+++AY K DSSRFVEY
Sbjct: 840 LQESTLEFVNLLSFLDSGNDVNSSNVLKTDYNDSVSILKERLSQFIAYDCKSDSSRFVEY 899
Query: 90 WIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQS 149
W+P+ +SNVQLEQYCGTLLS ++SLCS KNDPVG L D+LIS RKCCDHPY+VD SLQS
Sbjct: 900 WVPIPLSNVQLEQYCGTLLSNTISLCSCSKNDPVGALRDVLISTRKCCDHPYIVDLSLQS 959
Query: 150 LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
L K L EYLDVG+ ASGKLQLLD M+SE+KN+G RV+ILFQ
Sbjct: 960 FLTKGLPEIEYLDVGINASGKLQLLDRMISEIKNRGLRVLILFQ 1003
>gi|255577062|ref|XP_002529415.1| mom(plant), putative [Ricinus communis]
gi|223531092|gb|EEF32941.1| mom(plant), putative [Ricinus communis]
Length = 1982
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 120/183 (65%), Gaps = 8/183 (4%)
Query: 23 GELCDASIAKQTTEYHNMPS--------LHESRGDVHRKDDLMVDAIDNLGSLKEKTSKY 74
E C S KQ+ + S L D++ L + +G+LKE+ SKY
Sbjct: 340 AESCATSFKKQSQNWPKPKSICKCKVNKLKSKLNDMNGFASLSTKSSHKMGNLKERLSKY 399
Query: 75 VAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISAR 134
+ G K DS +FVEYW+PVQISN+QLEQYC TL S SL LCS KND VG L DIL+S R
Sbjct: 400 IVNGSKSDSLKFVEYWVPVQISNIQLEQYCATLFSNSLFLCSSSKNDLVGALSDILVSIR 459
Query: 135 KCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
KCCDHPYL+D S + +L KD ++ + LD+G+KASGKLQLL ML E++N+GSRVI+LFQ+
Sbjct: 460 KCCDHPYLMDPSPEDILTKDAKVVDILDIGIKASGKLQLLQAMLIEIRNRGSRVIVLFQV 519
Query: 195 LII 197
+
Sbjct: 520 YAL 522
>gi|147834624|emb|CAN76401.1| hypothetical protein VITISV_044023 [Vitis vinifera]
Length = 431
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 128/194 (65%), Gaps = 6/194 (3%)
Query: 11 LFSLPTSR--EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLK 68
L +LP S ++ I ++T E+ N+ S +S DV+ + L +++ LK
Sbjct: 12 LMTLPGSGPVDRCSNPRAGGQIKERTLEFVNLLSFLDSGNDVNSSNVLKTGYNESVSKLK 71
Query: 69 EKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHD 128
E+ S+ +AY K DSSRFVEYW+P+ +SNVQLEQY GTLLS + SLCS KNDPVG L D
Sbjct: 72 ERLSQLIAYDCKSDSSRFVEYWVPIPLSNVQLEQYRGTLLSNTTSLCSCSKNDPVGALRD 131
Query: 129 ILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRV 188
+LIS KCCDHP++VD SLQS L K L EYLDVG+ A+GKLQLLD M+SE+K +
Sbjct: 132 VLISTPKCCDHPFIVDLSLQSFLTKGLPEIEYLDVGIDATGKLQLLDRMISEIKIE---- 187
Query: 189 IILFQILIIRAKVC 202
+I +I +R+++
Sbjct: 188 VIEEKIEFLRSEIA 201
>gi|449443580|ref|XP_004139555.1| PREDICTED: uncharacterized protein LOC101222705 [Cucumis sativus]
Length = 2887
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 111/158 (70%), Gaps = 3/158 (1%)
Query: 36 EYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQI 95
+YHN+ S+ + V KD L + DN+ LKE+ S ++AY + +SRFVEYW+P +I
Sbjct: 1181 DYHNLLSVLDVNDQVENKDTLKTNGDDNISKLKERLSYHIAY---ISTSRFVEYWVPARI 1237
Query: 96 SNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDL 155
SNVQLE YC LLS S LCS K+D + +HD+LIS RKCC+HPY+VD S+ ++ K
Sbjct: 1238 SNVQLELYCAALLSNSGLLCSSFKSDLLDNIHDLLISTRKCCNHPYIVDSSMGHVITKGH 1297
Query: 156 ELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
EYL +G+KASGKLQLLD ML E+K +GSRV+ILFQ
Sbjct: 1298 PEVEYLGIGIKASGKLQLLDAMLKEMKKKGSRVLILFQ 1335
>gi|449499771|ref|XP_004160912.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101222705
[Cucumis sativus]
Length = 1675
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 111/159 (69%), Gaps = 3/159 (1%)
Query: 36 EYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQI 95
+YHN+ S+ + V KD + DN+ LKE+ S ++AY + +SRFVEYW+P +I
Sbjct: 9 DYHNLLSVLDVNDQVENKDTPKTNGDDNISKLKERLSYHIAY---ISTSRFVEYWVPARI 65
Query: 96 SNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDL 155
SNVQLE YC LLS S LCS K+D + +HD+LIS RKCC+HPY+VD S+ ++ K
Sbjct: 66 SNVQLELYCAALLSNSGLLCSSFKSDLLDNIHDLLISTRKCCNHPYIVDSSMGHVITKGH 125
Query: 156 ELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
EYL +G+KASGKLQLLD ML E+K +GSRV+ILFQ+
Sbjct: 126 PEVEYLGIGIKASGKLQLLDAMLKEMKXKGSRVLILFQV 164
>gi|224132518|ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222837824|gb|EEE76189.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1996
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/149 (59%), Positives = 108/149 (72%), Gaps = 5/149 (3%)
Query: 50 VHRKDD-----LMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYC 104
VH+ D L++D+ G KE+ S+Y+A G K DSSR EYW+PVQ+SN+QLEQYC
Sbjct: 392 VHQSDPDGSECLVIDSSHKTGIFKERLSQYIANGCKPDSSRLKEYWVPVQLSNMQLEQYC 451
Query: 105 GTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVG 164
LL SL LCS KND G LHDILISARKCCDHPY++D SLQ L KD + A+ LD+G
Sbjct: 452 AILLLNSLLLCSSSKNDLAGSLHDILISARKCCDHPYIMDPSLQISLTKDSKEADILDIG 511
Query: 165 VKASGKLQLLDTMLSELKNQGSRVIILFQ 193
+KASGKLQLLD ML +K +G RV++LFQ
Sbjct: 512 IKASGKLQLLDAMLFNIKERGLRVLVLFQ 540
>gi|224122872|ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222857313|gb|EEE94860.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 2283
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/151 (56%), Positives = 113/151 (74%), Gaps = 2/151 (1%)
Query: 43 LHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQ 102
+H+S D++ +DL+ + G+LK++ SKY+A + D SRF EYW+PVQ+S +QLEQ
Sbjct: 759 VHQS--DLNGSEDLVTNLSPKTGNLKDQLSKYIANSPRPDPSRFKEYWVPVQLSLMQLEQ 816
Query: 103 YCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLD 162
YC TLLSKSLSLCS +NDPVG L DILIS RKCCDHPY+++ SLQ L KD + A+ LD
Sbjct: 817 YCATLLSKSLSLCSSSRNDPVGALRDILISCRKCCDHPYIMNPSLQISLTKDRKEADILD 876
Query: 163 VGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
+G+KASGKLQLL ML +K +G R ++LFQ
Sbjct: 877 IGIKASGKLQLLGEMLFSIKERGLRALVLFQ 907
>gi|356547167|ref|XP_003541988.1| PREDICTED: uncharacterized protein LOC100810773 [Glycine max]
Length = 1086
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 115/191 (60%), Gaps = 11/191 (5%)
Query: 14 LPTSREKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSK 73
+P++ E DG DAS+ ++ ++ N ++ L+ ++ + LKE+ S
Sbjct: 580 IPSATELQDGHYIDASMLQKDSQIDN-----------EKESGLITNSNSSATQLKERLSS 628
Query: 74 YVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISA 133
++ Y K DS FVEYW+PVQISN+QLEQYC LLS + L S K D V + D+LIS
Sbjct: 629 HIGYRCKSDSFSFVEYWVPVQISNLQLEQYCSILLSNASILRSSSKVDSVEAVRDVLIST 688
Query: 134 RKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
RKCC HPYLV LQ L K LE EYLD +KASGKLQLLD+ML EL+ RV+ILFQ
Sbjct: 689 RKCCSHPYLVGPELQPSLNKGLEPIEYLDFDLKASGKLQLLDSMLEELRKNDLRVLILFQ 748
Query: 194 ILIIRAKVCEN 204
+ +V N
Sbjct: 749 SIGGSGRVIGN 759
>gi|413953630|gb|AFW86279.1| hypothetical protein ZEAMMB73_952056 [Zea mays]
Length = 1990
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 118/187 (63%), Gaps = 5/187 (2%)
Query: 9 EILFSLPTSREKLDGELCDASIAKQTTEYHNMPSL--HESRGDVHRKDDLMVDAIDNLGS 66
E L LPT+ + L +S+ + E+ ++ S E G + + + D L
Sbjct: 443 EQLRRLPTNFRMV---LLSSSLKESIAEHISLLSFLNPEENGTLSVSNGVSFDTAGTLVV 499
Query: 67 LKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVL 126
LKEK ++YVA+ K DSS+ +EYW+P ++S VQLE YC LLS S +L S K D VG L
Sbjct: 500 LKEKLARYVAFERKTDSSKLLEYWVPARLSPVQLEMYCYILLSNSPALRSHSKTDSVGAL 559
Query: 127 HDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGS 186
+ILIS RKCCDHPYLVD+SLQS L KD + + LD+GV++ GKL LLD ML +++ QG
Sbjct: 560 RNILISLRKCCDHPYLVDQSLQSTLTKDHPVTDILDIGVRSCGKLLLLDRMLQQIRIQGL 619
Query: 187 RVIILFQ 193
RV+IL Q
Sbjct: 620 RVLILSQ 626
>gi|357150666|ref|XP_003575536.1| PREDICTED: uncharacterized protein LOC100840452 [Brachypodium
distachyon]
Length = 1992
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 111/175 (63%), Gaps = 12/175 (6%)
Query: 27 DASIAKQTTEYHNMPSLHESRGDVHRKDDLM----VDAIDNLGS---LKEKTSKYVAYGG 79
DA + + +Y N+ S S G+ D+ V++ID G+ LK K + +VA+
Sbjct: 550 DAILEENIVDYINLLSFVNSEGN-----DMSSISNVNSIDTPGTIAMLKSKLALHVAFER 604
Query: 80 KLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDH 139
K DSS+F+EYW+P ++S VQLE YC TL S S +L S K D VG L D+L+S RKCCDH
Sbjct: 605 KADSSKFLEYWVPARLSRVQLEIYCYTLHSNSSALRSHSKTDSVGALRDMLLSLRKCCDH 664
Query: 140 PYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
PYL D+ LQ+ L KD + LD+GV ASGKL LLD ML E++ +G RV+IL +
Sbjct: 665 PYLADQMLQASLTKDRPATDILDIGVHASGKLLLLDKMLQEIRGKGMRVVILSHV 719
>gi|356503714|ref|XP_003520650.1| PREDICTED: uncharacterized protein LOC100813574 [Glycine max]
Length = 1429
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 96/134 (71%)
Query: 60 AIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLK 119
A + +LK + KYV + K S+RFVEYW+P +S++QLEQYC LLS + LCS K
Sbjct: 351 ASSTISNLKSQLEKYVVFKCKSGSTRFVEYWVPACLSHLQLEQYCSMLLSNLMLLCSGQK 410
Query: 120 NDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLS 179
+D V LHD++IS RKCCDHPYL++ LQS + K L E L++G++ASGKLQLL+ +L
Sbjct: 411 SDSVDALHDLIISIRKCCDHPYLLNPELQSFVTKGLPDEERLNIGIQASGKLQLLEKILL 470
Query: 180 ELKNQGSRVIILFQ 193
E +++G RV+ILFQ
Sbjct: 471 EARSRGLRVLILFQ 484
>gi|357510749|ref|XP_003625663.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
gi|355500678|gb|AES81881.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
Length = 1564
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 95/131 (72%)
Query: 63 NLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP 122
++ +L+ + +Y SSRF+EYW+P Q S++QL+QYC LLS S+ LCS ++D
Sbjct: 468 SISNLQSELEQYTVLKCNSVSSRFIEYWVPAQFSSMQLKQYCSMLLSNSMLLCSGQRSDS 527
Query: 123 VGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELK 182
VG L +++IS +KCC+HPYL++ SL +L+ + L + E+ ++G+KASGKLQLL+ +L E K
Sbjct: 528 VGALRELVISTKKCCNHPYLLNPSLNNLVTRGLPVEEHFNIGIKASGKLQLLEKILFEAK 587
Query: 183 NQGSRVIILFQ 193
++ RVIILFQ
Sbjct: 588 SRKLRVIILFQ 598
>gi|222622030|gb|EEE56162.1| hypothetical protein OsJ_05065 [Oryza sativa Japonica Group]
Length = 2645
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 93/136 (68%)
Query: 58 VDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSP 117
V+A D L K + + ++AY K DSS+F+EYW+P IS QLE YC LLSKS L S
Sbjct: 715 VNADDALVMSKARFTHHIAYERKTDSSKFLEYWVPSCISQPQLEMYCSILLSKSSVLRSE 774
Query: 118 LKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTM 177
++ D VG LHDI +S +KCCDHPY+V++ L+S L + + E +D V ASGKL +LD M
Sbjct: 775 METDSVGALHDIYLSLKKCCDHPYIVNEFLRSSLSNNSNVTENIDTVVHASGKLLVLDKM 834
Query: 178 LSELKNQGSRVIILFQ 193
L+E+K + RVI+LFQ
Sbjct: 835 LNEIKKKSLRVILLFQ 850
>gi|218189907|gb|EEC72334.1| hypothetical protein OsI_05543 [Oryza sativa Indica Group]
Length = 2670
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 93/136 (68%)
Query: 58 VDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSP 117
V+A D L K + + ++AY K DSS+F+EYW+P IS QLE YC LLSKS L S
Sbjct: 732 VNADDALVMSKARFTHHIAYERKTDSSKFLEYWVPSCISQPQLEMYCSILLSKSSVLRSE 791
Query: 118 LKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTM 177
++ D VG LHDI +S +KCCDHPY+V++ L+S L + + E +D V ASGKL +LD M
Sbjct: 792 METDSVGALHDIYLSLKKCCDHPYIVNEFLRSSLSNNSNVTENIDTVVHASGKLLVLDKM 851
Query: 178 LSELKNQGSRVIILFQ 193
L+E+K + RVI+LFQ
Sbjct: 852 LNEIKKKSLRVILLFQ 867
>gi|222634806|gb|EEE64938.1| hypothetical protein OsJ_19808 [Oryza sativa Japonica Group]
Length = 1922
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 85/131 (64%), Gaps = 2/131 (1%)
Query: 36 EYHNMPSLHESRGDV--HRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPV 93
EY N+ S G V + D D L +LKEK +++VA+ K DSS+F+EYW+P
Sbjct: 505 EYINLLSFLNPEGSVISSSSNGDFTDTGDILATLKEKFARHVAFERKADSSKFLEYWVPA 564
Query: 94 QISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVK 153
++S VQLE YC TLLS S +L S + D VG L DIL+S RKCCDHPYLVD+SLQS L K
Sbjct: 565 RLSRVQLEMYCYTLLSNSPALRSHSRTDSVGALRDILVSLRKCCDHPYLVDQSLQSSLTK 624
Query: 154 DLELAEYLDVG 164
L + LD+G
Sbjct: 625 GHSLTDILDIG 635
>gi|218197392|gb|EEC79819.1| hypothetical protein OsI_21272 [Oryza sativa Indica Group]
Length = 2036
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 85/131 (64%), Gaps = 2/131 (1%)
Query: 36 EYHNMPSLHESRGDV--HRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPV 93
EY N+ S G V + D D L +LKEK +++VA+ K DSS+F+EYW+P
Sbjct: 599 EYINLLSFLNPEGSVISSSSNGDFTDTGDILATLKEKFARHVAFERKADSSKFLEYWVPA 658
Query: 94 QISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVK 153
++S VQLE YC TLLS S +L S + D VG L DIL+S RKCCDHPYLVD+SLQS L K
Sbjct: 659 RLSRVQLEMYCYTLLSNSPALRSHSRTDSVGALRDILVSLRKCCDHPYLVDQSLQSSLTK 718
Query: 154 DLELAEYLDVG 164
L + LD+G
Sbjct: 719 GHSLTDILDIG 729
>gi|297849100|ref|XP_002892431.1| hypothetical protein ARALYDRAFT_470861 [Arabidopsis lyrata subsp.
lyrata]
gi|297338273|gb|EFH68690.1| hypothetical protein ARALYDRAFT_470861 [Arabidopsis lyrata subsp.
lyrata]
Length = 2034
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 91/129 (70%), Gaps = 5/129 (3%)
Query: 80 KLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDH 139
KL SS + EYW+PVQ+S+VQLEQYC TL SKSLSL S K D +G L + L S RK CDH
Sbjct: 497 KLYSSMYPEYWVPVQLSDVQLEQYCRTLFSKSLSLSSLSKID-LGALEETLNSVRKTCDH 555
Query: 140 PYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILIIRA 199
PY++D SL+ LL K+LEL + LDV VKASGKLQLLD ML+ +K G + ++ +Q A
Sbjct: 556 PYVMDASLKQLLTKNLELHKILDVEVKASGKLQLLDEMLTHIKKNGLKAVVFYQA----A 611
Query: 200 KVCENEILG 208
+ E +LG
Sbjct: 612 QTPEGLLLG 620
>gi|18390848|ref|NP_563806.1| ATP-dependent helicase family protein [Arabidopsis thaliana]
gi|30680475|ref|NP_849608.1| ATP-dependent helicase family protein [Arabidopsis thaliana]
gi|75185434|sp|Q9M658.1|MOM1_ARATH RecName: Full=Helicase protein MOM1; AltName: Full=Protein
MAINTENANCE OF METHYLATION; AltName: Full=Protein
MORPHEUS MOLECULE 1
gi|8132770|gb|AAF73381.1| MOM [Arabidopsis thaliana]
gi|332190115|gb|AEE28236.1| ATP-dependent helicase family protein [Arabidopsis thaliana]
gi|332190116|gb|AEE28237.1| ATP-dependent helicase family protein [Arabidopsis thaliana]
Length = 2001
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
Query: 80 KLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDH 139
K SS + EYW+PVQ+S+VQLEQYC TL SKSLSL S K D +G L + L S RK CDH
Sbjct: 471 KFYSSVYPEYWVPVQLSDVQLEQYCQTLFSKSLSLSSLSKID-LGALEETLNSVRKTCDH 529
Query: 140 PYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
PY++D SL+ LL K+LEL E LDV +KASGKL LLD ML+ +K G + ++ +Q
Sbjct: 530 PYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQ 583
>gi|8132768|gb|AAF73380.1| MOM [Arabidopsis thaliana]
Length = 2001
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
Query: 80 KLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDH 139
K SS + EYW+PVQ+S+VQLEQYC TL SKSLSL S K D +G L + L S RK CDH
Sbjct: 471 KFYSSVYPEYWVPVQLSDVQLEQYCQTLFSKSLSLSSLSKID-LGALEETLNSVRKTCDH 529
Query: 140 PYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
PY++D SL+ LL K+LEL E LDV +KASGKL LLD ML+ +K G + ++ +Q
Sbjct: 530 PYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQ 583
>gi|8778840|gb|AAF79839.1|AC026875_19 T6D22.14 [Arabidopsis thaliana]
Length = 2254
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
Query: 80 KLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDH 139
K SS + EYW+PVQ+S+VQLEQYC TL SKSLSL S K D +G L + L S RK CDH
Sbjct: 703 KFYSSVYPEYWVPVQLSDVQLEQYCQTLFSKSLSLSSLSKID-LGALEETLNSVRKTCDH 761
Query: 140 PYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
PY++D SL+ LL K+LEL E LDV +KASGKL LLD ML+ +K G + ++ +Q
Sbjct: 762 PYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQ 815
>gi|242063726|ref|XP_002453152.1| hypothetical protein SORBIDRAFT_04g000870 [Sorghum bicolor]
gi|241932983|gb|EES06128.1| hypothetical protein SORBIDRAFT_04g000870 [Sorghum bicolor]
Length = 2205
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Query: 61 IDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKN 120
D+L L+ + ++++AY K SS+F+EYW+P +S VQLE Y LL+ S L S +
Sbjct: 365 TDSLAMLRARFTRHIAYERKAGSSKFLEYWVPAYLSQVQLELYSSILLANSSVLQSQMTT 424
Query: 121 DPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSE 180
D G L D+++S KCC+HP LVD LQ L ++ E D + SGKL LL+ ML E
Sbjct: 425 DSAGALCDVVMSLWKCCNHPCLVD--LQHSLANTRDIIESRDDRMCVSGKLLLLEKMLKE 482
Query: 181 LKNQGSRVIILFQ 193
++N+ RVI+LFQ
Sbjct: 483 IRNKRLRVIVLFQ 495
>gi|302770637|ref|XP_002968737.1| hypothetical protein SELMODRAFT_440558 [Selaginella moellendorffii]
gi|300163242|gb|EFJ29853.1| hypothetical protein SELMODRAFT_440558 [Selaginella moellendorffii]
Length = 2037
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 62/106 (58%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
EYW+P Q+S VQ+ QYC ++ L S + +LH+++ R CC HPYLV ++L
Sbjct: 694 EYWVPAQMSPVQVHQYCLLIVKHFELLRSGNMSQGDNILHELVSVLRDCCSHPYLVSETL 753
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
+ + + E+L+ G++ASGKL+L+ MLS + +I+ Q
Sbjct: 754 VKSIGELVPKGEWLNAGIRASGKLELMHKMLSHFYLNKKKTLIIVQ 799
>gi|242091650|ref|XP_002436315.1| hypothetical protein SORBIDRAFT_10g000300 [Sorghum bicolor]
gi|241914538|gb|EER87682.1| hypothetical protein SORBIDRAFT_10g000300 [Sorghum bicolor]
Length = 414
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 47/60 (78%)
Query: 134 RKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
++CCDHPYLVD+SLQS L KD + + LD+GV++ GKL LLD ML +++ QG RV+IL Q
Sbjct: 2 QQCCDHPYLVDQSLQSTLTKDHPITDILDIGVRSCGKLLLLDRMLQQIRIQGLRVLILSQ 61
>gi|357512931|ref|XP_003626754.1| Lymphoid-specific helicase [Medicago truncatula]
gi|355520776|gb|AET01230.1| Lymphoid-specific helicase [Medicago truncatula]
Length = 248
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%), Gaps = 4/61 (6%)
Query: 133 ARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILF 192
+R+CC+HPY++D+SLQ LL+K +L+VG+KASGKLQLLD+ML+EL R +ILF
Sbjct: 10 SRQCCNHPYIIDESLQPLLLK----VAFLNVGIKASGKLQLLDSMLTELITNKLRALILF 65
Query: 193 Q 193
Q
Sbjct: 66 Q 66
>gi|302817901|ref|XP_002990625.1| hypothetical protein SELMODRAFT_450676 [Selaginella moellendorffii]
gi|300141547|gb|EFJ08257.1| hypothetical protein SELMODRAFT_450676 [Selaginella moellendorffii]
Length = 1228
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH------DILISARKCCDHPY 141
EYW+P Q+S VQ+ QYC ++ L S + +LH +IL+ +CC HPY
Sbjct: 492 EYWVPAQMSPVQVHQYCLLIVKHFELLRSGNMSQGDNILHELLSSDNILLFLEQCCSHPY 551
Query: 142 LVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
LV ++L + + + E+L+ G++ASGKL+L+ MLS + +I+ Q
Sbjct: 552 LVSETLAKSVGELVPQEEWLNAGIRASGKLELMHKMLSHFYLNKKKTLIIVQ 603
>gi|402222785|gb|EJU02851.1| hypothetical protein DACRYDRAFT_21795 [Dacryopinax sp. DJM-731 SS1]
Length = 2109
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 80 KLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPL-----------KNDPVGVLHD 128
+LD E +P+ +S +Q E Y G LLSK+ L L N G L +
Sbjct: 978 ELDLPARNEVIVPLSMSTLQKEVYRG-LLSKNAELIGQLVVNVSASTAKAANIKKGTLTN 1036
Query: 129 ILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRV 188
+L+ RKC HPYLV L+ KDL AE + V+AS KL L ML +LK +G RV
Sbjct: 1037 LLMELRKCLQHPYLVSSDLEP---KDLPDAELHRIYVEASTKLVFLQKMLPQLKERGHRV 1093
Query: 189 IILFQILI 196
++ Q +I
Sbjct: 1094 LLFSQFVI 1101
>gi|429855384|gb|ELA30342.1| chromatin remodeling complex subunit [Colletotrichum gloeosporioides
Nara gc5]
Length = 2046
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
Query: 63 NLGSLKEKTSKYVAYGGKLDSSRFV----EYWIPVQISNVQLEQYCGTLLSKSLSLCSPL 118
NL L + +Y K +F+ + +PV +S +Q E+ C ++++KS L +
Sbjct: 1039 NLPELHGRIKQYFLRRTKAQVLKFLPPMAQIIVPVSMSILQ-EKLCKSIMAKSPDLIKAI 1097
Query: 119 -KNDPV-----GVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQ 172
+D + G L++IL+ RKC HP++ +++ V +++ E L V ASGKL
Sbjct: 1098 FADDKINKKERGSLNNILMQLRKCLCHPFMYSDAIEERAVDHVKMHENL---VSASGKLM 1154
Query: 173 LLDTMLSELKNQGSRVIILFQIL 195
LL ML +LK +G RV+I Q L
Sbjct: 1155 LLSIMLPKLKERGHRVLIFSQFL 1177
>gi|452822657|gb|EME29674.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 2042
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDK----S 146
I V+++ Q + Y TL L K+ VG LH+I + RKCC+HPYL+
Sbjct: 664 ISVELTRTQKKWYRATLEQNFSFLEKGAKSSNVGNLHNIFMELRKCCNHPYLIKGVEIIE 723
Query: 147 LQSLLVKDLE-LAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
Q L D E L ++L ++ASGKL L+D +L +L+ G +V+I Q++ +
Sbjct: 724 TQHLRSTDDESLMQHL---IEASGKLVLVDKLLPKLRESGHKVLIFSQMIRV 772
>gi|167535609|ref|XP_001749478.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772106|gb|EDQ85763.1| predicted protein [Monosiga brevicollis MX1]
Length = 1903
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 10/137 (7%)
Query: 62 DNLGSLKEKTSKYVAYGGKLD----SSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSP 117
+ + +LK K K++ K D + VE +P ++S++Q ++ LL+K+ S +
Sbjct: 838 EEIATLKPKLKKHMLRRLKTDVFKDMPQKVEVVVPAKLSSMQ-RRFYKELLAKNYSFLTA 896
Query: 118 LKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTM 177
V L+++L+ RKC +HPYL D + V+D + L VG ASGK LLD M
Sbjct: 897 -TTQGVSSLNNLLMQLRKCANHPYLFDDAEPE--VEDHDAMVKLLVG--ASGKTLLLDMM 951
Query: 178 LSELKNQGSRVIILFQI 194
L +LK QG RV+I Q+
Sbjct: 952 LRKLKEQGHRVLIFSQM 968
>gi|410917974|ref|XP_003972461.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Takifugu rubripes]
Length = 1036
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 391 ELKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 449
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
DL L V SGK+ +LD +L +LK+QGSRV+I Q +L I C
Sbjct: 450 PGPPYTTDLHL-------VVNSGKMVVLDKLLPKLKDQGSRVLIFSQMTRVLDILEDYCM 502
Query: 204 NEILGYC 210
GYC
Sbjct: 503 WRNYGYC 509
>gi|299471324|emb|CBN79280.1| CHROMODOMAIN HELICASE DNA BINDING [Ectocarpus siliculosus]
Length = 2463
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 36 EYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFV----EYWI 91
++ N E GD+ R +D+ L+E Y+ K D + V E I
Sbjct: 1020 KFRNKDQFVEDYGDLQRAEDV--------SRLQENIKPYLLRRMKEDVEKAVPPKEETII 1071
Query: 92 PVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG-VLHDILISARKCCDHPYLVDKSLQSL 150
V+++ +Q + Y + L K G L ++ + RKCC+HPYL+ ++
Sbjct: 1072 EVELTEIQKQYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAV 1131
Query: 151 LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
V+ + E + VK SGKL LLD +L LK QG RV++ Q I+
Sbjct: 1132 RVQMGDSGEDKEHLVKHSGKLVLLDKLLPRLKQQGHRVLLFSQFKIM 1178
>gi|47217344|emb|CAG11049.1| unnamed protein product [Tetraodon nigroviridis]
Length = 985
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 341 EIKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 399
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
DL L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 400 PGPPYTTDLHL-------VVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCM 452
Query: 204 NEILGYC 210
GYC
Sbjct: 453 WRNYGYC 459
>gi|393238277|gb|EJD45815.1| hypothetical protein AURDEDRAFT_151858 [Auricularia delicata
TFB-10046 SS5]
Length = 1905
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGV-----LHDILISARKCCDHPYL 142
E +PV ++ +Q Y + + L S L+ G L ++L+ RKC HPYL
Sbjct: 1078 ELIVPVTMTQLQKTVYKSVIGRNAEVLQSLLRGGKGGKLAGKQLMNVLMHLRKCIQHPYL 1137
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
VD L+ V E+ + L V AS KLQLL TML +LK +G RV+I Q +I+
Sbjct: 1138 VDPELEPRDVTPREMHKNL---VDASAKLQLLKTMLPKLKERGHRVLIFTQFVIV 1189
>gi|125995400|ref|NP_001075098.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Danio rerio]
gi|124481629|gb|AAI33098.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Danio rerio]
Length = 1028
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/127 (37%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L ++L+ RKCC+HPYL D +
Sbjct: 385 EIKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLL-NVLMQLRKCCNHPYLFDGAE 443
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
DL L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 444 PGPPYTTDLHL-------VVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCM 496
Query: 204 NEILGYC 210
GYC
Sbjct: 497 WRNYGYC 503
>gi|396082326|gb|AFN83936.1| SNF2 DNA/RNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 828
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 94 QISNVQLEQYCGTLLSKSLSLCSPLKN--DPVGVLHDILISARKCCDHPYLVDKSLQSLL 151
++S +Q E Y LL + LS PL N DP G+L ++++ RKCC+HPYL +
Sbjct: 290 KLSAMQREWY-RMLLKRDLS---PLGNTRDPKGMLMNVVMQLRKCCNHPYLFPDAEPEPY 345
Query: 152 VKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D + E SGK+ +LD +L+ K +GSRV+I Q+
Sbjct: 346 TNDKHIIE-------NSGKMMMLDKLLANFKAKGSRVLIFSQM 381
>gi|74197316|dbj|BAC37509.2| unnamed protein product [Mus musculus]
Length = 378
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 54 EVKIYVGLSKMQREWYTRILIKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 112
Query: 148 QS-LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 113 PGPLFTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 153
>gi|348524410|ref|XP_003449716.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Oreochromis
niloticus]
Length = 1036
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L ++L+ RKCC+HPYL D +
Sbjct: 392 EIKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLL-NVLMQLRKCCNHPYLFDGAE 450
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
D+ LA SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 451 PGPPYTTDIHLA-------VNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRMLDILEDYCM 503
Query: 204 NEILGYC 210
GYC
Sbjct: 504 WRNYGYC 510
>gi|453089622|gb|EMF17662.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 1534
Score = 60.1 bits (144), Expect = 8e-07, Method: Composition-based stats.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 48 GDVHRKD--DLMV-DAIDNLGSLKEKTSKYVAYGGKL----DSSRFVEYWIPVQISNVQL 100
G +H + DLM DA L L E S Y+ K D E I V++S+VQL
Sbjct: 572 GKIHVDEHIDLMSEDASKKLSELTEAISPYMIRRTKQKVENDLPPKTEKIIRVELSDVQL 631
Query: 101 EQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEY 160
E Y L +L + K +L +I++ +K +HP+L + +L E
Sbjct: 632 EYYKNILTRNYAALNAGSKGAKTSLL-NIMMELKKASNHPFLFPAAEDRILAGSDSRDEQ 690
Query: 161 LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L + +SGK+ LLD +L+++K G RV+I Q++
Sbjct: 691 LKALITSSGKMMLLDQLLTKMKKDGHRVLIFSQMV 725
>gi|123432105|ref|XP_001308354.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
gi|121890030|gb|EAX95424.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
Length = 1612
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 88/174 (50%), Gaps = 21/174 (12%)
Query: 36 EYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDS----SRFVEYWI 91
E+ ++P E G + D I+ L +L+E Y+ K D ++ E I
Sbjct: 420 EFEDLPEFLEQFGHI--------DDINTLQALQELIQPYILRRRKNDVEATLTKLEETII 471
Query: 92 PVQISNVQLEQYCGTLLSKSLS-LCSPLKNDPVGVLHDILISARKCCDHPYL-------V 143
V+++ +Q +QY TLL ++ S L + + L ++++ RK C+HPYL +
Sbjct: 472 EVELTRIQ-KQYYTTLLHENASVLMQQITGGSLPSLQNLMMQLRKVCNHPYLIKGASEFI 530
Query: 144 DKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
+K ++ L + E L +++SGK+ LLD +L +L +G +V+I Q++ +
Sbjct: 531 EKMIREKLSQASEDEIQLQALIESSGKMILLDKLLPKLHQEGHKVLIFSQMVKV 584
>gi|157134598|ref|XP_001663322.1| chromodomain helicase DNA binding protein [Aedes aegypti]
gi|108870420|gb|EAT34645.1| AAEL013135-PA [Aedes aegypti]
Length = 340
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL ++
Sbjct: 23 EFIVRVELSQMQ-KKYYKYILTRNFEALNPRGGGGACSLINIMMDLKKCCNHPYLFQAAV 81
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + E + KA+GKL LL+ ML +LK QG RV+I Q+
Sbjct: 82 EEAPLGPGGSYEIQSL-TKAAGKLVLLEKMLKQLKEQGHRVLIFSQM 127
>gi|324499809|gb|ADY39928.1| Chromodomain-helicase-DNA-binding protein 3 [Ascaris suum]
Length = 1844
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 7/126 (5%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL K+
Sbjct: 867 ELIVRVELSPMQ-KKYYKNILTRNFEALNPKGGGTQVSLLNIIMDLKKCCNHPYLFPKA- 924
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
S+ + Y +KASGK LL ML +LK QG RV+I Q +L + CE
Sbjct: 925 -SIEAPKHKNGMYEGTALIKASGKFILLQKMLRKLKEQGHRVLIFSQMTKMLDVLEDFCE 983
Query: 204 NEILGY 209
NE Y
Sbjct: 984 NEGYKY 989
>gi|56118945|ref|NP_001007993.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Xenopus (Silurana)
tropicalis]
gi|51704071|gb|AAH80870.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Xenopus (Silurana)
tropicalis]
Length = 1049
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 405 EIKIYVGLSKMQREWYTKILMKDIDILNSSGKTDKMRLL-NILMQLRKCCNHPYLFDGAE 463
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L LK QGSRV+I Q+
Sbjct: 464 PGPPYTTDMHL-------VTNSGKMVVLDKLLPRLKEQGSRVLIFSQM 504
>gi|322706938|gb|EFY98517.1| chromo domain-containing protein 1 [Metarhizium anisopliae ARSEF
23]
Length = 1668
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 48 GDVHRKDDL----MVDAIDNLGSLKEKTSKYVAYGGK----LDSSRFVEYWIPVQISNVQ 99
G V+ +DL VDA + L L + + Y+ K D E I V++S+VQ
Sbjct: 650 GKVNIDEDLDSLSAVDAQEKLEELHKSIAPYILRRTKETVESDLPPKTEKIIRVELSDVQ 709
Query: 100 LEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAE 159
L+ Y L +LC +L +I++ +K +HPY+ + + +L + +
Sbjct: 710 LDYYKNILTRNYSALCDATGGHKNSLL-NIMMELKKISNHPYMFPGAEERVLAGSVRRED 768
Query: 160 YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + +SGK+ LLD +LS+LK G RV+I Q++
Sbjct: 769 QIKGLITSSGKMMLLDQLLSKLKKDGHRVLIFSQMV 804
>gi|242767903|ref|XP_002341462.1| chromodomain helicase (Chd1), putative [Talaromyces stipitatus ATCC
10500]
gi|218724658|gb|EED24075.1| chromodomain helicase (Chd1), putative [Talaromyces stipitatus ATCC
10500]
Length = 1499
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y +L+K+ + + N L +I++ +K +HP++ +
Sbjct: 674 EKIIRVELSDVQLEYY-KNILTKNYAALNEGANGQKQSLLNIMMELKKASNHPFMFPNAE 732
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
LL + + L + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 733 AKLLEGNTRREDLLRIMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 780
>gi|358391497|gb|EHK40901.1| hypothetical protein TRIATDRAFT_227075 [Trichoderma atroviride IMI
206040]
Length = 1659
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 48 GDVHRKDDL----MVDAIDNLGSLKEKTSKYVAYGGK----LDSSRFVEYWIPVQISNVQ 99
G V +DL VDA + L L + Y+ K D E I V++S+VQ
Sbjct: 649 GKVSIDEDLDSLSAVDAQEKLQELHRSIAPYILRRTKETVESDLPPKTEKIIRVELSDVQ 708
Query: 100 LEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAE 159
L+ Y L +LC +L +I++ +K +HPY+ + + +L + +
Sbjct: 709 LDYYKNILTRNYSALCDATSGHKNSLL-NIMMELKKVSNHPYMFPGAEERVLAGSVRRED 767
Query: 160 YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + +SGK+ LLD +LS+LK G RV+I Q++
Sbjct: 768 QIKGLIASSGKMMLLDQLLSKLKKDGHRVLIFSQMV 803
>gi|354488354|ref|XP_003506335.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Cricetulus griseus]
Length = 1042
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 399 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 457
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 458 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 498
>gi|157427958|ref|NP_001098886.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Bos taurus]
gi|157279332|gb|AAI53226.1| SMARCA5 protein [Bos taurus]
Length = 1052
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|296478735|tpg|DAA20850.1| TPA: SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin a5 [Bos taurus]
gi|440889489|gb|ELR44647.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Bos grunniens mutus]
Length = 1052
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|391339772|ref|XP_003744221.1| PREDICTED: uncharacterized protein LOC100904905 [Metaseiulus
occidentalis]
Length = 4725
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V+++NVQ + Y L LC ++ P L + ++ RKCC HPYL+ +
Sbjct: 2056 ETIIEVELTNVQKKYYRAILEKNFTFLCKGSQSVPS--LMNTMMELRKCCIHPYLIAGAE 2113
Query: 148 QSLLVKDLELAEYLDVG----VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L ++ L+ +D V+ASGKL L D +L LK G RV+I Q++
Sbjct: 2114 EQIL-QEARLSGSVDYALQALVQASGKLVLCDKLLPRLKEGGHRVLIFSQMV 2164
>gi|417405705|gb|JAA49556.1| Putative chromatin remodeling complex swi/snf component swi2
[Desmodus rotundus]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|353235686|emb|CCA67695.1| probable CHD1-transcriptional regulator [Piriformospora indica DSM
11827]
Length = 1527
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 15/125 (12%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKN-----DPVG-----VLHDILISARKCC 137
E +PV +S +Q Y +L+ +L++ S L N P G L +IL+ RK
Sbjct: 821 EVIVPVSLSKLQKSIY-KSLIESNLTVLSNLVNAGASFKPKGKATQASLRNILMETRKLV 879
Query: 138 DHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
HPYLV+ L+ E+ L + ASGKL+ L+ ML LK +G RV +LF ++
Sbjct: 880 QHPYLVEPDLERETKTTEEMNRQL---IDASGKLKFLEVMLERLKAKGKRV-LLFSQFVV 935
Query: 198 RAKVC 202
R +C
Sbjct: 936 RIFLC 940
>gi|355749594|gb|EHH53993.1| hypothetical protein EGM_14722 [Macaca fascicularis]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|344291654|ref|XP_003417549.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Loxodonta
africana]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|452848207|gb|EME50139.1| hypothetical protein DOTSEDRAFT_68860 [Dothistroma septosporum
NZE10]
Length = 1602
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L + K +L +I++ +K +HP++ +
Sbjct: 681 EKIIRVELSDVQLEYYKNILTRNYAALNAGAKAGKTSLL-NIMMELKKASNHPFMFQNAE 739
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ LL + L + +SGKL LLD +L+++K G RV+I Q++
Sbjct: 740 ERLLAGSESREDLLKAMITSSGKLMLLDQLLTKMKKDGHRVLIFSQMV 787
>gi|426345573|ref|XP_004040481.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Gorilla
gorilla gorilla]
Length = 1000
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 357 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 415
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 416 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 456
>gi|426246999|ref|XP_004017274.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Ovis aries]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|388453347|ref|NP_001253253.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
gi|332217318|ref|XP_003257807.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Nomascus
leucogenys]
gi|402870539|ref|XP_003899273.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Papio
anubis]
gi|355687630|gb|EHH26214.1| hypothetical protein EGK_16126 [Macaca mulatta]
gi|380783625|gb|AFE63688.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
gi|383408717|gb|AFH27572.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
gi|384941584|gb|AFI34397.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|432114072|gb|ELK36119.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Myotis davidii]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|431918301|gb|ELK17528.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Pteropus alecto]
Length = 1149
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 408 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 466
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 467 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 507
>gi|57096815|ref|XP_532676.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 isoform 1
[Canis lupus familiaris]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|325651836|ref|NP_003592.3| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Homo sapiens]
gi|57014128|sp|O60264.1|SMCA5_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5;
Short=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin A5; AltName: Full=Sucrose
nonfermenting protein 2 homolog; Short=hSNF2H
gi|2967452|dbj|BAA25173.1| hSNF2H [Homo sapiens]
gi|18606276|gb|AAH23144.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Homo sapiens]
gi|119625476|gb|EAX05071.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Homo sapiens]
gi|168275690|dbj|BAG10565.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [synthetic construct]
gi|325463895|gb|ADZ15718.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [synthetic construct]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|410956805|ref|XP_003985028.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Felis
catus]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|410294848|gb|JAA26024.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Pan troglodytes]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|403272423|ref|XP_003928064.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Saimiri
boliviensis boliviensis]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|397500075|ref|XP_003820752.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Pan
paniscus]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|395834498|ref|XP_003790238.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Otolemur
garnettii]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|355720696|gb|AES07016.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Mustela putorius furo]
Length = 1030
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|351713893|gb|EHB16812.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5, partial [Heterocephalus
glaber]
Length = 993
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 350 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 408
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 409 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 449
>gi|348582546|ref|XP_003477037.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Cavia
porcellus]
Length = 1051
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 408 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 466
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 467 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 507
>gi|335293809|ref|XP_003129222.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Sus scrofa]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|301777862|ref|XP_002924349.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Ailuropoda melanoleuca]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|296195484|ref|XP_002745366.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 isoform 1
[Callithrix jacchus]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|291401180|ref|XP_002716976.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a5-like [Oryctolagus cuniculus]
Length = 1051
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 408 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 466
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 467 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 507
>gi|281337316|gb|EFB12900.1| hypothetical protein PANDA_013661 [Ailuropoda melanoleuca]
Length = 912
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 326 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 384
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 385 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 425
>gi|221046276|dbj|BAH14815.1| unnamed protein product [Homo sapiens]
Length = 995
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 352 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 410
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 411 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 451
>gi|194380928|dbj|BAG64032.1| unnamed protein product [Homo sapiens]
Length = 995
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 352 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 410
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 411 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 451
>gi|149698191|ref|XP_001502076.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Equus
caballus]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|148678936|gb|EDL10883.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Mus musculus]
Length = 993
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 350 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 408
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 409 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 449
>gi|410223740|gb|JAA09089.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Pan troglodytes]
gi|410267210|gb|JAA21571.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Pan troglodytes]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|157817975|ref|NP_001100889.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Rattus norvegicus]
gi|149037939|gb|EDL92299.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 995
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 352 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 410
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 411 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 451
>gi|40254124|ref|NP_444354.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Mus musculus]
gi|55977469|sp|Q91ZW3.1|SMCA5_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5; AltName:
Full=Sucrose nonfermenting protein 2 homolog;
Short=mSnf2h
gi|16551316|gb|AAL25793.1|AF375046_1 ATP-dependent chromatin remodeling protein SNF2H [Mus musculus]
gi|31419851|gb|AAH53069.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Mus musculus]
Length = 1051
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 408 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 466
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 467 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 507
>gi|449018707|dbj|BAM82109.1| chromodomain helicase DNA binding protein CHD [Cyanidioschyzon
merolae strain 10D]
Length = 2014
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 26/175 (14%)
Query: 33 QTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFV----E 88
+ ++ N ++ GD+ +A++NL +L Y+ K D + + E
Sbjct: 544 EPAKFPNEKEFQQAYGDIRD-----AEAVENLKAL---LRPYLLRRMKEDVEKAIPPKEE 595
Query: 89 YWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQ 148
I V+++ +Q + Y L K + VG L +I++ RKCC+HPYL+
Sbjct: 596 TLISVELTRIQKQWYRALYEQNFAFLEQGGKRNNVGNLRNIVMELRKCCNHPYLIRG--- 652
Query: 149 SLLVKDLELAEYLDVG--------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
V+++E +G V+ASGKL L+D +L L+ +G RV+I Q++
Sbjct: 653 ---VEEIETQSLAALGEDALMRHLVEASGKLVLVDKLLPVLREKGHRVLIFSQMI 704
>gi|410442557|ref|NP_001258588.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Pan troglodytes]
gi|343962353|dbj|BAK62764.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Pan troglodytes]
Length = 1052
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 467
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 468 PGPPYTADMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|212542839|ref|XP_002151574.1| chromodomain helicase (Chd1), putative [Talaromyces marneffei ATCC
18224]
gi|210066481|gb|EEA20574.1| chromodomain helicase (Chd1), putative [Talaromyces marneffei ATCC
18224]
Length = 1497
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S++QLE Y +L+K+ + + N L +I++ +K +HP++ +
Sbjct: 674 EKIIRVELSDIQLEYY-KNILTKNYAALNEGANGQKQSLLNIMMELKKASNHPFMFPNAE 732
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
LL + + L + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 733 AKLLEGNTRREDLLRIMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 780
>gi|238584350|ref|XP_002390535.1| hypothetical protein MPER_10168 [Moniliophthora perniciosa FA553]
gi|215454048|gb|EEB91465.1| hypothetical protein MPER_10168 [Moniliophthora perniciosa FA553]
Length = 350
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 71/126 (56%), Gaps = 13/126 (10%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG--------VLHDILISARKCCDHPYL 142
+PV ++ +Q +Q ++LSK+++L + L N ++++L+ RKC HPYL
Sbjct: 198 VPVTMAPLQ-KQVYRSILSKNVNLLASLTNPSASAQSSGGKKTVNNMLMQLRKCLQHPYL 256
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILIIRAKVC 202
D+ ++ ++L + E + + AS KL+ L +L +LK +G RV +LF +I V
Sbjct: 257 YDQDIEP---RNLSIQETHEKLIDASAKLRFLRILLPKLKARGHRV-LLFSQFVIALDVI 312
Query: 203 ENEILG 208
E+ ++G
Sbjct: 313 EDFLVG 318
>gi|322701089|gb|EFY92840.1| chromo domain-containing protein 1 [Metarhizium acridum CQMa 102]
Length = 1663
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 48 GDVHRKDDL----MVDAIDNLGSLKEKTSKYVAYGGK----LDSSRFVEYWIPVQISNVQ 99
G V +DL VDA + L L + + Y+ K D E I V++S+VQ
Sbjct: 662 GKVDIDEDLDSLSAVDAQEKLEELHKSIAPYILRRTKETVESDLPPKTEKIIRVELSDVQ 721
Query: 100 LEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAE 159
L+ Y L +LC +L +I++ +K +HPY+ + + +L + +
Sbjct: 722 LDYYKNILTRNYSALCDATGGHKNSLL-NIMMELKKISNHPYMFPGAEERVLAGSVRRED 780
Query: 160 YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + +SGK+ LLD +LS+LK G RV+I Q++
Sbjct: 781 QIKGLITSSGKMMLLDQLLSKLKKDGHRVLIFSQMV 816
>gi|157134600|ref|XP_001663323.1| chromodomain helicase DNA binding protein [Aedes aegypti]
gi|108870421|gb|EAT34646.1| AAEL013136-PA [Aedes aegypti]
Length = 1983
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL ++
Sbjct: 967 EFIVRVELSQMQ-KKYYKYILTRNFEALNPRGGGGACSLINIMMDLKKCCNHPYLFQAAV 1025
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + E + KA+GKL LL+ ML +LK QG RV+I Q+
Sbjct: 1026 EEAPLGPGGSYEIQSL-TKAAGKLVLLEKMLKQLKEQGHRVLIFSQM 1071
>gi|401827829|ref|XP_003888207.1| SNF2-like helicase [Encephalitozoon hellem ATCC 50504]
gi|392999407|gb|AFM99226.1| SNF2-like helicase [Encephalitozoon hellem ATCC 50504]
Length = 823
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 94 QISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVK 153
++S +Q E Y LL + LS + DP G+L ++++ RKCC+HPYL +
Sbjct: 286 KLSPMQREWY-RMLLKRDLSPLGSTR-DPKGMLMNVVMQLRKCCNHPYLFPDAEPEPYTN 343
Query: 154 DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
D + E SGK+ +LD +L+ LK +GSRV+I Q+ ++
Sbjct: 344 DKHIIE-------NSGKMVMLDKLLANLKAKGSRVLIFSQMSMM 380
>gi|380472285|emb|CCF46859.1| SNF2 super family protein [Colletotrichum higginsianum]
Length = 1398
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 10/111 (9%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKND------PVGVLHDILISARKCCDHPYLVD 144
+PV +S +Q E+ C ++++KS L + D G L++IL+ RKC HP++
Sbjct: 861 VPVSMSILQ-EKLCKSIIAKSPDLIKAIFADDKINKKERGSLNNILMQLRKCLCHPFMYS 919
Query: 145 KSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++++ ++ + L V ASGKL LL+ ML +LK +G RV+I Q L
Sbjct: 920 EAVEERSADHAKMHQNL---VSASGKLMLLNIMLPKLKERGHRVLIFSQFL 967
>gi|148228303|ref|NP_001083868.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Xenopus laevis]
gi|49899007|gb|AAH76715.1| ISWI protein [Xenopus laevis]
Length = 1046
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 402 EIKIYVGLSKMQREWYTKILMKDIDILNSSGKTDKMRLL-NILMQLRKCCNHPYLFDGAE 460
Query: 148 QS-LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
DL LA SGK+ +LD +L +LK Q SRV+I Q+
Sbjct: 461 PGPPYTTDLHLA-------TNSGKMMVLDKLLPKLKEQDSRVLIFSQM 501
>gi|342866497|gb|EGU72158.1| hypothetical protein FOXB_17402 [Fusarium oxysporum Fo5176]
Length = 2124
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V++S+VQLE Y L +LC N L +I++ +K +HPY+ +
Sbjct: 680 TEKIIRVELSDVQLEYYKNILTRNYTALCDAT-NGHKNSLLNIMMELKKISNHPYMFPGA 738
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + + +SGK+ LLD +LS+L G RV+I Q++
Sbjct: 739 EEKVLAGSVRREDQIKGLIASSGKMMLLDQLLSKLNKDGHRVLIFSQMV 787
>gi|410903295|ref|XP_003965129.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Takifugu rubripes]
Length = 1689
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L +K G L +I++ +KCC+H YL+
Sbjct: 701 VEQILRVEMSAIQKQYYKWILTRNYKALSKGVKGSTSGFL-NIMMELKKCCNHCYLI--- 756
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
L DL E L V++SGKL LLD +L LK +G RV+I Q++ +
Sbjct: 757 --RLPEDDLNKTEALQQLVRSSGKLVLLDKLLIRLKERGHRVLIFSQMVRM 805
>gi|7243213|dbj|BAA92654.1| KIAA1416 protein [Homo sapiens]
Length = 1967
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ + +
Sbjct: 444 IEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEK 502
Query: 150 LL--VKDLELAEYLDVG----VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L K+ AE D ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 503 ILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 554
>gi|344273113|ref|XP_003408371.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Loxodonta
africana]
Length = 2997
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHSAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|194874037|ref|XP_001973329.1| GG16034 [Drosophila erecta]
gi|190655112|gb|EDV52355.1| GG16034 [Drosophila erecta]
Length = 869
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S++Q +++ +L+K+ V L +I++ RKCC+HPYL +
Sbjct: 481 EFIVRVELSSMQ-KKFYKFILTKNFKALKQKGGGGVCSLLNIMMELRKCCNHPYLFPSAA 539
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + L E ++ +KASGKL+LL ML +LK RV+I Q+
Sbjct: 540 EDASISPSGLYE-INSLIKASGKLELLSKMLKQLKADNHRVLIFSQM 585
>gi|444720770|gb|ELW61544.1| Chromodomain-helicase-DNA-binding protein 7 [Tupaia chinensis]
Length = 2574
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 703 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 761
Query: 147 LQSLL--VKDLELAEYLDVG----VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE D ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 762 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 816
>gi|363733106|ref|XP_001234486.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Gallus
gallus]
Length = 1001
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 357 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLL-NILMQLRKCCNHPYLFDGAE 415
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 416 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 456
>gi|449499854|ref|XP_002191591.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Taeniopygia
guttata]
Length = 1005
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 361 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLL-NILMQLRKCCNHPYLFDGAE 419
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 420 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 460
>gi|326918376|ref|XP_003205465.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Meleagris gallopavo]
Length = 1020
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 376 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLL-NILMQLRKCCNHPYLFDGAE 434
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 435 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 475
>gi|302915751|ref|XP_003051686.1| SNF2 family chromodomain-helicase DNA-binding protein [Nectria
haematococca mpVI 77-13-4]
gi|256732625|gb|EEU45973.1| SNF2 family chromodomain-helicase DNA-binding protein [Nectria
haematococca mpVI 77-13-4]
Length = 1557
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQL+ Y L +LC N L +I++ +K +HPY+ +
Sbjct: 689 EKIIRVELSDVQLDYYKNILTRNYTALCDA-TNGHKNSLLNIMMELKKISNHPYMFPGAE 747
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + + +SGK+ LLD +LS+LK G RV+I Q++
Sbjct: 748 EKVLAGSVRREDQIKGLIASSGKMMLLDQLLSKLKKDGHRVLIFSQMV 795
>gi|392340312|ref|XP_003754036.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Rattus
norvegicus]
Length = 2994
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1192 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1250
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L KD A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1251 EEKILEEFKDAHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1305
>gi|392347850|ref|XP_003749947.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Rattus
norvegicus]
Length = 2985
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1192 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1250
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L KD A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1251 EEKILEEFKDAHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1305
>gi|395501853|ref|XP_003755304.1| PREDICTED: lymphoid-specific helicase [Sarcophilus harrisii]
Length = 1049
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ L + ++ ++ E L V +SGK +LD ML ELKN+G
Sbjct: 771 LQNIMMLLRKCCNHPYLIEYPLDPV-TQEFQINEEL---VTSSGKFLILDRMLPELKNRG 826
Query: 186 SRVIILFQILII 197
+V++ Q+ ++
Sbjct: 827 HKVLLFSQMTMM 838
>gi|395334519|gb|EJF66895.1| hypothetical protein DICSQDRAFT_158547 [Dichomitus squalens
LYAD-421 SS1]
Length = 1586
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 14/134 (10%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSL----SLCSPLKNDPVGV-----LHDILISARKCCD 138
E +PV ++ +Q E Y ++LS++L SL P + G ++++L+ RKC
Sbjct: 851 EVIVPVSMAPLQKEIY-RSILSQNLDILRSLTEPNASSSKGNVTKTNMNNMLMQLRKCVQ 909
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILIIR 198
HPYLV +++ + E E L + AS KL+LL TML +L+ +G RV +LF I
Sbjct: 910 HPYLVSPNIEPKGLSPTETHERL---IGASAKLRLLKTMLPKLRARGHRV-LLFSQFAIA 965
Query: 199 AKVCENEILGYCIS 212
+ E+ ++G I+
Sbjct: 966 LDIIEDFLVGEGIT 979
>gi|351697662|gb|EHB00581.1| Putative global transcription activator SNF2L1, partial
[Heterocephalus glaber]
Length = 996
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 354 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 412
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +LS LK QGSRV+I Q+
Sbjct: 413 PG---PPYTTDEHI---VSNSGKMVVLDKLLSRLKEQGSRVLIFSQM 453
>gi|310793696|gb|EFQ29157.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001]
Length = 1569
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
Query: 63 NLGSLKEKTSKYVAYGGKLDSSRFV----EYWIPVQISNVQLEQYCGTLLSKSLSLCSPL 118
NL L + +Y K +F+ + +PV +S +Q E+ C ++++KS L +
Sbjct: 1033 NLPELHSRIKQYFLRRTKAQVLKFLPPMAQIIVPVSMSILQ-EKLCKSIIAKSPDLIKAI 1091
Query: 119 KNDP------VGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQ 172
D G L++IL+ RKC HP++ ++++ + +++ + L + ASGKL
Sbjct: 1092 FADDKINKRDRGSLNNILMQLRKCLCHPFMYSEAVEERSLDPVKIHQNL---ISASGKLM 1148
Query: 173 LLDTMLSELKNQGSRVIILFQIL 195
LL+ ML +LK +G RV+I Q L
Sbjct: 1149 LLNIMLPKLKERGHRVLIFSQFL 1171
>gi|348557269|ref|XP_003464442.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Cavia
porcellus]
Length = 2996
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|432115903|gb|ELK37046.1| Putative global transcription activator SNF2L1 [Myotis davidii]
Length = 954
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 334 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 392
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
E++ V SGK+ +LD +L++LK QGSRV+I Q++
Sbjct: 393 PG---PPYTTDEHI---VNNSGKMVVLDKLLAKLKEQGSRVLIFSQMI 434
>gi|11035016|gb|AAG01537.2|AF292095_1 imitation switch ISWI [Xenopus laevis]
Length = 1046
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 402 EIKIYVGLSKMQREWYTKILMKDIDILNSSGKTDKMRLL-NILMQLRKCCNHPYLFDGAE 460
Query: 148 QS-LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
DL LA SGK+ +LD +L +LK Q SR++I Q+
Sbjct: 461 PGPPYTTDLHLA-------TNSGKMMVLDKLLPKLKEQDSRILIFSQM 501
>gi|351713650|gb|EHB16569.1| Chromodomain-helicase-DNA-binding protein 7 [Heterocephalus glaber]
Length = 2988
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1201 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1259
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1260 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1314
>gi|395859802|ref|XP_003802219.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Otolemur
garnettii]
Length = 3071
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1276 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1334
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1335 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1389
>gi|291388024|ref|XP_002710542.1| PREDICTED: chromodomain helicase DNA binding protein 7 [Oryctolagus
cuniculus]
Length = 2997
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|297299473|ref|XP_002805403.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like, partial
[Macaca mulatta]
Length = 2990
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1232 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1290
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1291 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1345
>gi|426359736|ref|XP_004047121.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 2
[Gorilla gorilla gorilla]
Length = 2989
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|426359734|ref|XP_004047120.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 1
[Gorilla gorilla gorilla]
Length = 2997
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|403288790|ref|XP_003935570.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Saimiri
boliviensis boliviensis]
Length = 2996
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|402878334|ref|XP_003902847.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Papio anubis]
Length = 2977
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|397475364|ref|XP_003809109.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Pan paniscus]
Length = 2997
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|380814506|gb|AFE79127.1| chromodomain-helicase-DNA-binding protein 7 [Macaca mulatta]
Length = 2998
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|355779714|gb|EHH64190.1| Chromodomain-helicase-DNA-binding protein 7 [Macaca fascicularis]
Length = 2998
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|355697982|gb|EHH28530.1| Chromodomain-helicase-DNA-binding protein 7 [Macaca mulatta]
Length = 2998
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|332826148|ref|XP_519780.3| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Pan
troglodytes]
Length = 2997
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|297682946|ref|XP_002819164.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Pongo abelii]
Length = 2997
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|296226564|ref|XP_002758985.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 2
[Callithrix jacchus]
Length = 2994
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|119607236|gb|EAW86830.1| chromodomain helicase DNA binding protein 7, isoform CRA_a [Homo
sapiens]
gi|119607239|gb|EAW86833.1| chromodomain helicase DNA binding protein 7, isoform CRA_a [Homo
sapiens]
Length = 3011
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1218 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1276
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1277 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1331
>gi|119607237|gb|EAW86831.1| chromodomain helicase DNA binding protein 7, isoform CRA_b [Homo
sapiens]
Length = 2996
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|54112403|ref|NP_060250.2| chromodomain-helicase-DNA-binding protein 7 [Homo sapiens]
gi|148877246|sp|Q9P2D1.3|CHD7_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 7;
Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7
gi|119607240|gb|EAW86834.1| chromodomain helicase DNA binding protein 7, isoform CRA_d [Homo
sapiens]
gi|225000838|gb|AAI72443.1| Chromodomain helicase DNA binding protein 7 [synthetic construct]
Length = 2997
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|124487249|ref|NP_001074886.1| chromodomain-helicase-DNA-binding protein 7 [Mus musculus]
gi|148877247|sp|A2AJK6.1|CHD7_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 7;
Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7
Length = 2986
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1193 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1251
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1252 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1306
>gi|148673732|gb|EDL05679.1| mCG20155 [Mus musculus]
Length = 2985
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1193 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1251
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1252 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1306
>gi|47211143|emb|CAF96563.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1919
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L +K G L +I++ +KCC+H YLV
Sbjct: 712 VEQILRVEMSAIQKQYYKWILTRNYKALSKGVKGSTSGFL-NIMMELKKCCNHCYLVRPP 770
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
+ DL +E L V++SGKL LLD +L LK +G RV+I Q++ +
Sbjct: 771 EE-----DLNKSEALQQLVRSSGKLVLLDKLLIRLKERGHRVLIFSQMVRM 816
>gi|348552948|ref|XP_003462289.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription
activator SNF2L1-like [Cavia porcellus]
Length = 1048
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 418 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 476
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L+ LK+QGSRV+I Q+
Sbjct: 477 PG---PPYTTDEHI---VSNSGKMVVLDKLLARLKDQGSRVLIFSQM 517
>gi|340520248|gb|EGR50485.1| predicted protein [Trichoderma reesei QM6a]
Length = 1657
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 48 GDVHRKDDL----MVDAIDNLGSLKEKTSKYVAYGGK----LDSSRFVEYWIPVQISNVQ 99
G V +DL DA + L L + Y+ K D E I V++S+VQ
Sbjct: 650 GKVSIDEDLDSLSAADAQEKLQELHRSIAPYILRRTKETVESDLPPKTEKIIRVELSDVQ 709
Query: 100 LEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAE 159
LE Y L +LC N L +I++ +K +HPY+ + + +L +
Sbjct: 710 LEYYKNILTRNYAALCDA-TNGHKNSLLNIMMELKKVSNHPYMFPGAEERVLAGSTRRED 768
Query: 160 YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + +SGK+ L+D +LS+LK G RV+I Q++
Sbjct: 769 QIKGLIASSGKMMLIDQLLSKLKKDGHRVLIFSQMV 804
>gi|441647726|ref|XP_004090826.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 2
[Nomascus leucogenys]
Length = 2989
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETVIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|332213902|ref|XP_003256069.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 1
[Nomascus leucogenys]
Length = 2997
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETVIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ AE L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|351705244|gb|EHB08163.1| Chromodomain-helicase-DNA-binding protein 8 [Heterocephalus glaber]
Length = 2455
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 911 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 969
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E + +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 970 EEKILTEFREASHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1024
>gi|327273932|ref|XP_003221733.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like [Anolis
carolinensis]
Length = 1036
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 392 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLL-NILMQLRKCCNHPYLFDGAE 450
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSR++I Q+
Sbjct: 451 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRILIFSQM 491
>gi|195116617|ref|XP_002002850.1| GI10771 [Drosophila mojavensis]
gi|193913425|gb|EDW12292.1| GI10771 [Drosophila mojavensis]
Length = 1908
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 770 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPS 828
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L L+ E L V +K SGKL LLD +L LK G RV+I Q++
Sbjct: 829 EFELF--GLQQDEALQVLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 875
>gi|348577591|ref|XP_003474567.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 8-like [Cavia porcellus]
Length = 2582
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E + +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREASHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|241999570|ref|XP_002434428.1| conserved hypothetical protein [Ixodes scapularis]
gi|215497758|gb|EEC07252.1| conserved hypothetical protein [Ixodes scapularis]
Length = 3286
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 17/119 (14%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGV----LHDILISARKCCDHPYLV 143
E + V+++N+Q ++Y +L ++ + L +G L + ++ RKCC HPYL+
Sbjct: 1148 ETIVEVELTNIQ-KKYYRAILERNFAF---LTKGGIGTNVPNLMNTMMELRKCCIHPYLI 1203
Query: 144 DKSLQSLLVK-------DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + +L + LELA L+ V+ASGKL LLD +L LK+ G RV++ Q++
Sbjct: 1204 KGAEEQILQEYRLQHGESLELA--LNALVQASGKLVLLDKLLPRLKDGGHRVLVFSQMV 1260
>gi|426201092|gb|EKV51015.1| hypothetical protein AGABI2DRAFT_196645 [Agaricus bisporus var.
bisporus H97]
Length = 1741
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH-----DILISARKCCDHPYLVDK 145
+PV ++ +Q E +++S +++L S L + +G H +IL+ RKC HPYL +
Sbjct: 1071 VPVSMTPLQKE-VVRSIMSHNINLLSGLAQNNIGSSHKGKLNNILMHVRKCLQHPYLYSE 1129
Query: 146 SLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILIIRAKVCENE 205
++ + + E L + ASGKL+LL ++L +LK +G RV +LF ++ V E+
Sbjct: 1130 DIEPKGLDPKGIHEKL---IDASGKLRLLRSLLPKLKERGHRV-LLFSQFVLALNVIEDF 1185
Query: 206 ILG 208
+ G
Sbjct: 1186 LAG 1188
>gi|409083849|gb|EKM84206.1| hypothetical protein AGABI1DRAFT_117637 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1752
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH-----DILISARKCCDHPYLVDK 145
+PV ++ +Q E +++S +++L S L + +G H +IL+ RKC HPYL +
Sbjct: 1076 VPVSMTPLQKE-VVRSIMSHNINLLSGLAQNNIGSSHKGKLNNILMHVRKCLQHPYLYSE 1134
Query: 146 SLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILIIRAKVCENE 205
++ + + E L + ASGKL+LL ++L +LK +G RV +LF ++ V E+
Sbjct: 1135 DIEPKGLDPKGIHEKL---IDASGKLRLLRSLLPKLKERGHRV-LLFSQFVLALNVIEDF 1190
Query: 206 ILG 208
+ G
Sbjct: 1191 LAG 1193
>gi|297674406|ref|XP_002815220.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like,
partial [Pongo abelii]
Length = 816
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 IYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAEPGP 470
Query: 151 -LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 471 PYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQM 508
>gi|292496|gb|AAA80559.1| transcription activator [Homo sapiens]
Length = 976
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 334 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 392
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 393 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 433
>gi|403279221|ref|XP_003931158.1| PREDICTED: probable global transcription activator SNF2L1 [Saimiri
boliviensis boliviensis]
Length = 976
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 334 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 392
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 393 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 433
>gi|281351280|gb|EFB26864.1| hypothetical protein PANDA_007143 [Ailuropoda melanoleuca]
Length = 967
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 325 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 383
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 384 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 424
>gi|260834763|ref|XP_002612379.1| hypothetical protein BRAFLDRAFT_218963 [Branchiostoma floridae]
gi|229297756|gb|EEN68388.1| hypothetical protein BRAFLDRAFT_218963 [Branchiostoma floridae]
Length = 1849
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 66/114 (57%), Gaps = 12/114 (10%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSL----CSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
I V+++N+Q ++Y +L ++ + C N P L + ++ RKCC+HPYL++ +
Sbjct: 384 IEVELTNIQ-KKYYRAILERNFTFLAKGCGSSSNVPN--LMNTMMELRKCCNHPYLINGA 440
Query: 147 LQSLL--VKDL---ELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L KD +YL V+ASGKL L+D +L +L+ G +V+I Q++
Sbjct: 441 EEKILGEYKDQHGENHGKYLHCMVQASGKLVLIDKLLPKLRAGGHKVLIFSQMV 494
>gi|410989349|ref|XP_004000924.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Felis catus]
Length = 976
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 334 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 392
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 393 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 433
>gi|355757682|gb|EHH61207.1| Putative global transcription activator SNF2L1, partial [Macaca
fascicularis]
Length = 995
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 353 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 411
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 412 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 452
>gi|291408171|ref|XP_002720328.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a1-like isoform 3 [Oryctolagus
cuniculus]
Length = 1049
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 419 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 477
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 478 PG---PPYTTDEHI---VNNSGKMLVLDKLLAKLKEQGSRVLIFSQM 518
>gi|355705138|gb|EHH31063.1| Putative global transcription activator SNF2L1, partial [Macaca
mulatta]
Length = 996
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 354 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 412
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 413 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 453
>gi|258570209|ref|XP_002543908.1| CHD1 protein [Uncinocarpus reesii 1704]
gi|237904178|gb|EEP78579.1| CHD1 protein [Uncinocarpus reesii 1704]
Length = 1358
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 690 EKIIRVELSDVQLEYYKNILTKNYAALNQGSKGQKQSLL-NIMMELKKASNHPFMFANAE 748
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + L + +SGK+ LLD +L++LKN G RV+I Q++
Sbjct: 749 ERILQGSTRREDALRALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMV 796
>gi|401408363|ref|XP_003883630.1| hypothetical protein NCLIV_033850 [Neospora caninum Liverpool]
gi|325118047|emb|CBZ53598.1| hypothetical protein NCLIV_033850 [Neospora caninum Liverpool]
Length = 1613
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 11/126 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E +I V +S +Q + Y +LSK++ + + + +L +IL+ RKCC+HPYL D
Sbjct: 449 EIYIFVGMSKLQKKLY-ADILSKNVEVLNAMSGSKTQML-NILMQLRKCCNHPYLFDGVE 506
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCEN 204
+ E++ V+A+GK+ LLD +L LK +GSRV++ Q +L I C
Sbjct: 507 PGPPYVE---GEHM---VEAAGKMALLDKLLPRLKAEGSRVLLFSQMTRLLDIVDDYCRW 560
Query: 205 EILGYC 210
YC
Sbjct: 561 RGFDYC 566
>gi|221508955|gb|EEE34524.1| chromatin remodelling complex protein SNF2L, putative [Toxoplasma
gondii VEG]
Length = 1551
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 11/126 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E +I V +S +Q + Y +LSK++ + + + +L +IL+ RKCC+HPYL D
Sbjct: 432 EIYIFVGMSKLQKKLY-ADILSKNVEVLNAMSGSKTQML-NILMQLRKCCNHPYLFDGVE 489
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCEN 204
+ E++ V+A+GK+ LLD +L LK +GSRV++ Q +L I C
Sbjct: 490 PGPPYVE---GEHM---VEAAGKMALLDKLLPRLKAEGSRVLLFSQMTRLLDIVDDYCRW 543
Query: 205 EILGYC 210
YC
Sbjct: 544 RGFDYC 549
>gi|221488451|gb|EEE26665.1| chromatin remodelling complex protein SNF2L, putative [Toxoplasma
gondii GT1]
Length = 1556
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 11/126 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E +I V +S +Q + Y +LSK++ + + + +L +IL+ RKCC+HPYL D
Sbjct: 432 EIYIFVGMSKLQKKLY-ADILSKNVEVLNAMSGSKTQML-NILMQLRKCCNHPYLFDGVE 489
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCEN 204
+ E++ V+A+GK+ LLD +L LK +GSRV++ Q +L I C
Sbjct: 490 PGPPYVE---GEHM---VEAAGKMALLDKLLPRLKAEGSRVLLFSQMTRLLDIVDDYCRW 543
Query: 205 EILGYC 210
YC
Sbjct: 544 RGFDYC 549
>gi|237833381|ref|XP_002365988.1| chromatin remodeling complex protein SNF2L, putative [Toxoplasma
gondii ME49]
gi|211963652|gb|EEA98847.1| chromatin remodeling complex protein SNF2L, putative [Toxoplasma
gondii ME49]
Length = 1556
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 11/126 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E +I V +S +Q + Y +LSK++ + + + +L +IL+ RKCC+HPYL D
Sbjct: 432 EIYIFVGMSKLQKKLY-ADILSKNVEVLNAMSGSKTQML-NILMQLRKCCNHPYLFDGVE 489
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCEN 204
+ E++ V+A+GK+ LLD +L LK +GSRV++ Q +L I C
Sbjct: 490 PGPPYVE---GEHM---VEAAGKMALLDKLLPRLKAEGSRVLLFSQMTRLLDIVDDYCRW 543
Query: 205 EILGYC 210
YC
Sbjct: 544 RGFDYC 549
>gi|326427315|gb|EGD72885.1| hypothetical protein PTSG_12193 [Salpingoeca sp. ATCC 50818]
Length = 2049
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 7/107 (6%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE +P ++S++Q + Y L K+ ++ + K+ L +L + RKC +HPYL + +
Sbjct: 1334 VEVMVPCEMSHLQKQLY-KHALEKNYTVLTNAKSKKG--LKSLLTNLRKCSNHPYLFEGT 1390
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
D E ++ VKASGKL L+D ML++LK G RV+I Q
Sbjct: 1391 EPEFPTLD----ETMERLVKASGKLLLMDKMLTKLKASGHRVLIFSQ 1433
>gi|291408169|ref|XP_002720327.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a1-like isoform 2 [Oryctolagus
cuniculus]
Length = 1041
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 411 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 469
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 470 PG---PPYTTDEHI---VNNSGKMLVLDKLLAKLKEQGSRVLIFSQM 510
>gi|452821607|gb|EME28635.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 1026
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Query: 94 QISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVK 153
++S+VQL+ Y LL K + + D V +L +IL+ RKCC+HPYL D V+
Sbjct: 379 KLSSVQLDIY-RNLLKKDIDAINGPGGDRVRLL-NILMQLRKCCNHPYLFDG------VE 430
Query: 154 DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D L + + +++ GKL LLD +LS L+ +V+I Q+
Sbjct: 431 DRSLDPFGEHVIESCGKLMLLDKLLSRLRRGNHKVLIFSQM 471
>gi|334350211|ref|XP_001373609.2| PREDICTED: probable global transcription activator SNF2L1
[Monodelphis domestica]
Length = 1153
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 398 EVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 456
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D L V SGK+ LD +LS+LK QGSRV+I Q+
Sbjct: 457 PGPPYTTDTHL-------VNNSGKMVALDKLLSKLKEQGSRVLIFSQM 497
>gi|345306756|ref|XP_001509678.2| PREDICTED: probable global transcription activator SNF2L1-like
[Ornithorhynchus anatinus]
Length = 1011
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 365 EVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 423
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D L V SGK+ LD +LS+LK QGSRV+I Q+
Sbjct: 424 PGPPYTTDTHL-------VNNSGKMVALDKLLSKLKEQGSRVLIFSQM 464
>gi|400602704|gb|EJP70306.1| SNF2 family chromodomain-helicase DNA-binding protein [Beauveria
bassiana ARSEF 2860]
Length = 1674
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 58 VDAIDNLGSLKEKTSKYVAYGGK----LDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLS 113
VDA + L L + Y+ K D E I V++S+VQL+ Y +L+++ +
Sbjct: 669 VDAQEKLQELHSAIAPYILRRTKETVESDLPPKTEKIIRVELSDVQLDYY-KNILTRNYA 727
Query: 114 LCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQL 173
S + L +I++ +K +HPY+ + + +L + + + + +SGK+ L
Sbjct: 728 ALSDASSGHKNSLLNIMMELKKISNHPYMFPGAEERVLAGSIRREDQIKGLITSSGKMML 787
Query: 174 LDTMLSELKNQGSRVIILFQIL 195
LD +LS+LK G RV+I Q++
Sbjct: 788 LDQLLSKLKKDGHRVLIFSQMV 809
>gi|19074741|ref|NP_586247.1| similarity to THE ATPase COMPONENT OF THE TWO-SUBUNIT CHROMATIN
REMODELING FACTOR [Encephalitozoon cuniculi GB-M1]
gi|19069383|emb|CAD25851.1| similarity to THE ATPase COMPONENT OF THE TWO-SUBUNIT CHROMATIN
REMODELING FACTOR [Encephalitozoon cuniculi GB-M1]
Length = 823
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 94 QISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVK 153
++S +Q E Y LL + LS + DP G+L ++++ RKCC+HPYL +
Sbjct: 286 KLSPMQREWY-RMLLKRDLSPLGSTR-DPKGMLMNVVMQLRKCCNHPYLFPDAEPKPYTN 343
Query: 154 DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
D + E SGK+ +LD +L+ LK +GSRV+I Q+ ++
Sbjct: 344 DKHIIE-------NSGKMIVLDKLLASLKAKGSRVLIFSQMSMM 380
>gi|291408167|ref|XP_002720326.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a1-like isoform 1 [Oryctolagus
cuniculus]
Length = 1053
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 411 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 469
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 470 PG---PPYTTDEHI---VNNSGKMLVLDKLLAKLKEQGSRVLIFSQM 510
>gi|126273212|ref|XP_001374884.1| PREDICTED: lymphoid-specific helicase [Monodelphis domestica]
Length = 824
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 112 LSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKL 171
+ + P++++ L +I++ RKCC+HPYL++ L + ++ ++ E L V +SGK
Sbjct: 532 VEMSIPIESEVNLKLQNIMMLLRKCCNHPYLIEYPLDPV-TQEFQINEEL---VTSSGKF 587
Query: 172 QLLDTMLSELKNQGSRVIILFQILII 197
+LD ML ELKN+G +V++ Q+ ++
Sbjct: 588 LILDRMLPELKNRGHKVLLFSQMTMM 613
>gi|449329864|gb|AGE96132.1| atpase component of the two-subunit chromatin remodeling factor
[Encephalitozoon cuniculi]
Length = 823
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 94 QISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVK 153
++S +Q E Y LL + LS + DP G+L ++++ RKCC+HPYL +
Sbjct: 286 KLSPMQREWY-RMLLKRDLSPLGSTR-DPKGMLMNVVMQLRKCCNHPYLFPDAEPKPYTN 343
Query: 154 DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
D + E SGK+ +LD +L+ LK +GSRV+I Q+ ++
Sbjct: 344 DKHIIE-------NSGKMIVLDKLLASLKAKGSRVLIFSQMSMM 380
>gi|426257617|ref|XP_004022422.1| PREDICTED: probable global transcription activator SNF2L1 [Ovis
aries]
Length = 976
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 334 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 392
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 393 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 433
>gi|344237732|gb|EGV93835.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Cricetulus griseus]
Length = 1166
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 562 IYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAEPGP 620
Query: 151 -LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCENEI 206
D+ L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 621 PYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRN 673
Query: 207 LGYC 210
YC
Sbjct: 674 YEYC 677
>gi|335306514|ref|XP_003360490.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Sus scrofa]
Length = 1045
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>gi|440894888|gb|ELR47213.1| Putative global transcription activator SNF2L1, partial [Bos
grunniens mutus]
Length = 996
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 354 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 412
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 413 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 453
>gi|410304366|gb|JAA30783.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1053
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|410304364|gb|JAA30782.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1041
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|380815784|gb|AFE79766.1| putative global transcription activator SNF2L1 isoform a [Macaca
mulatta]
gi|384948908|gb|AFI38059.1| putative global transcription activator SNF2L1 isoform a [Macaca
mulatta]
gi|410340059|gb|JAA38976.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1048
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|355720681|gb|AES07011.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Mustela putorius furo]
Length = 1032
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 398 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 456
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 457 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 497
>gi|338729558|ref|XP_003365923.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Equus caballus]
Length = 1045
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>gi|335306517|ref|XP_003360491.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Sus scrofa]
Length = 1057
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>gi|332226354|ref|XP_003262354.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription
activator SNF2L1 [Nomascus leucogenys]
Length = 1059
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 413 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 471
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 472 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 512
>gi|301766464|ref|XP_002918637.1| PREDICTED: probable global transcription activator SNF2L1-like
isoform 2 [Ailuropoda melanoleuca]
Length = 1042
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|301766462|ref|XP_002918636.1| PREDICTED: probable global transcription activator SNF2L1-like
isoform 1 [Ailuropoda melanoleuca]
Length = 1054
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|296471282|tpg|DAA13397.1| TPA: SWI/SNF related, matrix associated, actin dependent regulator
of chromatin, subfamily a, member 1 [Bos taurus]
Length = 1057
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>gi|211828096|gb|AAH51825.2| SMARCA1 protein [Homo sapiens]
Length = 965
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 349 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 407
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 408 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 448
>gi|380815786|gb|AFE79767.1| putative global transcription activator SNF2L1 isoform b [Macaca
mulatta]
gi|410340063|gb|JAA38978.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1036
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|149745541|ref|XP_001500568.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Equus caballus]
Length = 1057
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>gi|119632238|gb|EAX11833.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_a [Homo
sapiens]
Length = 946
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 334 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 392
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 393 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 433
>gi|164419749|ref|NP_620604.2| probable global transcription activator SNF2L1 isoform b [Homo
sapiens]
gi|397496286|ref|XP_003818972.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Pan paniscus]
gi|402911364|ref|XP_003918303.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Papio anubis]
gi|384948912|gb|AFI38061.1| putative global transcription activator SNF2L1 isoform b [Macaca
mulatta]
gi|387540730|gb|AFJ70992.1| putative global transcription activator SNF2L1 isoform b [Macaca
mulatta]
gi|410221928|gb|JAA08183.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
gi|410253106|gb|JAA14520.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1042
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|21071044|ref|NP_003060.2| probable global transcription activator SNF2L1 isoform a [Homo
sapiens]
gi|397496290|ref|XP_003818974.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Pan paniscus]
gi|402911366|ref|XP_003918304.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Papio anubis]
gi|115311627|sp|P28370.2|SMCA1_HUMAN RecName: Full=Probable global transcription activator SNF2L1;
AltName: Full=ATP-dependent helicase SMARCA1; AltName:
Full=Nucleosome-remodeling factor subunit SNF2L;
AltName: Full=SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 1
gi|109658918|gb|AAI17448.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Homo sapiens]
gi|119632240|gb|EAX11835.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_c [Homo
sapiens]
gi|384948910|gb|AFI38060.1| putative global transcription activator SNF2L1 isoform a [Macaca
mulatta]
gi|387540732|gb|AFJ70993.1| putative global transcription activator SNF2L1 isoform a [Macaca
mulatta]
gi|410221930|gb|JAA08184.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
gi|410253108|gb|JAA14521.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
gi|410340065|gb|JAA38979.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1054
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|197101878|ref|NP_001127206.1| probable global transcription activator SNF2L1 [Pongo abelii]
gi|55726189|emb|CAH89868.1| hypothetical protein [Pongo abelii]
Length = 849
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 203 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 261
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 262 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 302
>gi|410989351|ref|XP_004000925.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Felis catus]
Length = 1061
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>gi|335306519|ref|XP_003360492.1| PREDICTED: probable global transcription activator SNF2L1 isoform 4
[Sus scrofa]
Length = 1061
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>gi|311276917|ref|XP_003135410.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Sus scrofa]
Length = 1073
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>gi|296236368|ref|XP_002807959.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription
activator SNF2L1-like [Callithrix jacchus]
Length = 1080
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|119632239|gb|EAX11834.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_b [Homo
sapiens]
Length = 1029
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 383 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 441
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 442 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 482
>gi|410989353|ref|XP_004000926.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Felis catus]
Length = 1069
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 411 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 469
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 470 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 510
>gi|297304754|ref|XP_002806437.1| PREDICTED: probable global transcription activator SNF2L1-like
[Macaca mulatta]
gi|397496288|ref|XP_003818973.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Pan paniscus]
gi|402911362|ref|XP_003918302.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Papio anubis]
gi|119632241|gb|EAX11836.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_d [Homo
sapiens]
gi|219520696|gb|AAI43955.1| SMARCA1 protein [Homo sapiens]
gi|410340061|gb|JAA38977.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1070
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|407926482|gb|EKG19449.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 1597
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S++QLE Y +L+++ + + P L +I++ +K +HPY+ +
Sbjct: 686 EKIIRVELSDLQLEYY-KNILTRNYAALNQNGKGPKQSLLNIMMELKKASNHPYMFPGAE 744
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E L V +SGK+ LLD +L++LK RV++ Q++
Sbjct: 745 ERMLAGNYRREEQLKALVTSSGKMMLLDRLLTKLKKDNHRVLVFSQMV 792
>gi|330864739|ref|NP_001178471.1| probable global transcription activator SNF2L1 [Bos taurus]
Length = 1051
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 415 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 473
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 474 PG---PPYTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 514
>gi|395848675|ref|XP_003796974.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Otolemur garnettii]
Length = 1054
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 EVKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VTNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|395848673|ref|XP_003796973.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Otolemur garnettii]
Length = 1042
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 EVKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VTNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|303324465|ref|XP_003072220.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111930|gb|EER30075.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320037260|gb|EFW19198.1| chromodomain helicase hrp1 [Coccidioides posadasii str. Silveira]
Length = 1520
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 696 EKIIRVELSDVQLEYYKNILTKNYAALNQGAKGQKQSLL-NIMMELKKASNHPFMFANAE 754
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LKN G RV+I Q++
Sbjct: 755 DRILQGSTRREDALRALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMV 802
>gi|190352249|gb|ACE76520.1| SNF2H-like protein [Sus scrofa]
Length = 239
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 52 IYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAEPGP 110
Query: 151 -LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCENEI 206
D+ L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 111 PYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRN 163
Query: 207 LGYC 210
YC
Sbjct: 164 YEYC 167
>gi|119173796|ref|XP_001239291.1| hypothetical protein CIMG_10313 [Coccidioides immitis RS]
gi|392869498|gb|EJB11843.1| chromodomain helicase [Coccidioides immitis RS]
Length = 1520
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 696 EKIIRVELSDVQLEYYKNILTKNYAALNQGAKGQKQSLL-NIMMELKKASNHPFMFANAE 754
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LKN G RV+I Q++
Sbjct: 755 DRILQGSTRREDALRALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMV 802
>gi|395848677|ref|XP_003796975.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Otolemur garnettii]
Length = 1070
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 412 EVKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 470
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 471 PG---PPYTTDEHI---VTNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|440633226|gb|ELR03145.1| hypothetical protein GMDG_05974 [Geomyces destructans 20631-21]
Length = 1586
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLC--------SPLKNDPVGVLHDILISARKCCDHPYL 142
IPV +S VQ + Y ++LSKS L + LK G L++IL+ RKC HP++
Sbjct: 1010 IPVTMSTVQKKLY-KSILSKSPELLRSIFGKDQAQLKPSERGSLNNILMQLRKCVCHPFV 1068
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++++ L L V AS KLQLL+ ML +L+ +G RV+I Q L
Sbjct: 1069 YSEAIEERSNNRAVLHRNL---VDASSKLQLLEIMLQKLQERGHRVLIFSQFL 1118
>gi|355678742|gb|AER96201.1| chromodomain helicase DNA binding protein 8 [Mustela putorius furo]
Length = 840
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ + +
Sbjct: 648 IEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEK 706
Query: 150 LLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 707 ILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 758
>gi|432090336|gb|ELK23764.1| Chromodomain-helicase-DNA-binding protein 8 [Myotis davidii]
Length = 2070
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ + +
Sbjct: 592 IEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEK 650
Query: 150 LLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 651 ILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 702
>gi|63991035|gb|AAY40920.1| unknown [Homo sapiens]
Length = 367
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 145 IYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAEPGP 203
Query: 151 -LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCENEI 206
D+ L V SGK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 204 PYTTDMHL-------VTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRN 256
Query: 207 LGYC 210
YC
Sbjct: 257 YEYC 260
>gi|327277378|ref|XP_003223442.1| PREDICTED: probable global transcription activator SNF2L1-like
[Anolis carolinensis]
Length = 1049
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 403 EVKIYLGLSKMQREWYTKILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 461
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D L V SGK+ LD +LS+LK QGSRV++ Q+
Sbjct: 462 PGPPYTTDTHL-------VTNSGKMVALDKLLSKLKEQGSRVLVFSQM 502
>gi|195435393|ref|XP_002065676.1| GK15574 [Drosophila willistoni]
gi|194161761|gb|EDW76662.1| GK15574 [Drosophila willistoni]
Length = 1941
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 779 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPS 837
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L+ L+ E L +K SGKL LLD +L LK G RV+I Q++
Sbjct: 838 EFELM--GLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 884
>gi|194760843|ref|XP_001962642.1| GF14337 [Drosophila ananassae]
gi|190616339|gb|EDV31863.1| GF14337 [Drosophila ananassae]
Length = 1891
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 755 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPS 813
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L+ L+ E L +K SGKL LLD +L LK G RV+I Q++
Sbjct: 814 EFELM--GLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 860
>gi|428181767|gb|EKX50630.1| hypothetical protein GUITHDRAFT_103852 [Guillardia theta CCMP2712]
Length = 703
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 9/76 (11%)
Query: 121 DPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYL--DVGVKASGKLQLLDTML 178
+P L ++++ RKCC+HPYL + E E++ + ++ASGK+QLLD ML
Sbjct: 428 NPQSSLENMMMQMRKCCNHPYLFASPID-------EHGEFVVDERVLEASGKMQLLDRML 480
Query: 179 SELKNQGSRVIILFQI 194
LK G++V+I FQ+
Sbjct: 481 RILKENGNKVLIFFQM 496
>gi|195470933|ref|XP_002087761.1| GE14968 [Drosophila yakuba]
gi|194173862|gb|EDW87473.1| GE14968 [Drosophila yakuba]
Length = 1883
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 756 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPS 814
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L+ L+ E L +K SGKL LLD +L LK G RV+I Q++
Sbjct: 815 EFELM--GLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 861
>gi|195161920|ref|XP_002021804.1| GL26702 [Drosophila persimilis]
gi|194103604|gb|EDW25647.1| GL26702 [Drosophila persimilis]
Length = 1943
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 790 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKKGSTSTFLNIVIELKKCCNHAALIRPS 848
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L+ L+ E L +K SGKL LLD +L LK G RV+I Q++
Sbjct: 849 EFELM--GLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 895
>gi|378729701|gb|EHY56160.1| chromodomain-helicase-DNA-binding protein 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 1563
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S++QLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 690 EKIIRVELSDIQLEYYKNILTKNYAALNQGAKGQKQSLL-NIMMELKKASNHPFMFPSAE 748
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ L+ + E L V +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 749 ERLVPEGARRDEVLRALVTSSGKMMLLDQLLTKLKRDGHRVLIFSQMV 796
>gi|194855230|ref|XP_001968500.1| GG24470 [Drosophila erecta]
gi|190660367|gb|EDV57559.1| GG24470 [Drosophila erecta]
Length = 1886
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 757 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPS 815
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L+ L+ E L +K SGKL LLD +L LK G RV+I Q++
Sbjct: 816 EFELM--GLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 862
>gi|442625623|ref|NP_001259975.1| Chromodomain-helicase-DNA-binding protein 1, isoform C [Drosophila
melanogaster]
gi|440213244|gb|AGB92512.1| Chromodomain-helicase-DNA-binding protein 1, isoform C [Drosophila
melanogaster]
Length = 1881
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 757 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPS 815
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L+ L+ E L +K SGKL LLD +L LK G RV+I Q++
Sbjct: 816 EFELM--GLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 862
>gi|1448983|gb|AAC37264.1| chromodomain-helicase-DNA-binding protein [Drosophila melanogaster]
Length = 1883
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 757 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPS 815
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L+ L+ E L +K SGKL LLD +L LK G RV+I Q++
Sbjct: 816 EFELM--GLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 862
>gi|17137266|ref|NP_477197.1| Chromodomain-helicase-DNA-binding protein 1, isoform A [Drosophila
melanogaster]
gi|75009913|sp|Q7KU24.1|CHD1_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein 1;
Short=CHD-1; AltName: Full=ATP-dependent helicase Chd1
gi|7295870|gb|AAF51170.1| Chromodomain-helicase-DNA-binding protein 1, isoform A [Drosophila
melanogaster]
Length = 1883
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 757 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPS 815
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L+ L+ E L +K SGKL LLD +L LK G RV+I Q++
Sbjct: 816 EFELM--GLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 862
>gi|34526499|dbj|BAC85127.1| FLJ00266 protein [Homo sapiens]
Length = 1544
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 9 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 67
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 68 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 122
>gi|386769008|ref|NP_001245851.1| Chromodomain-helicase-DNA-binding protein 1, isoform B [Drosophila
melanogaster]
gi|383291295|gb|AFH03528.1| Chromodomain-helicase-DNA-binding protein 1, isoform B [Drosophila
melanogaster]
Length = 1900
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 774 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPS 832
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L+ L+ E L +K SGKL LLD +L LK G RV+I Q++
Sbjct: 833 EFELM--GLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 879
>gi|198473015|ref|XP_001356144.2| GA17649 [Drosophila pseudoobscura pseudoobscura]
gi|198139261|gb|EAL33204.2| GA17649 [Drosophila pseudoobscura pseudoobscura]
Length = 1943
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 790 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKKGSTSTFLNIVIELKKCCNHAALIRPS 848
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L+ L+ E L +K SGKL LLD +L LK G RV+I Q++
Sbjct: 849 EFELM--GLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 895
>gi|296214427|ref|XP_002753817.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
[Callithrix jacchus]
Length = 2304
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 767 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 825
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 826 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 880
>gi|195496271|ref|XP_002095622.1| GE19602 [Drosophila yakuba]
gi|194181723|gb|EDW95334.1| GE19602 [Drosophila yakuba]
Length = 899
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E+ + V++S++Q +++ +L+K+ + V L +I++ RKCC+HPYL +
Sbjct: 507 AEFIVRVELSSMQ-KKFYKLILTKNFKALNKNGGGRVCSLLNIMMDLRKCCNHPYLFSSA 565
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + L E ++ +KASGKL LL ML +LK RV+I Q+
Sbjct: 566 AEEATILPSGLYE-INSLIKASGKLDLLSKMLKQLKADHHRVLIFSQM 612
>gi|197251949|ref|NP_075222.2| chromodomain-helicase-DNA-binding protein 8 [Rattus norvegicus]
gi|226706290|sp|Q9JIX5.2|CHD8_RAT RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8;
AltName: Full=Axis duplication inhibitor; Short=Duplin
gi|149033674|gb|EDL88472.1| chromodomain helicase DNA binding protein 8, isoform CRA_a [Rattus
norvegicus]
Length = 2581
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L++ E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|328802689|ref|NP_001179063.1| chromodomain-helicase-DNA-binding protein 8 [Bos taurus]
Length = 2303
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 767 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 825
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 826 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 880
>gi|344252331|gb|EGW08435.1| Chromodomain-helicase-DNA-binding protein 8 [Cricetulus griseus]
Length = 2587
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L++ E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|403264249|ref|XP_003924402.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
[Saimiri boliviensis boliviensis]
Length = 2302
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 767 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 825
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 826 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 880
>gi|354491203|ref|XP_003507745.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like
[Cricetulus griseus]
Length = 2579
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L++ E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|355778379|gb|EHH63415.1| hypothetical protein EGM_16381 [Macaca fascicularis]
Length = 2446
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 911 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 969
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 970 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1024
>gi|195398205|ref|XP_002057713.1| GJ18281 [Drosophila virilis]
gi|194141367|gb|EDW57786.1| GJ18281 [Drosophila virilis]
Length = 1924
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 782 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPS 840
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L L+ E L + +K SGKL LLD +L LK G RV+I Q++
Sbjct: 841 EFELF--GLQQDEALQMLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 887
>gi|119392064|ref|NP_963999.2| chromodomain-helicase-DNA-binding protein 8 [Mus musculus]
gi|123778258|sp|Q09XV5.1|CHD8_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8;
AltName: Full=Axis duplication inhibitor; Short=Duplin
gi|77744590|gb|ABB02259.1| chromodomain helicase DNA binding protein 8 [Mus musculus]
Length = 2582
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1048 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1106
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L++ E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1107 EEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1161
>gi|402875592|ref|XP_003901584.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
[Papio anubis]
Length = 2302
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 767 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 825
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 826 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 880
>gi|338717123|ref|XP_001918380.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Equus caballus]
Length = 2304
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 767 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 825
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 826 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 880
>gi|297297436|ref|XP_001096619.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Macaca
mulatta]
Length = 2301
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 767 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 825
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 826 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 880
>gi|148710305|gb|EDL42251.1| mCG18716, isoform CRA_b [Mus musculus]
Length = 2582
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1048 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1106
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L++ E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1107 EEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1161
>gi|303391164|ref|XP_003073812.1| SNF2 DNA/RNA helicase [Encephalitozoon intestinalis ATCC 50506]
gi|303302960|gb|ADM12452.1| SNF2 DNA/RNA helicase [Encephalitozoon intestinalis ATCC 50506]
Length = 823
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 94 QISNVQLEQYCGTLLSKSLSLCSPLKN--DPVGVLHDILISARKCCDHPYLVDKSLQSLL 151
++S +Q E Y LL + LS PL + DP G+L ++++ RKCC+HPYL +
Sbjct: 286 KLSPMQREWY-KMLLKRDLS---PLGSTRDPKGMLMNVVMQLRKCCNHPYLFPDAEPEPY 341
Query: 152 VKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D + E SGK+ +LD +L L+ +GSRV+I Q+
Sbjct: 342 TNDKHIIE-------NSGKMIVLDKLLESLRARGSRVLIFSQM 377
>gi|395502992|ref|XP_003755857.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Sarcophilus
harrisii]
Length = 2594
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1048 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1106
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1107 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1161
>gi|344305959|ref|XP_003421657.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Loxodonta
africana]
Length = 2581
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1045 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1103
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1104 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1158
>gi|114326455|ref|NP_065971.2| chromodomain-helicase-DNA-binding protein 8 isoform 2 [Homo
sapiens]
gi|225356486|gb|AAI56440.1| Chromodomain helicase DNA binding protein 8 [synthetic construct]
Length = 2302
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 767 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 825
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 826 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 880
>gi|226706292|sp|B0R0I6.2|CHD8_DANRE RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8
Length = 2511
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 67/116 (57%), Gaps = 9/116 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCS--PLKNDPVGVLHDILISARKCCDHPYLVDK 145
E I V++++VQ ++Y +L ++ S S +N V L + ++ RKCC+HPYL+
Sbjct: 1082 ETIIEVELTDVQ-KKYYRAILERNFSFLSMGATQNSNVPNLLNTMMELRKCCNHPYLITG 1140
Query: 146 SLQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + ++ + E+ + +L V+++GKL LLD +L LK G +V+I Q++
Sbjct: 1141 AEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMV 1196
>gi|51476360|emb|CAH18170.1| hypothetical protein [Homo sapiens]
Length = 2302
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 767 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 825
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 826 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 880
>gi|40215423|gb|AAR82736.1| SD21488p [Drosophila melanogaster]
Length = 1645
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 757 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPS 815
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L+ L+ E L +K SGKL LLD +L LK G RV+I Q++
Sbjct: 816 EFELM--GLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 862
>gi|431898743|gb|ELK07120.1| Chromodomain-helicase-DNA-binding protein 8 [Pteropus alecto]
Length = 2582
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|34328020|dbj|BAB13390.3| KIAA1564 protein [Homo sapiens]
Length = 2432
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 897 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 955
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 956 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1010
>gi|335286466|ref|XP_003355099.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 7 [Sus scrofa]
Length = 2983
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1196 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1254
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1255 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1309
>gi|441667219|ref|XP_003260841.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Nomascus
leucogenys]
Length = 2573
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|440902098|gb|ELR52941.1| Chromodomain-helicase-DNA-binding protein 8 [Bos grunniens mutus]
Length = 2448
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 911 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 969
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 970 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1024
>gi|403264247|ref|XP_003924401.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Saimiri boliviensis boliviensis]
Length = 2581
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|355678720|gb|AER96196.1| chromodomain helicase DNA binding protein 7 [Mustela putorius furo]
Length = 808
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ + +
Sbjct: 517 IEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEK 575
Query: 150 LL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 576 ILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 627
>gi|355693101|gb|EHH27704.1| hypothetical protein EGK_17972 [Macaca mulatta]
Length = 2446
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 911 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 969
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 970 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1024
>gi|332841817|ref|XP_001153522.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 3
[Pan troglodytes]
gi|426376292|ref|XP_004054938.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
[Gorilla gorilla gorilla]
gi|410338053|gb|JAA37973.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
Length = 2302
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 767 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 825
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 826 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 880
>gi|350586947|ref|XP_003482311.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8, partial [Sus
scrofa]
Length = 2567
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|320461545|ref|NP_001189381.1| chromodomain-helicase-DNA-binding protein 8 [Danio rerio]
Length = 2549
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 67/116 (57%), Gaps = 9/116 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCS--PLKNDPVGVLHDILISARKCCDHPYLVDK 145
E I V++++VQ ++Y +L ++ S S +N V L + ++ RKCC+HPYL+
Sbjct: 1120 ETIIEVELTDVQ-KKYYRAILERNFSFLSMGATQNSNVPNLLNTMMELRKCCNHPYLITG 1178
Query: 146 SLQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + ++ + E+ + +L V+++GKL LLD +L LK G +V+I Q++
Sbjct: 1179 AEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMV 1234
>gi|281340559|gb|EFB16143.1| hypothetical protein PANDA_017702 [Ailuropoda melanoleuca]
Length = 2448
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 911 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 969
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 970 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1024
>gi|402085894|gb|EJT80792.1| chromodomain helicase DNA binding protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 1690
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 12/112 (10%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLC------SPLKNDPVGVLHDILISARKCCDHPYLVD 144
+PV +S VQ E+ C ++++K+ L S + G L++IL+ RKC HP++
Sbjct: 1019 VPVSMSVVQ-EKLCKSIMAKNPQLIQAIFAKSKMSKTERGSLNNILMQLRKCLCHPFVYS 1077
Query: 145 KSLQSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+++ +DL+ A+ + G V+AS KL LL+ ML +LK G RV+I Q L
Sbjct: 1078 DAIED---RDLD-AKTMQTGLVEASSKLVLLNIMLPKLKENGHRVLIFSQFL 1125
>gi|402875590|ref|XP_003901583.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Papio anubis]
Length = 2581
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|383420319|gb|AFH33373.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Macaca
mulatta]
Length = 2581
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|444525654|gb|ELV14122.1| Chromodomain-helicase-DNA-binding protein 8 [Tupaia chinensis]
Length = 2589
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1114 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1172
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1173 EEKILTEFREACHVIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1227
>gi|395511095|ref|XP_003759797.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Sarcophilus
harrisii]
Length = 2999
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|345780979|ref|XP_532624.3| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Canis lupus familiaris]
Length = 2583
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|431891799|gb|ELK02333.1| Chromodomain-helicase-DNA-binding protein 7 [Pteropus alecto]
Length = 2982
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1197 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1255
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1256 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1310
>gi|426376290|ref|XP_004054937.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Gorilla gorilla gorilla]
Length = 2581
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|426236111|ref|XP_004012018.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 7 [Ovis aries]
Length = 2867
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1200 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1258
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1259 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1313
>gi|410987205|ref|XP_003999896.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Felis catus]
Length = 2974
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1202 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1260
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1261 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1315
>gi|410338051|gb|JAA37972.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
Length = 2589
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|397466069|ref|XP_003804795.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 8 [Pan paniscus]
Length = 2581
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|345306816|ref|XP_003428508.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 7-like [Ornithorhynchus anatinus]
Length = 2902
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1196 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1254
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1255 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1309
>gi|282165704|ref|NP_001164100.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Homo sapiens]
gi|317373586|sp|Q9HCK8.5|CHD8_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8;
AltName: Full=Helicase with SNF2 domain 1
Length = 2581
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|126277336|ref|XP_001368949.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Monodelphis
domestica]
Length = 2591
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1045 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1103
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1104 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1158
>gi|449279473|gb|EMC87054.1| Chromodomain-helicase-DNA-binding protein 7 [Columba livia]
Length = 3023
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1205 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1263
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1264 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1318
>gi|432094673|gb|ELK26153.1| Chromodomain-helicase-DNA-binding protein 7 [Myotis davidii]
Length = 2987
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1195 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1253
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1254 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1308
>gi|426232816|ref|XP_004010416.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 8 [Ovis aries]
Length = 2583
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|73999130|ref|XP_544097.2| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 1
[Canis lupus familiaris]
Length = 2995
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1202 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1260
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1261 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1315
>gi|83774068|dbj|BAE64193.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1471
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE I V++S+VQLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 634 VEKIIRVELSDVQLEYYKNILTKNYAALNDGAKGQKQSLL-NIMMELKKASNHPFMFPNA 692
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 693 EAKILDGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 741
>gi|410223700|gb|JAA09069.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
gi|410249874|gb|JAA12904.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
gi|410338049|gb|JAA37971.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
Length = 2581
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|391865405|gb|EIT74689.1| chromodomain-helicase DNA-binding protein [Aspergillus oryzae
3.042]
Length = 1519
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE I V++S+VQLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 682 VEKIIRVELSDVQLEYYKNILTKNYAALNDGAKGQKQSLL-NIMMELKKASNHPFMFPNA 740
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 741 EAKILDGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 789
>gi|338717121|ref|XP_003363589.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
[Equus caballus]
Length = 2583
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|332841815|ref|XP_003314292.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Pan
troglodytes]
gi|410305114|gb|JAA31157.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
Length = 2581
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|417515689|gb|JAA53657.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Sus scrofa]
Length = 2583
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|317155731|ref|XP_001825326.2| chromodomain helicase (Chd1) [Aspergillus oryzae RIB40]
Length = 1513
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE I V++S+VQLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 676 VEKIIRVELSDVQLEYYKNILTKNYAALNDGAKGQKQSLL-NIMMELKKASNHPFMFPNA 734
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 735 EAKILDGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 783
>gi|223953572|gb|ACN30001.1| chromodomain helicase DNA-binding protein 7 [Vicugna vicugna]
Length = 3000
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1199 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1257
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1258 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1312
>gi|301759851|ref|XP_002915762.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like
[Ailuropoda melanoleuca]
gi|281345480|gb|EFB21064.1| hypothetical protein PANDA_003773 [Ailuropoda melanoleuca]
Length = 2995
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1201 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1259
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1260 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1314
>gi|194214886|ref|XP_001915803.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Equus
caballus]
Length = 2995
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1202 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1260
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1261 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1315
>gi|126321078|ref|XP_001368272.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Monodelphis
domestica]
Length = 2999
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1203 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1261
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1262 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1316
>gi|301784895|ref|XP_002927862.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like
[Ailuropoda melanoleuca]
Length = 2583
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|297694660|ref|XP_002824590.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Pongo abelii]
Length = 2581
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|410961826|ref|XP_003987479.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 8 [Felis catus]
Length = 2594
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|380783899|gb|AFE63825.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Macaca
mulatta]
Length = 2581
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|296214425|ref|XP_002753816.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Callithrix jacchus]
Length = 2583
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|359472760|ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
Length = 2355
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV++S++Q E Y +L+K+ L L+N GV +I++ RK C+HPYL
Sbjct: 995 TERMVPVELSSIQAE-YYRAMLTKNYQL---LRNMGKGVAQQSMLNIVMQLRKVCNHPYL 1050
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + D E+L ++ +KAS KL LL +ML L +G RV+I Q+
Sbjct: 1051 IPGT-----EPDSGSGEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1098
>gi|346321814|gb|EGX91413.1| chromodomain helicase (Chd1), putative [Cordyceps militaris CM01]
Length = 1657
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQL+ Y +L+++ + S + L +I++ +K +HPY+ +
Sbjct: 683 EKIIRVELSDVQLDYY-KNILTRNYAALSDASSGHKNSLLNIMMELKKISNHPYMFPGAE 741
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + V +SGK+ LLD +LS+LK G RV+I Q++
Sbjct: 742 ERVLAGSVRREDLIKGLVTSSGKMMLLDQLLSKLKKDGHRVLIFSQMV 789
>gi|395861636|ref|XP_003803087.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Otolemur
garnettii]
Length = 2584
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|417407016|gb|JAA50143.1| Putative chromatin remodeling complex swi/snf component swi2
[Desmodus rotundus]
Length = 2583
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1046 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1104
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1105 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1159
>gi|296483394|tpg|DAA25509.1| TPA: chromodomain helicase DNA binding protein 8 [Bos taurus]
Length = 2540
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S + + L + ++ RKCC+HPYL++ +
Sbjct: 1003 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGA 1061
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L +LK G +V+I Q++
Sbjct: 1062 EEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMV 1116
>gi|358377998|gb|EHK15681.1| hypothetical protein TRIVIDRAFT_56270 [Trichoderma virens Gv29-8]
Length = 1658
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQL+ Y L +LC N L +I++ +K +HPY+ +
Sbjct: 696 EKIIRVELSDVQLDYYKNILTRNYAALCDA-TNGHKNSLLNIMMELKKVSNHPYMFPGAE 754
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + +SGK+ L+D +LS+LK G RV+I Q++
Sbjct: 755 ERVLAGSTRREDQIKGLIASSGKMMLIDQLLSKLKKDGHRVLIFSQMV 802
>gi|117606190|ref|NP_001071054.1| chromodomain-helicase-DNA-binding protein 7 [Gallus gallus]
gi|123883232|sp|Q06A37.1|CHD7_CHICK RecName: Full=Chromodomain-helicase-DNA-binding protein 7;
Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7
gi|115394059|gb|ABI96999.1| chromodomain helicase DNA-binding protein 7 [Gallus gallus]
Length = 3011
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1204 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1262
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1263 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1317
>gi|449494842|ref|XP_004175326.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 7 [Taeniopygia guttata]
Length = 3017
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1210 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1268
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1269 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1323
>gi|359072380|ref|XP_002692716.2| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Bos taurus]
Length = 2935
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1148 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1206
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1207 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1261
>gi|358415368|ref|XP_612494.5| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Bos taurus]
Length = 2940
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1153 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1211
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1212 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1266
>gi|296480623|tpg|DAA22738.1| TPA: kismet-like [Bos taurus]
Length = 2935
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1148 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1206
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1207 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1261
>gi|326917666|ref|XP_003205117.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 7-like [Meleagris gallopavo]
Length = 3011
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1204 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1262
Query: 147 LQSLL--VKDLELAE----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K+ A+ L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1263 EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1317
>gi|14028669|gb|AAK52454.1|AF325921_1 DNA-dependent ATPase SNF2H [Mus musculus]
Length = 1051
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 408 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 466
Query: 148 QS-LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK Q SRV+I Q+
Sbjct: 467 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQSSRVLIFSQM 507
>gi|432914383|ref|XP_004079085.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 8-like [Oryzias latipes]
Length = 2583
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 67/116 (57%), Gaps = 9/116 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCS--PLKNDPVGVLHDILISARKCCDHPYLVDK 145
E I V++++VQ ++Y +L ++ S S N V L + ++ RKCC+HPYL++
Sbjct: 1155 ETIIEVELTDVQ-KKYYRAILERNFSFLSLGANSNSNVPNLLNTMMELRKCCNHPYLING 1213
Query: 146 SLQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + ++ + E+ + +L ++++GKL LLD +L LK G +V+I Q++
Sbjct: 1214 AEEKIVAELREVYDPLAPDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMV 1269
>gi|213983091|ref|NP_001135693.1| helicase, lymphoid-specific [Xenopus (Silurana) tropicalis]
gi|197246289|gb|AAI69179.1| Unknown (protein for MGC:189674) [Xenopus (Silurana) tropicalis]
gi|197246404|gb|AAI68798.1| Unknown (protein for MGC:188967) [Xenopus (Silurana) tropicalis]
Length = 840
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 117 PLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDT 176
PL ++ + +I++ RKCC+HPYL++ L L +D ++ E L V +SGK LLD
Sbjct: 556 PLDSEVNLKMRNIMMLLRKCCNHPYLIEYPLDP-LTQDFKIDEEL---VNSSGKFLLLDR 611
Query: 177 MLSELKNQGSRVIILFQILII 197
+L E+K +G +V+I Q+ ++
Sbjct: 612 LLPEMKKRGHKVLIFSQMTMM 632
>gi|367043642|ref|XP_003652201.1| CHD1-like protein [Thielavia terrestris NRRL 8126]
gi|346999463|gb|AEO65865.1| CHD1-like protein [Thielavia terrestris NRRL 8126]
Length = 1675
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y +L+++ + S N L +I++ +K +HPY+ +
Sbjct: 702 EKIIRVELSDVQLEYY-KNILTRNYAALSDASNGHKQSLLNIMMELKKVSNHPYMFQGAE 760
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 761 ERVLGGSTRREDQIKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMV 808
>gi|238498532|ref|XP_002380501.1| chromodomain helicase (Chd1), putative [Aspergillus flavus
NRRL3357]
gi|220693775|gb|EED50120.1| chromodomain helicase (Chd1), putative [Aspergillus flavus
NRRL3357]
Length = 1446
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE I V++S+VQLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 676 VEKIIRVELSDVQLEYYKNILTKNYAALNDGAKGQKQSLL-NIMMELKKASNHPFMFPNA 734
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 735 EAKILDGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 783
>gi|47228067|emb|CAF97696.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2331
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 67/116 (57%), Gaps = 9/116 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCS--PLKNDPVGVLHDILISARKCCDHPYLVDK 145
E I V++++VQ ++Y +L ++ S S N V L + ++ RKCC+HPYL++
Sbjct: 1139 ETIIEVELTDVQ-KKYYRAILERNFSFLSLGANSNSNVPNLLNTMMELRKCCNHPYLING 1197
Query: 146 SLQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + ++ + E+ + +L ++++GKL LLD +L LK G +V+I Q++
Sbjct: 1198 AEEKIVAELREVYDPSAPDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMV 1253
>gi|2645435|gb|AAB87384.1| CHD3 [Drosophila melanogaster]
Length = 1518
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S++Q +++ +L+K+ + V L +I++ RKCC+HPYL +
Sbjct: 510 EFIVRVELSSMQ-KKFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAA 568
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + L E + KASGKL LL ML +LK RV++ Q+
Sbjct: 569 EEATISPSGLYEMSSL-TKASGKLDLLSKMLKQLKADNHRVLLFSQM 614
>gi|431909219|gb|ELK12808.1| Putative global transcription activator SNF2L1 [Pteropus alecto]
Length = 1012
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 403 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 461
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L +LK QGSRV+I Q+
Sbjct: 462 PG---PPYTTDEHI---VSNSGKMVVLDKLLVKLKEQGSRVLIFSQM 502
>gi|115441433|ref|NP_001044996.1| Os01g0881000 [Oryza sativa Japonica Group]
gi|56784632|dbj|BAD81679.1| putative chromatin remodeling factor CHD3 [Oryza sativa Japonica
Group]
gi|113534527|dbj|BAF06910.1| Os01g0881000 [Oryza sativa Japonica Group]
Length = 1150
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Query: 81 LDSSRFVEYWI--PVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
L S V+ W+ P +++ Q E Y L L S ++N L++IL+ RKCC+
Sbjct: 761 LTDSMPVKKWVEVPCALADSQRELYINILERNYSKLNSAIRNGRKLSLNNILMELRKCCN 820
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HP ++ Q+ +D+ L+ + +SGKLQLL +L LK +G+RV+I Q+
Sbjct: 821 HPVGLEVGQQA--TEDVFLS-----LIASSGKLQLLHKLLPRLKERGNRVLIFSQM 869
>gi|70993280|ref|XP_751487.1| chromatin remodeling complex subunit (Chd3) [Aspergillus fumigatus
Af293]
gi|66849121|gb|EAL89449.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus
fumigatus Af293]
Length = 1509
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 14/115 (12%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPL---KNDPVGV-------LHDILISARKCCDHP 140
+PV +S VQ + Y ++L+K+ L + N+ GV L++IL+ RKC HP
Sbjct: 905 VPVSMSVVQKKLY-KSILAKNPQLIKAIFQRNNNSEGVKQADRHNLNNILMQLRKCLCHP 963
Query: 141 YLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ ++++ ++L V+ASGKL+LL+ ML +LK +G RV+I Q L
Sbjct: 964 FVYSEAIEERTANSAASHKHL---VEASGKLKLLEIMLPKLKQRGHRVLIFSQFL 1015
>gi|70953850|ref|XP_746001.1| PfSNF2L [Plasmodium chabaudi chabaudi]
gi|56526492|emb|CAH76599.1| PfSNF2L, putative [Plasmodium chabaudi chabaudi]
Length = 879
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 12/108 (11%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E +I V +S +Q + Y +LSK++ + + + +L +IL+ RKCC+HPYL D
Sbjct: 20 EIYIFVGMSKLQKKLY-SDILSKNIDVINAMTGSKNQML-NILMQLRKCCNHPYLFD--- 74
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+E Y++ ++ SGK+ LLD +L LK + SRV++ Q+
Sbjct: 75 ------GIEEPPYIEGNHIETSGKMSLLDKLLPRLKKENSRVLLFSQM 116
>gi|24666729|ref|NP_649111.1| Chd3 [Drosophila melanogaster]
gi|25089877|sp|O16102.3|CHD3_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein 3; AltName:
Full=ATP-dependent helicase Chd3
gi|23093148|gb|AAF49162.2| Chd3 [Drosophila melanogaster]
Length = 892
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S++Q +++ +L+K+ + V L +I++ RKCC+HPYL +
Sbjct: 507 EFIVRVELSSMQ-KKFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAA 565
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + L E + KASGKL LL ML +LK RV++ Q+
Sbjct: 566 EEATISPSGLYEMSSL-TKASGKLDLLSKMLKQLKADNHRVLLFSQM 611
>gi|344286280|ref|XP_003414887.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription
activator SNF2L1-like [Loxodonta africana]
Length = 1016
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 358 EIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGTE 416
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L+ LK QGSRV+I Q+
Sbjct: 417 PG---PPYTTDEHI---VINSGKMLVLDKLLARLKEQGSRVLIFSQM 457
>gi|159125579|gb|EDP50696.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus
fumigatus A1163]
Length = 1509
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 14/115 (12%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPL---KNDPVGV-------LHDILISARKCCDHP 140
+PV +S VQ + Y ++L+K+ L + N+ GV L++IL+ RKC HP
Sbjct: 905 VPVSMSVVQKKLY-KSILAKNPQLIKAIFQRNNNSEGVKQADRHNLNNILMQLRKCLCHP 963
Query: 141 YLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ ++++ ++L V+ASGKL+LL+ ML +LK +G RV+I Q L
Sbjct: 964 FVYSEAIEERTANSAASHKHL---VEASGKLKLLEIMLPKLKQRGHRVLIFSQFL 1015
>gi|126331506|ref|XP_001377204.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Monodelphis
domestica]
Length = 1050
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 407 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 465
Query: 148 QS-LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK Q SRV+I Q+
Sbjct: 466 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQDSRVLIFSQM 506
>gi|255947258|ref|XP_002564396.1| Pc22g03550 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591413|emb|CAP97643.1| Pc22g03550 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1454
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 12/118 (10%)
Query: 86 FVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVL--------HDILISARKCC 137
V+ IP+ +S VQ + Y ++L K+ L + G L ++ILI RKC
Sbjct: 869 MVQIIIPISMSVVQKKLY-RSILKKNPQLIKAICKKQTGALKKAERHNLNNILIQLRKCL 927
Query: 138 DHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
HPY+ ++ ++ + D +L+ + V+ASGKL+LL+ ML +L+ +G RV+I Q L
Sbjct: 928 CHPYIYNRDIEEQTI-DPQLSHHR--LVEASGKLRLLNLMLPQLRARGHRVLIFSQFL 982
>gi|408397898|gb|EKJ77035.1| hypothetical protein FPSE_02679 [Fusarium pseudograminearum CS3096]
Length = 1671
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 59 DAIDNLGSLKEKTSKYVAYGGK----LDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSL 114
DA + L L + + Y+ K D E I V++S+VQL+ Y L +L
Sbjct: 650 DAQEKLQQLHKAIAPYILRRTKETVESDLPPKTEKIIRVELSDVQLDYYKNILTRNYSAL 709
Query: 115 CSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLL 174
C N L +I++ +K +HPY+ + + +L + + + + +SGK+ LL
Sbjct: 710 CDA-TNGHKNSLLNIMMELKKISNHPYMFPGAEEKVLAGSVRREDQIKGLIASSGKMMLL 768
Query: 175 DTMLSELKNQGSRVIILFQIL 195
D +LS+L G RV+I Q++
Sbjct: 769 DQLLSKLNKDGHRVLIFSQMV 789
>gi|341890749|gb|EGT46684.1| hypothetical protein CAEBREN_05565 [Caenorhabditis brenneri]
Length = 1728
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y +L+++ + +KN L++IL+ +KCC+HPYL K+
Sbjct: 837 VRVELSPMQ-KTYYKNILTRNFEALN-VKNGAQVSLNNILVELKKCCNHPYLFAKASIEA 894
Query: 151 LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCENE 205
+ E D+ +K SGK LL M+ +LK+ G RV+I Q +L I C NE
Sbjct: 895 PKRQDSYYEGEDL-IKNSGKFILLQKMMRKLKDGGHRVLIFSQMTMMLDILEDFCHNE 951
>gi|46125449|ref|XP_387278.1| hypothetical protein FG07102.1 [Gibberella zeae PH-1]
Length = 1627
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 59 DAIDNLGSLKEKTSKYVAYGGK----LDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSL 114
DA + L L + + Y+ K D E I V++S+VQL+ Y L +L
Sbjct: 650 DAQEKLQQLHKAIAPYILRRTKETVESDLPPKTEKIIRVELSDVQLDYYKNILTRNYSAL 709
Query: 115 CSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLL 174
C N L +I++ +K +HPY+ + + +L + + + + +SGK+ LL
Sbjct: 710 CDA-TNGHKNSLLNIMMELKKISNHPYMFPGAEEKVLAGSVRREDQIKGLIASSGKMMLL 768
Query: 175 DTMLSELKNQGSRVIILFQIL 195
D +LS+L G RV+I Q++
Sbjct: 769 DQLLSKLNKDGHRVLIFSQMV 789
>gi|357605668|gb|EHJ64730.1| putative Chromodomain helicase-DNA-binding protein Mi-2-like protein
[Danaus plexippus]
Length = 1963
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L ++++ +KCC+HPYL +
Sbjct: 962 EFIVRVELSPMQ-KKYYKYILTRNYEALNPKSGGQTVSLLNVMMDLKKCCNHPYLFPVAA 1020
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + E + VKASGKL L+ ML +LK QG RV+I Q+
Sbjct: 1021 EEAPLGPHGNYETQAL-VKASGKLVLMSKMLKQLKEQGHRVLIFSQM 1066
>gi|348540018|ref|XP_003457485.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like
[Oreochromis niloticus]
Length = 2599
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 67/116 (57%), Gaps = 9/116 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCS--PLKNDPVGVLHDILISARKCCDHPYLVDK 145
E I V+++++Q ++Y +L ++ S S N V L + ++ RKCC+HPYL++
Sbjct: 1161 ETIIEVELTDIQ-KKYYRAILERNFSFLSLGASSNSNVPNLLNTMMELRKCCNHPYLING 1219
Query: 146 SLQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + ++ + E+ + +L ++++GKL LLD +L LK G +V+I Q++
Sbjct: 1220 AEEKIVAELREVYDPLAPDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMV 1275
>gi|345324924|ref|XP_001513276.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5
[Ornithorhynchus anatinus]
Length = 1051
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 408 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 466
Query: 148 QS-LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK Q SRV+I Q+
Sbjct: 467 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQDSRVLIFSQM 507
>gi|410928769|ref|XP_003977772.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Takifugu
rubripes]
Length = 2526
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 67/116 (57%), Gaps = 9/116 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCS--PLKNDPVGVLHDILISARKCCDHPYLVDK 145
E I V+++++Q ++Y +L ++ S S N V L + ++ RKCC+HPYL++
Sbjct: 1118 ETIIEVELTDIQ-KKYYRAILERNFSFLSLGANSNSNVPNLLNTMMELRKCCNHPYLING 1176
Query: 146 SLQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + ++ + E+ + +L ++++GKL LLD +L LK G +V+I Q++
Sbjct: 1177 AEEKIVAELREVYDPLAPDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMV 1232
>gi|395542615|ref|XP_003773222.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Sarcophilus
harrisii]
Length = 1041
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 398 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 456
Query: 148 QS-LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D+ L V SGK+ +LD +L +LK Q SRV+I Q+
Sbjct: 457 PGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQDSRVLIFSQM 497
>gi|195428619|ref|XP_002062369.1| GK17504 [Drosophila willistoni]
gi|194158454|gb|EDW73355.1| GK17504 [Drosophila willistoni]
Length = 2023
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 19 EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYG 78
+ GE D S +Q H M H R L D + N+ S
Sbjct: 941 QAFQGEFADVSKEEQVKRLHEMLGPHMLR-------RLKTDVLKNMPS------------ 981
Query: 79 GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
S F+ + V++S +Q +++ +L+K+ + L +I++ +KCC+
Sbjct: 982 ----KSEFI---VRVELSAMQ-KKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCN 1033
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HPYL + + L L E ++ KA+GKL LL ML +LK+Q RV+I Q+
Sbjct: 1034 HPYLFPSAAEEALTSAGGLYE-INSLTKAAGKLVLLSKMLKQLKSQNHRVLIFSQM 1088
>gi|367020200|ref|XP_003659385.1| CDH1-like protein [Myceliophthora thermophila ATCC 42464]
gi|347006652|gb|AEO54140.1| CDH1-like protein [Myceliophthora thermophila ATCC 42464]
Length = 1670
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y +L+++ + N L +I++ +K +HPY+ +
Sbjct: 700 EKIIRVELSDVQLEYY-KNILTRNYAALRDASNGHKQSLLNIMMELKKVSNHPYMFQGAE 758
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 759 ERVLAGSTRREDQIKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMV 806
>gi|2213862|gb|AAC47719.1| PfSNF2L [Plasmodium falciparum]
Length = 1422
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E +I V +S +Q + Y +LSK++ + + + +L +IL+ RKCC+HPYL D
Sbjct: 551 EIYIFVGMSKLQKKLY-SDILSKNIDVLNAMTGSKNQML-NILMQLRKCCNHPYLFDGIE 608
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ ++ L E SGK+ LLD +L LK + SRV++ Q+
Sbjct: 609 EPPYIEGNHLIE-------TSGKMSLLDKLLPRLKKENSRVLLFSQM 648
>gi|124803472|ref|XP_001347729.1| PfSNF2L [Plasmodium falciparum 3D7]
gi|23495979|gb|AAN35642.1|AE014836_39 PfSNF2L [Plasmodium falciparum 3D7]
Length = 1426
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E +I V +S +Q + Y +LSK++ + + + +L +IL+ RKCC+HPYL D
Sbjct: 554 EIYIFVGMSKLQKKLY-SDILSKNIDVLNAMTGSKNQML-NILMQLRKCCNHPYLFDGIE 611
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ ++ L E SGK+ LLD +L LK + SRV++ Q+
Sbjct: 612 EPPYIEGNHLIE-------TSGKMSLLDKLLPRLKKENSRVLLFSQM 651
>gi|66809969|ref|XP_638708.1| chromo domain-containing protein [Dictyostelium discoideum AX4]
gi|60467321|gb|EAL65353.1| chromo domain-containing protein [Dictyostelium discoideum AX4]
Length = 1917
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V +SNVQ ++Y +L+K+ + K + +L +I+ +K C+HPYL +
Sbjct: 989 ERILRVDLSNVQ-KKYYKWILTKNFQELNKGKGEKTTLL-NIMTELKKTCNHPYLYQNAR 1046
Query: 148 QS--LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L KDL LD ++ASGKL LLD +L LK G RV+I Q++
Sbjct: 1047 DECELGAKDL-----LDSMIRASGKLVLLDKLLIRLKETGHRVLIFSQMV 1091
>gi|327269727|ref|XP_003219644.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Anolis
carolinensis]
Length = 3008
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL++ +
Sbjct: 1196 ETIIEVELTNIQ-KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA 1254
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E L ++A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1255 EEKILEEFKETHNPDSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1309
>gi|389583592|dbj|GAB66326.1| helicase [Plasmodium cynomolgi strain B]
Length = 1455
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E ++ V +S +Q + Y +LSK++ + + + +L +IL+ RKCC+HPYL D
Sbjct: 588 EIYVFVGMSKLQKKLY-SDILSKNIDVINAMTGSKNQML-NILMQLRKCCNHPYLFDGIE 645
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ V+ L E SGK+ LLD +L LK + SRV++ Q+
Sbjct: 646 EPPYVEGNHLIE-------TSGKMSLLDKLLPRLKKENSRVLLFSQM 685
>gi|17946168|gb|AAL49125.1| RE55932p [Drosophila melanogaster]
Length = 627
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S++Q +++ +L+K+ + V L +I++ RKCC+HPYL +
Sbjct: 507 EFIVRVELSSMQ-KKFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAA 565
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + L E + KASGKL LL ML +LK RV++ Q+
Sbjct: 566 EEATISPSGLYEMSSL-TKASGKLDLLSKMLKQLKADNHRVLLFSQM 611
>gi|292498|gb|AAA80560.1| transcription activator, partial [Homo sapiens]
Length = 769
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 95 ISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKD 154
+S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 419 LSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAEPG---PP 474
Query: 155 LELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 475 YTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|321479460|gb|EFX90416.1| hypothetical protein DAPPUDRAFT_232072 [Daphnia pulex]
Length = 2083
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q + Y L +L S V +L +I++ +KCC+HPYL +
Sbjct: 1065 EFIVRVELSPMQKKYYKYVLTRNFEALNSRTGGQQVSLL-NIMMDLKKCCNHPYLFPVAS 1123
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Q + E + VKASGKL LL ML LK QG RV+I Q+
Sbjct: 1124 QEAPCLQNGMYETTAL-VKASGKLVLLSKMLRVLKEQGHRVLIFSQM 1169
>gi|195591505|ref|XP_002085481.1| GD14801 [Drosophila simulans]
gi|194197490|gb|EDX11066.1| GD14801 [Drosophila simulans]
Length = 893
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S++Q +++ +L+K+ + V L +I++ RKCC+HPYL +
Sbjct: 508 EFIVRVELSSMQ-KKFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAA 566
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + + E ++ KASGKL LL ML +LK RV++ Q+
Sbjct: 567 EEAPISPSGIYE-MNSLTKASGKLDLLSKMLKQLKKDNHRVLLFSQM 612
>gi|119499894|ref|XP_001266704.1| chromatin remodeling complex subunit (Chd3), putative [Neosartorya
fischeri NRRL 181]
gi|119414869|gb|EAW24807.1| chromatin remodeling complex subunit (Chd3), putative [Neosartorya
fischeri NRRL 181]
Length = 1509
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 14/115 (12%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPL---KNDPVGV-------LHDILISARKCCDHP 140
+PV +S VQ + Y ++L+K+ L + N+ GV L++IL+ RKC HP
Sbjct: 904 VPVSMSVVQKKLY-KSILAKNPQLIKAIFQRNNNSEGVKQADRHNLNNILMQLRKCLCHP 962
Query: 141 YLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ ++++ ++L V+ASGKL+LL+ ML +LK +G RV+I Q L
Sbjct: 963 FVYSEAIEERTANAAASHKHL---VEASGKLKLLEIMLPKLKQRGHRVLIFSQFL 1014
>gi|426397386|ref|XP_004064899.1| PREDICTED: probable global transcription activator SNF2L1 [Gorilla
gorilla gorilla]
Length = 872
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 95 ISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKD 154
+S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 419 LSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAEPG---PP 474
Query: 155 LELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 475 YTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|299115203|emb|CBN74034.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1524
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 41 PSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFV----EYWIPVQIS 96
P + +G V + DL +++ L+E Y+ K + V E I V+++
Sbjct: 608 PKFRDQQGFVEKYGDL--QEAEDVSELQEAIKPYLLRRMKEGVEKAVPPKEEIIIEVELT 665
Query: 97 NVQLEQYCGTLLSKSLSLC----SPLKNDPVGVLHDILISARKCCDHPYL---VDKSLQS 149
+Q +QY + ++ + K+ P L ++ + RKCC+HP+L V+ +
Sbjct: 666 EIQ-KQYYRAIYDRNTTFLLQGKKQAKDAPS--LMNLAMQLRKCCNHPFLITGVEDDVSQ 722
Query: 150 LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILIIRAKVCENEILGY 209
L + E+L VK SGKL LLD +L LK QG RV +LF I + E+ ++
Sbjct: 723 QLGGNKTSKEHL---VKHSGKLVLLDKLLPRLKTQGHRV-LLFSQFKIMLDILEDYLIAS 778
Query: 210 CISLG 214
IS G
Sbjct: 779 DISYG 783
>gi|145522682|ref|XP_001447185.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414685|emb|CAK79788.1| unnamed protein product [Paramecium tetraurelia]
Length = 1508
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLE-LAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L+++ I RKCC+HPYL+ + +Q+ L K+ + +Y++ V++SGK+ LLD +L++ +N+
Sbjct: 690 LNNLEIQLRKCCNHPYLI-QEMQNDLTKECQNKNDYINKLVESSGKMILLDKLLNKFRNE 748
Query: 185 GSRVIILFQILII 197
G +++I Q ++
Sbjct: 749 GKKMLIFSQFTMM 761
>gi|83286649|ref|XP_730253.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23489925|gb|EAA21818.1| SNF2 family N-terminal domain, putative [Plasmodium yoelii yoelii]
Length = 1350
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E +I V +S +Q + Y +LSK++ + + + +L +IL+ RKCC+HPYL D
Sbjct: 476 EIYIFVGMSKLQKKLY-SDILSKNIDVINAMTGSKNQML-NILMQLRKCCNHPYLFDGIE 533
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ ++ L E SGK+ LLD +L LK + SRV++ Q+
Sbjct: 534 EPPYIEGNHLIE-------TSGKMSLLDKLLPRLKKENSRVLLFSQM 573
>gi|302421718|ref|XP_003008689.1| chromodomain-helicase-DNA-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351835|gb|EEY14263.1| chromodomain-helicase-DNA-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 1710
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 63 NLGSLKEKTSKYVAYGGKLDSSRFV----EYWIPVQISNVQLEQYCGTLLSKSLSLCSPL 118
NL L EK Y K +F+ + +PV ++ +Q E+ C ++++KS L +
Sbjct: 1008 NLPKLHEKIRPYFLRRTKAQVLKFLPPMAQIILPVSMTILQ-EKLCKSIMAKSPELIKAI 1066
Query: 119 -------KNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKL 171
K G L++IL+ RKC HP++ ++++ + L + AS KL
Sbjct: 1067 FADDKIKKTKDRGSLNNILMQLRKCLCHPFIYSQAIEERSDDPIVTQRNL---ISASAKL 1123
Query: 172 QLLDTMLSELKNQGSRVIILFQIL 195
LL+ ML +LK +G RV++ Q L
Sbjct: 1124 LLLEIMLPKLKERGHRVLLFSQFL 1147
>gi|167517477|ref|XP_001743079.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778178|gb|EDQ91793.1| predicted protein [Monosiga brevicollis MX1]
Length = 751
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 12/127 (9%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V +S+ Q +QY T+L+++ + +K L +I++ +KCC+H L+D
Sbjct: 394 VERILRVDLSSRQ-QQYYKTILTRNYTELRDIKKSKSSNLLNIVMELKKCCNHTNLIDDG 452
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILIIRAKVCENEI 206
L + D L ++ SGKL LLD +L+ LK G RV+I Q++++ ++
Sbjct: 453 LDNQGGPDP-----LTRLLRGSGKLILLDKLLTRLKESGHRVLIFSQMVVML------DV 501
Query: 207 LGYCISL 213
L Y ++L
Sbjct: 502 LAYYLAL 508
>gi|194271429|gb|ACF37172.1| SNF2LT [Homo sapiens]
Length = 776
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 95 ISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKD 154
+S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 419 LSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAEPG---PP 474
Query: 155 LELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ +LD +L++LK QGSRV+I Q+
Sbjct: 475 YTTDEHI---VSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
>gi|354473626|ref|XP_003499035.1| PREDICTED: probable global transcription activator SNF2L1
[Cricetulus griseus]
Length = 1009
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 367 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 425
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ LD +L+++K QGSRV+I Q+
Sbjct: 426 PG---PPYTTDEHI---VSNSGKMVALDKLLAKIKEQGSRVLIFSQM 466
>gi|20152037|gb|AAM11378.1| LD39323p [Drosophila melanogaster]
Length = 1101
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V+++++Q +QY +L+K+ K +I+I +KCC+H L+ S
Sbjct: 225 VEQILRVEMTSLQ-KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPS 283
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L+ L+ E L +K SGKL LLD +L LK G RV+I Q++
Sbjct: 284 EFELM--GLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMV 330
>gi|410907027|ref|XP_003966993.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Takifugu
rubripes]
Length = 2102
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 1007 TELIVRVELSPMQKKYYKHILTKNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLFPAA 1065
Query: 147 LQSLLVKDLELAEYLDVGV-KASGKLQLLDTMLSELKNQGSRVIILFQI 194
S+ + Y + KASGKL LL ML +LK QG RV++ Q+
Sbjct: 1066 --SMEAQKTPTGAYEGSALTKASGKLTLLQKMLRKLKEQGHRVLVFSQM 1112
>gi|189515794|ref|XP_697956.3| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Danio rerio]
Length = 3094
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 16/123 (13%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP---------VGVLHDILISARKCCD 138
E I V+++NVQ ++Y +L K+ + S V L + ++ RKCC+
Sbjct: 1247 ETIIEVELTNVQ-KKYYRAILEKNFAFLSKSGAGGGSGGGGGSNVPNLLNTMMELRKCCN 1305
Query: 139 HPYLVDKSLQSLL-----VKDLELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILF 192
HPYL++ + + ++ L+ E+ L ++A+GKL L+D +L +LK G RV+I
Sbjct: 1306 HPYLINGAEEKIMEEFRETHPLDQPEFHLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFS 1365
Query: 193 QIL 195
Q++
Sbjct: 1366 QMV 1368
>gi|336267056|ref|XP_003348294.1| hypothetical protein SMAC_02791 [Sordaria macrospora k-hell]
gi|380091948|emb|CCC10214.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1667
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQL+ Y +L+++ + S N L +I++ +K +HPY+ +
Sbjct: 708 EKIIRVELSDVQLDYY-KNILTRNYAALSDASNGHKQSLLNIMMELKKVSNHPYMFQGAE 766
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 767 ERVLNGSTRREDQIKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMV 814
>gi|221055808|ref|XP_002259042.1| snf2 family n-terminal domain [Plasmodium knowlesi strain H]
gi|193809113|emb|CAQ39815.1| snf2 family n-terminal domain, putative [Plasmodium knowlesi strain
H]
Length = 1382
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E ++ V +S +Q + Y +LSK++ + + + +L +IL+ RKCC+HPYL D
Sbjct: 534 EIYVFVGMSKLQKKLY-SDILSKNIDVINAMTGSKNQML-NILMQLRKCCNHPYLFDGIE 591
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ ++ L E SGK+ LLD +L LK + SRV++ Q+
Sbjct: 592 EPPYIEGNHLIE-------TSGKMSLLDKLLPRLKKENSRVLLFSQM 631
>gi|281203153|gb|EFA77354.1| chromo domain-containing protein [Polysphondylium pallidum PN500]
Length = 1842
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 36 EYHNMPSLHESRGDVHRKDDLMVDAIDNL--GSLKEKTSKYVAYGGKLDSSRFVEYWIPV 93
++H++ + D+ KD + + N+ L + K V + R + V
Sbjct: 897 KFHSLDEFQDQYADLKEKDQ--IAELHNVLKPHLLRRIKKEVEKSLPAKTERILR----V 950
Query: 94 QISNVQLEQYCGTLLSKSL-SLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
+S Q ++Y +LSK+ L +K + +L +I+ +K C+HPYL + +
Sbjct: 951 DLSPTQ-KKYYRWILSKNFHELNKGVKGEKTTLL-NIVAELKKTCNHPYLFENA------ 1002
Query: 153 KDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+DL LD VKASGKL LLD +L LK G RV+I Q++
Sbjct: 1003 EDLNAENPLDAMVKASGKLILLDKLLVRLKETGHRVLIFSQMV 1045
>gi|260945000|ref|XP_002616798.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720]
gi|238850447|gb|EEQ39911.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720]
Length = 1259
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S+VQ+E Y + +L + +K + +L +++ +K +HPYL D + + +L
Sbjct: 442 VELSDVQMEYYRNIITKNYAALNAGVKGSQISLL-NVMSELKKASNHPYLFDGAEERVLA 500
Query: 153 KDLELAE--YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
K + L V +SGK+ LL+ +L+ LK +G RV+I Q++ I
Sbjct: 501 KGGSTSRDNVLKGLVMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRI 547
>gi|156098278|ref|XP_001615171.1| helicase [Plasmodium vivax Sal-1]
gi|148804045|gb|EDL45444.1| helicase, putative [Plasmodium vivax]
Length = 1399
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E ++ V +S +Q + Y +LSK++ + + + +L +IL+ RKCC+HPYL D
Sbjct: 549 EIYVFVGMSKLQKKLY-SDILSKNIDVINAMTGSKNQML-NILMQLRKCCNHPYLFDGIE 606
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ ++ L E SGK+ LLD +L LK + SRV++ Q+
Sbjct: 607 EPPYIEGNHLIE-------TSGKMSLLDKLLPRLKKENSRVLLFSQM 646
>gi|449674249|ref|XP_002161239.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like,
partial [Hydra magnipapillata]
Length = 1086
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSL-SLCSPLKNDPVGVLHDILISARKCCDHPYLVDK 145
VE + V++S +Q +QY +L++++ LC LK G+L +I++ +KCC+H L+
Sbjct: 46 VEQILRVEMSQIQ-KQYYKLILTRNVHELCKELKGKFTGLL-NIIVELKKCCNHSNLIKP 103
Query: 146 SLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
S L + D + + L ++ SGK+ LLD +L LK G RV+I Q++
Sbjct: 104 S--ELCLSDPSMLQTL---IRGSGKMILLDKLLCRLKETGHRVLIFSQMV 148
>gi|149060085|gb|EDM10901.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 (predicted) [Rattus
norvegicus]
Length = 985
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 339 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 397
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ LD +L+ +K QGSRV+I Q+
Sbjct: 398 PG---PPYTTDEHI---VSNSGKMVALDKLLARIKEQGSRVLIFSQM 438
>gi|449281262|gb|EMC88383.1| Chromodomain-helicase-DNA-binding protein 2 [Columba livia]
Length = 1719
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 711 VEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 769
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ LE + L +++SGKL LLD +L+ L+++G+RV+I Q++ +
Sbjct: 770 EENERENGLETLQSL---IRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRM 817
>gi|238624120|ref|NP_001121770.2| chromodomain helicase DNA binding protein 1 [Danio rerio]
Length = 1693
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S VQ + Y L +L K G L +I++ +KCC+H YL+
Sbjct: 697 VEQILRVEMSAVQKQYYKWILTRNYKALSKGTKGSTSGFL-NIMMELKKCCNHCYLIKPP 755
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
+ E ++L V++SGKL LLD +L LK +G RV+I Q++ +
Sbjct: 756 DDNEFYNRQEGLQHL---VRSSGKLILLDKLLVRLKERGHRVLIFSQMVRM 803
>gi|67521594|ref|XP_658859.1| hypothetical protein AN1255.2 [Aspergillus nidulans FGSC A4]
gi|40746692|gb|EAA65848.1| hypothetical protein AN1255.2 [Aspergillus nidulans FGSC A4]
gi|259488424|tpe|CBF87846.1| TPA: chromodomain helicase (Chd1), putative (AFU_orthologue;
AFUA_1G10290) [Aspergillus nidulans FGSC A4]
Length = 1517
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 676 EKIIRVELSDVQLEYYKNILTKNYAALNEGTKGQKQSLL-NIMMELKKASNHPFMFPSAE 734
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 735 TKILEGSTRREDVLRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 782
>gi|403225017|ref|NP_001258119.1| probable global transcription activator SNF2L1 [Rattus norvegicus]
Length = 1062
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 416 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 474
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ LD +L+ +K QGSRV+I Q+
Sbjct: 475 PG---PPYTTDEHI---VSNSGKMVALDKLLARIKEQGSRVLIFSQM 515
>gi|405970083|gb|EKC35018.1| Chromodomain-helicase-DNA-binding protein 1-like protein
[Crassostrea gigas]
Length = 807
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 13/103 (12%)
Query: 95 ISNVQLEQYCGTLLSKSLSLCSPLKNDPVGV---LHDILISARKCCDHPYLVDKSLQSLL 151
IS VQ + Y LL+K +S+ N P G L +IL+ RKC +HPYL D +
Sbjct: 270 ISKVQKKLYKA-LLTKDISVFDT--NRPGGSSPSLMNILMQLRKCVNHPYLFD----GIE 322
Query: 152 VKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ EL E+L V+ASGKL L+D +L+ LK G +V++ Q+
Sbjct: 323 PEPFELGEHL---VEASGKLVLIDRLLNYLKTTGHKVLMFSQM 362
>gi|427782997|gb|JAA56950.1| Putative chromatin remodeling complex swi/snf component swi2
[Rhipicephalus pulchellus]
Length = 1022
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y LL + K D + +L +IL+ RKCC+HPYL D +
Sbjct: 376 EVKIYVGLSKMQREWYTKCLLKDIDVVNGAGKVDKMRLL-NILMQLRKCCNHPYLFDGAE 434
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCEN 204
E Y GK+ +LD +L +LK QGSRV+I Q +L I C
Sbjct: 435 PGPPYTTDEHIVY------NCGKMVILDKLLPKLKAQGSRVLIFSQMTRMLDILEDYCLW 488
Query: 205 EILGYC 210
GYC
Sbjct: 489 RRYGYC 494
>gi|357116837|ref|XP_003560183.1| PREDICTED: uncharacterized protein LOC100822490 [Brachypodium
distachyon]
Length = 2256
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV+++++Q E Y +L+K+ + L+N G H +I++ RK C+HPYL
Sbjct: 899 TERMVPVELTSIQAE-YYRAMLTKNYQV---LRNTGKGGAHQSLLNIVMQLRKVCNHPYL 954
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + D E+L ++ +KAS KL LL +ML L G RV+I Q+
Sbjct: 955 IPGT-----EPDSGSPEFLHEMRIKASAKLALLHSMLKILNKDGHRVLIFSQM 1002
>gi|317138165|ref|XP_001816719.2| chromatin remodeling complex subunit (Chd3) [Aspergillus oryzae
RIB40]
Length = 1230
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 14/119 (11%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPL---KNDPVGV-------LHDILISARKC 136
V+ +PV +S VQ + Y ++L+K+ L + KND G L++IL+ RKC
Sbjct: 635 VQIIVPVSMSVVQKKLY-KSILAKNPQLIKAIFQRKNDNQGPKQAERQNLNNILMQLRKC 693
Query: 137 CDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
HP++ +++ ++L V+A+GKLQLL ML +L+ +G RV+I Q L
Sbjct: 694 LCHPFIYSTAIEERTNNATASHKHL---VEAAGKLQLLQLMLPKLRERGHRVLIFSQFL 749
>gi|211853152|gb|AAI68553.1| chd9 protein [Xenopus (Silurana) tropicalis]
Length = 2753
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL+ +
Sbjct: 961 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA 1019
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E YL ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1020 EEKILGEFRETYNQMAADFYLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1074
>gi|320590071|gb|EFX02516.1| chromatin remodeling complex subunit [Grosmannia clavigera kw1407]
Length = 1931
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 36 EYHNMPSLHESRGDVHRKDDLMVD-AIDNLGSLKEKTSKYVAYGGKLDSSRFV----EYW 90
E N+ +S D D+ D +NL L + Y K + +F+ +
Sbjct: 1094 ELFNLLQFVDSNNDAAELDERYSDITAENLPELHKLIRPYFLRRTKAEVLKFLPPMAQII 1153
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLC------SPLKNDPVGVLHDILISARKCCDHPYLVD 144
+PV ++ +Q E+ C ++++K+ L + L+ L++IL+ RKC HP++ +
Sbjct: 1154 VPVSMTVLQ-EKLCKSIMAKNPDLIRAIFSKTRLRVAERSSLNNILMQLRKCLCHPFIYN 1212
Query: 145 KSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+++ V + + L V+AS KL LL ML +LK +G RV++ Q L
Sbjct: 1213 DAIEEKTVDQATMVQNL---VEASSKLVLLRIMLPKLKARGRRVLLFSQFL 1260
>gi|432950977|ref|XP_004084701.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Oryzias latipes]
Length = 996
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQS- 149
I V +S +Q E Y L+ L S K D + +L ++L+ RKCC+HPYL D +
Sbjct: 398 IYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLL-NVLMQLRKCCNHPYLFDGAEPGP 456
Query: 150 LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
DL L V SGK+ +LD +L ++K QGSRV+I Q+
Sbjct: 457 PYTTDLHL-------VVNSGKMVVLDKLLPKMKVQGSRVLIFSQM 494
>gi|116180352|ref|XP_001220025.1| hypothetical protein CHGG_00804 [Chaetomium globosum CBS 148.51]
gi|88185101|gb|EAQ92569.1| hypothetical protein CHGG_00804 [Chaetomium globosum CBS 148.51]
Length = 1644
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y +L+++ + N L +I++ +K +HPY+ +
Sbjct: 700 EKIIRVELSDVQLEYY-KNILTRNYAALRDASNGHKQSLLNIMMELKKVSNHPYMFAGAE 758
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 759 ERVLAGSSRREDQIKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMV 806
>gi|118089662|ref|XP_420329.2| PREDICTED: probable global transcription activator SNF2L1 [Gallus
gallus]
Length = 1031
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 385 EVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 443
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D L + SGK+ +LD +L++L+ QGSRV++ Q+
Sbjct: 444 PGPPYTTDTHL-------ITNSGKMLVLDKLLAKLREQGSRVLLFSQM 484
>gi|449498933|ref|XP_002192409.2| PREDICTED: probable global transcription activator SNF2L1-like
[Taeniopygia guttata]
Length = 1185
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 539 EVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 597
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D L + SGK+ +LD +L++L+ QGSRV++ Q+
Sbjct: 598 PGPPYTTDTHL-------ITNSGKMLVLDKLLAKLREQGSRVLLFSQM 638
>gi|449273767|gb|EMC83176.1| putative global transcription activator SNF2L1, partial [Columba
livia]
Length = 982
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 336 EVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 394
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D L + SGK+ +LD +L++L+ QGSRV++ Q+
Sbjct: 395 PGPPYTTDTHL-------ITNSGKMLVLDKLLAKLREQGSRVLLFSQM 435
>gi|50414862|gb|AAH77794.1| HELLS protein [Xenopus laevis]
Length = 756
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
+ +I++ RKCC+HPYL++ L L ++ ++ E L V +SGK LLD +L E+K +G
Sbjct: 563 MRNIMMLLRKCCNHPYLIEYPLDP-LTQNFKIDEEL---VNSSGKFLLLDRLLPEMKKRG 618
Query: 186 SRVIILFQILII 197
+V+I Q+ ++
Sbjct: 619 HKVLIFSQMTMM 630
>gi|297791319|ref|XP_002863544.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp.
lyrata]
gi|297309379|gb|EFH39803.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp.
lyrata]
Length = 2251
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV+++++Q E Y +L+K+ + L+N GV +I++ RK C+HPYL
Sbjct: 929 TERMVPVELTSIQAE-YYRAMLTKNYQI---LRNIGKGVAQQSMLNIVMQLRKVCNHPYL 984
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + + E+L D+ +KAS KL LL +ML L+ +G RV+I Q+
Sbjct: 985 IPGT-----EPESGSLEFLHDMRIKASAKLTLLHSMLKVLQKEGHRVLIFSQM 1032
>gi|326924536|ref|XP_003208483.1| PREDICTED: probable global transcription activator SNF2L1-like
[Meleagris gallopavo]
Length = 1043
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 397 EVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 455
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D L + SGK+ +LD +L++L+ QGSRV++ Q+
Sbjct: 456 PGPPYTTDTHL-------ITNSGKMLVLDKLLAKLREQGSRVLLFSQM 496
>gi|255565329|ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis]
gi|223537108|gb|EEF38742.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis]
Length = 2257
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E +PV+++++Q E Y L L + K P + +I++ RK C+HPYL+ +
Sbjct: 908 TERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVPQQSMLNIVMQLRKICNHPYLIPGT 967
Query: 147 LQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D E+L ++ +KAS KL +L +ML L +G RV+I Q+
Sbjct: 968 -----EPDSGSVEFLHEMRIKASAKLTVLHSMLKALYKEGHRVLIFSQM 1011
>gi|148697110|gb|EDL29057.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_c [Mus
musculus]
Length = 1087
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 457 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 515
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ LD +L+ +K QGSRV+I Q+
Sbjct: 516 PG---PPYTTDEHI---VGNSGKMVALDKLLARIKEQGSRVLIFSQM 556
>gi|242023690|ref|XP_002432264.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus
humanus corporis]
gi|212517673|gb|EEB19526.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus
humanus corporis]
Length = 1999
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 946 EFIVRVELSPMQ-KKYYKWILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFSAAA 1004
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + E L +KASGKL LL ML L+ QG RV+I Q+
Sbjct: 1005 EEAPLSANGTYE-LQGLIKASGKLILLSKMLKLLREQGHRVLIFSQM 1050
>gi|115491355|ref|XP_001210305.1| hypothetical protein ATEG_00219 [Aspergillus terreus NIH2624]
gi|114197165|gb|EAU38865.1| hypothetical protein ATEG_00219 [Aspergillus terreus NIH2624]
Length = 1459
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S++QLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 668 EKIIRVELSDIQLEYYKNILTKNYAALNEGTKGQKQSLL-NIMMELKKASNHPFMFPNAE 726
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 727 ARILEGSTRREDILRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 774
>gi|431838964|gb|ELK00893.1| Lymphoid-specific helicase [Pteropus alecto]
Length = 846
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 65 GSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCS---PLKND 121
G K +T K + Y DS +E I S +Q E L + ++ PL+++
Sbjct: 513 GRPKRRTRKLINYSEVDDSPNELEKLI----SQIQPE------LDRERAVVEVNIPLESE 562
Query: 122 PVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSEL 181
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML +L
Sbjct: 563 VNLKLQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKVDEEL---VTNSGKFLILDRMLPKL 618
Query: 182 KNQGSRVIILF 192
K +G +V++LF
Sbjct: 619 KTRGHKVVLLF 629
>gi|121701939|ref|XP_001269234.1| chromodomain helicase (Chd1), putative [Aspergillus clavatus NRRL
1]
gi|119397377|gb|EAW07808.1| chromodomain helicase (Chd1), putative [Aspergillus clavatus NRRL
1]
Length = 1506
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 666 EKIIRVELSDVQLEYYKNILTKNYAALNDGAKGQKQSLL-NIMMELKKASNHPFMFPNAE 724
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 725 ARILEGSTRREDILRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 772
>gi|148697109|gb|EDL29056.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_b [Mus
musculus]
Length = 1110
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 464 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 522
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ LD +L+ +K QGSRV+I Q+
Sbjct: 523 PG---PPYTTDEHI---VGNSGKMVALDKLLARIKEQGSRVLIFSQM 563
>gi|148697108|gb|EDL29055.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_a [Mus
musculus]
Length = 1103
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 457 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 515
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ LD +L+ +K QGSRV+I Q+
Sbjct: 516 PG---PPYTTDEHI---VGNSGKMVALDKLLARIKEQGSRVLIFSQM 556
>gi|116283949|gb|AAH16071.1| Smarca1 protein [Mus musculus]
Length = 1032
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 416 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 474
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ LD +L+ +K QGSRV+I Q+
Sbjct: 475 PG---PPYTTDEHI---VGNSGKMVALDKLLARIKEQGSRVLIFSQM 515
>gi|262050608|ref|NP_444353.3| probable global transcription activator SNF2L1 [Mus musculus]
gi|81911462|sp|Q6PGB8.1|SMCA1_MOUSE RecName: Full=Probable global transcription activator SNF2L1;
AltName: Full=ATP-dependent helicase SMARCA1; AltName:
Full=DNA-dependent ATPase SNF2L; AltName:
Full=Nucleosome-remodeling factor subunit SNF2L;
AltName: Full=SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 1
gi|34783716|gb|AAH57115.1| Smarca1 protein [Mus musculus]
Length = 1046
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 416 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 474
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ LD +L+ +K QGSRV+I Q+
Sbjct: 475 PG---PPYTTDEHI---VGNSGKMVALDKLLARIKEQGSRVLIFSQM 515
>gi|148232962|ref|NP_001086442.1| helicase, lymphoid-specific [Xenopus laevis]
gi|66911167|gb|AAH97562.1| HELLS protein [Xenopus laevis]
Length = 838
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
+ +I++ RKCC+HPYL++ L L ++ ++ E L V +SGK LLD +L E+K +G
Sbjct: 563 MRNIMMLLRKCCNHPYLIEYPLDP-LTQNFKIDEEL---VNSSGKFLLLDRLLPEMKKRG 618
Query: 186 SRVIILFQILII 197
+V+I Q+ ++
Sbjct: 619 HKVLIFSQMTMM 630
>gi|195128581|ref|XP_002008741.1| GI13663 [Drosophila mojavensis]
gi|193920350|gb|EDW19217.1| GI13663 [Drosophila mojavensis]
Length = 1992
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 34/184 (18%)
Query: 17 SREKLD------GELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEK 70
SREK + GE D S +Q H M H R L D + N+ S E
Sbjct: 913 SREKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLR-------RLKTDVLKNMPSKSE- 964
Query: 71 TSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDIL 130
+ + V++S +Q +++ +L+K+ + L +I+
Sbjct: 965 ------------------FIVRVELSAMQ-KKFYKFILTKNYEALNSKSGGGSCSLINIM 1005
Query: 131 ISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVII 190
+ +KCC+HPYL + + E ++ KA+GKL LL ML +LK QG RV+I
Sbjct: 1006 MDLKKCCNHPYLFPSGSEDAPTSAGGIYE-INSLTKAAGKLVLLSKMLKQLKAQGHRVLI 1064
Query: 191 LFQI 194
Q+
Sbjct: 1065 FSQM 1068
>gi|388580068|gb|EIM20386.1| hypothetical protein WALSEDRAFT_33426 [Wallemia sebi CBS 633.66]
Length = 1402
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S++Q Y L +L S P + +I RK +HPYL D + S+
Sbjct: 629 VELSSLQTHYYRNILTKNFTALKSSEGGGPAMSMMNIANDLRKASNHPYLFDGAEGSINA 688
Query: 153 KDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
KD E L V SGK+ LLD +L+ LK G RV+I Q++
Sbjct: 689 KD----EVLRGIVMNSGKMVLLDKLLARLKADGHRVLIFSQMV 727
>gi|14028667|gb|AAK52453.1|AF325920_1 DNA-dependent ATPase SNF2L [Mus musculus]
Length = 1064
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 417 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 475
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ LD +L+ +K QGSRV+I Q+
Sbjct: 476 PG---PPYTTDEHI---VGNSGKMVALDKLLARIKEQGSRVLIFSQM 516
>gi|417407024|gb|JAA50147.1| Putative chromatin remodeling complex wstf-iswi small subunit
[Desmodus rotundus]
Length = 2606
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLS-LCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S L + V L + ++ RKCC+HPYL+ +
Sbjct: 1118 ETIIEVELTNIQ-KKYYRAILEKNFSFLAKGVGQTNVPNLVNTMMELRKCCNHPYLIKGA 1176
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1177 EEKILGEFRETYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1231
>gi|383851360|ref|XP_003701201.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Megachile rotundata]
Length = 1967
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 964 EFIVRVELSPMQ-KKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAS 1022
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Q E + +KA+GKL LL ML +L++ G RV+I Q+
Sbjct: 1023 QEAPTAPNGTYETSAL-IKAAGKLVLLSKMLRKLRDDGHRVLIFSQM 1068
>gi|449471687|ref|XP_002197759.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Taeniopygia
guttata]
Length = 1794
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 676 VEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 734
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ LE + L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 735 EENERENGLETLQSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 782
>gi|391870009|gb|EIT79197.1| putative helicase [Aspergillus oryzae 3.042]
Length = 1455
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 14/119 (11%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPL---KNDPVGV-------LHDILISARKC 136
V+ +PV +S VQ + Y ++L+K+ L + KND G L++IL+ RKC
Sbjct: 860 VQIIVPVSMSVVQKKLY-KSILAKNPQLIKAIFQRKNDNRGPKQAERQNLNNILMQLRKC 918
Query: 137 CDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
HP++ +++ ++L V+A+GKLQLL ML +L+ +G RV+I Q L
Sbjct: 919 LCHPFIYSTAIEERTNNATASHKHL---VEAAGKLQLLQLMLPKLRERGHRVLIFSQFL 974
>gi|313217669|emb|CBY38714.1| unnamed protein product [Oikopleura dioica]
Length = 882
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV----DKS 146
I V+++N+Q + Y L L V L + ++ RKCC+HP+L+ DK
Sbjct: 671 IEVELTNIQKKYYRAILERNFDFLSKGASTGNVPSLMNTMMELRKCCNHPFLIKGAEDKI 730
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
+ K E+A+ L V+ASGK+ L+ +L +LK G +V+I Q++ +
Sbjct: 731 IDEYRAKG-EVADPLTSIVQASGKMVLIHKLLPKLKAGGHKVLIFSQMIRV 780
>gi|170085497|ref|XP_001873972.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82]
gi|164651524|gb|EDR15764.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82]
Length = 1754
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSL----CSPLKNDPV--GVLHDILISARKCCDHPY 141
E IPV ++ +Q E Y ++LS +L L P P G L++IL+ RKC HPY
Sbjct: 1097 EVIIPVSMAPLQKEVY-RSILSHNLELLKGLTQPKFGGPTTKGRLNNILMHLRKCLQHPY 1155
Query: 142 LVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILIIRAKV 201
L + ++ + E E L + S KL+ L +L +LK +G RV +LF +I V
Sbjct: 1156 LYAEDIEPRGLPPQETHEKL---IDGSAKLRFLKALLPKLKARGHRV-LLFSQFVIALNV 1211
Query: 202 CENEILG 208
E+ + G
Sbjct: 1212 IEDFLQG 1218
>gi|83764573|dbj|BAE54717.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1455
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 14/119 (11%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPL---KNDPVGV-------LHDILISARKC 136
V+ +PV +S VQ + Y ++L+K+ L + KND G L++IL+ RKC
Sbjct: 860 VQIIVPVSMSVVQKKLY-KSILAKNPQLIKAIFQRKNDNQGPKQAERQNLNNILMQLRKC 918
Query: 137 CDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
HP++ +++ ++L V+A+GKLQLL ML +L+ +G RV+I Q L
Sbjct: 919 LCHPFIYSTAIEERTNNATASHKHL---VEAAGKLQLLQLMLPKLRERGHRVLIFSQFL 974
>gi|238504250|ref|XP_002383356.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus
flavus NRRL3357]
gi|220690827|gb|EED47176.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus
flavus NRRL3357]
Length = 1455
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 14/119 (11%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPL---KNDPVGV-------LHDILISARKC 136
V+ +PV +S VQ + Y ++L+K+ L + KND G L++IL+ RKC
Sbjct: 860 VQIIVPVSMSVVQKKLY-KSILAKNPQLIKAIFQRKNDNQGPKQAERQNLNNILMQLRKC 918
Query: 137 CDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
HP++ +++ ++L V+A+GKLQLL ML +L+ +G RV+I Q L
Sbjct: 919 LCHPFIYSTAIEERTNNATASHKHL---VEAAGKLQLLQLMLPKLRERGHRVLIFSQFL 974
>gi|389641265|ref|XP_003718265.1| chromodomain helicase DNA binding protein 1 [Magnaporthe oryzae
70-15]
gi|351640818|gb|EHA48681.1| chromodomain helicase DNA binding protein 1 [Magnaporthe oryzae
70-15]
Length = 1649
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 14/144 (9%)
Query: 62 DNLGSLKEKTSKYVAYGGKLDSSRFV----EYWIPVQISNVQLEQYCGTLLSKSLSLCSP 117
+N+ L ++ Y K + +F+ + +PV +S VQ E+ C ++++KS L
Sbjct: 1039 ENIPQLHDEIKPYFLRRTKAEVLKFLPPMGQVIVPVTMSFVQ-EKLCKSIMTKSPQLIQA 1097
Query: 118 L--KND----PVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKL 171
+ KN G L++IL+ RKC HP++ + ++ + + L ++AS KL
Sbjct: 1098 IFAKNKMGVKERGSLNNILMQLRKCLCHPFVYSRDVEDTTLDPETMQRNL---IEASPKL 1154
Query: 172 QLLDTMLSELKNQGSRVIILFQIL 195
LL ML +LK +G RV+I Q L
Sbjct: 1155 VLLSRMLPKLKEKGHRVLIFSQFL 1178
>gi|406868739|gb|EKD21776.1| SNF2 family domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1781
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 62 DNLGSLKEKTSKYVAYGGKLDSSRFV----EYWIPVQISNVQLEQYCGTLLSKSLSL--- 114
+NL L E + KL +F+ + +PV +S VQ + Y ++L++S L
Sbjct: 1022 ENLPELHELIRPFFLRRTKLQVLKFLPPMAQVILPVSMSVVQKKLY-KSILARSPELIKS 1080
Query: 115 -----CSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASG 169
+ LK G L++IL+ RKC HP+L +++ + D + + V+AS
Sbjct: 1081 ILGQSSTVLKPKERGNLNNILMQLRKCLCHPFLYSSAIEEVSKTDTADDVHSKL-VEASS 1139
Query: 170 KLQLLDTMLSELKNQGSRVIILFQILI 196
K QLL ML +L+++G RV++ Q L+
Sbjct: 1140 KFQLLKIMLPKLRDRGHRVLLFSQFLM 1166
>gi|336464523|gb|EGO52763.1| hypothetical protein NEUTE1DRAFT_54802 [Neurospora tetrasperma FGSC
2508]
Length = 1664
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQL+ Y +L+++ + S N L +I++ +K +HPY+ +
Sbjct: 705 EKIIRVELSDVQLDYY-KNILTRNYAALSDASNGHKQSLLNIMMELKKVSNHPYMFQGAE 763
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + +SGK+ LLD +L++L+ G RV+I Q++
Sbjct: 764 ERVLNGSTRREDQIKGLITSSGKMMLLDQLLAKLRKDGHRVLIFSQMV 811
>gi|164427331|ref|XP_963868.2| hypothetical protein NCU03060 [Neurospora crassa OR74A]
gi|157071698|gb|EAA34632.2| hypothetical protein NCU03060 [Neurospora crassa OR74A]
Length = 1664
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQL+ Y +L+++ + S N L +I++ +K +HPY+ +
Sbjct: 705 EKIIRVELSDVQLDYY-KNILTRNYAALSDASNGHKQSLLNIMMELKKVSNHPYMFQGAE 763
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + +SGK+ LLD +L++L+ G RV+I Q++
Sbjct: 764 ERVLNGSTRREDQIKGLITSSGKMMLLDQLLAKLRKDGHRVLIFSQMV 811
>gi|313217104|emb|CBY38281.1| unnamed protein product [Oikopleura dioica]
Length = 1430
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV----DKS 146
I V+++N+Q + Y L L V L + ++ RKCC+HP+L+ DK
Sbjct: 671 IEVELTNIQKKYYRAILERNFDFLSKGASTGNVPSLMNTMMELRKCCNHPFLIKGAEDKI 730
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
+ K E+A+ L V+ASGK+ L+ +L +LK G +V+I Q++ +
Sbjct: 731 IDEYRAKG-EVADPLTSIVQASGKMVLIHKLLPKLKAGGHKVLIFSQMIRV 780
>gi|119570423|gb|EAW50038.1| helicase, lymphoid-specific, isoform CRA_m [Homo sapiens]
Length = 874
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDPV-TQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 615
Query: 186 SRVIILF 192
+V++LF
Sbjct: 616 HKVVLLF 622
>gi|327285131|ref|XP_003227288.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Anolis
carolinensis]
Length = 2471
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 66/116 (56%), Gaps = 9/116 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S + + L + ++ RKCC+HPYL++ +
Sbjct: 1025 ETIIEVELTNIQ-KKYYRAILEKNFNFLSKGAGHSNMPNLLNTMMELRKCCNHPYLINGA 1083
Query: 147 LQSLLVKDLELAEY-------LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + L V++SGKL L+D +L +LK G +V+I Q++
Sbjct: 1084 EEKILTEFRDSCHHHVPHDFPLQAMVRSSGKLVLIDKLLPKLKAGGHKVLIFSQMV 1139
>gi|119570411|gb|EAW50026.1| helicase, lymphoid-specific, isoform CRA_a [Homo sapiens]
Length = 870
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDPV-TQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 615
Query: 186 SRVIILF 192
+V++LF
Sbjct: 616 HKVVLLF 622
>gi|350296614|gb|EGZ77591.1| hypothetical protein NEUTE2DRAFT_134735 [Neurospora tetrasperma
FGSC 2509]
Length = 1664
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQL+ Y +L+++ + S N L +I++ +K +HPY+ +
Sbjct: 705 EKIIRVELSDVQLDYY-KNILTRNYAALSDASNGHKQSLLNIMMELKKVSNHPYMFQGAE 763
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + +SGK+ LLD +L++L+ G RV+I Q++
Sbjct: 764 ERVLNGSTRREDQIKGLITSSGKMMLLDQLLAKLRKDGHRVLIFSQMV 811
>gi|358388667|gb|EHK26260.1| hypothetical protein TRIVIDRAFT_35958 [Trichoderma virens Gv29-8]
Length = 1359
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 14/144 (9%)
Query: 62 DNLGSLKEKTSKYVAYGGKLDSSRFV----EYWIPVQISNVQLEQYCGTLLSKSLSLC-- 115
DNL L EK Y KL +F+ + +PV ++ +Q E+ ++++K+ L
Sbjct: 885 DNLPKLHEKIRPYFLRRTKLGVLKFLPPMAQIILPVTMTVIQ-EKLSKSIMAKNPQLIRA 943
Query: 116 ----SPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKL 171
S + G L++IL+ RKC HP++ ++++ L L V+AS KL
Sbjct: 944 VFAKSKMNAKDRGSLNNILMQLRKCLCHPFMYSEAIEERHHDPKVLHRNL---VEASAKL 1000
Query: 172 QLLDTMLSELKNQGSRVIILFQIL 195
LL+ ML +LK +G RV+I Q L
Sbjct: 1001 LLLEIMLPKLKERGHRVLIFSQFL 1024
>gi|119570419|gb|EAW50034.1| helicase, lymphoid-specific, isoform CRA_i [Homo sapiens]
Length = 839
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDPV-TQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 615
Query: 186 SRVIILF 192
+V++LF
Sbjct: 616 HKVVLLF 622
>gi|26326731|dbj|BAC27109.1| unnamed protein product [Mus musculus]
Length = 1046
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 416 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLL-NILMHLRKCCNHPYLFDGAE 474
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V SGK+ LD +L+ +K QGSRV+I Q+
Sbjct: 475 PG---PPYTTDEHI---VGNSGKMVALDKLLARIKEQGSRVLIFSQM 515
>gi|389631921|ref|XP_003713613.1| chromodomain helicase DNA binding protein [Magnaporthe oryzae
70-15]
gi|351645946|gb|EHA53806.1| chromodomain helicase DNA binding protein [Magnaporthe oryzae
70-15]
gi|440467885|gb|ELQ37079.1| chromodomain helicase hrp3 [Magnaporthe oryzae Y34]
gi|440478631|gb|ELQ59450.1| chromodomain helicase hrp3 [Magnaporthe oryzae P131]
Length = 1683
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y +L+++ + S L +I++ +K +HPY+
Sbjct: 701 EKIIRVELSDVQLEYY-KNILTRNYAALSDASGGHKASLLNIMMELKKVSNHPYMFQGVE 759
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +K+SGK+ LLD +L++LK RV+I Q++
Sbjct: 760 ERVLAGSTRREDSIKGLIKSSGKMMLLDQLLAKLKKDNHRVLIFSQMV 807
>gi|291239125|ref|XP_002739475.1| PREDICTED: kismet-like, partial [Saccoglossus kowalevskii]
Length = 1069
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLK--NDPVGVLHDILISARKCCDHPYLVDKSLQ 148
I V+++N+Q ++Y +L ++ S + N V L + ++ RKCC+HP+L++ + +
Sbjct: 26 IEVELTNIQ-KKYYRAILERNFSFLAKGSGSNANVPNLMNTMMELRKCCNHPFLINGAEE 84
Query: 149 SLLVKDLELAEYLD---VGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+++ D YL ++++GK+ L+D +L +LK G +V+I Q++
Sbjct: 85 QIML-DFPENNYLRQLLALIQSAGKMVLIDKLLPKLKEGGHKVLIFSQMV 133
>gi|327281454|ref|XP_003225463.1| PREDICTED: lymphoid-specific helicase-like [Anolis carolinensis]
Length = 811
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 65 GSLKEKTSKYVAYG--GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP 122
G K + K V+Y G+ DS +E I V+ E+ + + PL ++
Sbjct: 477 GRPKRRNRKLVSYRELGENDSPDELESLINKMRYEVEKER------RPVIEMNMPLDSEV 530
Query: 123 VGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELK 182
L +I++ RKCC+HPYL++ L+ + ++ E L V +SGK LLD ML ELK
Sbjct: 531 NIKLQNIMMLLRKCCNHPYLIEYPLEP-GTQQFKVDEDL---VNSSGKFLLLDRMLPELK 586
Query: 183 NQGSRVIILFQI 194
+G +V++ Q+
Sbjct: 587 KRGHKVLLFSQM 598
>gi|26348885|dbj|BAC38082.1| unnamed protein product [Mus musculus]
Length = 891
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S + N V L + ++ RKCC+HPYL++ + +
Sbjct: 698 IEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNVPNLINTMMELRKCCNHPYLINGAEEK 756
Query: 150 LLVKDLELAE-------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L +D A L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 757 IL-EDFRKAHSSEASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 808
>gi|224004070|ref|XP_002295686.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585718|gb|ACI64403.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 338
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 37 YHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFV----EYWIP 92
+ ++ E GD+ K+ + L E ++ K D + V E I
Sbjct: 74 FEDVDEFMEQYGDIRSKE--------KVDELHETIRPFILRRLKEDVEKSVPPKEETLIE 125
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG-VLHDILISARKCCDHPYLVDKSLQSLL 151
V+++ +Q +QY L K+L K G ++++ + RKCC+HP+L+ ++S +
Sbjct: 126 VELTVLQ-KQYYRALYEKNLKFLHRGKKPLDGPSINNLAMQLRKCCNHPFLL-TGVESEV 183
Query: 152 VKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
E +D+ V+ASGKL LLD +L LK G R+++ Q I+
Sbjct: 184 RLQQPNKEIVDLMVEASGKLVLLDKLLPRLKADGHRILLFSQFKIM 229
>gi|158300661|ref|XP_320523.4| AGAP012009-PA [Anopheles gambiae str. PEST]
gi|157013268|gb|EAA00692.4| AGAP012009-PA [Anopheles gambiae str. PEST]
Length = 2037
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 1016 EFIVRVELSPLQ-KKYYKYILTRNYEALNPKGGGGACSLINIMMDLKKCCNHPYLFAAAA 1074
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + E L KA+GKL LL+ ML LK+QG RV+I Q+
Sbjct: 1075 EEAQLGPGGNYE-LQSLTKAAGKLVLLEKMLRLLKSQGHRVLIFSQM 1120
>gi|440466839|gb|ELQ36083.1| chromodomain-helicase-DNA-binding protein 3 [Magnaporthe oryzae Y34]
gi|440481988|gb|ELQ62517.1| chromodomain-helicase-DNA-binding protein 3 [Magnaporthe oryzae P131]
Length = 1685
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 10/111 (9%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPL--KND----PVGVLHDILISARKCCDHPYLVD 144
+PV +S VQ E+ C ++++KS L + KN G L++IL+ RKC HP++
Sbjct: 1072 VPVTMSFVQ-EKLCKSIMTKSPQLIQAIFAKNKMGVKERGSLNNILMQLRKCLCHPFVYS 1130
Query: 145 KSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ ++ + + L ++AS KL LL ML +LK +G RV+I Q L
Sbjct: 1131 RDVEDTTLDPETMQRNL---IEASPKLVLLSRMLPKLKEKGHRVLIFSQFL 1178
>gi|68059048|ref|XP_671503.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487742|emb|CAH95874.1| hypothetical protein PB000382.01.0 [Plasmodium berghei]
Length = 324
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 13/109 (11%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E +I V +S +Q + Y +LSK++ + + + +L +IL+ RKCC+HPYL D
Sbjct: 187 EIYIFVGMSKLQKKLYSD-ILSKNIDVINAMTGSKNQML-NILMQLRKCCNHPYLFD--- 241
Query: 148 QSLLVKDLELAEYLDVG--VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+E Y++ ++ SGK+ LLD +L LK + SRV++ Q+
Sbjct: 242 ------GIEEPPYIEGNHLIETSGKMSLLDKLLPRLKKENSRVLLFSQM 284
>gi|195020242|ref|XP_001985154.1| GH16907 [Drosophila grimshawi]
gi|193898636|gb|EDV97502.1| GH16907 [Drosophila grimshawi]
Length = 2013
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 19 EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYG 78
+ GE D S +Q H M H R L D + N+ S E
Sbjct: 929 QAFQGEFADVSKEEQVKRLHEMLGPHMLR-------RLKTDVLKNMPSKSE--------- 972
Query: 79 GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
+ + V++S +Q +++ +L+K+ + L +I++ +KCC+
Sbjct: 973 ----------FIVRVELSAMQ-KKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCN 1021
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HPYL + + + E L + KA+GKL LL ML +LK+Q RV+I Q+
Sbjct: 1022 HPYLFPSASEEAPTSAGGIYELLSL-TKAAGKLVLLSKMLKQLKSQNHRVLIFSQM 1076
>gi|268564215|ref|XP_002639045.1| C. briggsae CBR-TAG-192 protein [Caenorhabditis briggsae]
Length = 2869
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 12/116 (10%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I VQ+S++Q + Y L LC K L ++++ RKCC+HP+L++ +
Sbjct: 1362 ETIIEVQLSDMQKKFYRAILERNFSHLC---KGTSAPSLMNVMMELRKCCNHPFLINGAE 1418
Query: 148 QSLLVKDLELA------EYL--DVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++++ D LA E L V+ASGK+ L++ +L +L+ G +V+I Q++
Sbjct: 1419 ETIM-NDFRLAHPDWDDETLAQKALVQASGKVVLIEKLLPKLRKDGHKVLIFSQMV 1473
>gi|340372667|ref|XP_003384865.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Amphimedon queenslandica]
Length = 1669
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
Query: 63 NLGSLKEKTSKYVAYGGKLDSSRF----VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPL 118
NL SL ++ Y+ K D + VE + V++S+VQ + Y L +L +
Sbjct: 798 NLSSLHQQLEPYLLRRIKKDVEKSLPSKVEQILRVEMSSVQKQYYRWILTRNYKALSKGV 857
Query: 119 KNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTML 178
K G + ++L+ +KCC+H Y+V ++ + VKD L ++ SGKL LLD +L
Sbjct: 858 KGSITGFI-NVLMELKKCCNHVYIV-RTPDTPEVKDP-----LQSLLRGSGKLYLLDKLL 910
Query: 179 SELKNQGSRVIILFQIL 195
LK +G RV+I Q++
Sbjct: 911 VRLKEKGHRVLIFSQMV 927
>gi|242045708|ref|XP_002460725.1| hypothetical protein SORBIDRAFT_02g033850 [Sorghum bicolor]
gi|241924102|gb|EER97246.1| hypothetical protein SORBIDRAFT_02g033850 [Sorghum bicolor]
Length = 614
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E +PV+++++Q E Y L L + K L +I++ RK C+HPYL+ +
Sbjct: 211 TERMVPVELTSIQAEYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPGT 270
Query: 147 LQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ E+L D+ +KAS KL LL +ML L +G RV+I Q+
Sbjct: 271 -----EPESGSPEFLHDMRIKASAKLALLHSMLKILHKEGHRVLIFSQM 314
>gi|195166785|ref|XP_002024215.1| GL22908 [Drosophila persimilis]
gi|194107570|gb|EDW29613.1| GL22908 [Drosophila persimilis]
Length = 1898
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 19 EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYG 78
+ GE D S +Q H M H R L D + N+ S
Sbjct: 794 QAFQGEFADVSKEEQVKRLHEMLGPHMLR-------RLKTDVLKNMPS------------ 834
Query: 79 GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
S F+ + V++S +Q +++ +L+K+ + L +I++ +KCC+
Sbjct: 835 ----KSEFI---VRVELSAMQ-KKFYKFILTKNYEALNSKTGGGSCSLINIMMDLKKCCN 886
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HPYL + + L E ++ KA+GKL LL ML +LK+Q RV+I Q+
Sbjct: 887 HPYLFPSAAEEAQTAAGGLYE-INSLTKAAGKLVLLSKMLRQLKSQNHRVLIFSQM 941
>gi|358372937|dbj|GAA89538.1| chromodomain helicase [Aspergillus kawachii IFO 4308]
Length = 1504
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L + +L +I++ +K +HP++ +
Sbjct: 668 EKIIRVELSDVQLEYYKNILTKNYAALNDGARGQKQSLL-NIMMELKKASNHPFMFPNAE 726
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 727 ARILEGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 774
>gi|317030844|ref|XP_001392337.2| chromodomain helicase (Chd1) [Aspergillus niger CBS 513.88]
gi|350629509|gb|EHA17882.1| hypothetical protein ASPNIDRAFT_55859 [Aspergillus niger ATCC 1015]
Length = 1516
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L + +L +I++ +K +HP++ +
Sbjct: 679 EKIIRVELSDVQLEYYKNILTKNYAALNDGARGQKQSLL-NIMMELKKASNHPFMFPNAE 737
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 738 ARILEGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 785
>gi|134076845|emb|CAK45266.1| unnamed protein product [Aspergillus niger]
Length = 1504
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L + +L +I++ +K +HP++ +
Sbjct: 667 EKIIRVELSDVQLEYYKNILTKNYAALNDGARGQKQSLL-NIMMELKKASNHPFMFPNAE 725
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 726 ARILEGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 773
>gi|340726708|ref|XP_003401695.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein Mi-2 homolog [Bombus terrestris]
Length = 1974
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 972 EFIVRVELSPMQ-KKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAS 1030
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Q E + +KA+GKL LL ML +L++ G RV+I Q+
Sbjct: 1031 QEAPTAPNGSYETSAL-IKAAGKLVLLSKMLKKLRDDGHRVLIFSQM 1076
>gi|189521245|ref|XP_696641.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Danio rerio]
Length = 2063
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 996 ELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1052
Query: 148 QSLLVKDLELAEYLDVGV-KASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ Y VG+ KASGKL LL ML +LK QG RV++ Q+
Sbjct: 1053 AAAEAPKTPSGAYEGVGLTKASGKLMLLQKMLRKLKEQGHRVLVFSQM 1100
>gi|2660669|gb|AAC79140.1| human Mi-2 autoantigen-like protein [Arabidopsis thaliana]
gi|9758384|dbj|BAB08833.1| helicase-like protein [Arabidopsis thaliana]
Length = 2228
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV+++++Q E Y +L+K+ + L+N GV +I++ RK C+HPYL
Sbjct: 912 TERMVPVELTSIQAE-YYRAMLTKNYQI---LRNIGKGVAQQSMLNIVMQLRKVCNHPYL 967
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + + E+L D+ +KAS KL LL +ML L +G RV+I Q+
Sbjct: 968 IPGT-----EPESGSLEFLHDMRIKASAKLTLLHSMLKVLHKEGHRVLIFSQM 1015
>gi|301607806|ref|XP_002933489.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Xenopus (Silurana) tropicalis]
Length = 1708
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S Q + Y L +L K G L +I++ +KCC+H YL+
Sbjct: 621 VEQILRVEMSASQKQYYKWILTRNYKALSKGSKGSTSGFL-NIMMELKKCCNHCYLIKPP 679
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E ++L +++SGKL LLD +L L+ +G+RV+I Q++ +
Sbjct: 680 EENEFYNRQEALQHL---IRSSGKLILLDKLLVRLRERGNRVLIFSQMVRM 727
>gi|346974879|gb|EGY18331.1| chromo domain-containing protein [Verticillium dahliae VdLs.17]
Length = 1735
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
Query: 63 NLGSLKEKTSKYVAYGGKLDSSRFV----EYWIPVQISNVQLEQYCGTLLSKSLSLCSPL 118
NL L EK Y K +F+ + +PV ++ +Q E+ C ++++KS L +
Sbjct: 1007 NLPKLHEKIRPYFLRRTKAQVLKFLPPMAQIILPVSMTILQ-EKLCKSIMAKSPELIKAI 1065
Query: 119 ------KNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQ 172
K G L++IL+ RKC HP++ ++++ + L + AS KL
Sbjct: 1066 FADDKIKTKDRGSLNNILMQLRKCLAHPFIYSQAIEERSDDPIVTQRNL---ISASAKLL 1122
Query: 173 LLDTMLSELKNQGSRVIILFQIL 195
LL+ ML +LK +G RV++ Q L
Sbjct: 1123 LLEIMLPKLKERGHRVLLFSQFL 1145
>gi|121708629|ref|XP_001272195.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus
clavatus NRRL 1]
gi|119400343|gb|EAW10769.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus
clavatus NRRL 1]
Length = 1522
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 14/120 (11%)
Query: 86 FVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPL--KND-PVGV-------LHDILISARK 135
V+ +PV +S +Q + Y ++L+K+ L + +ND P G+ L++IL+ RK
Sbjct: 917 MVQIIVPVSMSILQKKLY-KSILAKNPQLIKAIFQRNDGPQGIKQAERHNLNNILMQLRK 975
Query: 136 CCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
C HP++ ++++ +L +ASGKLQLL ML +LK +G RV+I Q L
Sbjct: 976 CLCHPFVYSEAIEERTSNATVSQRHL---TEASGKLQLLQIMLPKLKERGHRVLIFSQFL 1032
>gi|350424653|ref|XP_003493868.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Bombus impatiens]
Length = 1965
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 963 EFIVRVELSPMQ-KKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAS 1021
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Q E + +KA+GKL LL ML +L++ G RV+I Q+
Sbjct: 1022 QEAPTAPNGSYETSAL-IKAAGKLVLLSKMLKKLRDDGHRVLIFSQM 1067
>gi|363737795|ref|XP_413879.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2 [Gallus gallus]
Length = 1837
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 716 VEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 774
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ +E + L +++SGKL LLD +L+ L+++G+RV+I Q++ +
Sbjct: 775 EENERENGIETLQSL---IRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRM 822
>gi|334188199|ref|NP_199293.3| chromatin remodeling 4 protein [Arabidopsis thaliana]
gi|332007781|gb|AED95164.1| chromatin remodeling 4 protein [Arabidopsis thaliana]
Length = 2223
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV+++++Q E Y +L+K+ + L+N GV +I++ RK C+HPYL
Sbjct: 926 TERMVPVELTSIQAE-YYRAMLTKNYQI---LRNIGKGVAQQSMLNIVMQLRKVCNHPYL 981
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + + E+L D+ +KAS KL LL +ML L +G RV+I Q+
Sbjct: 982 IPGT-----EPESGSLEFLHDMRIKASAKLTLLHSMLKVLHKEGHRVLIFSQM 1029
>gi|224125208|ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222871157|gb|EEF08288.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 2332
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV++S++Q E Y +L+K+ + L+N GV +I++ RK C+HPYL
Sbjct: 984 TERMVPVELSSIQAE-YYRAMLTKNYQM---LRNIGKGVAQQSMLNIVMQLRKICNHPYL 1039
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + D E+L ++ +KAS KL LL +ML L +G RV+I Q+
Sbjct: 1040 IPGT-----EPDSGSLEFLHEMRIKASAKLTLLHSMLKILYKEGHRVLIFSQM 1087
>gi|195496103|ref|XP_002095551.1| GE22457 [Drosophila yakuba]
gi|194181652|gb|EDW95263.1| GE22457 [Drosophila yakuba]
Length = 1982
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 19 EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYG 78
+ GE D S +Q H M H R L D + N+ S E
Sbjct: 930 QAFQGEFADVSKEEQVKRLHEMLGPHMLR-------RLKTDVLKNMPSKSE--------- 973
Query: 79 GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
+ + V++S +Q +++ +L+K+ + L +I++ +KCC+
Sbjct: 974 ----------FIVRVELSAMQ-KKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCN 1022
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HPYL + + L E ++ KA+GKL LL ML +LK+Q RV+I Q+
Sbjct: 1023 HPYLFPSAAEEATTSAGGLYE-INSLTKAAGKLVLLSKMLKQLKSQNHRVLIFSQM 1077
>gi|380020464|ref|XP_003694103.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein Mi-2 homolog [Apis florea]
Length = 1964
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 962 EFIVRVELSPMQ-KKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAS 1020
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Q E + +KA+GKL LL ML +L++ G RV+I Q+
Sbjct: 1021 QEAPTAPNGSYETSAL-IKAAGKLVLLSKMLKKLRDDGHRVLIFSQM 1066
>gi|118344288|ref|NP_001071967.1| SWI/SNF protein [Ciona intestinalis]
gi|70571306|dbj|BAE06719.1| Ci-SWI/SNF [Ciona intestinalis]
Length = 1003
Score = 53.9 bits (128), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 95 ISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKD 154
+S +Q E Y L+ + + + D V +L +IL+ RKCC+HPYL D +
Sbjct: 368 LSKMQREWYTKILVKDIDIINAAGRTDRVRLL-NILMQLRKCCNHPYLFDGAEPG---PP 423
Query: 155 LELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCENEILGYC 210
+E+L V SGKL +LD +L + + QG RV+I Q IL I C YC
Sbjct: 424 YTTSEHLVVN---SGKLSVLDKLLPKFQEQGDRVLIFSQMTRILDILEDYCMWRGYNYC 479
>gi|326926799|ref|XP_003209584.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Meleagris gallopavo]
Length = 1837
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 716 VEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 774
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ +E + L +++SGKL LLD +L+ L+++G+RV+I Q++ +
Sbjct: 775 EENERENGIETLQSL---IRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRM 822
>gi|340517575|gb|EGR47819.1| predicted protein [Trichoderma reesei QM6a]
Length = 1093
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 14/144 (9%)
Query: 62 DNLGSLKEKTSKYVAYGGKLDSSRFV----EYWIPVQISNVQLEQYCGTLLSKSLSLC-- 115
DNL L EK Y KL +F+ + +PV ++ +Q E+ ++++K+ L
Sbjct: 702 DNLPKLHEKIRPYFLRRTKLGVLKFLPPMAQIILPVTMTVIQ-EKLSKSIMAKNPQLIRA 760
Query: 116 ----SPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKL 171
S + G L++IL+ RKC HP++ ++++ + L V+AS KL
Sbjct: 761 VFANSKMNAKDRGSLNNILMQLRKCLCHPFMYSEAIEERHHDPQVVHRNL---VEASAKL 817
Query: 172 QLLDTMLSELKNQGSRVIILFQIL 195
LL+ ML +LK +G RV+I Q L
Sbjct: 818 LLLEIMLPKLKERGHRVLIFSQFL 841
>gi|327351880|gb|EGE80737.1| chromodomain helicase hrp3 [Ajellomyces dermatitidis ATCC 18188]
Length = 1549
Score = 53.9 bits (128), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S++QLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 701 EKIIRVELSDIQLEYYKNILTKNYAALNQGSKGQKQSLL-NIMMELKKASNHPFMFPNAE 759
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L E + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 760 SRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMV 807
>gi|326923617|ref|XP_003208031.1| PREDICTED: lymphoid-specific helicase-like [Meleagris gallopavo]
Length = 871
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ L + ++ E L VK SGK LLD ML ELK +G
Sbjct: 592 LQNIMMLLRKCCNHPYLIEYPLDPA-TQQFKVDEDL---VKNSGKFLLLDRMLPELKKRG 647
Query: 186 SRVIILFQILII 197
+V++ Q+ ++
Sbjct: 648 HKVLMFSQMTMM 659
>gi|354477104|ref|XP_003500762.1| PREDICTED: lymphocyte-specific helicase [Cricetulus griseus]
gi|344242585|gb|EGV98688.1| Lymphocyte-specific helicase [Cricetulus griseus]
Length = 784
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 117 PLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDT 176
P++++ L +I++ RKCC+HPYL++ + + +D ++ E L V SGK +LD
Sbjct: 497 PIESEVNLKLRNIMMLLRKCCNHPYLIEYPIDP-VTQDFKIDEEL---VTNSGKFLVLDR 552
Query: 177 MLSELKNQGSRVIILFQI 194
ML ELK +G +V+I Q+
Sbjct: 553 MLPELKKRGHKVLIFSQM 570
>gi|110777198|ref|XP_624414.2| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Apis mellifera]
Length = 1966
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 963 EFIVRVELSPMQ-KKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAS 1021
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Q E + +KA+GKL LL ML +L++ G RV+I Q+
Sbjct: 1022 QEAPTAPNGSYETSAL-IKAAGKLVLLSKMLKKLRDDGHRVLIFSQM 1067
>gi|313231904|emb|CBY09016.1| unnamed protein product [Oikopleura dioica]
Length = 1677
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV----DKS 146
I V+++N+Q + Y L L V L + ++ RKCC+HP+L+ DK
Sbjct: 611 IEVELTNIQKKYYRAILERNFDFLSKGASTGNVPSLMNTMMELRKCCNHPFLIKGAEDKI 670
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
+ K E+A+ L V+ASGK+ L+ +L +LK G +V+I Q++ +
Sbjct: 671 IDEYRAKG-EVADPLTSIVQASGKMVLIHKLLPKLKAGGHKVLIFSQMIRV 720
>gi|198466497|ref|XP_002135204.1| GA23929 [Drosophila pseudoobscura pseudoobscura]
gi|198150627|gb|EDY73831.1| GA23929 [Drosophila pseudoobscura pseudoobscura]
Length = 2036
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 19 EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYG 78
+ GE D S +Q H M H R L D + N+ S E
Sbjct: 936 QAFQGEFADVSKEEQVKRLHEMLGPHMLR-------RLKTDVLKNMPSKSE--------- 979
Query: 79 GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
+ + V++S +Q +++ +L+K+ + L +I++ +KCC+
Sbjct: 980 ----------FIVRVELSAMQ-KKFYKFILTKNYEALNSKTGGGSCSLINIMMDLKKCCN 1028
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HPYL + + L E ++ KA+GKL LL ML +LK+Q RV+I Q+
Sbjct: 1029 HPYLFPSAAEEAQTAAGGLYE-INSLTKAAGKLVLLSKMLRQLKSQNHRVLIFSQM 1083
>gi|171691859|ref|XP_001910854.1| hypothetical protein [Podospora anserina S mat+]
gi|170945878|emb|CAP72679.1| unnamed protein product [Podospora anserina S mat+]
Length = 1274
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 14/113 (12%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLC------SPLKNDPVGVLHDILISARKCCDHPYLVD 144
+PV +S +Q E+ C +++ K+ L LK + G L +IL+ RKC HP++
Sbjct: 779 VPVSMSVLQ-ERLCKSIMEKNPQLIRSIFAQGKLKANERGSLSNILMQLRKCLCHPFIYS 837
Query: 145 KSLQSLLVKDLELAEYLDVG--VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++++ D L+ L ++AS KL LL+ ML +LK +G RV+I Q L
Sbjct: 838 QAIE-----DRNLSPELTRRNLIEASSKLMLLEIMLPKLKERGHRVLIFSQFL 885
>gi|336376751|gb|EGO05086.1| hypothetical protein SERLA73DRAFT_100761 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1757
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 13/115 (11%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKN---------DPVGVLHDILISARKCCDHPY 141
+PV ++ +Q E Y ++LS++LS+ + +++IL+ RKC HPY
Sbjct: 1109 VPVSMAPLQKELY-RSILSQNLSILNSFAQPSKSKVSTTTTKTNINNILMQLRKCLQHPY 1167
Query: 142 LVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILI 196
LV++ ++ + E E L + ASGKL+LL T+L +LK +G RV++ Q +I
Sbjct: 1168 LVNEDIEPRGLPPQETHEKL---IDASGKLRLLRTLLPKLKARGHRVLLFSQFVI 1219
>gi|118092730|ref|XP_421626.2| PREDICTED: lymphoid-specific helicase [Gallus gallus]
Length = 822
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ L + ++ E L VK SGK LLD ML ELK +G
Sbjct: 543 LQNIMMLLRKCCNHPYLIEYPLDPA-TQQFKVDEDL---VKNSGKFLLLDRMLPELKKRG 598
Query: 186 SRVIILFQILII 197
+V++ Q+ ++
Sbjct: 599 HKVLMFSQMTMM 610
>gi|62740093|gb|AAH94093.1| LOC733207 protein [Xenopus laevis]
Length = 1416
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S Q + Y L +L K G L +I++ +KCC+H YL+
Sbjct: 707 VEQILRVEMSASQKQYYKWILTRNYKALSKGSKGSTSGFL-NIMMELKKCCNHCYLIKAP 765
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ E ++L +++SGKL LLD +L L+ +G+RV+I Q++
Sbjct: 766 EENEFYNRQEALQHL---IRSSGKLILLDKLLVRLRERGNRVLIFSQMV 811
>gi|308497953|ref|XP_003111163.1| CRE-TAG-192 protein [Caenorhabditis remanei]
gi|308240711|gb|EFO84663.1| CRE-TAG-192 protein [Caenorhabditis remanei]
Length = 2998
Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 12/116 (10%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I VQ+S++Q + Y L LC K L ++++ RKCC+HP+L++ +
Sbjct: 1450 ETIIEVQLSDMQKKFYRAILERNFSHLC---KGTSAPSLMNVMMELRKCCNHPFLINGAE 1506
Query: 148 QSLLVKDLELA------EYL--DVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++++ D LA E L V+ASGK+ L++ +L +L+ G +V+I Q++
Sbjct: 1507 ETIM-NDFRLAHPDWDDETLAQKALVQASGKVVLIEKLLPKLRKDGHKVLIFSQMV 1561
>gi|336389708|gb|EGO30851.1| hypothetical protein SERLADRAFT_444458 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1725
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 13/115 (11%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKN---------DPVGVLHDILISARKCCDHPY 141
+PV ++ +Q E Y ++LS++LS+ + +++IL+ RKC HPY
Sbjct: 1077 VPVSMAPLQKELY-RSILSQNLSILNSFAQPSKSKVSTTTTKTNINNILMQLRKCLQHPY 1135
Query: 142 LVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILI 196
LV++ ++ + E E L + ASGKL+LL T+L +LK +G RV++ Q +I
Sbjct: 1136 LVNEDIEPRGLPPQETHEKL---IDASGKLRLLRTLLPKLKARGHRVLLFSQFVI 1187
>gi|239613379|gb|EEQ90366.1| chromodomain helicase [Ajellomyces dermatitidis ER-3]
Length = 1513
Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S++QLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 701 EKIIRVELSDIQLEYYKNILTKNYAALNQGSKGQKQSLL-NIMMELKKASNHPFMFPNAE 759
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L E + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 760 SRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMV 807
>gi|261194801|ref|XP_002623805.1| chromodomain helicase [Ajellomyces dermatitidis SLH14081]
gi|239588343|gb|EEQ70986.1| chromodomain helicase [Ajellomyces dermatitidis SLH14081]
Length = 1513
Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S++QLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 701 EKIIRVELSDIQLEYYKNILTKNYAALNQGSKGQKQSLL-NIMMELKKASNHPFMFPNAE 759
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L E + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 760 SRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMV 807
>gi|194751939|ref|XP_001958281.1| GF10842 [Drosophila ananassae]
gi|190625563|gb|EDV41087.1| GF10842 [Drosophila ananassae]
Length = 1971
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 19 EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYG 78
+ GE D S +Q H M H R L D + N+ S E
Sbjct: 915 QAFQGEFADVSKEEQVKRLHEMLGPHMLR-------RLKTDVLKNMPSKSE--------- 958
Query: 79 GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
+ + V++S +Q +++ +L+K+ + L +I++ +KCC+
Sbjct: 959 ----------FIVRVELSAMQ-KKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCN 1007
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HPYL + + L E ++ KA+GKL LL ML +LK+Q RV+I Q+
Sbjct: 1008 HPYLFPSAAEEAPTSAGGLYE-INSLTKAAGKLVLLSKMLKQLKSQNHRVLIFSQM 1062
>gi|67522999|ref|XP_659560.1| hypothetical protein AN1956.2 [Aspergillus nidulans FGSC A4]
gi|40745965|gb|EAA65121.1| hypothetical protein AN1956.2 [Aspergillus nidulans FGSC A4]
gi|259487315|tpe|CBF85892.1| TPA: chromatin remodeling complex subunit (Chd3), putative
(AFU_orthologue; AFUA_4G13440) [Aspergillus nidulans
FGSC A4]
Length = 1443
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 14/119 (11%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLC----------SPLKNDPVGVLHDILISARKC 136
V+ +PV +S +Q + Y ++L+K+ L PLK L++IL+ RKC
Sbjct: 834 VQIIVPVTMSVLQKKLY-KSILAKNTQLIKAIFQRNEEDQPLKQTERHNLNNILMQLRKC 892
Query: 137 CDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
HP++ K+++ D E+A + ++ V A+GKLQLL+ ML +L+ +G RV++ Q L
Sbjct: 893 LCHPFIFSKAIEER-TDDPEVA-HRNL-VDAAGKLQLLELMLPKLQARGHRVLVFSQFL 948
>gi|341883025|gb|EGT38960.1| CBN-TAG-192 protein [Caenorhabditis brenneri]
Length = 2968
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 12/116 (10%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I VQ+S++Q + Y L LC K L ++++ RKCC+HP+L++ +
Sbjct: 1425 ETIIEVQLSDMQKKFYRAILERNFSHLC---KGTSAPSLMNVMMELRKCCNHPFLINGAE 1481
Query: 148 QSLLVKDLELA------EYL--DVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++++ D LA E L V+ASGK+ L++ +L +L+ G +V+I Q++
Sbjct: 1482 ETIM-NDFRLAHPDWDEETLTQKALVQASGKVVLIEKLLPKLRKDGHKVLIFSQMV 1536
>gi|327276403|ref|XP_003222959.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like isoform 2
[Anolis carolinensis]
Length = 2876
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL+ +
Sbjct: 1091 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA 1149
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L ++++GKL L+D +L ++K+ G +V+I Q++
Sbjct: 1150 EEKILGEFRETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMV 1204
>gi|325181644|emb|CCA16095.1| KIAA1416 protein putative [Albugo laibachii Nc14]
Length = 1788
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKN-DPVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++ VQ +Q+ + K+ S S N + + L ++++ RKCC+HPYL + ++
Sbjct: 683 IEVELTPVQ-KQWYRAIYEKNTSFLSRGGNPNNIPNLMNVMMELRKCCNHPYL-NNGVEE 740
Query: 150 LLVKDLELA-EYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
+L + L E ++ VK GK+ LLD +L LK G +V+I Q++ +
Sbjct: 741 ILNEGLRTERERHEMMVKCCGKMVLLDKLLPRLKEGGHKVLIFSQMVRV 789
>gi|307180140|gb|EFN68184.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Camponotus floridanus]
Length = 1960
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 961 EFIVRVELSPMQ-KKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAS 1019
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Q E + +KA+GKL LL ML +L++ G RV+I Q+
Sbjct: 1020 QEAPTGPNGSYETSAL-IKAAGKLVLLSKMLKKLRDDGHRVLIFSQM 1065
>gi|358395726|gb|EHK45113.1| hypothetical protein TRIATDRAFT_243252, partial [Trichoderma
atroviride IMI 206040]
Length = 1318
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 14/144 (9%)
Query: 62 DNLGSLKEKTSKYVAYGGKLDSSRFV----EYWIPVQISNVQLEQYCGTLLSKSLSLC-- 115
D L L EK Y KL +F+ + +PV ++ +Q E+ ++++K+ L
Sbjct: 885 DTLPKLHEKIRPYFLRRTKLGVLKFLPPMAQIILPVTMTVIQ-EKLSKSIMAKNPQLIRA 943
Query: 116 ----SPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKL 171
S + G L++IL+ RKC HP++ ++++ + L L V+AS KL
Sbjct: 944 VFANSKMNAKDRGSLNNILMQLRKCLCHPFMYSEAIEERHHDPMVLHRNL---VEASAKL 1000
Query: 172 QLLDTMLSELKNQGSRVIILFQIL 195
LL+ ML +LK +G RV+I Q L
Sbjct: 1001 LLLEIMLPKLKERGHRVLIFSQFL 1024
>gi|332029993|gb|EGI69818.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Acromyrmex echinatior]
Length = 1852
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 864 EFIVRVELSPMQ-KKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAS 922
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Q E + +KA+GKL LL ML +L++ G RV+I Q+
Sbjct: 923 QEAPTGPNGSYETSAL-IKAAGKLVLLSKMLKKLRDDGHRVLIFSQM 968
>gi|328868264|gb|EGG16642.1| chromo domain-containing protein [Dictyostelium fasciculatum]
Length = 2319
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 9/114 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V++S++Q Y L L +K+ + L +I+I RK C+HP+L+ +
Sbjct: 819 ETVIQVELSSIQKTYYRAILEKNREFLARGVKSKSNLPKLTNIMIQIRKVCNHPFLIPGA 878
Query: 147 -----LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
Q L D ++AE L +++S KL L+D +L LK +G RV+I Q++
Sbjct: 879 EDTIIRQEKLTTDEQIAELL---IRSSSKLVLVDKLLQRLKKEGHRVLIFSQMV 929
>gi|198433296|ref|XP_002124821.1| PREDICTED: similar to chromodomain helicase DNA binding protein 7
[Ciona intestinalis]
Length = 4218
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV---- 143
E I V+++++Q + Y L L V L + ++ RKCC+HPYL+
Sbjct: 1818 ETIIEVELTSIQKKYYRAILERNFEFLAKGTTGGNVPNLMNTMMELRKCCNHPYLIKGAE 1877
Query: 144 DKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
DK +Q V E L +++SGKL L+D +L LK G +V+I Q++
Sbjct: 1878 DKIMQEHRVMSNE-QNPLQAMIQSSGKLVLIDKLLPRLKQGGHKVLIFSQMV 1928
>gi|170036699|ref|XP_001846200.1| chromodomain helicase-DNA-binding protein 3 [Culex quinquefasciatus]
gi|167879513|gb|EDS42896.1| chromodomain helicase-DNA-binding protein 3 [Culex quinquefasciatus]
Length = 1982
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V +S +Q ++Y +L+++ +P L +I++ +KCC+HPYL ++
Sbjct: 994 EFIVRVDLSPMQ-KKYYKYILTRNFEALNPKGGGGACSLINIMMDLKKCCNHPYLFQAAV 1052
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + E + KA+GKL LL+ ML +LK G RV+I Q+
Sbjct: 1053 EEAPLGPGGNYE-ITALTKAAGKLVLLEKMLKQLKETGHRVLIFSQM 1098
>gi|159131149|gb|EDP56262.1| chromodomain helicase (Chd1), putative [Aspergillus fumigatus
A1163]
Length = 1523
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y +L+K+ + + L +I++ +K +HP++ +
Sbjct: 679 EKIIRVELSDVQLEYY-KNILTKNYAALNDGAQGQKQSLLNIMMELKKASNHPFMFPNAE 737
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 738 AKILEGSTRREDVLRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 785
>gi|119495934|ref|XP_001264742.1| chromodomain helicase (Chd1), putative [Neosartorya fischeri NRRL
181]
gi|119412904|gb|EAW22845.1| chromodomain helicase (Chd1), putative [Neosartorya fischeri NRRL
181]
Length = 1523
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y +L+K+ + + L +I++ +K +HP++ +
Sbjct: 679 EKIIRVELSDVQLEYY-KNILTKNYAALNDGAQGQKQSLLNIMMELKKASNHPFMFPNAE 737
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 738 AKILEGSTRREDVLRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 785
>gi|70995269|ref|XP_752395.1| chromodomain helicase (Chd1) [Aspergillus fumigatus Af293]
gi|66850030|gb|EAL90357.1| chromodomain helicase (Chd1), putative [Aspergillus fumigatus
Af293]
Length = 1523
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y +L+K+ + + L +I++ +K +HP++ +
Sbjct: 679 EKIIRVELSDVQLEYY-KNILTKNYAALNDGAQGQKQSLLNIMMELKKASNHPFMFPNAE 737
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 738 AKILEGSTRREDVLRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMV 785
>gi|432115005|gb|ELK36643.1| Lymphoid-specific helicase [Myotis davidii]
Length = 837
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L + SGK +LD ML ELK +G
Sbjct: 558 LQNIMMLLRKCCNHPYLIEYPIDPV-TQEFKVDEEL---ITNSGKFLILDRMLPELKTRG 613
Query: 186 SRVIILF 192
+V++LF
Sbjct: 614 HKVVLLF 620
>gi|327276401|ref|XP_003222958.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like isoform 1
[Anolis carolinensis]
Length = 2892
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL+ +
Sbjct: 1091 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA 1149
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L ++++GKL L+D +L ++K+ G +V+I Q++
Sbjct: 1150 EEKILGEFRETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMV 1204
>gi|224052438|ref|XP_002197654.1| PREDICTED: lymphoid-specific helicase [Taeniopygia guttata]
Length = 824
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ L + ++ E L VK SGK LLD ML ELK +G
Sbjct: 545 LQNIMMLLRKCCNHPYLIEYPLDPA-TQQFKVDEDL---VKNSGKFLLLDRMLPELKKRG 600
Query: 186 SRVIILFQILII 197
+V++ Q+ ++
Sbjct: 601 HKVLLFSQMTMM 612
>gi|307197292|gb|EFN78584.1| Chromodomain-helicase-DNA-binding protein 7 [Harpegnathos saltator]
Length = 4395
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 17/156 (10%)
Query: 46 SRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCG 105
S G+VH+ L+ + L LKE K +A E + V+++N+Q + Y G
Sbjct: 1971 SEGEVHKLQLLLKPMM--LRRLKEDVEKSLAPKE--------ETVVEVELTNIQKKYYRG 2020
Query: 106 TLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAE------ 159
L L + + L + ++ RKCC HP+L++ + + + D + E
Sbjct: 2021 ILERNFSFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNGAEDQIQL-DYKTGEKEDSEA 2079
Query: 160 YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
Y V +SGK+ L+D +L +LK G RV+I Q++
Sbjct: 2080 YYHALVNSSGKMVLIDKLLPKLKASGHRVLIFSQMV 2115
>gi|397611113|gb|EJK61181.1| hypothetical protein THAOC_18377, partial [Thalassiosira oceanica]
Length = 1808
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG-VLHDILISARKCCDHPYLVDKS 146
E I V+++ +Q +QY L K+L K G L+++ + RKCC+HP+L+
Sbjct: 640 ETLIEVELTVLQ-KQYYRALYEKNLKFLHKNKKAIDGPSLNNLAMQLRKCCNHPFLLTGV 698
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
Q + ++ A+ V ASGKL LLD +L LK G RV+I Q I+
Sbjct: 699 EQEVRQQNPS-ADVTQSLVNASGKLVLLDKLLPRLKADGHRVLIFSQFKIM 748
>gi|242011216|ref|XP_002426351.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510428|gb|EEB13613.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 4944
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V+++N+Q + Y G L L + + L + ++ RKCC HPYL++ +
Sbjct: 2353 ETVVEVELTNIQKKYYRGILERNFSFLSKGTTSSNIPNLMNTMMELRKCCIHPYLLNGAE 2412
Query: 148 QSLLVKDLELA-----EYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + + + Y + +SGK+ L+D +L +LK+ G RV+I Q++
Sbjct: 2413 EQIQIDYRNVNGDDPDAYFKALIHSSGKMVLVDKLLPKLKSNGHRVLIFSQMV 2465
>gi|410900378|ref|XP_003963673.1| PREDICTED: LOW QUALITY PROTEIN: lymphoid-specific helicase-like
[Takifugu rubripes]
Length = 855
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 65 GSLKEKTSKYVAYG-GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPV 123
G K + K V+Y D+ R +E ++ +V+ E L + SPL
Sbjct: 521 GRPKRRNRKVVSYKETDEDTPRDLEKYL----EDVRKEHEQRXASPSVLQVQSPLDAQIN 576
Query: 124 GVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKN 183
L +IL+ ++CC+HPYLV L + + ++ E L V++SGK +LD ML LK
Sbjct: 577 MKLQNILMLLKRCCNHPYLVAYPLDPV-TQQFKIDEQL---VQSSGKFLILDRMLPALKR 632
Query: 184 QGSRVIILFQILII 197
+G +V+I Q+ I
Sbjct: 633 RGHKVLIFSQMTSI 646
>gi|443730198|gb|ELU15824.1| hypothetical protein CAPTEDRAFT_142589, partial [Capitella teleta]
Length = 850
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 95 ISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKD 154
+S +Q +QY L + + S N PV ++ +I++ RK HPYL D ++ +
Sbjct: 239 LSALQKKQYKAILTRDASAFES---NTPVSLM-NIVVQLRKSVSHPYLFDAGVEP---EP 291
Query: 155 LELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
EL E+L V +SGKL LLD +LS LK G +V++ Q+
Sbjct: 292 FELGEHL---VTSSGKLMLLDKLLSFLKVNGHKVLVFSQM 328
>gi|325089685|gb|EGC42995.1| chromodomain helicase [Ajellomyces capsulatus H88]
Length = 1552
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S++QLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 705 EKIIRVELSDIQLEYYKNILTKNYAALNQGGKGQKQSLL-NIMMELKKASNHPFMFPNAE 763
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L E + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 764 SRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMV 811
>gi|240279419|gb|EER42924.1| chromodomain helicase hrp3 [Ajellomyces capsulatus H143]
Length = 1540
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S++QLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 693 EKIIRVELSDIQLEYYKNILTKNYAALNQGGKGQKQSLL-NIMMELKKASNHPFMFPNAE 751
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L E + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 752 SRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMV 799
>gi|225559675|gb|EEH07957.1| chromodomain helicase hrp3 [Ajellomyces capsulatus G186AR]
Length = 1552
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S++QLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 705 EKIIRVELSDIQLEYYKNILTKNYAALNQGGKGQKQSLL-NIMMELKKASNHPFMFPNAE 763
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L E + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 764 SRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMV 811
>gi|156383405|ref|XP_001632824.1| predicted protein [Nematostella vectensis]
gi|156219886|gb|EDO40761.1| predicted protein [Nematostella vectensis]
Length = 1022
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 119 KNDPVGVLHDILISARKCCDHPYLVDKSLQSL-LVKDLELAEYLDVGVKASGKLQLLDTM 177
K D + +L +IL+ RKCC+HPYL D + D+ L E SGK+++LD +
Sbjct: 404 KTDKMRLL-NILMQLRKCCNHPYLFDGAEPGPPYTTDVHLIE-------NSGKMRVLDKL 455
Query: 178 LSELKNQGSRVIILFQI 194
L+ LK +GSRV+I Q+
Sbjct: 456 LARLKQEGSRVLIFSQM 472
>gi|154280933|ref|XP_001541279.1| hypothetical protein HCAG_03376 [Ajellomyces capsulatus NAm1]
gi|150411458|gb|EDN06846.1| hypothetical protein HCAG_03376 [Ajellomyces capsulatus NAm1]
Length = 1552
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S++QLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 705 EKIIRVELSDIQLEYYKNILTKNYAALNQGGKGQKQSLL-NIMMELKKASNHPFMFPNAE 763
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L E + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 764 SRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMV 811
>gi|357476459|ref|XP_003608515.1| Chromodomain-helicase-DNA-binding protein, partial [Medicago
truncatula]
gi|355509570|gb|AES90712.1| Chromodomain-helicase-DNA-binding protein, partial [Medicago
truncatula]
Length = 1406
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV++S++Q E Y +L+K+ + L+N G+ +I++ RK C+HPYL
Sbjct: 971 TERMVPVELSSIQAE-YYRAMLTKNYQI---LRNIGKGIAQQSMLNIVMQLRKVCNHPYL 1026
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + D E+L ++ +KAS KL LL +ML L +G RV+I Q+
Sbjct: 1027 IPGT-----EPDSGSVEFLHEMRIKASAKLTLLHSMLKILYKEGHRVLIFSQM 1074
>gi|50306047|ref|XP_452985.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642118|emb|CAH01836.1| KLLA0C17578p [Kluyveromyces lactis]
Length = 1525
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S+VQ E Y L +L S +K V +L +++ +K +HPYL D +
Sbjct: 623 ERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLL-NVMNELKKASNHPYLFDNAE 681
Query: 148 QSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
+ +L K L + +SGK+ LLD +L+ LK G RV+I Q++ I
Sbjct: 682 ERVLSKFGDGHKSRENILRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRI 735
>gi|224071533|ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222840937|gb|EEE78484.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 2327
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV++S++Q E Y +L+K+ + L+N GV +I++ RK C+HPYL
Sbjct: 983 TERIVPVELSSIQAE-YYRAMLTKNYQM---LRNIGKGVAQQSMLNIVMQLRKICNHPYL 1038
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + D E+L ++ +KAS KL LL +ML L +G RV+I Q+
Sbjct: 1039 IPGT-----EPDSGSLEFLHEMRIKASAKLTLLHSMLKILYKEGHRVLIFSQM 1086
>gi|322799754|gb|EFZ20959.1| hypothetical protein SINV_16592 [Solenopsis invicta]
Length = 529
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 237 EFIVRVELSPMQ-KKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAS 295
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Q E + +KA+GKL LL ML +L++ G RV+I Q+
Sbjct: 296 QEAPTGPNGSYETSAL-IKAAGKLVLLSKMLKKLRDDGHRVLIFSQM 341
>gi|301613323|ref|XP_002936158.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7, partial
[Xenopus (Silurana) tropicalis]
Length = 2908
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLK---NDPVGVLHDILISARKCCDHPYLVD 144
E I V+++N+Q ++Y +L K+ + S + V L + ++ RKCC+HPYL++
Sbjct: 1129 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGGGGGHANVPNLLNTMMELRKCCNHPYLIN 1187
Query: 145 KSLQSLL-----VKDLELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + +L + + +++ L +A+GKL L+D +L +LK G RV+I Q++
Sbjct: 1188 GAEEKILEEFRETHNCDPSDFQLQAMTQAAGKLVLIDKLLPKLKAGGHRVLIFSQMV 1244
>gi|398410912|ref|XP_003856803.1| SNF2 family DNA-dependent chromodomain-containing ATPase
[Zymoseptoria tritici IPO323]
gi|339476688|gb|EGP91779.1| SNF2 family DNA-dependent chromodomain-containing ATPase
[Zymoseptoria tritici IPO323]
Length = 1578
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L + K +L +I++ +K +HP++ +
Sbjct: 627 EKIIRVELSDVQLEYYKNILTRNYAALNAGNKAGKTSLL-NIMMELKKASNHPFMFPNAE 685
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + L + +SGK+ LLD +L+++K G RV+I Q++
Sbjct: 686 DRILAGSDARDDQLKALITSSGKMMLLDQLLTKMKRDGHRVLIFSQMV 733
>gi|406694974|gb|EKC98289.1| hypothetical protein A1Q2_07303 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1091
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 128 DILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSR 187
++L+ RK C HPYL D SL+ L + D E + L ASGKL L +L ELK +G R
Sbjct: 8 NMLMELRKTCQHPYLSDPSLERLDLTDEEQHKRL---TDASGKLLFLKQLLPELKRRGHR 64
Query: 188 VIILFQILI 196
V++ Q I
Sbjct: 65 VLLFSQFKI 73
>gi|171687883|ref|XP_001908882.1| hypothetical protein [Podospora anserina S mat+]
gi|170943903|emb|CAP69555.1| unnamed protein product [Podospora anserina S mat+]
Length = 1700
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S++QLE Y +L+++ + S N L +I++ +K +HPY+ +
Sbjct: 707 EKIIRVELSDLQLEYY-KNILTRNYAALSDASNGHKQSLLNIMMELKKVSNHPYMFQGAE 765
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L E G + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 766 ERVLANGSGRREDAVKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMV 814
>gi|295669680|ref|XP_002795388.1| chromodomain helicase hrp3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285322|gb|EEH40888.1| chromodomain helicase hrp3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1520
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 694 EKIIRVELSDVQLEYYKNILTKNYAALNQGSKGQKQSLL-NIMMELKKASNHPFMFPNAE 752
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L E + + +SGK+ LLD +L++L+ G RV+I Q++
Sbjct: 753 SRILEGKTGREEMMRAIITSSGKMMLLDQLLAKLRKDGHRVLIFSQMV 800
>gi|225682812|gb|EEH21096.1| chromodomain helicase hrp1 [Paracoccidioides brasiliensis Pb03]
Length = 1521
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 695 EKIIRVELSDVQLEYYKNILTKNYAALNQGSKGQKQSLL-NIMMELKKASNHPFMFPNAE 753
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L E + + +SGK+ LLD +L++L+ G RV+I Q++
Sbjct: 754 SRILEGKTGREEMMRAIITSSGKMMLLDQLLAKLRKDGHRVLIFSQMV 801
>gi|348523828|ref|XP_003449425.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Oreochromis
niloticus]
Length = 2125
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL
Sbjct: 995 TELIVRVELSPMQKKYYKLILTKNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--P 1051
Query: 147 LQSLLVKDLELAEYLDVGV-KASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ S+ Y + KASGKL LL ML +LK QG RV++ Q+
Sbjct: 1052 VASMEAPKTPSGAYEGSALTKASGKLTLLQKMLRKLKEQGHRVLVFSQM 1100
>gi|338716744|ref|XP_003363512.1| PREDICTED: lymphoid-specific helicase [Equus caballus]
Length = 781
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 117 PLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDT 176
P++++ L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD
Sbjct: 550 PIESEVNLKLQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDR 605
Query: 177 MLSELKNQGSRVIILFQI 194
ML ELK +G +V++ Q+
Sbjct: 606 MLPELKTRGHKVLLFSQM 623
>gi|428161700|gb|EKX30993.1| hypothetical protein GUITHDRAFT_149568, partial [Guillardia theta
CCMP2712]
Length = 1041
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 67/112 (59%), Gaps = 6/112 (5%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGV-LHDILISARKCCDHPYLVDK 145
VE +P+ ++++Q + + +L+K+L + + D V L+++L+ RKCC+H YL D
Sbjct: 667 VEKTVPISLTDIQ-KTFYAAILAKNLDVLNGRNKDNRHVSLNNVLMELRKCCNHAYLFDS 725
Query: 146 SLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
+++ D LA V+ASGK +LL +L +LK +GS+V+I Q I+
Sbjct: 726 AVKHHKNPDDTLAHL----VQASGKFELLHLLLPKLKERGSKVLIFSQFKIM 773
>gi|410924259|ref|XP_003975599.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like,
partial [Takifugu rubripes]
Length = 2183
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 66/120 (55%), Gaps = 13/120 (10%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP------VGVLHDILISARKCCDHPY 141
E I V+++N+Q ++Y +L K+ S S + V L + ++ RKCC+HPY
Sbjct: 217 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGGSGGGGGGSSVPNLLNTMMELRKCCNHPY 275
Query: 142 LVDKSLQSLL--VKDLELAEYLDVGVKA----SGKLQLLDTMLSELKNQGSRVIILFQIL 195
L++ + + + +D + D+ ++A SGKL L+D +L +LK G RV++ Q++
Sbjct: 276 LINGAEEKIAEEFRDTHGTDVPDMPLQAMIHASGKLVLIDKLLPKLKAGGHRVLVFSQMV 335
>gi|401887148|gb|EJT51152.1| hypothetical protein A1Q1_07616 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1091
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 128 DILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSR 187
++L+ RK C HPYL D SL+ L + D E + L ASGKL L +L ELK +G R
Sbjct: 8 NMLMELRKTCQHPYLSDPSLERLDLTDEEQHKRL---TDASGKLLFLKQLLPELKRRGHR 64
Query: 188 VIILFQILI 196
V++ Q I
Sbjct: 65 VLLFSQFKI 73
>gi|298714899|emb|CBJ27655.1| similar to chromodomain helicase DNA binding protein 4 isoform 5
[Ectocarpus siliculosus]
Length = 2326
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 10/69 (14%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ +K C+HPYL + + + V+DL VKASGK++LLD+ML +L G
Sbjct: 1002 LQNIVMQLKKACNHPYLC-RPMDAASVEDL---------VKASGKMKLLDSMLKKLHKAG 1051
Query: 186 SRVIILFQI 194
+RV++ Q+
Sbjct: 1052 NRVLVFSQM 1060
>gi|226290256|gb|EEH45740.1| chromodomain helicase hrp3 [Paracoccidioides brasiliensis Pb18]
Length = 1521
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L K +L +I++ +K +HP++ +
Sbjct: 695 EKIIRVELSDVQLEYYKNILTKNYAALNQGSKGQKQSLL-NIMMELKKASNHPFMFPNAE 753
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L E + + +SGK+ LLD +L++L+ G RV+I Q++
Sbjct: 754 SRILEGKTGREEMMRAIITSSGKMMLLDQLLAKLRKDGHRVLIFSQMV 801
>gi|307199491|gb|EFN80104.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Harpegnathos saltator]
Length = 1948
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 962 EFIVRVELSPMQ-KKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAS 1020
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Q E + +KA+GKL LL ML +L+ G RV+I Q+
Sbjct: 1021 QEAPTGPNGSYETSAL-IKAAGKLVLLSKMLKKLRGDGHRVLIFSQM 1066
>gi|354465712|ref|XP_003495321.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Cricetulus griseus]
gi|344238589|gb|EGV94692.1| Chromodomain-helicase-DNA-binding protein 2 [Cricetulus griseus]
Length = 1827
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKAP 771
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ + L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 772 EENERENGQEVLQSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
>gi|193203140|ref|NP_491426.2| Protein CHD-7 [Caenorhabditis elegans]
gi|373253785|emb|CCD61264.1| Protein CHD-7 [Caenorhabditis elegans]
Length = 2967
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 12/116 (10%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I VQ+S++Q + Y L LC K L ++++ RKCC+HP+L++ +
Sbjct: 1436 ETIIEVQLSDMQKKFYRAILERNFSHLC---KGTSAPSLMNVMMELRKCCNHPFLINGAE 1492
Query: 148 QSLLVKDLELA------EYL--DVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++++ D LA E L ++ASGK+ L++ +L +L+ G +V+I Q++
Sbjct: 1493 EAIM-NDFRLAHPDWDEETLAHKALIQASGKVVLIEKLLPKLRKDGHKVLIFSQMV 1547
>gi|123445199|ref|XP_001311362.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
gi|121893168|gb|EAX98432.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
Length = 1639
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 102 QYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLE---LA 158
+Y + +K+ + + + L++I + RK C+HPYL+ + ++L++ ++ L
Sbjct: 491 EYYRAVFTKNQEFLTRCEKRRLANLNNISMELRKVCNHPYLITGAEDAILIEKMQQLGLK 550
Query: 159 EY-----LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E L+ ++ SGKL L+D +L+ LK +G RV+I Q+
Sbjct: 551 ERTNEFELETLIRTSGKLILVDKLLANLKKEGHRVLIFSQM 591
>gi|321468122|gb|EFX79109.1| hypothetical protein DAPPUDRAFT_319863 [Daphnia pulex]
Length = 4355
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V+++N+Q + Y G L L N V L + ++ RKCC HPYL++ +
Sbjct: 1936 ETIVEVELTNMQKKYYRGILERNFSFLTKGTTNANVPNLMNTMMELRKCCIHPYLLNGA- 1994
Query: 148 QSLLVKDLELAEYLDVG------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + +++++ D +++SGKL L+D +L +LK G RV+I Q++
Sbjct: 1995 EEQIQYEMKVSHTSDPDLHHKALIQSSGKLVLVDKLLPKLKADGHRVLIFSQMV 2048
>gi|440906808|gb|ELR57029.1| Chromodomain-helicase-DNA-binding protein 3, partial [Bos grunniens
mutus]
Length = 1940
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 948 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1004
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1005 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1052
>gi|431894030|gb|ELK03836.1| Chromodomain-helicase-DNA-binding protein 3 [Pteropus alecto]
Length = 2007
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 987 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1043
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1044 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1091
>gi|426238820|ref|XP_004013342.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Ovis aries]
Length = 2020
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 999 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1055
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1056 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1103
>gi|47215569|emb|CAG10740.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3070
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 66/116 (56%), Gaps = 9/116 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S N + L + ++ RKCC+HPYL+ S
Sbjct: 510 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLITGS 568
Query: 147 LQSLLVKDL------ELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +++ + A++ L ++A+GKL L+D +L +L G +V++ Q++
Sbjct: 569 AEEKILESFRKSYSPDAADFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMV 624
>gi|417413984|gb|JAA53300.1| Putative chromatin remodeling complex wstf-iswi small subunit,
partial [Desmodus rotundus]
Length = 1846
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 948 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1004
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1005 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1052
>gi|410979901|ref|XP_003996319.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Felis catus]
Length = 2100
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 1075 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1131
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1132 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1179
>gi|395836470|ref|XP_003791177.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
[Otolemur garnettii]
Length = 1964
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 978 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1034
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1035 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1082
>gi|395836468|ref|XP_003791176.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
[Otolemur garnettii]
Length = 1998
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 978 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1034
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1035 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1082
>gi|355678671|gb|AER96180.1| chromodomain helicase DNA binding protein 3 [Mustela putorius furo]
Length = 1740
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 856 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 912
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 913 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 960
>gi|359076762|ref|XP_003587462.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Bos taurus]
Length = 1833
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 813 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 869
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 870 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 917
>gi|358417347|ref|XP_003583617.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Bos taurus]
Length = 2012
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 992 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1048
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1049 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1096
>gi|345800551|ref|XP_536627.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Canis lupus familiaris]
Length = 1999
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 980 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1036
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1037 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1084
>gi|311268331|ref|XP_003131999.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1 [Sus
scrofa]
Length = 1968
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|311268329|ref|XP_003132000.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2 [Sus
scrofa]
Length = 2002
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|270007595|gb|EFA04043.1| hypothetical protein TcasGA2_TC014275 [Tribolium castaneum]
Length = 4075
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 65/115 (56%), Gaps = 9/115 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E + V+++N+Q ++Y +L ++ S S + + L + ++ RKCC HPYL++ +
Sbjct: 1820 ETVVEVELTNIQ-KKYYRAILERNFSFLSKGTTHANIPNLMNTMMELRKCCIHPYLLNGA 1878
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + D ++A+ Y + +SGK+ L+D +L +LK G RV+I Q++
Sbjct: 1879 -EDQIQYDYKMAQGEDPDAYYKALINSSGKMVLIDKLLPKLKANGHRVLIFSQMV 1932
>gi|149604227|ref|XP_001512847.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 2
[Ornithorhynchus anatinus]
Length = 2876
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRETHSPTAPDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|149604225|ref|XP_001512827.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
[Ornithorhynchus anatinus]
Length = 2885
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L V+++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRETHSPTAPDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|326426853|gb|EGD72423.1| transcription activator [Salpingoeca sp. ATCC 50818]
Length = 1106
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +IL+ RKCC+HPYL D + D L V SGKL +LD +L++LK Q
Sbjct: 500 LLNILMQLRKCCNHPYLFDGAEPGPPFTTDQHL-------VDNSGKLVVLDKLLTKLKAQ 552
Query: 185 GSRVIILFQI 194
GSRV+I Q+
Sbjct: 553 GSRVLIFSQM 562
>gi|148675185|gb|EDL07132.1| mCG19747 [Mus musculus]
Length = 1723
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 720 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKAP 778
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
S E+ + L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 779 EDSERESGQEVLQSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 826
>gi|26383564|dbj|BAC25543.1| unnamed protein product [Mus musculus]
Length = 561
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ + +
Sbjct: 365 IEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEK 423
Query: 150 LLVKDLELAE-------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L +D A L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 424 IL-EDFRKAHSSEASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 475
>gi|397621031|gb|EJK66066.1| hypothetical protein THAOC_13031 [Thalassiosira oceanica]
Length = 1566
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV---- 143
E + V +S +Q + Y LL ++ N + +I++ RKCC+HPYL
Sbjct: 555 ETLVMVGMSKMQKQLYKRLLLRDIKAITGKNTNSGKTAVLNIVMQLRKCCNHPYLFEGIE 614
Query: 144 DKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D++L L E+L V GKL ++D +L +LK +GSRV+I Q+
Sbjct: 615 DRTLDP-------LGEHL---VDNCGKLNMVDKLLKKLKERGSRVLIFTQM 655
>gi|361126616|gb|EHK98608.1| putative Chromodomain helicase hrp3 [Glarea lozoyensis 74030]
Length = 1268
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQLE Y L +L K +L +I++ +K +HPY+ +
Sbjct: 653 EKIIRVELSDVQLEYYKNILTRNYKALNEGSKGQKQSLL-NIMMELKKASNHPYMFPNAE 711
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 712 DKIIKGSTRRDDQLKGLIASSGKMMLLDRLLAKLKRDGHRVLIFSQMV 759
>gi|189237363|ref|XP_970443.2| PREDICTED: similar to kismet CG3696-PA [Tribolium castaneum]
Length = 4044
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 65/115 (56%), Gaps = 9/115 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E + V+++N+Q ++Y +L ++ S S + + L + ++ RKCC HPYL++ +
Sbjct: 1789 ETVVEVELTNIQ-KKYYRAILERNFSFLSKGTTHANIPNLMNTMMELRKCCIHPYLLNGA 1847
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + D ++A+ Y + +SGK+ L+D +L +LK G RV+I Q++
Sbjct: 1848 -EDQIQYDYKMAQGEDPDAYYKALINSSGKMVLIDKLLPKLKANGHRVLIFSQMV 1901
>gi|302414008|ref|XP_003004836.1| chromodomain helicase hrp3 [Verticillium albo-atrum VaMs.102]
gi|261355905|gb|EEY18333.1| chromodomain helicase hrp3 [Verticillium albo-atrum VaMs.102]
Length = 1326
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSK--SLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDK 145
E I V++S+VQLE Y L +LS + KN L +I++ +K +HPY+
Sbjct: 596 EKIIRVELSDVQLEYYKNILTRNYAALSDATGQKNS----LLNIMMELKKVSNHPYMFGG 651
Query: 146 SLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 652 AEDRVLAGSTRREDQVKGLIASSGKMMLLDQLLTKLKKDGHRVLIFSQMV 701
>gi|189458810|ref|NP_001074814.2| chromodomain helicase DNA binding protein 2 [Mus musculus]
Length = 1827
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKAP 771
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
S E+ + L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 772 EDSERESGQEVLQSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
>gi|47227437|emb|CAG04585.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2248
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 92 PVQISNVQLEQYCGTLLSKSL-SLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
P+Q + +Y +L+K+ +L S + V +L +I++ +KCC+HPYL + S+
Sbjct: 900 PMQKYDTLETKYYKHILTKNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLFPAA--SM 956
Query: 151 LVKDLELAEYLDVGV-KASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ Y + KASGKL LL ML +LK QG RV++ Q+
Sbjct: 957 EAQKTPTGAYEGSALTKASGKLMLLQKMLRKLKEQGHRVLVFSQM 1001
>gi|429963291|gb|ELA42835.1| hypothetical protein VICG_00150 [Vittaforma corneae ATCC 50505]
Length = 810
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 81 LDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHP 140
L + ++V + P +S +Q E Y ++L K LS L L +I++ +KCC+HP
Sbjct: 273 LMAKKYVNIYCP--LSGMQREWY-KSILKKDLSGIY-LDRGIKTTLLNIVMQLKKCCNHP 328
Query: 141 YLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
YL + + + E E+L + SGK+ +LD +LS LK++GSRV+I Q+
Sbjct: 329 YLFEGAEP----EPFETGEHL---IYNSGKMIILDKLLSRLKSKGSRVLIFSQM 375
>gi|406862704|gb|EKD15753.1| chromodomain helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1538
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 48 GDVHRKDDL-MVD--AIDNLGSLKEKTSKYVAYGGKL----DSSRFVEYWIPVQISNVQL 100
G++ +DDL + D A + + +L K Y+ K D E I V++S+VQL
Sbjct: 638 GELDIEDDLDLTDEAAGEKIAALTNKIQPYILRRTKQKVENDLPPKTEKIIRVELSDVQL 697
Query: 101 EQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEY 160
+ Y L +L K +L +I++ +K +HPY+ + + +L ++
Sbjct: 698 DYYKNILTRNYAALNEGGKGQKQSLL-NIMMELKKASNHPYMFPNAEEKILKGSDRREDH 756
Query: 161 LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L + +SGK+ LLD +L++LK RV+I Q++
Sbjct: 757 LKGLIASSGKMMLLDQLLTKLKRDNHRVLIFSQMV 791
>gi|346974989|gb|EGY18441.1| chromodomain helicase hrp3 [Verticillium dahliae VdLs.17]
Length = 1604
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSK--SLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDK 145
E I V++S+VQLE Y L +LS + KN L +I++ +K +HPY+
Sbjct: 674 EKIIRVELSDVQLEYYKNILTRNYAALSDATGQKNS----LLNIMMELKKVSNHPYMFGG 729
Query: 146 SLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 730 AEDRVLAGSTRREDQVKGLIASSGKMMLLDQLLTKLKKDGHRVLIFSQMV 779
>gi|344290176|ref|XP_003416814.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Loxodonta
africana]
Length = 1863
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 887 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 943
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL ML +LK QG RV+I Q+
Sbjct: 944 AAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQM 991
>gi|10434055|dbj|BAB14112.1| unnamed protein product [Homo sapiens]
Length = 730
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ + +
Sbjct: 212 IEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEK 270
Query: 150 LLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 271 ILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 322
>gi|356510796|ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
Length = 2325
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV++S++Q E Y +L+K+ + L+N GV +I++ RK C+HPYL
Sbjct: 980 TERMVPVELSSIQAE-YYRAMLTKNYQV---LRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1035
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + + E+L ++ +KAS KL LL +ML L +G RV+I Q+
Sbjct: 1036 IPGT-----EPESGSVEFLHEMRIKASAKLTLLHSMLKILHKEGHRVLIFSQM 1083
>gi|310793352|gb|EFQ28813.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 1599
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSK--SLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDK 145
E I V++S+VQLE Y L +LS + KN L +I++ +K +HPY+
Sbjct: 683 EKIIRVELSDVQLEYYKNILTRNYAALSNATGQKNS----LLNIMMELKKVSNHPYMFPG 738
Query: 146 SLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + +SGK+ LLD +L++LK G RV++ Q++
Sbjct: 739 AEDRVLAGSTRREDQIKGLIASSGKMMLLDQLLTKLKKDGHRVLVFSQMV 788
>gi|350529335|ref|NP_001131089.2| chromodomain-helicase-DNA-binding protein 8 [Xenopus (Silurana)
tropicalis]
gi|226706291|sp|B5DE69.2|CHD8_XENTR RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8
Length = 2184
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 65/117 (55%), Gaps = 12/117 (10%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP---LKNDPVGVLHDILISARKCCDHPYLVD 144
E I V+++N+Q ++Y +L K+ S + N P L + ++ RKCC+HPYL+
Sbjct: 990 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGASQSNTPN--LLNTMMELRKCCNHPYLIT 1046
Query: 145 KSLQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + ++ + E ++ V++SGKL L+D +L +L+ G +V+I Q++
Sbjct: 1047 GAEEKIISEFREATPVVPPDFHVQAMVRSSGKLVLIDKLLPKLRAGGHKVLIFSQMV 1103
>gi|213625823|gb|AAI71410.1| Helicase, lymphoid-specific [Danio rerio]
gi|213627472|gb|AAI71408.1| Helicase, lymphoid-specific [Danio rerio]
Length = 853
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 80 KLDSSRFVEYWIPVQISNVQLEQYCGTLLSK--SLSLCSPLKN--DPVGV-----LHDIL 130
K S + V Y P S LE+Y + + S + +P+ N PV L +IL
Sbjct: 521 KRRSRKVVNYTEPNTDSMKDLEKYLEKVQQELDSQASSTPVVNVFMPVDAQVNLKLQNIL 580
Query: 131 ISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVII 190
+ ++CC+H YL++ L D ++ E L V+ASGK +LD ML ELK +G +V+I
Sbjct: 581 MLLKRCCNHAYLIEYPLDPT-TGDFKIDEQL---VEASGKFLILDRMLPELKKRGHKVLI 636
Query: 191 LFQILII 197
Q+ I
Sbjct: 637 FSQMTSI 643
>gi|197246330|gb|AAI68549.1| Unknown (protein for MGC:184754) [Xenopus (Silurana) tropicalis]
Length = 2179
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 65/117 (55%), Gaps = 12/117 (10%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP---LKNDPVGVLHDILISARKCCDHPYLVD 144
E I V+++N+Q ++Y +L K+ S + N P L + ++ RKCC+HPYL+
Sbjct: 985 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGASQSNTPN--LLNTMMELRKCCNHPYLIT 1041
Query: 145 KSLQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + ++ + E ++ V++SGKL L+D +L +L+ G +V+I Q++
Sbjct: 1042 GAEEKIISEFREATPVVPPDFHVQAMVRSSGKLVLIDKLLPKLRAGGHKVLIFSQMV 1098
>gi|432852988|ref|XP_004067485.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like [Oryzias
latipes]
Length = 2979
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLS-LCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S L + L + ++ RKCC+HPYL+ +
Sbjct: 1147 ETIIEVELTNIQ-KKYYRAILEKNFSFLAKGAGQANMPNLVNTMMELRKCCNHPYLIKGA 1205
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L E+ +L V+++GKL L+D +L ++K G +V+I Q++
Sbjct: 1206 EEKILEDFREVHNPSAPDYHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1260
>gi|410975760|ref|XP_003994297.1| PREDICTED: lymphoid-specific helicase [Felis catus]
Length = 860
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 117 PLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDT 176
PL+++ L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD
Sbjct: 573 PLESEVNLKLQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDR 628
Query: 177 MLSELKNQGSRVIILFQI 194
ML ELK++G +V++ Q+
Sbjct: 629 MLPELKSRGHKVLLFSQM 646
>gi|449269639|gb|EMC80396.1| Chromodomain-helicase-DNA-binding protein 6, partial [Columba
livia]
Length = 2622
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S N + L + ++ RKCC+HPYL++ +
Sbjct: 610 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGA 668
Query: 147 LQSLL-----VKDLELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L E ++ L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 669 EEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 723
>gi|432901812|ref|XP_004076959.1| PREDICTED: lymphoid-specific helicase-like [Oryzias latipes]
Length = 852
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 60 AIDNLGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLK 119
A+ G K ++ + V Y D + F + + VQ E + SK+ PL
Sbjct: 515 ALTPSGRPKRRSRRVVDYRDTHDDTPFA---LEKYLERVQKEAEQRSASSKN---TIPLD 568
Query: 120 NDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLS 179
+ L ++L+ ++CC+HPYLV+ L ++ ++ E L V++SGK +LD +L
Sbjct: 569 SQINLKLQNVLMLLKRCCNHPYLVEYPLDPA-TQEFKIDEEL---VQSSGKFLILDRLLP 624
Query: 180 ELKNQGSRVIILFQILII 197
ELK +G +V+I Q+ I
Sbjct: 625 ELKKRGHKVLIFSQMTSI 642
>gi|363741430|ref|XP_003642493.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Gallus
gallus]
Length = 2696
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S N + L + ++ RKCC+HPYL++ +
Sbjct: 689 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGA 747
Query: 147 LQSLL-----VKDLELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L E ++ L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 748 EEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 802
>gi|324500342|gb|ADY40163.1| Chromodomain-helicase-DNA-binding protein 8, partial [Ascaris suum]
Length = 1811
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I +Q+SN Q + Y L LC K V L + ++ RKCC+HP+L++ +
Sbjct: 1318 ETIIEIQLSNTQKKYYRAILERNFSHLC---KGTSVPSLMNTMMELRKCCNHPFLINGAE 1374
Query: 148 QSLLVK------DLELAE-YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ ++ + D E Y V++SGKL L+ +L +L+ G +V+I Q++
Sbjct: 1375 EQIISEMKTVHPDWSEEELYQHALVQSSGKLVLIAKLLPKLRADGHKVLIFSQMV 1429
>gi|410912244|ref|XP_003969600.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like
[Takifugu rubripes]
Length = 2438
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLS-LCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S L + L + ++ RKCC+HPYL+ +
Sbjct: 606 ETIIEVELTNIQ-KKYYRAILEKNFSFLAKGAGQANMPNLVNTMMELRKCCNHPYLIKGA 664
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L E+ +L V+++GKL L+D +L ++K G +V+I Q++
Sbjct: 665 EEKILEDFREVYNPAAVDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 719
>gi|168050295|ref|XP_001777595.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162671080|gb|EDQ57638.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 775
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSL------CSPLKNDPVGVLHDILISARKCCDHPYLVD 144
+PV+++ VQ E Y LL+K+ L C P + L +I++ RK C+HPYL+
Sbjct: 465 VPVELTPVQAEYY-RALLTKNYQLLRQVGGCKPGGQNQS--LLNIMMQLRKVCNHPYLLP 521
Query: 145 KSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
S + ++ +KAS KL LL +ML LK G RV+I Q+
Sbjct: 522 GSEPEGGSPKF----FHEMRIKASAKLTLLHSMLRHLKRGGHRVLIFSQM 567
>gi|348500298|ref|XP_003437710.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Oreochromis
niloticus]
Length = 2579
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLS-LCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S L + L + ++ RKCC+HPYL+ K
Sbjct: 733 ETIIEVELTNIQ-KKYYRAILEKNFSFLAKGAGQANMPNLVNTMMELRKCCNHPYLI-KG 790
Query: 147 LQSLLVKDLE-------LAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +++D L +L V+++GKL L+D +L ++K G +V+I Q++
Sbjct: 791 AEEKILEDFREVHSPTALDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 846
>gi|347837698|emb|CCD52270.1| similar to chromodomain helicase (Chd1) [Botryotinia fuckeliana]
Length = 1531
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQL+ Y +L+++ + + P L +I++ +K +HPY+ +
Sbjct: 695 EKIIRVELSDVQLDYY-KNILTRNYAALNEGSKGPKQSLLNIMMELKKASNHPYMFPNAE 753
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + L + +SGK+ LLD +L++LK RV+I Q++
Sbjct: 754 EKILKGSERRDDQLKGLIASSGKMMLLDRLLAKLKKDNHRVLIFSQMV 801
>gi|326931681|ref|XP_003211955.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
[Meleagris gallopavo]
Length = 2658
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S N + L + ++ RKCC+HPYL++ +
Sbjct: 690 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGA 748
Query: 147 LQSLL-----VKDLELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L E ++ L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 749 EEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 803
>gi|301604374|ref|XP_002931866.1| PREDICTED: probable global transcription activator SNF2L1 [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + + +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 384 EVKIYLGLGKMQREWYTKILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 442
Query: 148 QS-LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D L V SGK+ +LD +L + K QGSRV+I Q+
Sbjct: 443 PGPPYTTDTHL-------VYNSGKMVVLDKLLPKFKEQGSRVLIFSQM 483
>gi|395505942|ref|XP_003757295.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 2
[Sarcophilus harrisii]
Length = 2884
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL+ +
Sbjct: 1096 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA 1154
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1155 EEKILGEFKETHNPAAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1209
>gi|79748111|ref|NP_001032178.1| helicase, lymphoid-specific [Danio rerio]
gi|52001265|gb|AAU21503.1| PASG [Danio rerio]
Length = 853
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 80 KLDSSRFVEYWIPVQISNVQLEQYCGTLLSK--SLSLCSPLKN--DPVGV-----LHDIL 130
K S + V Y P S LE+Y + + S + +P+ N PV L +IL
Sbjct: 521 KRRSRKVVNYTEPNTDSMKDLEKYLEKVQQELDSQASSTPVVNVFMPVDAQVNLKLQNIL 580
Query: 131 ISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVII 190
+ ++CC+H YL++ L D ++ E L V+ASGK +LD ML ELK +G +V+I
Sbjct: 581 MLLKRCCNHAYLIEYPLDPT-TGDFKIDEQL---VEASGKFLILDRMLPELKKRGHKVLI 636
Query: 191 LFQILII 197
Q+ I
Sbjct: 637 FSQMTSI 643
>gi|380476817|emb|CCF44500.1| SNF2 super family protein [Colletotrichum higginsianum]
Length = 1599
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSK--SLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDK 145
E I V++S+VQLE Y L +LS + KN L +I++ +K +HPY+
Sbjct: 685 EKIIRVELSDVQLEYYKNILTRNYAALSNATGQKNS----LLNIMMELKKVSNHPYMFAG 740
Query: 146 SLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + + +SGK+ LLD +L++LK G RV++ Q++
Sbjct: 741 AEDRVLAGSTRREDQIKGLIASSGKMMLLDQLLTKLKKDGHRVLVFSQMV 790
>gi|148674355|gb|EDL06302.1| chromodomain helicase DNA binding protein 6 [Mus musculus]
Length = 2695
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 692 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 750
Query: 147 LQSLL-----VKDLELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L E +++ L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 751 EEKILEDFRKAHSSEASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 805
>gi|395505946|ref|XP_003757297.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 4
[Sarcophilus harrisii]
Length = 2875
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL+ +
Sbjct: 1096 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA 1154
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1155 EEKILGEFKETHNPAAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1209
>gi|395505944|ref|XP_003757296.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 3
[Sarcophilus harrisii]
Length = 2891
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL+ +
Sbjct: 1096 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA 1154
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1155 EEKILGEFKETHNPAAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1209
>gi|324499657|gb|ADY39859.1| Chromodomain-helicase-DNA-binding protein 8 [Ascaris suum]
Length = 2707
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I +Q+SN Q + Y L LC K V L + ++ RKCC+HP+L++ +
Sbjct: 1354 ETIIEIQLSNTQKKYYRAILERNFSHLC---KGTSVPSLMNTMMELRKCCNHPFLINGAE 1410
Query: 148 QSLLVK------DLELAE-YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ ++ + D E Y V++SGKL L+ +L +L+ G +V+I Q++
Sbjct: 1411 EQIISEMKTVHPDWSEEELYQHALVQSSGKLVLIAKLLPKLRADGHKVLIFSQMV 1465
>gi|170590139|ref|XP_001899830.1| Associated with TFs and helicases family protein [Brugia malayi]
gi|158592749|gb|EDP31346.1| Associated with TFs and helicases family protein [Brugia malayi]
Length = 2707
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I +Q+SN Q + Y L LC K V L + ++ RKCC+HP+L+ +
Sbjct: 1291 ETIIEIQLSNTQKKYYRAILERNFSHLC---KGTSVPSLMNAMMELRKCCNHPFLISGAE 1347
Query: 148 QSLLVK----DLELAE---YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
+ +L + + +E Y V++SGKL L+ +L +L+ G +V+I Q++ +
Sbjct: 1348 EQILAEVKAGHPDWSEDDIYQHALVQSSGKLVLIAKLLPKLRTDGHKVLIFSQMVRV 1404
>gi|326669481|ref|XP_001922536.3| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like [Danio
rerio]
Length = 2485
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 66/116 (56%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLS-LCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S L V L + ++ RKCC+HPYL+ K
Sbjct: 692 ETIIEVELTNIQ-KKYYRAILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHPYLI-KG 749
Query: 147 LQSLLVKDLE-------LAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +++D + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 750 AEEKIMEDFKEVYSPAAVDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 805
>gi|194386618|dbj|BAG61119.1| unnamed protein product [Homo sapiens]
Length = 1108
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ + +
Sbjct: 624 IEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEK 682
Query: 150 LLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 683 ILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 734
>gi|157819999|ref|NP_001100993.1| chromodomain-helicase-DNA-binding protein 2 [Rattus norvegicus]
gi|149057183|gb|EDM08506.1| chromodomain helicase DNA binding protein 2 (predicted) [Rattus
norvegicus]
Length = 1834
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 720 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIRAP 778
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
S E+ + L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 779 EDSERETGQEVLQSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 826
>gi|61742812|ref|NP_775544.2| chromodomain helicase DNA binding protein 6 [Mus musculus]
Length = 2711
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 695 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 753
Query: 147 LQSLL-----VKDLELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L E +++ L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 754 EEKILEDFRKAHSSEASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 808
>gi|391347377|ref|XP_003747940.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Metaseiulus occidentalis]
Length = 1049
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q E Y L+ + K D + +L +IL+ RKCC+HPYL D +
Sbjct: 399 EVKIYVGLSKMQREWYTKCLMKDIDVVNGAGKVDKMRLL-NILMQLRKCCNHPYLFDGAE 457
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E+L V GK+ +LD +L LK QGSRV+I Q+
Sbjct: 458 PG---PPYTTDEHL---VYNCGKMVVLDKLLPRLKEQGSRVLIFSQM 498
>gi|355678754|gb|AER96205.1| chromodomain helicase DNA binding protein 9 [Mustela putorius furo]
Length = 702
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ + +
Sbjct: 109 IEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEK 167
Query: 150 LLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 168 ILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 219
>gi|223462579|gb|AAI50807.1| Chromodomain helicase DNA binding protein 6 [Mus musculus]
Length = 2711
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 695 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 753
Query: 147 LQSLL-----VKDLELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L E +++ L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 754 EEKILEDFRKAHSSEASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 808
>gi|154315192|ref|XP_001556919.1| hypothetical protein BC1G_04635 [Botryotinia fuckeliana B05.10]
Length = 1357
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQL+ Y +L+++ + + P L +I++ +K +HPY+ +
Sbjct: 695 EKIIRVELSDVQLDYY-KNILTRNYAALNEGSKGPKQSLLNIMMELKKASNHPYMFPNAE 753
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + L + +SGK+ LLD +L++LK RV+I Q++
Sbjct: 754 EKILKGSERRDDQLKGLIASSGKMMLLDRLLAKLKKDNHRVLIFSQMV 801
>gi|428166106|gb|EKX35088.1| hypothetical protein GUITHDRAFT_158768 [Guillardia theta CCMP2712]
Length = 530
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 120 NDPVGVLHDILISARKCCDHPYLVDKSLQSL--LVKDLELAEYLDVGVKASGKLQLLDTM 177
N+ L ++L+ RK C+HPYL SL +V D L VK++GKLQLLD M
Sbjct: 304 NNKAMSLMNVLMQMRKNCNHPYLFTAPFDSLGNIVVDERL-------VKSAGKLQLLDRM 356
Query: 178 LSELKNQGSRVIILFQI 194
L+ L+ G +V+I Q+
Sbjct: 357 LTILRKNGHKVLIFSQM 373
>gi|68164076|gb|AAY87153.1| ciprofibrate bound protein p240 isoform PRIC320-2 [Homo sapiens]
Length = 1995
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 209 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 267
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 268 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 322
>gi|395505940|ref|XP_003757294.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
[Sarcophilus harrisii]
Length = 2900
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL+ +
Sbjct: 1096 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA 1154
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1155 EEKILGEFKETHNPAAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1209
>gi|354491180|ref|XP_003507734.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
[Cricetulus griseus]
Length = 2714
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 695 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 753
Query: 147 LQSLL-----VKDLELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L E +++ L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 754 EEKILEDFRKAHSSEASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 808
>gi|426382181|ref|XP_004057693.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like
[Gorilla gorilla gorilla]
Length = 1997
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 209 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 267
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 268 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 322
>gi|365760981|gb|EHN02659.1| Chd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1468
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E + V++S+VQ E Y L +L + K +L +I+ +K +HPYL D +
Sbjct: 610 TERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLL-NIMNELKKASNHPYLFDNA 668
Query: 147 LQSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K + L + +SGK+ LLD +L+ LK G RV+I Q++
Sbjct: 669 EERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMV 721
>gi|261860470|dbj|BAI46757.1| chromodomain helicase DNA binding protein 9 [synthetic construct]
Length = 2012
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 209 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 267
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 268 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 322
>gi|74209142|dbj|BAE24963.1| unnamed protein product [Mus musculus]
Length = 1733
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ + +
Sbjct: 697 IEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEER 755
Query: 150 LLVKDLELAE-------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L +D A L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 756 IL-EDFRKAHSSEASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 807
>gi|402593631|gb|EJW87558.1| helicase [Wuchereria bancrofti]
Length = 2673
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I +Q+SN Q + Y L LC K V L + ++ RKCC+HP+L+ +
Sbjct: 1241 ETIIEIQLSNTQKKYYRAILERNFSHLC---KGTSVPSLMNAMMELRKCCNHPFLISGAE 1297
Query: 148 QSLLVK----DLELAE---YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
+ +L + + +E Y V++SGKL L+ +L +L+ G +V+I Q++ +
Sbjct: 1298 EQILAEVKAGHPDWSEDDIYQHALVQSSGKLVLIAKLLPKLRTDGHKVLIFSQMVRV 1354
>gi|344237002|gb|EGV93105.1| Chromodomain-helicase-DNA-binding protein 6 [Cricetulus griseus]
Length = 2031
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ + +
Sbjct: 696 IEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEK 754
Query: 150 LLVKDLELAE-------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L +D A L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 IL-EDFRKAHSSEASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 806
>gi|426252811|ref|XP_004020096.1| PREDICTED: lymphoid-specific helicase isoform 1 [Ovis aries]
Length = 837
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 65 GSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG 124
G K +T K V Y D +E I V E+ T++ S+ P++++
Sbjct: 505 GRPKRRTRKSVDYSKIDDFPNELEKLISQIQPEVDRER---TIVETSV----PIESEVNL 557
Query: 125 VLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +
Sbjct: 558 KLQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKTR 613
Query: 185 GSRVIILFQI 194
G +V++ Q+
Sbjct: 614 GHKVLLFSQM 623
>gi|401840653|gb|EJT43386.1| CHD1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1468
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E + V++S+VQ E Y L +L + K +L +I+ +K +HPYL D +
Sbjct: 610 TERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLL-NIMNELKKASNHPYLFDNA 668
Query: 147 LQSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K + L + +SGK+ LLD +L+ LK G RV+I Q++
Sbjct: 669 EERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMV 721
>gi|157821521|ref|NP_001101267.1| chromodomain-helicase-DNA-binding protein 6 [Rattus norvegicus]
gi|149043033|gb|EDL96607.1| chromodomain helicase DNA binding protein 6 (predicted) [Rattus
norvegicus]
Length = 2698
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 695 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 753
Query: 147 LQSLL-----VKDLELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L E +++ L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 754 EEKILEDFRKAHSSEASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 808
>gi|195379440|ref|XP_002048487.1| GJ13998 [Drosophila virilis]
gi|194155645|gb|EDW70829.1| GJ13998 [Drosophila virilis]
Length = 2012
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 19 EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYG 78
+ GE D S +Q H M H R L D + N+ S E
Sbjct: 928 QAFQGEFADVSKEEQVKRLHEMLGPHMLR-------RLKTDVLKNMPSKSE--------- 971
Query: 79 GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
+ + V++S +Q +++ +L+K+ + L +I++ +KCC+
Sbjct: 972 ----------FIVRVELSAMQ-KKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCN 1020
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HPYL + + + E ++ KA+GKL LL ML +LK+Q RV+I Q+
Sbjct: 1021 HPYLFPSAAEEAPTSAGGIYE-INSLTKAAGKLVLLSKMLKQLKSQNHRVLIFSQM 1075
>gi|115313218|gb|AAI24095.1| Hells protein [Danio rerio]
Length = 769
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 80 KLDSSRFVEYWIPVQISNVQLEQYCGTLLSK--SLSLCSPLKN--DPVGV-----LHDIL 130
K S + V Y P S LE+Y + + S + +P+ N PV L +IL
Sbjct: 521 KRRSRKVVNYTEPNTDSMKDLEKYLEKVQQELDSQASSTPVVNVFMPVDAQVNLKLQNIL 580
Query: 131 ISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVII 190
+ ++CC+H YL++ L D ++ E L V+ASGK +LD ML ELK +G +V+I
Sbjct: 581 MLLKRCCNHAYLIEYPLDPT-TGDFKIDEQL---VEASGKFLILDRMLPELKKRGHKVLI 636
Query: 191 LFQILII 197
Q+ I
Sbjct: 637 FSQMTSI 643
>gi|402590896|gb|EJW84826.1| chromodomain-helicase-DNA-binding protein 4 [Wuchereria bancrofti]
Length = 1519
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q ++Y +L+++ SP L +I++ +KCC+HPYL K+ S+
Sbjct: 784 VRVELSPMQ-KKYYKNILTRNFEALSPKGGGSQISLINIIMDLKKCCNHPYLFPKA--SI 840
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCENEI 206
L+ Y VKASGK LL ML +LK QG RV+I Q +L I CENE
Sbjct: 841 EAPKLKNGIYEGTALVKASGKFVLLQKMLKKLKEQGHRVLIFSQMTKMLDIMEDFCENEG 900
Query: 207 LGY 209
Y
Sbjct: 901 YKY 903
>gi|429864066|gb|ELA38441.1| chromo domain-containing protein 1 [Colletotrichum gloeosporioides
Nara gc5]
Length = 1605
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 59 DAIDNLGSLKEKTSKYVAYGGK----LDSSRFVEYWIPVQISNVQLEQYCGTLLSK--SL 112
DA + L L + + Y+ K D E I V++S+VQLE Y L +L
Sbjct: 654 DAQEKLQDLHKSIAPYILRRTKETVESDLPPKTEKIIRVELSDVQLEYYKNILTRNYAAL 713
Query: 113 SLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQ 172
S + KN L +I++ +K +HPY+ + +L + + + +SGK+
Sbjct: 714 SDATGQKNS----LLNIMMELKKVSNHPYMFAGAEDRVLAGSTRREDQIKGLIASSGKMM 769
Query: 173 LLDTMLSELKNQGSRVIILFQIL 195
LLD +L++L+ G RV+I Q++
Sbjct: 770 LLDQLLTKLRKDGHRVLIFSQMV 792
>gi|350645258|emb|CCD60039.1| hypothetical protein Smp_130470 [Schistosoma mansoni]
Length = 3580
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV---- 143
E + V+++N+Q ++Y ++ ++ S + L +I++ RKCC+HP+L+
Sbjct: 1407 ETVVEVELTNIQ-KKYYRAIMERNFSFLCKGSSTNAPNLMNIMMELRKCCNHPFLIKGAE 1465
Query: 144 DKSLQSLLVKDLELAE---YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
D L D L+E V ASGKL L+ +L +L+ G +V+I Q++ +
Sbjct: 1466 DAILSEFQANDNTLSEDDLTFRTMVYASGKLVLIHKLLPKLRADGHKVLIFSQMIRV 1522
>gi|124802575|ref|XP_001347516.1| Chromodomain-helicase-DNA-binding protein 1 homolog, putative
[Plasmodium falciparum 3D7]
gi|23495097|gb|AAN35429.1| Chromodomain-helicase-DNA-binding protein 1 homolog, putative
[Plasmodium falciparum 3D7]
Length = 3328
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q+E Y +L+K+ + L +I + +K C+HP+L +
Sbjct: 1540 VERILRVELSPIQIEYY-KNILTKNYEQLAKASGGAKNSLQNICMELKKVCNHPFLCAEP 1598
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L KD EY + V +SGK+ LL+ +L LK +G+RV+I Q++
Sbjct: 1599 LD----KD----EYKERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMV 1639
>gi|256073356|ref|XP_002572997.1| hypothetical protein [Schistosoma mansoni]
Length = 3580
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV---- 143
E + V+++N+Q ++Y ++ ++ S + L +I++ RKCC+HP+L+
Sbjct: 1407 ETVVEVELTNIQ-KKYYRAIMERNFSFLCKGSSTNAPNLMNIMMELRKCCNHPFLIKGAE 1465
Query: 144 DKSLQSLLVKDLELAE---YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
D L D L+E V ASGKL L+ +L +L+ G +V+I Q++ +
Sbjct: 1466 DAILSEFQANDNTLSEDDLTFRTMVYASGKLVLIHKLLPKLRADGHKVLIFSQMIRV 1522
>gi|255072403|ref|XP_002499876.1| SNF2 super family [Micromonas sp. RCC299]
gi|226515138|gb|ACO61134.1| SNF2 super family [Micromonas sp. RCC299]
Length = 2637
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 126 LHDILISARKCCDHPYL---VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELK 182
L +L+ RKCC+HPYL D + V++L V+ASGKL +LD +L LK
Sbjct: 792 LQSLLMQLRKCCNHPYLFAGTDVPEDGVPVEEL---------VEASGKLAVLDRILKRLK 842
Query: 183 NQGSRVIILFQ 193
+QG RV++ Q
Sbjct: 843 DQGHRVVLFSQ 853
>gi|302816879|ref|XP_002990117.1| hypothetical protein SELMODRAFT_131060 [Selaginella moellendorffii]
gi|300142130|gb|EFJ08834.1| hypothetical protein SELMODRAFT_131060 [Selaginella moellendorffii]
Length = 700
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S VQ E Y LL+K+ L ++ +I++ RK C+HPYL+ +
Sbjct: 249 VELSAVQAE-YYRALLTKNYQLLRQGTKSQQSMI-NIIMQLRKVCNHPYLIPGT-----E 301
Query: 153 KDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ E+L ++ +KAS KL LL +ML LK +G RV+I Q+
Sbjct: 302 PESGTGEFLHEMRIKASAKLTLLHSMLGSLKKEGHRVLIFSQM 344
>gi|156399887|ref|XP_001638732.1| predicted protein [Nematostella vectensis]
gi|156225855|gb|EDO46669.1| predicted protein [Nematostella vectensis]
Length = 911
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 26/195 (13%)
Query: 7 KQEILFSLPTSREKLDGELCDASIAKQTTEYHNMP---SLHESRGDVHRKDDLMVDAIDN 63
K ++ SLP +E L A + + TE++ ++ + GD K + V+ I +
Sbjct: 532 KTDVELSLPPKKEVL----VRAPLTSKQTEFYRAALDKTILDIVGDNKDKKEDKVE-ISS 586
Query: 64 LGSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKN--- 120
G K K + + Y D + +E +L + TL +C+P +
Sbjct: 587 TGRKKRKGRRNINYKIFDDENGSIE----------ELAEELATLEKSRREICTPSQKSST 636
Query: 121 -DPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLS 179
D + +IL+ RKCC+HPYL++ L + + ++ E L V+ SGK+ LLD M+
Sbjct: 637 YDISIKITNILMLLRKCCNHPYLLEYPLDPV-TQQYKIDEEL---VRCSGKMLLLDQMVP 692
Query: 180 ELKNQGSRVIILFQI 194
LK +G +++I Q+
Sbjct: 693 ALKRRGHKILIFSQM 707
>gi|327271626|ref|XP_003220588.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Anolis
carolinensis]
Length = 2660
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S N + L + ++ RKCC+HPYL++ +
Sbjct: 674 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGA 732
Query: 147 LQSLL--VKDLELAEYLDVG----VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + LD ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 733 EEKILEDFRKTHSPDALDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 787
>gi|219120392|ref|XP_002180935.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407651|gb|EEC47587.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 970
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV----DKSLQ 148
V +S +Q + Y LL S+ + + +I++ RKCC HPYL D++L
Sbjct: 384 VGMSKIQKQLYKKLLLRDLDSITGKVSGKNRTAVLNIVMQLRKCCGHPYLFEGVEDRTLD 443
Query: 149 SLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L E+L V+ GKL ++D +L LK++GSRV+I Q+
Sbjct: 444 PL-------GEHL---VENCGKLSMVDKLLKRLKSRGSRVLIFTQM 479
>gi|449472625|ref|XP_002193588.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Taeniopygia
guttata]
Length = 2889
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL+ +
Sbjct: 1092 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA 1150
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1151 EEKILGEFKETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1205
>gi|395545881|ref|XP_003774825.1| PREDICTED: probable global transcription activator SNF2L1
[Sarcophilus harrisii]
Length = 1004
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 352 EVKIYLGLSKMQREWYTRILMKDIDILNSVGKTDKMRLL-NILMQLRKCCNHPYLFDGAE 410
Query: 148 QS-LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D + V SGK+ LD +L++LK Q SRV+I Q+
Sbjct: 411 PGPPYTTDAHI-------VNNSGKMVALDKLLAKLKEQESRVLIFSQM 451
>gi|297698733|ref|XP_002826464.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9 [Pongo abelii]
Length = 2898
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|153791718|ref|NP_001093467.1| probable global transcription activator SNF2L1 [Danio rerio]
Length = 1036
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + +S +Q E Y L+ L S K D + +L +IL+ RKCC+HPYL D +
Sbjct: 371 EVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQLRKCCNHPYLFDGAE 429
Query: 148 QS-LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
D L V SGK+ LD +L +++ QGSRV+I Q +L I C
Sbjct: 430 PGPPYTTDTHL-------VINSGKMVALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCM 482
Query: 204 NEILGYC 210
YC
Sbjct: 483 WRGFEYC 489
>gi|119603200|gb|EAW82794.1| chromodomain helicase DNA binding protein 9, isoform CRA_b [Homo
sapiens]
Length = 2785
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|426252813|ref|XP_004020097.1| PREDICTED: lymphoid-specific helicase isoform 2 [Ovis aries]
Length = 805
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 65 GSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG 124
G K +T K V Y D +E I V E+ T++ S+ P++++
Sbjct: 473 GRPKRRTRKSVDYSKIDDFPNELEKLISQIQPEVDRER---TIVETSV----PIESEVNL 525
Query: 125 VLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +
Sbjct: 526 KLQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKTR 581
Query: 185 GSRVIILFQI 194
G +V++ Q+
Sbjct: 582 GHKVLLFSQM 591
>gi|345481883|ref|XP_001605650.2| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Nasonia vitripennis]
Length = 2009
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 964 EFIVRVELSPMQ-KKYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAAS 1022
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
Q E + +KA+GKL LL ML +L++ G RV+I Q+
Sbjct: 1023 QEAPTGPNGNYETSAL-IKAAGKLVLLSRMLKKLRDDGHRVLIFSQM 1068
>gi|344235901|gb|EGV92004.1| Chromodomain-helicase-DNA-binding protein 9 [Cricetulus griseus]
Length = 2271
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 465 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 523
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 524 EEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 578
>gi|320169022|gb|EFW45921.1| chromodomain-helicase-DNA-binding protein 7 [Capsaspora owczarzaki
ATCC 30864]
Length = 2669
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V+++ +Q + Y L L + + L +I++ RKCC+HPYL+ +
Sbjct: 1145 ETIIEVELTPIQKKYYQAILGRNFEFLAKGCNKNDMPSLMNIVMELRKCCNHPYLIGGAE 1204
Query: 148 QSLLVK-------DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + A L ++ASGKL L+D +L L+ G +V+I Q++
Sbjct: 1205 EKILGEIYGPNFYSTSPATLLLTLIQASGKLVLIDKLLKRLRENGHKVLIFSQMV 1259
>gi|432916520|ref|XP_004079330.1| PREDICTED: uncharacterized protein LOC101165345 [Oryzias latipes]
Length = 3266
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 21/126 (16%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP--------VGVLHDILISARKCCDH 139
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+H
Sbjct: 1300 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGGAGGGGGSGAASVPNLLNTMMELRKCCNH 1358
Query: 140 PYLVDKSLQSLLVK---------DL-ELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVI 189
PYL++ + + ++ + D+ E+A L ++A+GKL L+D +L +LK G RV+
Sbjct: 1359 PYLINGAEEKIIEEFRESHGGRTDVPEMA--LQAMIQAAGKLVLIDKLLPKLKAGGHRVL 1416
Query: 190 ILFQIL 195
+ Q++
Sbjct: 1417 VFSQMV 1422
>gi|397502864|ref|XP_003846159.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9 [Pan paniscus]
Length = 2425
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 621 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 679
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 680 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 734
>gi|348505811|ref|XP_003440454.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2-like [Oreochromis niloticus]
Length = 1812
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S Q + Y L +L + G L +I++ +KCC+H +L+ +
Sbjct: 731 VEQILRVEMSAQQKQFYKWILTRNYKALAKGTRGSSAGFL-NIVMELKKCCNHSFLIKQP 789
Query: 147 LQSLLVKDLELA-EYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
D E E+L V+ SGKL LLD +L+ L+ +G+RV+I Q++
Sbjct: 790 EDG----DAETQQEHLQALVRGSGKLVLLDKLLTRLRERGNRVLIFSQMV 835
>gi|444725589|gb|ELW66150.1| Chromodomain-helicase-DNA-binding protein 9 [Tupaia chinensis]
Length = 1636
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1020 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1078
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1079 EEKILGEFRDTYNPTASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1133
>gi|33641444|gb|AAQ24287.1| chromatin remodeling factor CHROM1 [Homo sapiens]
gi|219521584|gb|AAI44623.1| CHD9 protein [Homo sapiens]
Length = 2897
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|71891786|dbj|BAA20767.3| KIAA0308 [Homo sapiens]
Length = 2759
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 972 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1030
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1031 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1085
>gi|351704328|gb|EHB07247.1| Chromodomain-helicase-DNA-binding protein 9, partial [Heterocephalus
glaber]
Length = 1573
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|215273951|sp|Q3L8U1.2|CHD9_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 9;
Short=CHD-9; AltName: Full=ATP-dependent helicase CHD9;
AltName: Full=Chromatin-related mesenchymal modulator;
Short=CReMM; AltName: Full=Chromatin-remodeling factor
CHROM1; AltName: Full=Kismet homolog 2; AltName:
Full=PPAR-alpha-interacting complex protein 320 kDa;
AltName: Full=Peroxisomal proliferator-activated receptor
A-interacting complex 320 kDa protein
gi|187954623|gb|AAI40816.1| CHD9 protein [Homo sapiens]
Length = 2897
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|170592228|ref|XP_001900871.1| CHD4 protein [Brugia malayi]
gi|158591738|gb|EDP30342.1| CHD4 protein, putative [Brugia malayi]
Length = 1846
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q ++Y +L+++ SP L +I++ +KCC+HPYL K+ S+
Sbjct: 870 VRVELSPMQ-KKYYKNILTRNFEALSPKGGGSQISLINIIMDLKKCCNHPYLFPKA--SI 926
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCENEI 206
L+ Y VKASGK LL ML +LK QG RV+I Q +L I CENE
Sbjct: 927 EAPKLKSGIYEGTALVKASGKFVLLQKMLKKLKEQGHRVLIFSQMTKMLDIMEDFCENEG 986
Query: 207 LGY 209
Y
Sbjct: 987 YKY 989
>gi|414886764|tpg|DAA62778.1| TPA: putative homeodomain-like transcription factor superfamily
protein [Zea mays]
Length = 2379
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
+E +PV+++++Q E Y +L+K+ + L+N G H +I++ RK C+HPYL
Sbjct: 1084 IERMVPVELTSIQAE-YYRAMLTKNYQV---LRNIGKGGAHQSLLNIVMQLRKVCNHPYL 1139
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + + E+L ++ +KAS KL LL ML L +G RV+I Q+
Sbjct: 1140 IPGT-----EPESGSPEFLHEMRIKASAKLTLLHLMLKILHKEGHRVLIFSQM 1187
>gi|403292582|ref|XP_003937317.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Saimiri
boliviensis boliviensis]
Length = 2898
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|402908369|ref|XP_003916918.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
[Papio anubis]
Length = 2901
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDAYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|361124016|gb|EHK96142.1| putative Chromatin remodeling factor mit1 [Glarea lozoyensis 74030]
Length = 994
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 62 DNLGSLKEKTSKYVAYGGKL----DSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLC-- 115
DNL L++ + KL D + +PV +S VQ + Y ++L+K+ L
Sbjct: 594 DNLPELQDLIRPFFLRRTKLLVLKDLPTMAQVILPVSMSVVQKKLY-KSILAKNPQLIKS 652
Query: 116 ------SPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASG 169
+ L+ G L++IL+ RKC HP++ +++ V + + L + AS
Sbjct: 653 IFGQRKTDLRPTERGNLNNILMQLRKCLCHPFIYSSAIEETSVSEEAMHRNL---IDASS 709
Query: 170 KLQLLDTMLSELKNQGSRVIILFQIL 195
K QLL+ ML +L+++G RV++ Q L
Sbjct: 710 KFQLLELMLPKLRDRGHRVLLFSQFL 735
>gi|281346617|gb|EFB22201.1| hypothetical protein PANDA_000001 [Ailuropoda melanoleuca]
Length = 2901
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1097 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1155
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1156 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1210
>gi|119603201|gb|EAW82795.1| chromodomain helicase DNA binding protein 9, isoform CRA_c [Homo
sapiens]
Length = 2349
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 563 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 621
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 622 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 676
>gi|441597794|ref|XP_003263031.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Nomascus
leucogenys]
Length = 2612
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|431914122|gb|ELK15381.1| Chromodomain-helicase-DNA-binding protein 9 [Pteropus alecto]
Length = 2885
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1097 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1155
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1156 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1210
>gi|395839421|ref|XP_003792588.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Otolemur
garnettii]
Length = 2898
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|296231077|ref|XP_002807783.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9-like [Callithrix jacchus]
Length = 2896
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|95147342|ref|NP_079410.4| chromodomain-helicase-DNA-binding protein 9 [Homo sapiens]
Length = 2881
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|338723330|ref|XP_001915417.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9-like [Equus caballus]
Length = 2826
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1097 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1155
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1156 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1210
>gi|114662481|ref|XP_510966.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 5 [Pan
troglodytes]
gi|410050324|ref|XP_003952892.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Pan
troglodytes]
gi|410303510|gb|JAA30355.1| chromodomain helicase DNA binding protein 9 [Pan troglodytes]
Length = 2882
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|345794276|ref|XP_535304.3| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
[Canis lupus familiaris]
Length = 2886
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1097 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1155
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1156 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1210
>gi|355757747|gb|EHH61272.1| Chromodomain-helicase-DNA-binding protein 9 [Macaca fascicularis]
Length = 2833
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1019 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1077
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1078 EEKILGEFRDAYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1132
>gi|297283992|ref|XP_002808345.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9-like [Macaca mulatta]
Length = 2901
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDAYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|87130801|gb|ABD24032.1| PRIC320 isoform 1 [Homo sapiens]
Length = 2881
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|440910037|gb|ELR59871.1| Chromodomain-helicase-DNA-binding protein 9 [Bos grunniens mutus]
Length = 2906
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1096 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1154
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1155 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1209
>gi|410261570|gb|JAA18751.1| chromodomain helicase DNA binding protein 9 [Pan troglodytes]
Length = 2883
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|354471657|ref|XP_003498057.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Cricetulus
griseus]
Length = 2864
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1096 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1154
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1155 EEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1209
>gi|410343035|gb|JAA40464.1| chromodomain helicase DNA binding protein 9 [Pan troglodytes]
Length = 2883
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|363738135|ref|XP_414088.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9 [Gallus gallus]
Length = 2875
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL+ +
Sbjct: 1092 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA 1150
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1151 EEKILGEFKETYNPTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1205
>gi|410225536|gb|JAA09987.1| chromodomain helicase DNA binding protein 9 [Pan troglodytes]
Length = 2883
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|119603203|gb|EAW82797.1| chromodomain helicase DNA binding protein 9, isoform CRA_e [Homo
sapiens]
Length = 2823
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1037 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1095
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1096 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1150
>gi|426242344|ref|XP_004015033.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
[Ovis aries]
Length = 2899
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1096 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1154
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1155 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1209
>gi|395820848|ref|XP_003783770.1| PREDICTED: lymphoid-specific helicase isoform 3 [Otolemur
garnettii]
Length = 724
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 65 GSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG 124
G K +T K + Y D +E I + V E+ +++ P++++
Sbjct: 392 GRPKRRTRKSINYSKVDDFPNELEKLISQIQTEVDQERTV-------VAVNIPVESEVNL 444
Query: 125 VLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +
Sbjct: 445 KLQNIMMLLRKCCNHPYLIEYPIDP-ITQEFKVDEEL---VTNSGKFLILDRMLPELKKR 500
Query: 185 GSRVIILFQI 194
G +V++ Q+
Sbjct: 501 GHKVLLFSQM 510
>gi|312077956|ref|XP_003141528.1| CHromoDomain protein family member [Loa loa]
Length = 1696
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q ++Y +L+++ SP L +I++ +KCC+HPYL K+ S+
Sbjct: 725 VRVELSPMQ-KKYYKNILTRNFEALSPKGGGSQISLINIIMDLKKCCNHPYLFPKA--SI 781
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCENEI 206
L+ Y VKASGK LL ML +LK QG RV+I Q +L I CENE
Sbjct: 782 EAPKLKNGIYEGTALVKASGKFVLLQKMLKKLKEQGHRVLIFSQMTKMLDIMEDFCENEG 841
Query: 207 LGY 209
Y
Sbjct: 842 YKY 844
>gi|77404417|ref|NP_796198.1| chromodomain-helicase-DNA-binding protein 9 [Mus musculus]
gi|76782010|gb|AAZ73184.2| ciprofibrate-bound protein PRIC320 [Mus musculus]
Length = 2869
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1094 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1152
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1153 EEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1207
>gi|410983505|ref|XP_003998079.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9 [Felis catus]
Length = 2885
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1097 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1155
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1156 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1210
>gi|328769067|gb|EGF79112.1| hypothetical protein BATDEDRAFT_17244 [Batrachochytrium
dendrobatidis JAM81]
Length = 988
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +I++ RKCC+HPYL D + D L V SGK+ LLD +L LK Q
Sbjct: 396 LQNIVMQLRKCCNHPYLFDGAEPGPPYTTDQHL-------VDNSGKMALLDKLLQHLKAQ 448
Query: 185 GSRVIILFQ---ILIIRAKVCENEILGYC 210
GSRV++ Q +L I C + YC
Sbjct: 449 GSRVLLFSQMSRVLDILEDYCIWKEFDYC 477
>gi|149642515|ref|XP_001505934.1| PREDICTED: lymphoid-specific helicase [Ornithorhynchus anatinus]
Length = 823
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ L ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 545 LQNIMMLLRKCCNHPYLIEYPLDP-ATQEFQVDEEL---VTNSGKFLILDRMLPELKKRG 600
Query: 186 SRVIILFQILII 197
+V++ Q+ ++
Sbjct: 601 HKVLLFSQMTMM 612
>gi|393911013|gb|EJD76123.1| LET-418 protein [Loa loa]
Length = 1755
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q ++Y +L+++ SP L +I++ +KCC+HPYL K+ S+
Sbjct: 784 VRVELSPMQ-KKYYKNILTRNFEALSPKGGGSQISLINIIMDLKKCCNHPYLFPKA--SI 840
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCENEI 206
L+ Y VKASGK LL ML +LK QG RV+I Q +L I CENE
Sbjct: 841 EAPKLKNGIYEGTALVKASGKFVLLQKMLKKLKEQGHRVLIFSQMTKMLDIMEDFCENEG 900
Query: 207 LGY 209
Y
Sbjct: 901 YKY 903
>gi|219518574|gb|AAI45220.1| Chd9 protein [Mus musculus]
Length = 2884
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1094 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1152
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1153 EEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1207
>gi|426242346|ref|XP_004015034.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 2
[Ovis aries]
Length = 2883
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1096 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1154
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1155 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1209
>gi|355710194|gb|EHH31658.1| Chromodomain-helicase-DNA-binding protein 9 [Macaca mulatta]
Length = 2901
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDAYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|344289261|ref|XP_003416363.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9-like [Loxodonta africana]
Length = 2887
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1098 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1156
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1157 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1211
>gi|261197277|ref|XP_002625041.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis
SLH14081]
gi|239595671|gb|EEQ78252.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis
SLH14081]
Length = 1542
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVL--------HDILISARKCCDHPYL 142
+PV +S VQ + Y L + S K P G L ++IL+ RKC HP++
Sbjct: 925 LPVTMSVVQKKLYKSILAKNPQLIQSIFKKTPGGTLKRTEHHNLNNILMQLRKCLCHPFV 984
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
K+++ + L V+AS KLQLL+ +L +L+ +G RV+I Q L
Sbjct: 985 YSKAIEERAISAALSHRNL---VEASSKLQLLEMLLPKLQERGHRVLIFSQFL 1034
>gi|301752864|ref|XP_002912282.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like
[Ailuropoda melanoleuca]
Length = 2885
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1097 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1155
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1156 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1210
>gi|329663886|ref|NP_001192579.1| chromodomain-helicase-DNA-binding protein 9 [Bos taurus]
gi|296478067|tpg|DAA20182.1| TPA: kismet-like [Bos taurus]
Length = 2883
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1096 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1154
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1155 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1209
>gi|189240851|ref|XP_001812556.1| PREDICTED: similar to chromodomain helicase-DNA-binding protein 3
[Tribolium castaneum]
Length = 1966
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 965 EFIVRVELSPMQ-KKYYKYILTRNFEALNPKGGGQSVSLLNIMMDLKKCCNHPYLFPVAA 1023
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + + + +KASGKL LL ML L+ QG RV+I Q+
Sbjct: 1024 EEAPIGPTGGYDIQSL-IKASGKLVLLAKMLRILREQGHRVLIFSQM 1069
>gi|327351572|gb|EGE80429.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 1542
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVL--------HDILISARKCCDHPYL 142
+PV +S VQ + Y L + S K P G L ++IL+ RKC HP++
Sbjct: 925 LPVTMSVVQKKLYKSILAKNPQLIQSIFKKTPGGTLKRTEHHNLNNILMQLRKCLCHPFV 984
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
K+++ + L V+AS KLQLL+ +L +L+ +G RV+I Q L
Sbjct: 985 YSKAIEERAISAALSHRNL---VEASSKLQLLEMLLPKLQERGHRVLIFSQFL 1034
>gi|320166126|gb|EFW43025.1| lymphoid specific helicase variant4 [Capsaspora owczarzaki ATCC
30864]
Length = 835
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Query: 106 TLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQS--LLVKDLELAEYLDV 163
++ ++ ++ +P N + L ++L+ RKCC+HPYL++ L S L D EL
Sbjct: 571 AVMPRTPTVKTPASNTSIK-LQNVLMQLRKCCNHPYLLNFPLDSAGLPRVDEEL------ 623
Query: 164 GVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++A GKL+LLD +L L+ +G +V+I Q+
Sbjct: 624 -IQACGKLRLLDELLPALRRKGHKVLIFSQM 653
>gi|402908371|ref|XP_003916919.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 2
[Papio anubis]
Length = 2885
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDAYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|348583619|ref|XP_003477570.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9-like [Cavia porcellus]
Length = 2878
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1092 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1150
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1151 EEKILGEFRDTYSPTASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1205
>gi|325188110|emb|CCA22651.1| chromodomainhelicaseDNAbinding protein putative [Albugo laibachii
Nc14]
Length = 1883
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV---- 143
E I V+++ +Q +QY + K+ S + + L +I + R+CC+HP+L+
Sbjct: 1128 ETIIAVELTTLQ-KQYYRAIYDKNQSFLYRGIQNGLPRLVNIQLQLRQCCNHPFLIKGVE 1186
Query: 144 DKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILI---IRAK 200
D+ LQ L + + +D ++ SGK L+ +L +LK +G +V+I Q L + +
Sbjct: 1187 DRELQD-LGPEPTMDRIMDKTIQCSGKFVLVSKLLPKLKREGRKVLIFSQFLKQLDLLER 1245
Query: 201 VCENEILGY 209
CE GY
Sbjct: 1246 YCEYHGFGY 1254
>gi|270013510|gb|EFA09958.1| hypothetical protein TcasGA2_TC012115 [Tribolium castaneum]
Length = 1969
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ +P L +I++ +KCC+HPYL +
Sbjct: 968 EFIVRVELSPMQ-KKYYKYILTRNFEALNPKGGGQSVSLLNIMMDLKKCCNHPYLFPVAA 1026
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + + + +KASGKL LL ML L+ QG RV+I Q+
Sbjct: 1027 EEAPIGPTGGYDIQSL-IKASGKLVLLAKMLRILREQGHRVLIFSQM 1072
>gi|239606660|gb|EEQ83647.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis ER-3]
Length = 1542
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVL--------HDILISARKCCDHPYL 142
+PV +S VQ + Y L + S K P G L ++IL+ RKC HP++
Sbjct: 925 LPVTMSVVQKKLYKSILAKNPQLIQSIFKKTPGGTLKRTEHHNLNNILMQLRKCLCHPFV 984
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
K+++ + L V+AS KLQLL+ +L +L+ +G RV+I Q L
Sbjct: 985 YSKAIEERAISAALSHRNL---VEASSKLQLLEMLLPKLQERGHRVLIFSQFL 1034
>gi|195354288|ref|XP_002043630.1| GM15785 [Drosophila sechellia]
gi|194127798|gb|EDW49841.1| GM15785 [Drosophila sechellia]
Length = 1921
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 28/176 (15%)
Query: 19 EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYG 78
+ GE D S +Q H M H R L D + N+ S E
Sbjct: 869 QAFQGEFADVSKEEQVKRLHEMLGPHMLR-------RLKTDVLKNMPSKSE--------- 912
Query: 79 GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
+ + V++S +Q +++ +L+K+ + L +I++ +KCC+
Sbjct: 913 ----------FIVRVELSAMQ-KKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCN 961
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HPYL + + L E ++ KA+GKL LL ML +LK Q RV+I Q+
Sbjct: 962 HPYLFPSAAEEATTAAGGLYE-INSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQM 1016
>gi|148679122|gb|EDL11069.1| mCG141427 [Mus musculus]
Length = 2699
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1094 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1152
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1153 EEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1207
>gi|94707512|sp|Q8BYH8.2|CHD9_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 9;
Short=CHD-9; AltName: Full=ATP-dependent helicase CHD9;
AltName: Full=PPAR-alpha-interacting complex protein 320
kDa; AltName: Full=Peroxisomal proliferator-activated
receptor A-interacting complex 320 kDa protein
Length = 2885
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1094 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1152
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1153 EEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1207
>gi|49022903|dbj|BAC41410.3| mKIAA0308 protein [Mus musculus]
Length = 1890
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 115 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 173
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 174 EEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 228
>gi|390355905|ref|XP_003728651.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 1
[Strongylocentrotus purpuratus]
Length = 1865
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S++Q + Y L +LC LK + + +I++ +KCC+H
Sbjct: 773 VERILRVEMSSLQKQYYKFILTRNFKALCKGLKGNTSSFI-NIMMELKKCCNH------- 824
Query: 147 LQSLLVKDLELAEYLDVG--VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
SLL++ E D+ ++ SGKL LLD +L+ L+ +G RV+I Q++
Sbjct: 825 --SLLIRPPEDESDPDLKYIIRGSGKLVLLDKLLTRLQERGHRVLIFSQMV 873
>gi|149733277|ref|XP_001502820.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Equus
caballus]
Length = 2717
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S N + L + ++ RKCC+HPYL++ +
Sbjct: 694 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGA 752
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 753 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 807
>gi|326927241|ref|XP_003209801.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like
[Meleagris gallopavo]
Length = 2782
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL+ +
Sbjct: 999 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA 1057
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1058 EEKILGEFKETYSPTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1112
>gi|119603204|gb|EAW82798.1| chromodomain helicase DNA binding protein 9, isoform CRA_f [Homo
sapiens]
Length = 336
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 209 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 267
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 268 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 322
>gi|414886765|tpg|DAA62779.1| TPA: putative homeodomain-like transcription factor superfamily
protein [Zea mays]
Length = 2186
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
+E +PV+++++Q E Y +L+K+ + L+N G H +I++ RK C+HPYL
Sbjct: 886 IERMVPVELTSIQAE-YYRAMLTKNYQV---LRNIGKGGAHQSLLNIVMQLRKVCNHPYL 941
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + + E+L ++ +KAS KL LL ML L +G RV+I Q+
Sbjct: 942 IPGT-----EPESGSPEFLHEMRIKASAKLTLLHLMLKILHKEGHRVLIFSQM 989
>gi|358419117|ref|XP_003584131.1| PREDICTED: lymphoid-specific helicase [Bos taurus]
Length = 816
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 65 GSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG 124
G K +T K V Y D +E I V E+ T++ S+ P++++
Sbjct: 484 GRPKRRTRKSVDYSKIDDFPNELEKLISQIQPEVDRER---TIVETSV----PIESEVNL 536
Query: 125 VLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +
Sbjct: 537 KLQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKVDEEL---VTNSGKFLILDRMLPELKTR 592
Query: 185 GSRVIILFQI 194
G +V++ Q+
Sbjct: 593 GHKVLLFSQM 602
>gi|395820850|ref|XP_003783771.1| PREDICTED: lymphoid-specific helicase isoform 4 [Otolemur
garnettii]
Length = 692
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 65 GSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG 124
G K +T K + Y D +E I + V E+ +++ P++++
Sbjct: 360 GRPKRRTRKSINYSKVDDFPNELEKLISQIQTEVDQERTV-------VAVNIPVESEVNL 412
Query: 125 VLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +
Sbjct: 413 KLQNIMMLLRKCCNHPYLIEYPIDP-ITQEFKVDEEL---VTNSGKFLILDRMLPELKKR 468
Query: 185 GSRVIILFQI 194
G +V++ Q+
Sbjct: 469 GHKVLLFSQM 478
>gi|442633513|ref|NP_001262078.1| Mi-2, isoform D [Drosophila melanogaster]
gi|440216038|gb|AGB94771.1| Mi-2, isoform D [Drosophila melanogaster]
Length = 1973
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 19 EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYG 78
+ GE D S +Q H M H R L D + N+ S
Sbjct: 921 QAFQGEFADVSKEEQVKRLHEMLGPHMLR-------RLKTDVLKNMPS------------ 961
Query: 79 GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
S F+ + V++S +Q +++ +L+K+ + L +I++ +KCC+
Sbjct: 962 ----KSEFI---VRVELSAMQ-KKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCN 1013
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HPYL + + L E ++ KA+GKL LL ML +LK Q RV+I Q+
Sbjct: 1014 HPYLFPSAAEEATTAAGGLYE-INSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQM 1068
>gi|390355907|ref|XP_003728652.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 2
[Strongylocentrotus purpuratus]
gi|390355909|ref|XP_781410.3| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 3
[Strongylocentrotus purpuratus]
Length = 1835
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S++Q + Y L +LC LK + + +I++ +KCC+H
Sbjct: 773 VERILRVEMSSLQKQYYKFILTRNFKALCKGLKGNTSSFI-NIMMELKKCCNH------- 824
Query: 147 LQSLLVKDLELAEYLDVG--VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
SLL++ E D+ ++ SGKL LLD +L+ L+ +G RV+I Q++
Sbjct: 825 --SLLIRPPEDESDPDLKYIIRGSGKLVLLDKLLTRLQERGHRVLIFSQMV 873
>gi|320170047|gb|EFW46946.1| helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1078
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I + ++ Q E Y G LL K L + + + V L +IL+ RKCC+HPYL D +
Sbjct: 407 ETKIYIGLTPKQREVYQGILL-KDLDVVNSGNANKVR-LSNILMQLRKCCNHPYLFDGTE 464
Query: 148 QS-LLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D L + A GK+ +LD +L +L+ QGSRV+I Q+
Sbjct: 465 PGPPYTTDKHL-------LDACGKMSVLDKLLPKLQAQGSRVLIFSQM 505
>gi|4325130|gb|AAD17276.1| dMi-2 protein [Drosophila melanogaster]
Length = 1982
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 19 EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYG 78
+ GE D S +Q H M H R L D + N+ S
Sbjct: 930 QAFQGEFADVSKEEQVKRLHEMLGPHMLR-------RLKTDVLKNMPS------------ 970
Query: 79 GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
S F+ + V++S +Q +++ +L+K+ + L +I++ +KCC+
Sbjct: 971 ----KSEFI---VRVELSAMQ-KKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCN 1022
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HPYL + + L E ++ KA+GKL LL ML +LK Q RV+I Q+
Sbjct: 1023 HPYLFPSAAEEATTAAGGLYE-INSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQM 1077
>gi|328724512|ref|XP_001948282.2| PREDICTED: hypothetical protein LOC100164870 [Acyrthosiphon pisum]
Length = 4192
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E + V+++N+Q + Y G +L K+ S S + V L + ++ RKCC HPYL++ +
Sbjct: 1847 ETVVEVELTNIQKKYYRG-ILEKNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGA 1905
Query: 147 LQSLLVKDLELAE-----YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ L Y + +SGK+ L+D +L +LK+ G RV+I Q++
Sbjct: 1906 EDQIQYDYRNLNGDDPDVYYKALIHSSGKMVLIDKLLPKLKDNGHRVLIFSQMV 1959
>gi|24667055|ref|NP_649154.2| Mi-2, isoform A [Drosophila melanogaster]
gi|281366478|ref|NP_001163476.1| Mi-2, isoform C [Drosophila melanogaster]
gi|13124018|sp|O97159.2|CHDM_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein Mi-2 homolog;
AltName: Full=ATP-dependent helicase Mi-2; Short=dMi-2
gi|23093096|gb|AAF49099.2| Mi-2, isoform A [Drosophila melanogaster]
gi|272455249|gb|ACZ94747.1| Mi-2, isoform C [Drosophila melanogaster]
Length = 1982
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 19 EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYG 78
+ GE D S +Q H M H R L D + N+ S
Sbjct: 930 QAFQGEFADVSKEEQVKRLHEMLGPHMLR-------RLKTDVLKNMPS------------ 970
Query: 79 GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
S F+ + V++S +Q +++ +L+K+ + L +I++ +KCC+
Sbjct: 971 ----KSEFI---VRVELSAMQ-KKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCN 1022
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HPYL + + L E ++ KA+GKL LL ML +LK Q RV+I Q+
Sbjct: 1023 HPYLFPSAAEEATTAAGGLYE-INSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQM 1077
>gi|395820844|ref|XP_003783768.1| PREDICTED: lymphoid-specific helicase isoform 1 [Otolemur
garnettii]
Length = 822
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 65 GSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG 124
G K +T K + Y D +E I + V E+ +++ P++++
Sbjct: 490 GRPKRRTRKSINYSKVDDFPNELEKLISQIQTEVDQERTV-------VAVNIPVESEVNL 542
Query: 125 VLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +
Sbjct: 543 KLQNIMMLLRKCCNHPYLIEYPIDP-ITQEFKVDEEL---VTNSGKFLILDRMLPELKKR 598
Query: 185 GSRVIILFQI 194
G +V++ Q+
Sbjct: 599 GHKVLLFSQM 608
>gi|307136401|gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis melo subsp. melo]
Length = 2374
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV++S++Q E Y +L+K+ + L+N GV +I++ RK C+HPYL
Sbjct: 1041 TERMVPVELSSIQAEYYRA-MLTKNYQI---LRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1096
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + + E+L ++ +KAS KL LL +ML L +G RV++ Q+
Sbjct: 1097 IPGT-----EPESGSVEFLHEMRIKASAKLTLLHSMLKILHKEGHRVLLFSQM 1144
>gi|301761430|ref|XP_002916137.1| PREDICTED: lymphoid-specific helicase-like [Ailuropoda melanoleuca]
Length = 837
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK + DTML ELK +G
Sbjct: 559 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLIFDTMLPELKARG 614
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 615 HKVLLFSQM 623
>gi|395820852|ref|XP_003783772.1| PREDICTED: lymphoid-specific helicase isoform 5 [Otolemur
garnettii]
Length = 797
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 65 GSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG 124
G K +T K + Y D +E I + V E+ +++ P++++
Sbjct: 490 GRPKRRTRKSINYSKVDDFPNELEKLISQIQTEVDQERTV-------VAVNIPVESEVNL 542
Query: 125 VLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +
Sbjct: 543 KLQNIMMLLRKCCNHPYLIEYPIDP-ITQEFKVDEEL---VTNSGKFLILDRMLPELKKR 598
Query: 185 GSRVIILFQI 194
G +V++ Q+
Sbjct: 599 GHKVLLFSQM 608
>gi|398409150|ref|XP_003856040.1| SNF2 family DNA-dependent ATPase [Zymoseptoria tritici IPO323]
gi|339475925|gb|EGP91016.1| SNF2 family DNA-dependent ATPase [Zymoseptoria tritici IPO323]
Length = 1693
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPL-------KNDPVGVLHDILISARKCCDHPYLV 143
+PV +S VQ + Y ++ SK+ L + K+ G L +I++ RKC HP++
Sbjct: 1032 VPVSMSLVQKKLY-KSIYSKNPELMKAIFSAESNSKSTERGSLSNIIMQLRKCLCHPFVY 1090
Query: 144 DKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+S++ K++++A V AS KL+ L+ +L +L+ +G RV+I Q L
Sbjct: 1091 SRSIED---KNVDIASSHRNLVDASSKLKFLELLLPKLQQRGHRVLIFSQFL 1139
>gi|449304982|gb|EMD00989.1| hypothetical protein BAUCODRAFT_192112 [Baudoinia compniacensis
UAMH 10762]
Length = 1310
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 59 DAIDNLGSLKEKTSKYVAYGGKL----DSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSL 114
DA + L + S Y+ K D E I V++S+VQLE Y L +L
Sbjct: 372 DASKKIAELTDAISPYMIRRTKQKVEHDLPPKTEKIIRVELSDVQLEYYKNILTRNYAAL 431
Query: 115 CSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLL 174
+ K +L +I++ +K +HP++ + + L + L V SGK+ +L
Sbjct: 432 NAGSKAQKTSLL-NIMMELKKASNHPFMFPNAEERFLDGKDSREDQLKALVSTSGKMIVL 490
Query: 175 DTMLSELKNQGSRVIILFQIL 195
D +L++ K +G RV+I Q++
Sbjct: 491 DRLLAKFKQEGHRVLIFSQMV 511
>gi|326426828|gb|EGD72398.1| chromodomain helicase DNA binding protein 1 [Salpingoeca sp. ATCC
50818]
Length = 1534
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V +S Q +Q +++K+ + LK L ++++ +KCC+H L+D++
Sbjct: 817 VEKILRVGLSQSQ-KQIYKHIITKNYTALRSLKKGQKSSLVNVIMELKKCCNHASLIDQA 875
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
L D+ E + +K SGKL LLD +L L ++G RV+I Q++++
Sbjct: 876 --PLSNPDVSPTENMRNLLKGSGKLILLDKLLQRLHDKGHRVLIFSQMVLM 924
>gi|440571986|gb|AGC12539.1| GH21519p1 [Drosophila melanogaster]
Length = 1084
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 19 EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYG 78
+ GE D S +Q H M H R L D + N+ S
Sbjct: 931 QAFQGEFADVSKEEQVKRLHEMLGPHMLRR-------LKTDVLKNMPS------------ 971
Query: 79 GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
S F+ + V++S +Q +++ +L+K+ + L +I++ +KCC+
Sbjct: 972 ----KSEFI---VRVELSAMQ-KKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCN 1023
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HPYL + + L E ++ KA+GKL LL ML +LK Q RV+I Q+
Sbjct: 1024 HPYLFPSAAEEATTAAGGLYE-INSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQM 1078
>gi|62472261|ref|NP_001014591.1| Mi-2, isoform B [Drosophila melanogaster]
gi|61678453|gb|AAX52739.1| Mi-2, isoform B [Drosophila melanogaster]
Length = 1983
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 19 EKLDGELCDASIAKQTTEYHNMPSLHESRGDVHRKDDLMVDAIDNLGSLKEKTSKYVAYG 78
+ GE D S +Q H M H R L D + N+ S
Sbjct: 931 QAFQGEFADVSKEEQVKRLHEMLGPHMLR-------RLKTDVLKNMPS------------ 971
Query: 79 GKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCD 138
S F+ + V++S +Q +++ +L+K+ + L +I++ +KCC+
Sbjct: 972 ----KSEFI---VRVELSAMQ-KKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCN 1023
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
HPYL + + L E ++ KA+GKL LL ML +LK Q RV+I Q+
Sbjct: 1024 HPYLFPSAAEEATTAAGGLYE-INSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQM 1078
>gi|297490772|ref|XP_002698437.1| PREDICTED: lymphoid-specific helicase [Bos taurus]
gi|296472735|tpg|DAA14850.1| TPA: helicase, lymphoid specific-like [Bos taurus]
Length = 784
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 65 GSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG 124
G K +T K V Y D +E I V E+ T++ S+ P++++
Sbjct: 452 GRPKRRTRKSVDYSKIDDFPNELEKLISQIQPEVDRER---TIVETSV----PIESEVNL 504
Query: 125 VLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +
Sbjct: 505 KLQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKVDEEL---VTNSGKFLILDRMLPELKTR 560
Query: 185 GSRVIILFQI 194
G +V++ Q+
Sbjct: 561 GHKVLLFSQM 570
>gi|334311692|ref|XP_003339651.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9-like [Monodelphis domestica]
Length = 2881
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ + S V L + ++ RKCC+HPYL+ +
Sbjct: 1094 ETIIEVELTNIQ-KKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA 1152
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + E +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1153 EEKILGEFKESHNPAAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1207
>gi|395820846|ref|XP_003783769.1| PREDICTED: lymphoid-specific helicase isoform 2 [Otolemur
garnettii]
Length = 790
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 65 GSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG 124
G K +T K + Y D +E I + V E+ +++ P++++
Sbjct: 458 GRPKRRTRKSINYSKVDDFPNELEKLISQIQTEVDQERTV-------VAVNIPVESEVNL 510
Query: 125 VLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +
Sbjct: 511 KLQNIMMLLRKCCNHPYLIEYPIDP-ITQEFKVDEEL---VTNSGKFLILDRMLPELKKR 566
Query: 185 GSRVIILFQI 194
G +V++ Q+
Sbjct: 567 GHKVLLFSQM 576
>gi|253742393|gb|EES99228.1| Chromodomain helicase-DNA-binding protein, putative [Giardia
intestinalis ATCC 50581]
Length = 2636
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 21/110 (19%)
Query: 89 YWIPVQISNVQ--LEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV-DK 145
+ P+QIS + LEQ L +KS + L ++L+ RK C+HPY++ D
Sbjct: 1515 HMTPLQISCSEWLLEQNYEMLTAKSYNSVK---------LQNLLMQLRKVCNHPYIIHDL 1565
Query: 146 SLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L + +KD+ V SGK Q+LD +L +L ++G RV+I Q++
Sbjct: 1566 KLHTASLKDM---------VDGSGKFQVLDKLLDKLNSEGHRVLIFSQLI 1606
>gi|344279650|ref|XP_003411600.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 6-like [Loxodonta africana]
Length = 2772
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 749 ETIIEVELTNIQ-KKYYRAILEKNFSFLAKGANQHNMPNLINTMMELRKCCNHPYLINGA 807
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 808 EEKIL-EDFRKTHSPDASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 862
>gi|218199663|gb|EEC82090.1| hypothetical protein OsI_26092 [Oryza sativa Indica Group]
Length = 2275
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV+++++Q E Y +L+K+ + L+N G H +I++ RK C+HPYL
Sbjct: 927 TERMVPVELTSIQAE-YYRAMLTKNYQV---LRNIGKGGAHQSLLNIVMQLRKVCNHPYL 982
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + + E+L ++ +KAS KL LL +ML L G RV+I Q+
Sbjct: 983 IPGT-----EPESGSPEFLHEMRIKASAKLTLLHSMLKILHKDGHRVLIFSQM 1030
>gi|449486107|ref|XP_002195547.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
[Taeniopygia guttata]
Length = 2887
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S N + L + ++ RKCC+HPYL++ +
Sbjct: 895 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGA 953
Query: 147 LQSLLVKDL------ELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D E ++ L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 954 EEKIL-EDFRKTHCPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 1008
>gi|444722915|gb|ELW63587.1| Chromodomain-helicase-DNA-binding protein 3 [Tupaia chinensis]
Length = 2077
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 769 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 825
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 826 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 873
>gi|432105627|gb|ELK31821.1| Chromodomain-helicase-DNA-binding protein 3 [Myotis davidii]
Length = 1998
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 979 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1035
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1036 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1083
>gi|426384013|ref|XP_004058571.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
[Gorilla gorilla gorilla]
Length = 1966
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|426384011|ref|XP_004058570.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
[Gorilla gorilla gorilla]
Length = 2000
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|162318864|gb|AAI56473.1| Chromodomain helicase DNA binding protein 3 [synthetic construct]
Length = 2045
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 1026 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1082
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1083 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1130
>gi|52630322|ref|NP_005843.2| chromodomain-helicase-DNA-binding protein 3 isoform 2 [Homo sapiens]
gi|119610520|gb|EAW90114.1| chromodomain helicase DNA binding protein 3, isoform CRA_a [Homo
sapiens]
gi|119610522|gb|EAW90116.1| chromodomain helicase DNA binding protein 3, isoform CRA_a [Homo
sapiens]
Length = 1966
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|2645433|gb|AAB87383.1| CHD3 [Homo sapiens]
Length = 1944
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|3298562|gb|AAC39923.1| zinc-finger helicase [Homo sapiens]
Length = 2000
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|52630326|ref|NP_001005273.1| chromodomain-helicase-DNA-binding protein 3 isoform 1 [Homo sapiens]
gi|88911273|sp|Q12873.3|CHD3_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 3;
Short=CHD-3; AltName: Full=ATP-dependent helicase CHD3;
AltName: Full=Mi-2 autoantigen 240 kDa protein; AltName:
Full=Mi2-alpha; AltName: Full=Zinc finger helicase;
Short=hZFH
gi|119610521|gb|EAW90115.1| chromodomain helicase DNA binding protein 3, isoform CRA_b [Homo
sapiens]
Length = 2000
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|403274996|ref|XP_003929246.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1966
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|403274994|ref|XP_003929245.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
[Saimiri boliviensis boliviensis]
Length = 2000
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|402898650|ref|XP_003912333.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
[Papio anubis]
Length = 2000
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|395748521|ref|XP_002827042.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Pongo abelii]
Length = 1993
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 966 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1022
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1023 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1070
>gi|395533467|ref|XP_003768781.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Sarcophilus harrisii]
Length = 1971
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 956 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1012
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1013 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1060
>gi|383415425|gb|AFH30926.1| chromodomain-helicase-DNA-binding protein 3 isoform 1 [Macaca
mulatta]
Length = 1996
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 977 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1033
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1034 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1081
>gi|355568209|gb|EHH24490.1| hypothetical protein EGK_08151 [Macaca mulatta]
Length = 1931
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 911 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 967
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 968 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1015
>gi|348560832|ref|XP_003466217.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Cavia
porcellus]
Length = 1995
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 975 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1031
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1032 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1079
>gi|334323402|ref|XP_001369227.2| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Monodelphis
domestica]
Length = 2114
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 1132 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1188
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1189 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1236
>gi|332847234|ref|XP_003315413.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2 [Pan
troglodytes]
Length = 1966
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|332847232|ref|XP_003339343.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Pan
troglodytes]
Length = 2000
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|332847230|ref|XP_512012.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 3 [Pan
troglodytes]
Length = 2058
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 1039 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1095
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1096 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1143
>gi|332250910|ref|XP_003274592.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Nomascus leucogenys]
Length = 1985
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|291405109|ref|XP_002719030.1| PREDICTED: chromodomain helicase DNA binding protein 3-like
[Oryctolagus cuniculus]
Length = 1910
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 976 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1032
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1033 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1080
>gi|158420731|ref|NP_001005271.2| chromodomain-helicase-DNA-binding protein 3 isoform 3 [Homo sapiens]
Length = 2059
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 1040 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1096
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1097 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1144
>gi|109113157|ref|XP_001111066.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like isoform 2
[Macaca mulatta]
Length = 1981
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 963 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1019
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1020 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1067
>gi|402898652|ref|XP_003912334.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
[Papio anubis]
Length = 1966
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|397477893|ref|XP_003810301.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Pan paniscus]
Length = 2011
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 981 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1037
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1038 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1085
>gi|355753729|gb|EHH57694.1| hypothetical protein EGM_07385 [Macaca fascicularis]
Length = 1961
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 942 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 998
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 999 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1046
>gi|402881009|ref|XP_003904075.1| PREDICTED: LOW QUALITY PROTEIN: lymphoid-specific helicase [Papio
anubis]
Length = 869
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 599 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 654
Query: 186 SRVIILFQILII 197
+V++ Q+ I
Sbjct: 655 HKVLLFSQMTSI 666
>gi|344274941|ref|XP_003409273.1| PREDICTED: lymphoid-specific helicase [Loxodonta africana]
Length = 838
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK++G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKSRG 615
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 616 HKVLLFSQM 624
>gi|222637088|gb|EEE67220.1| hypothetical protein OsJ_24338 [Oryza sativa Japonica Group]
Length = 2258
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 14/113 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV+++++Q E Y +L+K+ + L+N G H +I++ RK C+HPYL
Sbjct: 910 TERMVPVELTSIQAE-YYRAMLTKNYQV---LRNIGKGGAHQSLLNIVMQLRKVCNHPYL 965
Query: 143 VDKSLQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + + E+L ++ +KAS KL LL +ML L G RV+I Q+
Sbjct: 966 IPGT-----EPESGSPEFLHEMRIKASAKLTLLHSMLKILHKDGHRVLIFSQM 1013
>gi|338716740|ref|XP_003363510.1| PREDICTED: lymphoid-specific helicase [Equus caballus]
Length = 739
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 461 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKTRG 516
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 517 HKVLLFSQM 525
>gi|302816250|ref|XP_002989804.1| hypothetical protein SELMODRAFT_428350 [Selaginella moellendorffii]
gi|300142370|gb|EFJ09071.1| hypothetical protein SELMODRAFT_428350 [Selaginella moellendorffii]
Length = 2150
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S VQ E Y LL+K+ L ++ +I++ RK C+HPYL+ +
Sbjct: 935 VELSAVQAE-YYRALLTKNYQLLRQGTKSQQSMI-NIIMQLRKVCNHPYLIPGT-----E 987
Query: 153 KDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ E+L ++ +KAS KL LL +ML LK +G RV+I Q+
Sbjct: 988 PESGTGEFLHEMRIKASAKLTLLHSMLGSLKKEGHRVLIFSQM 1030
>gi|109113159|ref|XP_001110923.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like isoform 1
[Macaca mulatta]
Length = 1947
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 963 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1019
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1020 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1067
>gi|338716742|ref|XP_003363511.1| PREDICTED: lymphoid-specific helicase [Equus caballus]
Length = 707
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 429 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKTRG 484
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 485 HKVLLFSQM 493
>gi|390462993|ref|XP_002806848.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3, partial [Callithrix jacchus]
Length = 1943
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 971 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1027
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1028 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1075
>gi|354469736|ref|XP_003497281.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3-like [Cricetulus griseus]
Length = 1959
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 997 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1053
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1054 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1101
>gi|428164865|gb|EKX33876.1| hypothetical protein GUITHDRAFT_45412, partial [Guillardia theta
CCMP2712]
Length = 754
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q Y L L K V L ++ + RKCC+HPYL+D + +
Sbjct: 422 VEVEMSQLQRTTYKSILEKNFDWLRKGAKGAQVPALRNVEMELRKCCNHPYLIDGVEEQV 481
Query: 151 LVKDLEL----------AEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
+ L+ A+ L + SGK+ LLD +L +L+ + RV+I Q + +
Sbjct: 482 CLARLKFLRQVRSHSSGADMLQQLIFHSGKMVLLDKILPKLRTEHHRVLIFSQFIRV 538
>gi|440637835|gb|ELR07754.1| hypothetical protein GMDG_00377 [Geomyces destructans 20631-21]
Length = 1536
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 48 GDVHRKDDLMVD---AIDNLGSLKEKTSKYVAYGGKL----DSSRFVEYWIPVQISNVQL 100
G+V +DD+ + A + + +L K Y+ K D E I V++S+VQL
Sbjct: 644 GEVDIEDDMDLTSEAAGEKIAALTTKIQPYILRRTKQKVENDLPPKTEKIIRVELSDVQL 703
Query: 101 EQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEY 160
E Y L +L K +L +I++ +K +HPY+ + +L +
Sbjct: 704 EYYKNILTRNYAALNEGSKGQKQSLL-NIMMELKKASNHPYMFPNAEDKILKGGDRREDM 762
Query: 161 LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L + +SGK+ LLD +L++LK RV+I Q++
Sbjct: 763 LKGLIASSGKMMLLDRLLTKLKKDNHRVLIFSQMV 797
>gi|426365609|ref|XP_004049861.1| PREDICTED: lymphoid-specific helicase isoform 5 [Gorilla gorilla
gorilla]
Length = 740
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 462 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 517
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 518 HKVLLFSQM 526
>gi|424513137|emb|CCO66721.1| predicted protein [Bathycoccus prasinos]
Length = 2464
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L+ +L+ RKCC+HPYL +Q V L+ ++ASGKL +LD +L +LK G
Sbjct: 544 LNSLLMQLRKCCNHPYLFSPGIQDEGVT-------LEDIIEASGKLSVLDRILIKLKENG 596
Query: 186 SRVIILFQI 194
RV+I Q
Sbjct: 597 HRVVIFSQF 605
>gi|49257014|dbj|BAD24805.1| lymphoid specific helicase variant10 [Homo sapiens]
Length = 782
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 615
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 616 HKVLLFSQM 624
>gi|307172263|gb|EFN63768.1| Chromodomain-helicase-DNA-binding protein 7 [Camponotus floridanus]
Length = 4304
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V+++N+Q + Y G L L + + L + ++ RKCC HP+L++ +
Sbjct: 1915 ETVVEVELTNIQKKYYRGILERNFSFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNGAE 1974
Query: 148 QSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + D + E Y V +SGK+ L+D +L +LK G RV+I Q++
Sbjct: 1975 DQIQL-DYKTGEKEDSEAYYHALVNSSGKMVLIDKLLPKLKASGHRVLIFSQMV 2027
>gi|397510080|ref|XP_003825431.1| PREDICTED: lymphoid-specific helicase isoform 4 [Pan paniscus]
Length = 740
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 462 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 517
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 518 HKVLLFSQM 526
>gi|42407265|dbj|BAD10849.1| lymphoid specific helicase variant6 [Homo sapiens]
gi|119570418|gb|EAW50033.1| helicase, lymphoid-specific, isoform CRA_h [Homo sapiens]
Length = 740
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 462 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 517
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 518 HKVLLFSQM 526
>gi|426365611|ref|XP_004049862.1| PREDICTED: lymphoid-specific helicase isoform 6 [Gorilla gorilla
gorilla]
Length = 708
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 430 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 485
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 486 HKVLLFSQM 494
>gi|358255110|dbj|GAA56827.1| chromodomain-helicase-DNA-binding protein 7 [Clonorchis sinensis]
Length = 4088
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLC--SPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
V+++N+Q + Y + LC S N P L ++++ RKCC+HP+L+ + +++
Sbjct: 1894 VELTNIQKKYYRAIMERNFAFLCKGSTYSNAPN--LMNVMMELRKCCNHPFLIKGAEEAI 1951
Query: 151 L----VKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L ++ + + V ASGKL L+ +L +L+ G +V+I Q++
Sbjct: 1952 LEEMRTQEAKESTTFHALVYASGKLVLIHKLLPKLRANGHKVLIFSQMI 2000
>gi|338716738|ref|XP_003363509.1| PREDICTED: lymphoid-specific helicase [Equus caballus]
Length = 805
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 527 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKTRG 582
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 583 HKVLLFSQM 591
>gi|42407261|dbj|BAD10847.1| lymphoid specific helicase variant4 [Homo sapiens]
gi|119570421|gb|EAW50036.1| helicase, lymphoid-specific, isoform CRA_k [Homo sapiens]
Length = 708
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 430 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 485
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 486 HKVLLFSQM 494
>gi|119570417|gb|EAW50032.1| helicase, lymphoid-specific, isoform CRA_g [Homo sapiens]
Length = 873
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 615
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 616 HKVLLFSQM 624
>gi|397510082|ref|XP_003825432.1| PREDICTED: lymphoid-specific helicase isoform 5 [Pan paniscus]
Length = 708
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 430 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 485
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 486 HKVLLFSQM 494
>gi|327288760|ref|XP_003229093.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Anolis
carolinensis]
Length = 2059
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 1039 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1095
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1096 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQM 1143
>gi|194205833|ref|XP_001502326.2| PREDICTED: lymphoid-specific helicase isoform 1 [Equus caballus]
Length = 837
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 559 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKTRG 614
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 615 HKVLLFSQM 623
>gi|426365605|ref|XP_004049859.1| PREDICTED: lymphoid-specific helicase isoform 3 [Gorilla gorilla
gorilla]
Length = 884
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 606 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 661
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 662 HKVLLFSQM 670
>gi|50293735|ref|XP_449279.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528592|emb|CAG62253.1| unnamed protein product [Candida glabrata]
Length = 1476
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S+VQ E Y L +L + K +L +I+ + K +HPYL D +
Sbjct: 626 ERILRVELSDVQTEYYKNILTKNYSALTAGAKGGRFSML-NIMNTLMKASNHPYLFDSAE 684
Query: 148 QSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
+ +L K ++ L + +SGK+ LLD +L+ LK G RV+I Q++ I
Sbjct: 685 EKVLEKFGAGNMSRENILRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRI 738
>gi|66800671|ref|XP_629261.1| chromo domain-containing protein [Dictyostelium discoideum AX4]
gi|60462656|gb|EAL60858.1| chromo domain-containing protein [Dictyostelium discoideum AX4]
Length = 3071
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 9/114 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDP-VGVLHDILISARKCCDHPYLVDKS 146
E I V++S+ Q Y L L +K + L +I+I RK C+HP+L+ +
Sbjct: 1126 ETVIQVELSSTQKTYYRAILERNREFLSRGIKQKTNLPKLSNIMIQIRKVCNHPFLIPGA 1185
Query: 147 LQSLLVK-----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+S++ + D EL E L VK+S KL L+D +L LK +G +V+I Q++
Sbjct: 1186 EESIVKQEKIAGDEELGELL---VKSSSKLVLVDKLLQRLKAEGHQVLIFSQMV 1236
>gi|432857891|ref|XP_004068777.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
[Oryzias latipes]
Length = 3255
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S N + L + ++ RKCC+HPYL+ +
Sbjct: 712 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLITGA 770
Query: 147 LQSLL--VKDLELAEYLDVG----VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K A+ D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 771 EEKILESFKKSHSADAQDFPLQAMIQAAGKLVLIDKLLPKLLAGGHKVLIFSQMV 825
>gi|417413069|gb|JAA52881.1| Putative chromatin remodeling complex swi/snf component swi2,
partial [Desmodus rotundus]
Length = 901
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++L RKC DHPYL D + + E+ E+L ++ASGKL LLD +L+ L ++G
Sbjct: 314 LQNVLSQLRKCVDHPYLFD----GVEPEPFEIGEHL---IEASGKLHLLDKLLAYLYSRG 366
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 367 HRVLLFSQM 375
>gi|297687067|ref|XP_002821047.1| PREDICTED: LOW QUALITY PROTEIN: lymphoid-specific helicase [Pongo
abelii]
Length = 890
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 612 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 667
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 668 HKVLLFSQM 676
>gi|426365601|ref|XP_004049857.1| PREDICTED: lymphoid-specific helicase isoform 1 [Gorilla gorilla
gorilla]
Length = 838
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 615
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 616 HKVLLFSQM 624
>gi|332212368|ref|XP_003255292.1| PREDICTED: lymphoid-specific helicase [Nomascus leucogenys]
Length = 837
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 559 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 614
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 615 HKVLLFSQM 623
>gi|301623129|ref|XP_002940874.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Xenopus
(Silurana) tropicalis]
Length = 1954
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 1000 ELIVRVELSPMQKKYYKFILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLFPAA- 1057
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQ 193
SL L Y VKASGKL LL ML +L QG RV+I Q
Sbjct: 1058 -SLESPKLPSGAYEGGSLVKASGKLLLLHKMLRKLNEQGHRVLIFSQ 1103
>gi|156059716|ref|XP_001595781.1| hypothetical protein SS1G_03871 [Sclerotinia sclerotiorum 1980]
gi|154701657|gb|EDO01396.1| hypothetical protein SS1G_03871 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 2189
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCS--------PLKNDPVGVLHDILISARKCCDHPYL 142
IPV +S VQ + Y ++L+K+ L L+ G L++IL+ RKC HP+L
Sbjct: 1092 IPVSMSVVQKQLY-KSILAKNPELIKSIIGKTNKALRPTERGNLNNILMQLRKCLCHPFL 1150
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+++ + L L + AS K QLL+ ML +L+ +G RV+I Q L
Sbjct: 1151 YSSAIEETSLSHEALHRNL---IDASSKFQLLEIMLPKLQARGHRVLIFSQFL 1200
>gi|78190717|gb|ABB29680.1| SWI/SNF-related matrix-associated regulator of chromatin a5
[Leucosolenia sp. AR-2003]
Length = 375
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V +S +Q Y L+ + K D + +L +IL+ RKCC+HPYL D +
Sbjct: 202 IQVGLSKMQRAWYTKILMKDIDVVNGAGKTDKMRLL-NILMQLRKCCNHPYLFDGAEPGP 260
Query: 151 -LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
D + V SGKL LLD +L LK QGSRV+I Q+
Sbjct: 261 PYTTDQHI-------VDNSGKLCLLDKLLVRLKEQGSRVLIFSQM 298
>gi|348504592|ref|XP_003439845.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Oreochromis niloticus]
Length = 991
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +IL++ RKC DHPYL D + + E+ E+L ++ASGKL LLD+ML+ L G
Sbjct: 299 LLNILMNLRKCVDHPYLFD----GVEPEPFEMGEHL---IEASGKLCLLDSMLTFLHKGG 351
Query: 186 SRVIILFQI 194
R+++ Q+
Sbjct: 352 HRILLFSQM 360
>gi|42407269|dbj|BAD10851.1| lymphoid specific helicase variant8 [Homo sapiens]
gi|119570412|gb|EAW50027.1| helicase, lymphoid-specific, isoform CRA_b [Homo sapiens]
Length = 884
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 606 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 661
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 662 HKVLLFSQM 670
>gi|395505398|ref|XP_003757029.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Sarcophilus
harrisii]
Length = 2721
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 697 ETIIEVELTNIQ-KKYYRAILEKNFSFLAKGANQHNMPNLINTMMELRKCCNHPYLINGA 755
Query: 147 LQSLL--VKDLELAEYLDVG----VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + LD ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 756 EEKILEDFRKTHSPDSLDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 810
>gi|350424228|ref|XP_003493728.1| PREDICTED: hypothetical protein LOC100744744 [Bombus impatiens]
Length = 4166
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V+++N+Q + Y G L L + + L + ++ RKCC HP+L++ +
Sbjct: 1865 ETVVEVELTNIQKKYYRGILERNFSFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNGAE 1924
Query: 148 QSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + D + E Y V +SGK+ L+D +L +LK G RV+I Q++
Sbjct: 1925 DQIQL-DYKTGEKEDSEAYYHALVNSSGKMVLIDKLLPKLKASGHRVLIFSQMV 1977
>gi|440895873|gb|ELR47951.1| Lymphoid-specific helicase [Bos grunniens mutus]
Length = 837
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 117 PLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDT 176
P++++ L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD
Sbjct: 550 PIESEVNLKLQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKVDEEL---VTNSGKFLILDR 605
Query: 177 MLSELKNQGSRVIILFQI 194
ML ELK +G +V++ Q+
Sbjct: 606 MLPELKTRGHKVLLFSQM 623
>gi|355782977|gb|EHH64898.1| hypothetical protein EGM_18228 [Macaca fascicularis]
Length = 883
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 605 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 660
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 661 HKVLLFSQM 669
>gi|355562651|gb|EHH19245.1| hypothetical protein EGK_19919 [Macaca mulatta]
Length = 883
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 605 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 660
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 661 HKVLLFSQM 669
>gi|41053461|ref|NP_956607.1| chromodomain-helicase-DNA-binding protein 1-like [Danio rerio]
gi|82209540|sp|Q7ZU90.1|CHD1L_DANRE RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like
gi|29791985|gb|AAH50498.1| Chromodomain helicase DNA binding protein 1-like [Danio rerio]
Length = 1026
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++L+ RKC DHPYL D + + E+ E+L V+ASGKL LLD+ML+ L+ G
Sbjct: 300 LLNVLMQLRKCVDHPYLFD----GVEPEPFEMGEHL---VEASGKLSLLDSMLAYLQEGG 352
Query: 186 SRVIILFQI 194
V++ Q+
Sbjct: 353 HHVLLFSQM 361
>gi|49257012|dbj|BAD24804.1| lymphoid specific helicase variant9 [Homo sapiens]
Length = 809
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 615
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 616 HKVLLFSQM 624
>gi|21914927|ref|NP_060533.2| lymphoid-specific helicase [Homo sapiens]
gi|74761670|sp|Q9NRZ9.1|HELLS_HUMAN RecName: Full=Lymphoid-specific helicase; AltName:
Full=Proliferation-associated SNF2-like protein;
AltName: Full=SWI/SNF2-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 6
gi|8980660|gb|AAF82262.1| proliferation-associated SNF2-like protein [Homo sapiens]
gi|119570420|gb|EAW50035.1| helicase, lymphoid-specific, isoform CRA_j [Homo sapiens]
gi|148922411|gb|AAI46309.1| Helicase, lymphoid-specific [synthetic construct]
gi|189069422|dbj|BAG37088.1| unnamed protein product [Homo sapiens]
gi|261857602|dbj|BAI45323.1| helicase, lymphoid-specific [synthetic construct]
Length = 838
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 615
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 616 HKVLLFSQM 624
>gi|397510074|ref|XP_003825428.1| PREDICTED: lymphoid-specific helicase isoform 1 [Pan paniscus]
Length = 838
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 615
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 616 HKVLLFSQM 624
>gi|443719422|gb|ELU09603.1| hypothetical protein CAPTEDRAFT_166178 [Capitella teleta]
Length = 1711
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V+++ +Q + Y L +L S ++ V +L +I++ +KCC+HPYL +
Sbjct: 747 EFIVRVELNPMQRKYYKYILTRNFEALNSRTGSNQVSLL-NIMMDLKKCCNHPYLFPTAA 805
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
L + G +KA GKL+L+ ML +L N G RV+I Q +L I E
Sbjct: 806 NE--APKLPNGMFEGRGLIKACGKLELMAAMLRKLSNDGHRVLIFSQMTKMLDILEDFLE 863
Query: 204 NEILGY 209
NE Y
Sbjct: 864 NEGYKY 869
>gi|42407259|dbj|BAD10846.1| lymphoid specific helicase variant3 [Homo sapiens]
gi|119570413|gb|EAW50028.1| helicase, lymphoid-specific, isoform CRA_c [Homo sapiens]
Length = 806
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 528 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 583
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 584 HKVLLFSQM 592
>gi|397510076|ref|XP_003825429.1| PREDICTED: lymphoid-specific helicase isoform 2 [Pan paniscus]
Length = 884
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 606 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 661
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 662 HKVLLFSQM 670
>gi|34533780|dbj|BAC86802.1| unnamed protein product [Homo sapiens]
Length = 1225
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 950 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 1006
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1007 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1049
>gi|432853769|ref|XP_004067863.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Oryzias latipes]
Length = 1008
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +IL++ RKC DHPYL D + + E+ E+L ++ASGKL LLD ML+ L G
Sbjct: 299 LLNILMNLRKCVDHPYLFD----GVEPEPFEIGEHL---IEASGKLCLLDNMLAYLHKGG 351
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 352 HRVLLFSQM 360
>gi|426365603|ref|XP_004049858.1| PREDICTED: lymphoid-specific helicase isoform 2 [Gorilla gorilla
gorilla]
Length = 806
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 528 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 583
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 584 HKVLLFSQM 592
>gi|397510078|ref|XP_003825430.1| PREDICTED: lymphoid-specific helicase isoform 3 [Pan paniscus]
Length = 806
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 528 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 583
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 584 HKVLLFSQM 592
>gi|350594938|ref|XP_003484007.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Sus
scrofa]
Length = 804
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ + +
Sbjct: 556 IEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEK 614
Query: 150 LLVKDLELAE-------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L +D L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 615 IL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 666
>gi|328867660|gb|EGG16042.1| myb domain-containing protein [Dictyostelium fasciculatum]
Length = 1999
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V+++ VQ ++Y + K+ S P L +I++ RKCC+HPYL+ +
Sbjct: 698 ETIVEVELTTVQ-KKYYRAIYEKNFSFLRKGGKGPS--LLNIMMELRKCCNHPYLIKGAE 754
Query: 148 QSLLVKDLELAEYLDVG------------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+S + DL++ + +++SGKL L+D +L +L+ G +V+I Q++
Sbjct: 755 KSEMA-DLQIKNGVTAAGKSAQDAVYERLIQSSGKLVLVDKLLPKLRAGGHKVLIFSQMV 813
Query: 196 II 197
++
Sbjct: 814 MV 815
>gi|323455077|gb|EGB10946.1| hypothetical protein AURANDRAFT_62321 [Aureococcus anophagefferens]
Length = 1218
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 14/71 (19%)
Query: 128 DILISARKCCDHPYLV----DKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKN 183
++++ RKCC+HPYL D+SL L E+L V A GKL LLD +L+ LK+
Sbjct: 406 NLVMQLRKCCNHPYLFPNVEDRSLPVL-------GEHL---VGACGKLVLLDKLLTRLKD 455
Query: 184 QGSRVIILFQI 194
+G RV+I Q+
Sbjct: 456 KGHRVLIFSQM 466
>gi|387762935|ref|NP_001248686.1| helicase, lymphoid-specific [Macaca mulatta]
gi|383417901|gb|AFH32164.1| lymphoid-specific helicase [Macaca mulatta]
Length = 837
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 559 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 614
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 615 HKVLLFSQM 623
>gi|449682219|ref|XP_002154909.2| PREDICTED: lymphoid-specific helicase-like [Hydra magnipapillata]
Length = 802
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ L ++L + E + +K SGK+ LLD +L LK+ G
Sbjct: 527 LQNIMMQLRKCCNHPYLLEYPLDP-KTQELVIDENI---IKTSGKMLLLDKILPALKSNG 582
Query: 186 SRVII---LFQILIIRAKVCENEILGYC 210
+V+I + Q++ I C GYC
Sbjct: 583 HKVLIFSQMTQMMDILQDYCYLRGYGYC 610
>gi|159110197|ref|XP_001705360.1| Chromodomain helicase-DNA-binding protein, putative [Giardia lamblia
ATCC 50803]
gi|157433443|gb|EDO77686.1| Chromodomain helicase-DNA-binding protein, putative [Giardia lamblia
ATCC 50803]
Length = 2645
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 21/110 (19%)
Query: 89 YWIPVQISNVQ--LEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV-DK 145
+ P+QIS + LEQ L +KS + L ++L+ RK C+HPY++ D
Sbjct: 1524 HMTPLQISCSEWLLEQNYEMLTAKSYNSVK---------LQNLLMQLRKVCNHPYIIHDL 1574
Query: 146 SLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L + +KD+ V SGK Q+LD +L +L ++G RV+I Q++
Sbjct: 1575 KLHTANLKDI---------VDGSGKFQVLDKLLDKLNSEGHRVLIFSQLI 1615
>gi|126291802|ref|XP_001381614.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Monodelphis
domestica]
Length = 2716
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 693 ETIIEVELTNIQ-KKYYRAILEKNFSFLAKGANQHNMPNLINTMMELRKCCNHPYLINGA 751
Query: 147 LQSLL--VKDLELAEYLDVG----VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + LD ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 752 EEKILEDFRKTHSPDSLDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 806
>gi|119570422|gb|EAW50037.1| helicase, lymphoid-specific, isoform CRA_l [Homo sapiens]
Length = 714
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 436 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 491
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 492 HKVLLFSQM 500
>gi|345325257|ref|XP_001509337.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6
[Ornithorhynchus anatinus]
Length = 2443
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 64/112 (57%), Gaps = 8/112 (7%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ + +
Sbjct: 699 IEVELTNIQ-KKYYRAILEKNFSFLAKGANQHNMPNLINTMMELRKCCNHPYLINGAEEK 757
Query: 150 LL--VKDLELAEYLDVG----VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L + + LD ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 758 ILEDFRKTHSPDALDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|156843751|ref|XP_001644941.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156115595|gb|EDO17083.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 1507
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E + V++S+VQ + Y L +L + K +L +++ +K +HPYL D +
Sbjct: 637 TERILRVELSDVQTDYYKNILTKNYSALTAGTKGGHFSLL-NVMTELKKASNHPYLFDYA 695
Query: 147 LQSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K ++ L + +SGK+ LLD +L+ LK G RV+I Q++
Sbjct: 696 EERVLQKFGDGNMSRENILRGLIMSSGKMVLLDQLLTRLKRDGHRVLIFSQMV 748
>gi|194205835|ref|XP_001502330.2| PREDICTED: lymphoid-specific helicase isoform 2 [Equus caballus]
Length = 808
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 117 PLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDT 176
P++++ L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD
Sbjct: 521 PIESEVNLKLQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDR 576
Query: 177 MLSELKNQGSRVIILFQI 194
ML ELK +G +V++ Q+
Sbjct: 577 MLPELKTRGHKVLLFSQM 594
>gi|119570414|gb|EAW50029.1| helicase, lymphoid-specific, isoform CRA_d [Homo sapiens]
Length = 700
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 422 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 477
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 478 HKVLLFSQM 486
>gi|349605678|gb|AEQ00833.1| Lymphoid-specific helicase-like protein, partial [Equus caballus]
Length = 546
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 117 PLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDT 176
P++++ L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD
Sbjct: 259 PIESEVNLKLQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDR 314
Query: 177 MLSELKNQGSRVIILFQI 194
ML ELK +G +V++ Q+
Sbjct: 315 MLPELKTRGHKVLLFSQM 332
>gi|426365607|ref|XP_004049860.1| PREDICTED: lymphoid-specific helicase isoform 4 [Gorilla gorilla
gorilla]
Length = 822
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 544 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 599
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 600 HKVLLFSQM 608
>gi|31874139|emb|CAD97978.1| hypothetical protein [Homo sapiens]
gi|190689855|gb|ACE86702.1| helicase, lymphoid-specific protein [synthetic construct]
gi|190691223|gb|ACE87386.1| helicase, lymphoid-specific protein [synthetic construct]
Length = 822
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 544 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 599
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 600 HKVLLFSQM 608
>gi|356534230|ref|XP_003535660.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
Length = 1072
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++ + RKCC+HPYL V D ++ + V+ASGK +LLD +L +L+ G
Sbjct: 645 LQNLTMQLRKCCNHPYL--------FVGDYDMYRRKEEIVRASGKFELLDRLLPKLRRAG 696
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 697 HRVLLFSQM 705
>gi|351701586|gb|EHB04505.1| Chromodomain-helicase-DNA-binding protein 3 [Heterocephalus glaber]
Length = 1774
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 996 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1052
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQ 193
++ L Y +K+SGKL LL ML +LK QG RV+I Q
Sbjct: 1053 AAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQ 1099
>gi|383850307|ref|XP_003700737.1| PREDICTED: uncharacterized protein LOC100883463 [Megachile rotundata]
Length = 4199
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V+++N+Q + Y G L L + + L + ++ RKCC HP+L++ +
Sbjct: 1870 ETVVEVELTNIQKKYYRGILERNFSFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNGAE 1929
Query: 148 QSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ + D + E Y V +SGK+ L+D +L +LK G RV+I Q++
Sbjct: 1930 DQIQL-DYKTGEKEDSEAYYHALVNSSGKMVLIDKLLPKLKASGHRVLIFSQMV 1982
>gi|119570416|gb|EAW50031.1| helicase, lymphoid-specific, isoform CRA_f [Homo sapiens]
Length = 822
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 544 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 599
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 600 HKVLLFSQM 608
>gi|449433493|ref|XP_004134532.1| PREDICTED: uncharacterized protein LOC101204186 [Cucumis sativus]
Length = 2368
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV++S++Q E Y +L+K+ + L+N GV +I++ RK C+HPYL
Sbjct: 1037 TERMVPVELSSIQAE-YYRAMLTKNYQI---LRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1092
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + D ++ +KAS KL LL +ML L +G RV++ Q+
Sbjct: 1093 IPGTEPESGSLDF----LHEMRIKASAKLTLLHSMLKILHKEGHRVLLFSQM 1140
>gi|76879794|dbj|BAE45737.1| putative protein product of Nbla10143 [Homo sapiens]
Length = 372
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 94 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 149
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 150 HKVLLFSQM 158
>gi|395731282|ref|XP_002811619.2| PREDICTED: chromodomain-helicase-DNA-binding protein 5, partial
[Pongo abelii]
Length = 1588
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 658 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 714
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 715 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 759
>gi|403420600|ref|NP_001258155.1| chromodomain-helicase-DNA-binding protein 5 [Rattus norvegicus]
Length = 1948
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 946 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 1002
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1003 EAPMLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1047
>gi|397510084|ref|XP_003825433.1| PREDICTED: lymphoid-specific helicase isoform 6 [Pan paniscus]
Length = 822
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 544 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 599
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 600 HKVLLFSQM 608
>gi|168058055|ref|XP_001781026.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162667507|gb|EDQ54135.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 808
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 50 VHRKDDLMVDAIDN-LGSLKE--------KTSKYVAYGGKLDSSRFVEYWIPVQISNVQL 100
H+ D +VD D+ L L+E +T + + L E I ++N+Q
Sbjct: 227 THKDGDKIVDKEDSILTILRETVKVFMLRRTKAALVHSKALVLPPLTEVTIFSPMANIQK 286
Query: 101 EQYCGTLLSKSLSLCSPLKNDPVGV---LHDILISARKCCDHPYLVDKSLQSLLVKDLEL 157
+ Y L +S + D G L +I+I RK C HPYL D + + +
Sbjct: 287 QVYVSVLKKESPKII----GDSPGTATSLQNIVIQLRKACSHPYLFD----GIEPEPFQE 338
Query: 158 AEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
E++ V+ASGKL++LD +L +L G RV+I Q+
Sbjct: 339 GEHI---VEASGKLKMLDVILKKLHASGHRVLIFAQM 372
>gi|49476336|gb|AAT66509.1| KISH2 [Homo sapiens]
Length = 2881
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLS-LCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S L V L + ++ RKCC+HPYL+ +
Sbjct: 1095 ETIIEVELTNIQ-KKYYRAILEKNFSFLFKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1153
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1154 EEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1208
>gi|449490665|ref|XP_004158671.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228553,
partial [Cucumis sativus]
Length = 1851
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLH----DILISARKCCDHPYL 142
E +PV++S++Q E Y +L+K+ + L+N GV +I++ RK C+HPYL
Sbjct: 1037 TERMVPVELSSIQAEYY-RAMLTKNYQI---LRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1092
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ + D ++ +KAS KL LL +ML L +G RV++ Q+
Sbjct: 1093 IPGTEPESGSLDF----LHEMRIKASAKLTLLHSMLKILHKEGHRVLLFSQM 1140
>gi|345800756|ref|XP_546747.3| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Canis lupus
familiaris]
Length = 1986
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 985 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 1041
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1042 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1086
>gi|302791571|ref|XP_002977552.1| hypothetical protein SELMODRAFT_176282 [Selaginella moellendorffii]
gi|300154922|gb|EFJ21556.1| hypothetical protein SELMODRAFT_176282 [Selaginella moellendorffii]
Length = 1032
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L + ++ RKCC+HPYL L KD E + ++ ++ASGK +LLD +L +L+ G
Sbjct: 610 LQNTVMQLRKCCNHPYL-------FLNKDYEPRDRDEI-IRASGKFELLDRLLPKLQKTG 661
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 662 HRVLLFSQM 670
>gi|296815930|ref|XP_002848302.1| chromodomain helicase hrp3 [Arthroderma otae CBS 113480]
gi|238841327|gb|EEQ30989.1| chromodomain helicase hrp3 [Arthroderma otae CBS 113480]
Length = 1524
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 10/112 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV---- 143
E I V++S+VQLE Y +L+K+ + P L +I++ +K +HP++
Sbjct: 703 EKIIRVELSDVQLELY-KNILTKNYDALNHGGKGPKPSLLNIMMELKKASNHPFMFWGAE 761
Query: 144 DKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
D++ S +D L V +SGK+ +LD +L++LKN G RV+I Q++
Sbjct: 762 DQAGGSTRRED-----QLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMV 808
>gi|71681342|gb|AAI00395.1| Helicase, lymphoid specific [Mus musculus]
Length = 821
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 117 PLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDT 176
P++++ L +I++ RKCC+HPY+++ + + ++ ++ E L V SGK +LD
Sbjct: 534 PIESEVNLKLRNIMMLLRKCCNHPYMIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDR 589
Query: 177 MLSELKNQGSRVIILFQI 194
ML ELK +G +V++ Q+
Sbjct: 590 MLPELKKRGHKVLVFSQM 607
>gi|410966154|ref|XP_003989600.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Felis catus]
Length = 2003
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 976 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 1032
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1033 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1075
>gi|395841073|ref|XP_003793373.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Otolemur
garnettii]
Length = 2088
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 1088 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 1144
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1145 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1187
>gi|392334310|ref|XP_002725429.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
[Rattus norvegicus]
Length = 2883
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1094 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1152
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ ++ + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1153 EEKIIGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1207
>gi|327283794|ref|XP_003226625.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2-like [Anolis carolinensis]
Length = 1863
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 746 VEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFL-NIVMELKKCCNHCYLIKSP 804
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ + E+ L +++SGKL LLD +LS L+ +G+RV+I Q++
Sbjct: 805 EENERENNQEMLLSL---IRSSGKLILLDKLLSRLRERGNRVLIFSQMV 850
>gi|302786754|ref|XP_002975148.1| hypothetical protein SELMODRAFT_102849 [Selaginella moellendorffii]
gi|300157307|gb|EFJ23933.1| hypothetical protein SELMODRAFT_102849 [Selaginella moellendorffii]
Length = 1017
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L + ++ RKCC+HPYL L KD E + ++ ++ASGK +LLD +L +L+ G
Sbjct: 610 LQNTVMQLRKCCNHPYL-------FLNKDYEPRDRDEI-IRASGKFELLDRLLPKLQKTG 661
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 662 HRVLLFSQM 670
>gi|444729231|gb|ELW69658.1| Chromodomain-helicase-DNA-binding protein 6 [Tupaia chinensis]
Length = 2557
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 598 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 656
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 657 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 711
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 739 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 797
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 798 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 852
>gi|355563129|gb|EHH19691.1| Chromodomain-helicase-DNA-binding protein 6 [Macaca mulatta]
Length = 2639
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 634 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 692
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 693 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 747
>gi|119596383|gb|EAW75977.1| chromodomain helicase DNA binding protein 6, isoform CRA_d [Homo
sapiens]
Length = 1877
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 19 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 77
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 78 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 132
>gi|115472213|ref|NP_001059705.1| Os07g0497000 [Oryza sativa Japonica Group]
gi|113611241|dbj|BAF21619.1| Os07g0497000, partial [Oryza sativa Japonica Group]
Length = 622
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E +PV+++++Q E Y L L + K L +I++ RK C+HPYL+ +
Sbjct: 212 TERMVPVELTSIQAEYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPGT 271
Query: 147 LQSLLVKDLELAEYL-DVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ E+L ++ +KAS KL LL +ML L G RV+I Q+
Sbjct: 272 -----EPESGSPEFLHEMRIKASAKLTLLHSMLKILHKDGHRVLIFSQM 315
>gi|380817104|gb|AFE80426.1| chromodomain-helicase-DNA-binding protein 6 [Macaca mulatta]
Length = 2716
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|356574396|ref|XP_003555334.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
Length = 1073
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++ + RKCC+HPYL V D ++ + V+ASGK +LLD +L +L+ G
Sbjct: 647 LQNLTMQLRKCCNHPYL--------FVGDYDMYRRKEEIVRASGKFELLDRLLPKLRRAG 698
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 699 HRVLLFSQM 707
>gi|355784481|gb|EHH65332.1| Chromodomain-helicase-DNA-binding protein 6 [Macaca fascicularis]
Length = 2716
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|332209064|ref|XP_003253631.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 6 [Nomascus leucogenys]
Length = 2722
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 704 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 762
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 763 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 817
>gi|301776989|ref|XP_002923917.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
[Ailuropoda melanoleuca]
Length = 1948
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 947 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 1003
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1004 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1048
>gi|301771598|ref|XP_002921219.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like,
partial [Ailuropoda melanoleuca]
Length = 1363
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 341 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 397
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL +L +LK QG RV+I Q+
Sbjct: 398 AAMESPKLPSGAYEGGALIKASGKLMLLQKILRKLKEQGHRVLIFSQM 445
>gi|291404474|ref|XP_002718566.1| PREDICTED: helicase, lymphoid-specific [Oryctolagus cuniculus]
Length = 837
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 65 GSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG 124
G K +T K + Y D +E I V E+ + + PL+++
Sbjct: 505 GRPKRRTRKSINYSNIDDFPNELEKLISQIQPEVDRERTV-------VEVNVPLESEVNL 557
Query: 125 VLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML EL+ +
Sbjct: 558 KLQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELQKR 613
Query: 185 GSRVIILFQI 194
G +V++ Q+
Sbjct: 614 GHKVLLFSQM 623
>gi|281343214|gb|EFB18798.1| hypothetical protein PANDA_010098 [Ailuropoda melanoleuca]
Length = 1318
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 298 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 354
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +KASGKL LL +L +LK QG RV+I Q+
Sbjct: 355 AAMESPKLPSGAYEGGALIKASGKLMLLQKILRKLKEQGHRVLIFSQM 402
>gi|194384680|dbj|BAG59500.1| unnamed protein product [Homo sapiens]
Length = 1014
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ + +
Sbjct: 677 IEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEK 735
Query: 150 LLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 736 IL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 787
>gi|149032671|gb|EDL87541.1| rCG44314 [Rattus norvegicus]
Length = 2698
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1094 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1152
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ ++ + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1153 EEKIIGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1207
>gi|26378644|dbj|BAB28757.2| unnamed protein product [Mus musculus]
Length = 808
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 117 PLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDT 176
P++++ L +I++ RKCC+HPY+++ + + ++ ++ E L V SGK +LD
Sbjct: 521 PIESEVNLKLRNIMMLLRKCCNHPYMIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDR 576
Query: 177 MLSELKNQGSRVIILFQI 194
ML ELK +G +V++ Q+
Sbjct: 577 MLPELKKRGHKVLVFSQM 594
>gi|12232371|ref|NP_032260.2| lymphocyte-specific helicase [Mus musculus]
gi|81910423|sp|Q60848.2|HELLS_MOUSE RecName: Full=Lymphocyte-specific helicase; AltName:
Full=Proliferation-associated SNF2-like protein
gi|12002696|gb|AAG43373.1|AF155210_1 proliferation associated SNF2-like protein [Mus musculus]
gi|12061562|gb|AAB08015.2| lymphocyte specific helicase [Mus musculus]
gi|74151148|dbj|BAE27697.1| unnamed protein product [Mus musculus]
gi|148709866|gb|EDL41812.1| helicase, lymphoid specific [Mus musculus]
Length = 821
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 117 PLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDT 176
P++++ L +I++ RKCC+HPY+++ + + ++ ++ E L V SGK +LD
Sbjct: 534 PIESEVNLKLRNIMMLLRKCCNHPYMIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDR 589
Query: 177 MLSELKNQGSRVIILFQI 194
ML ELK +G +V++ Q+
Sbjct: 590 MLPELKKRGHKVLVFSQM 607
>gi|383422127|gb|AFH34277.1| chromodomain-helicase-DNA-binding protein 6 [Macaca mulatta]
Length = 2716
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|440910953|gb|ELR60688.1| Chromodomain-helicase-DNA-binding protein 6, partial [Bos grunniens
mutus]
Length = 2723
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S N + L + ++ RKCC+HPYL+ +
Sbjct: 698 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLISGA 756
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 757 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 811
>gi|426327635|ref|XP_004024622.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Gorilla
gorilla gorilla]
Length = 2024
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 1018 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 1074
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1075 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1119
>gi|359074223|ref|XP_002694217.2| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Bos taurus]
Length = 2042
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 1036 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 1092
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1093 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1137
>gi|350585547|ref|XP_003481984.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Sus
scrofa]
Length = 1865
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 941 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 997
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 998 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1042
>gi|226289867|gb|EEH45351.1| chromodomain-helicase-DNA-binding protein [Paracoccidioides
brasiliensis Pb18]
Length = 1348
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVL--------HDILISARKCCDHPYL 142
+PV +S VQ + Y L + + K DP L ++IL+ RKC HP++
Sbjct: 917 LPVTMSVVQKKLYKSILAKNPQLIKAIFKRDPGSTLKQTERHNLNNILMQLRKCLCHPFV 976
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
K+++ V L V+AS KLQLL+ ++ +L+ +G RV+I Q L
Sbjct: 977 YSKAIEERTVNAALSHRNL---VEASSKLQLLEMLVPKLQERGHRVLIFSQFL 1026
>gi|119570415|gb|EAW50030.1| helicase, lymphoid-specific, isoform CRA_e [Homo sapiens]
Length = 432
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 154 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 209
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 210 HKVLLFSQM 218
>gi|124487025|ref|NP_001074845.1| chromodomain helicase DNA binding protein 5 isoform 1 [Mus musculus]
Length = 1952
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 950 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 1006
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1007 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1051
>gi|35505451|gb|AAH57567.1| Chromodomain helicase DNA binding protein 1-like [Mus musculus]
gi|38571574|gb|AAH62966.1| Chromodomain helicase DNA binding protein 1-like [Mus musculus]
Length = 900
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +IL RKC DHPYL D + + E+ E+L ++ASGKL LLD +L+ L + G
Sbjct: 305 LQNILTQLRKCVDHPYLFD----GVEPEPFEVGEHL---IEASGKLHLLDRLLAFLYSGG 357
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 358 HRVLLFSQM 366
>gi|149024737|gb|EDL81234.1| rCG30890, isoform CRA_a [Rattus norvegicus]
Length = 1668
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 674 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 730
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 731 EAPMLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 775
>gi|148706991|gb|EDL38938.1| chromodomain helicase DNA binding protein 1-like [Mus musculus]
Length = 900
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +IL RKC DHPYL D + + E+ E+L ++ASGKL LLD +L+ L + G
Sbjct: 305 LQNILTQLRKCVDHPYLFD----GVEPEPFEVGEHL---IEASGKLHLLDRLLAFLYSGG 357
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 358 HRVLLFSQM 366
>gi|74227041|dbj|BAE38319.1| unnamed protein product [Mus musculus]
Length = 883
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +IL RKC DHPYL D + + E+ E+L ++ASGKL LLD +L+ L + G
Sbjct: 305 LQNILTQLRKCVDHPYLFD----GVEPEPFEVGEHL---IEASGKLHLLDRLLAFLYSGG 357
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 358 HRVLLFSQM 366
>gi|402882510|ref|XP_003904783.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Papio
anubis]
Length = 2716
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|392354899|ref|XP_002728634.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Rattus
norvegicus]
Length = 2778
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSP-LKNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S V L + ++ RKCC+HPYL+ +
Sbjct: 1094 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGA 1152
Query: 147 LQSLLVKDLELAE------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ ++ + + +L ++++GKL L+D +L ++K G +V+I Q++
Sbjct: 1153 EEKIIGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMV 1207
>gi|334328751|ref|XP_003341117.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
[Monodelphis domestica]
Length = 1730
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 923 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 979
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 980 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1022
>gi|295661001|ref|XP_002791056.1| chromodomain-helicase-DNA-binding protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226280983|gb|EEH36549.1| chromodomain-helicase-DNA-binding protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1481
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVL--------HDILISARKCCDHPYL 142
+PV +S VQ + Y L + + K DP L ++IL+ RKC HP++
Sbjct: 911 LPVTMSVVQKKLYKSILAKNPQLIKAIFKRDPGSTLKQTERHNLNNILMQLRKCLCHPFV 970
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
K+++ V L V+AS KLQLL+ ++ +L+ +G RV+I Q L
Sbjct: 971 YSKAIEERTVNAALSHRNL---VEASSKLQLLEMLVPKLQERGHRVLIFSQFL 1020
>gi|189458814|ref|NP_083492.2| chromodomain helicase DNA binding protein 5 isoform 2 [Mus musculus]
Length = 1915
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 950 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 1006
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1007 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1051
>gi|13386044|ref|NP_080815.1| chromodomain-helicase-DNA-binding protein 1-like [Mus musculus]
gi|81916841|sp|Q9CXF7.1|CHD1L_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like
gi|12852350|dbj|BAB29376.1| unnamed protein product [Mus musculus]
gi|30931375|gb|AAH52385.1| Chromodomain helicase DNA binding protein 1-like [Mus musculus]
Length = 900
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +IL RKC DHPYL D + + E+ E+L ++ASGKL LLD +L+ L + G
Sbjct: 305 LQNILTQLRKCVDHPYLFD----GVEPEPFEVGEHL---IEASGKLHLLDRLLAFLYSGG 357
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 358 HRVLLFSQM 366
>gi|440908595|gb|ELR58598.1| Chromodomain-helicase-DNA-binding protein 5, partial [Bos grunniens
mutus]
Length = 1920
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 923 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 979
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 980 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1024
>gi|24308089|ref|NP_056372.1| chromodomain-helicase-DNA-binding protein 5 [Homo sapiens]
gi|51701343|sp|Q8TDI0.1|CHD5_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 5;
Short=CHD-5; AltName: Full=ATP-dependent helicase CHD5
gi|19773960|gb|AAL98962.1|AF425231_1 chromodomain helicase DNA binding protein 5 [Homo sapiens]
gi|119591922|gb|EAW71516.1| chromodomain helicase DNA binding protein 5 [Homo sapiens]
gi|148922387|gb|AAI46382.1| Chromodomain helicase DNA binding protein 5 [synthetic construct]
gi|151555557|gb|AAI48804.1| Chromodomain helicase DNA binding protein 5 [synthetic construct]
gi|261857536|dbj|BAI45290.1| Chromodomain-helicase-DNA-binding protein 5 [synthetic construct]
Length = 1954
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 948 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 1004
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1005 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1049
>gi|403290683|ref|XP_003936439.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Saimiri
boliviensis boliviensis]
Length = 2716
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|348563827|ref|XP_003467708.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like isoform
1 [Cavia porcellus]
Length = 2716
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|338722190|ref|XP_001492263.3| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Equus
caballus]
Length = 1930
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 924 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 980
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 981 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1025
>gi|301766196|ref|XP_002918518.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like,
partial [Ailuropoda melanoleuca]
Length = 2710
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 689 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 747
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 748 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 802
>gi|119596380|gb|EAW75974.1| chromodomain helicase DNA binding protein 6, isoform CRA_a [Homo
sapiens]
Length = 952
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 731 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 789
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 790 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 844
>gi|410049633|ref|XP_001170676.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 4
[Pan troglodytes]
Length = 1318
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 203 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 261
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 262 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 309
>gi|390462609|ref|XP_002806815.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 6 [Callithrix jacchus]
Length = 2714
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|300120100|emb|CBK19654.2| unnamed protein product [Blastocystis hominis]
Length = 1570
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
I V+++ +Q + Y + + + KN P L +I++ RKCC+HPYL+ + S+
Sbjct: 305 INVEMTAMQKKFYRAVYDRNTSVIGNESKNLPS--LINIMMEIRKCCNHPYLIRGAESSI 362
Query: 151 LVK------DLELAE-YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+++ D + E L + +SGK+ LLD +L +L++QG RV++ Q+
Sbjct: 363 MLEIRTPASDWKGEELVLQALLTSSGKMVLLDKLLPKLQSQGHRVLLFSQM 413
>gi|281352812|gb|EFB28396.1| hypothetical protein PANDA_006982 [Ailuropoda melanoleuca]
Length = 2707
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 686 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 744
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 745 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 799
>gi|148682990|gb|EDL14937.1| mCG131426 [Mus musculus]
Length = 1955
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 959 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 1015
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1016 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1060
>gi|403297789|ref|XP_003939734.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Saimiri
boliviensis boliviensis]
Length = 2203
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 1200 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 1256
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1257 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1299
>gi|392332091|ref|XP_001079343.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Rattus
norvegicus]
Length = 2080
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 1058 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1114
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1115 AAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQM 1162
>gi|348563829|ref|XP_003467709.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like isoform
2 [Cavia porcellus]
Length = 2709
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|315053040|ref|XP_003175894.1| chromodomain helicase hrp3 [Arthroderma gypseum CBS 118893]
gi|311341209|gb|EFR00412.1| chromodomain helicase hrp3 [Arthroderma gypseum CBS 118893]
Length = 1559
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 10/112 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV---- 143
E I V++S+VQLE Y +L+K+ + P L +I++ +K +HP++
Sbjct: 731 EKIIRVELSDVQLELY-KNILTKNYDALNHGGKGPKPSLLNIMMELKKASNHPFMFWGPE 789
Query: 144 DKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
D++ S +D L V +SGK+ +LD +L++LKN G RV+I Q++
Sbjct: 790 DQAGGSTRRED-----QLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMV 836
>gi|297259808|ref|XP_002808003.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 6-like [Macaca mulatta]
Length = 2668
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 674 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 732
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 733 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 787
>gi|148678548|gb|EDL10495.1| mCG140617 [Mus musculus]
Length = 1826
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 803 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 859
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 860 AAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQM 907
>gi|62530244|gb|AAX85379.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
norvegicus]
gi|62530246|gb|AAX85380.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
norvegicus]
gi|62530248|gb|AAX85381.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
norvegicus]
gi|62530250|gb|AAX85382.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
norvegicus]
Length = 1959
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 937 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 993
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 994 AAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQM 1041
>gi|358365373|dbj|GAA81995.1| chromatin remodeling complex subunit [Aspergillus kawachii IFO
4308]
Length = 1494
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 14/115 (12%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSL----------CSPLKNDPVGVLHDILISARKCCDHP 140
+PV ++ VQ + Y ++L+K+ L LK L++IL+ RKC HP
Sbjct: 877 VPVSMTTVQKKLY-KSILAKNPQLIKAIFQRKEGTRALKQTEKHNLNNILMQLRKCLCHP 935
Query: 141 YLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ ++++ +L V A+ K QLL+ ML +LKN+G RV+I Q L
Sbjct: 936 FVYSRAIEEKTSNAAISHRHL---VDAAAKFQLLELMLPKLKNRGHRVLIFSQFL 987
>gi|291409634|ref|XP_002721122.1| PREDICTED: chromodomain helicase DNA binding protein 6 [Oryctolagus
cuniculus]
Length = 2717
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 694 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 752
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 753 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 807
>gi|149053041|gb|EDM04858.1| chromodomain helicase DNA binding protein 3 [Rattus norvegicus]
Length = 1827
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 804 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 860
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 861 AAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQM 908
>gi|119596384|gb|EAW75978.1| chromodomain helicase DNA binding protein 6, isoform CRA_e [Homo
sapiens]
Length = 2731
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 731 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 789
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 790 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 844
>gi|62530236|gb|AAX85375.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
norvegicus]
gi|62530238|gb|AAX85376.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
norvegicus]
Length = 1925
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 937 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 993
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 994 AAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQM 1041
>gi|62530240|gb|AAX85377.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
norvegicus]
Length = 1924
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 936 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 992
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 993 AAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQM 1040
>gi|62530242|gb|AAX85378.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
norvegicus]
Length = 1927
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 939 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 995
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 996 AAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQM 1043
>gi|20521890|dbj|BAA92573.2| KIAA1335 protein [Homo sapiens]
Length = 2041
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 22 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 80
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 81 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 135
>gi|332265298|ref|XP_003281663.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Nomascus
leucogenys]
Length = 2435
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 1421 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 1477
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1478 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1520
>gi|281346162|gb|EFB21746.1| hypothetical protein PANDA_013140 [Ailuropoda melanoleuca]
Length = 1814
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 817 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 873
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 874 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 916
>gi|397503175|ref|XP_003822207.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Pan paniscus]
Length = 1957
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 951 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 1007
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1008 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1052
>gi|395752329|ref|XP_002830358.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Pongo
abelii]
Length = 2424
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ + +
Sbjct: 699 IEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEK 757
Query: 150 LLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 758 IL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|354501163|ref|XP_003512662.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
[Cricetulus griseus]
Length = 1977
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 936 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 992
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 993 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1035
>gi|351704214|gb|EHB07133.1| Chromodomain-helicase-DNA-binding protein 6 [Heterocephalus glaber]
Length = 2756
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 752 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 810
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 811 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 865
>gi|344282967|ref|XP_003413244.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Loxodonta
africana]
Length = 2101
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 974 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 1030
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1031 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1073
>gi|332858468|ref|XP_001148310.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6 isoform 6
[Pan troglodytes]
gi|410208168|gb|JAA01303.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
gi|410252212|gb|JAA14073.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
gi|410297958|gb|JAA27579.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
gi|410350331|gb|JAA41769.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
Length = 2715
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|332834683|ref|XP_001150939.2| PREDICTED: lymphoid-specific helicase isoform 5 [Pan troglodytes]
Length = 708
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L + SGK +LD ML ELK +G
Sbjct: 430 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---ITNSGKFLILDRMLPELKKRG 485
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 486 HKVLLFSQM 494
>gi|145512399|ref|XP_001442116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409388|emb|CAK74719.1| unnamed protein product [Paramecium tetraurelia]
Length = 1659
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELA-EYLDVGVKASGKLQLLDTMLSELKNQ 184
L+++ I RKCC+HP+L+ + +Q+ L K + +Y++ V++SGK+ LLD +L++ +++
Sbjct: 831 LNNLEIQLRKCCNHPFLI-QEMQNDLSKGCQTKIDYINKLVESSGKMILLDKLLNKFRSE 889
Query: 185 GSRVIILFQILII 197
G +++I Q ++
Sbjct: 890 GKKMLIFSQFTMM 902
>gi|29244924|ref|NP_115597.3| chromodomain-helicase-DNA-binding protein 6 [Homo sapiens]
gi|296439466|sp|Q8TD26.4|CHD6_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 6;
Short=CHD-6; AltName: Full=ATP-dependent helicase CHD6;
AltName: Full=Radiation-induced gene B protein
gi|119596381|gb|EAW75975.1| chromodomain helicase DNA binding protein 6, isoform CRA_b [Homo
sapiens]
gi|225000154|gb|AAI72397.1| Chromodomain helicase DNA binding protein 6 [synthetic construct]
Length = 2715
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|5911978|emb|CAB55959.1| hypothetical protein [Homo sapiens]
Length = 1388
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL
Sbjct: 378 TELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--P 434
Query: 147 LQSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ ++ L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 435 VAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 483
>gi|426391703|ref|XP_004062207.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Gorilla
gorilla gorilla]
Length = 2715
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|410953850|ref|XP_003983583.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Felis
catus]
Length = 2775
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 754 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 812
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 813 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 867
>gi|402852746|ref|XP_003891074.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 isoform 1
[Papio anubis]
Length = 1954
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 950 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 1006
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1007 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1049
>gi|392351358|ref|XP_220602.6| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Rattus
norvegicus]
Length = 2069
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 1047 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1103
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1104 AAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQM 1151
>gi|351713762|gb|EHB16681.1| Chromodomain-helicase-DNA-binding protein 5 [Heterocephalus glaber]
Length = 2263
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 1174 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 1230
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1231 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1273
>gi|347842029|emb|CCD56601.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1619
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCS--------PLKNDPVGVLHDILISARKCCDHPYL 142
IPV +S++Q + Y ++L+K+ L L+ G L++IL+ RKC HP+L
Sbjct: 1015 IPVSMSSLQKQLY-KSILAKNPELIKSIIGKSDRALRPTERGNLNNILMQLRKCLCHPFL 1073
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+++ + L L + AS K QLL+ ML +L+ +G RV+I Q L
Sbjct: 1074 YSSAIEETSLTHDALHRNL---IDASSKFQLLEIMLPKLQARGHRVLIFSQFL 1123
>gi|332834681|ref|XP_001151071.2| PREDICTED: lymphoid-specific helicase isoform 7 [Pan troglodytes]
Length = 740
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L + SGK +LD ML ELK +G
Sbjct: 462 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---ITNSGKFLILDRMLPELKKRG 517
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 518 HKVLLFSQM 526
>gi|397511162|ref|XP_003825948.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Pan
paniscus]
Length = 2715
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|395828998|ref|XP_003787648.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Otolemur
garnettii]
Length = 2711
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 694 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 752
Query: 147 LQSLLVKDLELAE-------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D + L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 753 EEKIL-EDFRKSHSPDALDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 807
>gi|395526186|ref|XP_003765249.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Sarcophilus
harrisii]
Length = 2043
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 952 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 1008
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1009 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1051
>gi|390464184|ref|XP_002806940.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2 [Callithrix jacchus]
Length = 2054
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 771
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 772 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
>gi|380787663|gb|AFE65707.1| chromodomain-helicase-DNA-binding protein 5 [Macaca mulatta]
Length = 1954
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 950 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 1006
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1007 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1049
>gi|351714273|gb|EHB17192.1| Chromodomain-helicase-DNA-binding protein 2 [Heterocephalus glaber]
Length = 1714
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 698 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 756
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 757 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 804
>gi|343168810|ref|NP_001230229.1| chromodomain helicase DNA binding protein 6 [Bos taurus]
Length = 2721
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S N + L + ++ RKCC+HPYL+ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLISGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|340377289|ref|XP_003387162.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like
[Amphimedon queenslandica]
Length = 1906
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 67/115 (58%), Gaps = 13/115 (11%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I ++++ +Q +QY +L ++ + + N V L + ++ RKCC+HP+L+
Sbjct: 1236 ETIIEIELTAIQ-KQYYRAILERNFTFLTKGSNT-VPNLLNTMMELRKCCNHPFLI-AGA 1292
Query: 148 QSLLVKDLE-------LAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +V+D + ++E L ++ASGKL L+D +L +L+ +G +V+I Q++
Sbjct: 1293 ELKIVEDFQVHFPNRHISESL---IQASGKLVLVDKLLPKLREKGHKVLIFSQMV 1344
>gi|301122081|ref|XP_002908767.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora
infestans T30-4]
gi|262099529|gb|EEY57581.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora
infestans T30-4]
Length = 1788
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 126 LHDILISARKCCDHPYL---VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELK 182
L ++++ RKCC+HPYL V++ L L D + E L VK GK+ L+D +L L
Sbjct: 719 LMNVMMELRKCCNHPYLNNGVEEILNEGLTTDTQRHEML---VKCCGKMVLIDKLLPRLN 775
Query: 183 NQGSRVIILFQILIIRAKVCENEILGYC 210
+ G +V+I Q ++R + L YC
Sbjct: 776 DGGHKVLIFSQ--MVRVLDIIEDYLRYC 801
>gi|225682466|gb|EEH20750.1| chromodomain-helicase-DNA-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 1605
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVL--------HDILISARKCCDHPYL 142
+PV +S VQ + Y L + + K DP L ++IL+ RKC HP++
Sbjct: 917 LPVTMSVVQKKLYKSILAKNPQLIKAIFKRDPGSTLKQTERHNLNNILMQLRKCLCHPFV 976
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
K+++ V L V+AS KLQLL+ ++ +L+ +G RV+I Q L
Sbjct: 977 YSKAIEERTVNAALSHRNL---VEASSKLQLLEMLVPKLQERGHRVLIFSQFL 1026
>gi|19421557|gb|AAK56405.1| chromodomain helicase DNA binding protein 5 [Homo sapiens]
Length = 2713
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 694 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 752
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 753 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 807
>gi|47196895|emb|CAF88972.1| unnamed protein product [Tetraodon nigroviridis]
gi|47197677|emb|CAF87854.1| unnamed protein product [Tetraodon nigroviridis]
Length = 89
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
Query: 122 PVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELA---EYLDVGVKASGKLQLLDTML 178
P G L +I++ +KCCDH +LV + +D E E L V+ SGKL LLD +L
Sbjct: 2 PSGFL-NIVMELKKCCDHSFLVKQP------EDGETETHEEQLQAAVRGSGKLVLLDKLL 54
Query: 179 SELKNQGSRVIILFQIL 195
+ L+ +G+RV+I Q++
Sbjct: 55 TRLRERGNRVLIFSQMV 71
>gi|345790058|ref|XP_534421.3| PREDICTED: chromodomain-helicase-DNA-binding protein 6 isoform 1
[Canis lupus familiaris]
Length = 2715
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 696 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 754
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 755 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 809
>gi|297802844|ref|XP_002869306.1| hypothetical protein ARALYDRAFT_328538 [Arabidopsis lyrata subsp.
lyrata]
gi|297315142|gb|EFH45565.1| hypothetical protein ARALYDRAFT_328538 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
+ ++L+ RK C HPYL+ K ++ L E L ++ASGKLQLLD M+ +LK QG
Sbjct: 487 ISNVLMDLRKVCSHPYLL-KDVEPRLEDANEAFTKL---LEASGKLQLLDKMMVKLKEQG 542
Query: 186 SRVIILFQ 193
RV+I Q
Sbjct: 543 HRVLIYSQ 550
>gi|357527416|ref|NP_666131.3| chromodomain helicase DNA binding protein 3 [Mus musculus]
Length = 2055
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 1033 ELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLL-NIMMDLKKCCNHPYLF--PV 1089
Query: 148 QSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
++ L Y +K+SGKL LL ML +LK QG RV+I Q+
Sbjct: 1090 AAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQM 1137
>gi|444730344|gb|ELW70731.1| Chromodomain-helicase-DNA-binding protein 2 [Tupaia chinensis]
Length = 1104
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 703 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 761
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++
Sbjct: 762 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMV 807
>gi|358416078|ref|XP_609360.5| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Bos taurus]
Length = 1991
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 985 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAV 1041
Query: 151 LVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1042 EAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1086
>gi|9956001|gb|AAG01987.1| similar to Mus musculus lymphocyte specific helicase mRNA with
GenBank Accession Number U25691.1 [Homo sapiens]
gi|21410637|gb|AAH31004.1| HELLS protein [Homo sapiens]
gi|21411296|gb|AAH30963.1| HELLS protein [Homo sapiens]
Length = 348
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 70 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 125
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 126 HKVLLFSQM 134
>gi|345792589|ref|XP_859353.2| PREDICTED: lymphoid-specific helicase isoform 6 [Canis lupus
familiaris]
Length = 837
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 559 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKARG 614
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 615 HKVLLFSQM 623
>gi|241948531|ref|XP_002416988.1| ATP-dependent chromodomain helicase, putative; chromodomain protein
1, putative [Candida dubliniensis CD36]
gi|223640326|emb|CAX44576.1| ATP-dependent chromodomain helicase, putative [Candida dubliniensis
CD36]
Length = 1406
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S++Q E Y + +L + + + +L +I+ +K +HPYL D + + +L
Sbjct: 593 VELSDIQTEYYKNIITKNYAALNAGNRGSQISLL-NIMSELKKASNHPYLFDGAEEKVLD 651
Query: 153 KD--LELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
K+ L V +SGK+ LL+ +LS LK +G RV+I Q++
Sbjct: 652 KEGSHSRENTLKGIVMSSGKMVLLEQLLSRLKKEGHRVLIFSQMV 696
>gi|119192338|ref|XP_001246775.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 1075
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL + + E+L V +GK+ +LD +L LKNQG
Sbjct: 413 LLNIVMQLRKCCNHPYLFEGAEPG---PPYTTDEHL---VDNAGKMVILDKLLKRLKNQG 466
Query: 186 SRVIILFQ---ILIIRAKVCENEILGYC 210
SRV+I Q +L I C YC
Sbjct: 467 SRVLIFSQMSRVLDILEDYCVFREHAYC 494
>gi|390465301|ref|XP_003733383.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 5 [Callithrix jacchus]
Length = 1887
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 934 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 990
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 991 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1033
>gi|402852748|ref|XP_003891075.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 isoform 2
[Papio anubis]
Length = 1951
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 950 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 1006
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1007 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1049
>gi|119596382|gb|EAW75976.1| chromodomain helicase DNA binding protein 6, isoform CRA_c [Homo
sapiens]
Length = 2750
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 731 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 789
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 790 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 844
>gi|452989426|gb|EME89181.1| hypothetical protein MYCFIDRAFT_114041, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1451
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++++VQLE Y L +L + K +L +I++ +K +HP++ +
Sbjct: 609 EKIIRVELADVQLEYYKNILTRNYAALNAGNKAQKTSLL-NIMMELKKASNHPFMFPNAE 667
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + L + +SGK+ L+D +L +++ G RV+I Q++
Sbjct: 668 ERILAGSEAREDQLKALITSSGKMMLIDQLLMKMRKDGHRVLIFSQMV 715
>gi|444728247|gb|ELW68711.1| Chromodomain-helicase-DNA-binding protein 5 [Tupaia chinensis]
Length = 2128
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL
Sbjct: 892 TELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--P 948
Query: 147 LQSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ ++ L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 949 VAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 997
>gi|426242043|ref|XP_004014888.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 6 [Ovis aries]
Length = 2691
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 694 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 752
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 753 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 807
>gi|355678692|gb|AER96187.1| chromodomain helicase DNA binding protein 6 [Mustela putorius furo]
Length = 169
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 56 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 114
Query: 147 LQSLLVKDLELAE-------YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D L ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 115 EEKIL-EDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 169
>gi|296479122|tpg|DAA21237.1| TPA: chromodomain helicase DNA binding protein 5 [Bos taurus]
Length = 2099
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 1038 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 1094
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1095 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1137
>gi|348579584|ref|XP_003475559.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Cavia
porcellus]
Length = 1674
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 694 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 752
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++
Sbjct: 753 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMV 798
>gi|332834677|ref|XP_001151210.2| PREDICTED: lymphoid-specific helicase isoform 9 [Pan troglodytes]
Length = 884
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L + SGK +LD ML ELK +G
Sbjct: 606 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---ITNSGKFLILDRMLPELKKRG 661
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 662 HKVLLFSQM 670
>gi|330796151|ref|XP_003286132.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum]
gi|325083877|gb|EGC37318.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum]
Length = 2186
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL+ S + E E ++ASGKL L+D +L +LK G
Sbjct: 765 LLNIMMELRKCCNHPYLIKGVEHSETNEISEKDEVYTKLIQASGKLVLVDKLLPKLKAGG 824
Query: 186 SRVIILFQILII 197
+V+I Q++ +
Sbjct: 825 HKVLIFSQMVSV 836
>gi|20809475|gb|AAH29381.1| HELLS protein [Homo sapiens]
Length = 348
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 70 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 125
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 126 HKVLLFSQM 134
>gi|392863984|gb|EAS35226.2| chromatin remodelling complex ATPase chain ISW1 [Coccidioides
immitis RS]
Length = 1123
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL + + E+L V +GK+ +LD +L LKNQG
Sbjct: 461 LLNIVMQLRKCCNHPYLFEGAEPG---PPYTTDEHL---VDNAGKMVILDKLLKRLKNQG 514
Query: 186 SRVIILFQ---ILIIRAKVCENEILGYC 210
SRV+I Q +L I C YC
Sbjct: 515 SRVLIFSQMSRVLDILEDYCVFREHAYC 542
>gi|348571006|ref|XP_003471287.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Cavia
porcellus]
Length = 2442
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + ++
Sbjct: 1341 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--PVAAVEA 1397
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 1398 PVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1440
>gi|320031640|gb|EFW13600.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira]
Length = 1123
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL + + E+L V +GK+ +LD +L LKNQG
Sbjct: 461 LLNIVMQLRKCCNHPYLFEGAEPG---PPYTTDEHL---VDNAGKMVILDKLLKRLKNQG 514
Query: 186 SRVIILFQ---ILIIRAKVCENEILGYC 210
SRV+I Q +L I C YC
Sbjct: 515 SRVLIFSQMSRVLDILEDYCVFREHAYC 542
>gi|303312905|ref|XP_003066464.1| Chromatin remodeling complex ATPase chain Iswi, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240106126|gb|EER24319.1| Chromatin remodeling complex ATPase chain Iswi, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 1123
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL + + E+L V +GK+ +LD +L LKNQG
Sbjct: 461 LLNIVMQLRKCCNHPYLFEGAEPG---PPYTTDEHL---VDNAGKMVILDKLLKRLKNQG 514
Query: 186 SRVIILFQ---ILIIRAKVCENEILGYC 210
SRV+I Q +L I C YC
Sbjct: 515 SRVLIFSQMSRVLDILEDYCVFREHAYC 542
>gi|410222506|gb|JAA08472.1| helicase, lymphoid-specific [Pan troglodytes]
gi|410251364|gb|JAA13649.1| helicase, lymphoid-specific [Pan troglodytes]
Length = 838
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L + SGK +LD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---ITNSGKFLILDRMLPELKKRG 615
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 616 HKVLLFSQM 624
>gi|392338966|ref|XP_003753690.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform
1 [Rattus norvegicus]
gi|392345927|ref|XP_003749406.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform
1 [Rattus norvegicus]
Length = 801
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++L RKC DHPYL D + + E+ E+L ++ASGKL LLD +L+ L + G
Sbjct: 211 LQNVLTQLRKCVDHPYLFD----GVEPEPFEVGEHL---IEASGKLHLLDRLLAFLYSGG 263
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 264 HRVLLFSQM 272
>gi|348520451|ref|XP_003447741.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
[Oreochromis niloticus]
Length = 3518
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S S N + L + ++ RKCC+HPYL+ +
Sbjct: 810 ETIIEVELTNIQ-KKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLITGA 868
Query: 147 LQSLL-----VKDLELAEY-LDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L E ++ L ++A+GKL L+D +L +L G +V++ Q++
Sbjct: 869 EEKILESFKKSHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMV 923
>gi|332834673|ref|XP_001151268.2| PREDICTED: lymphoid-specific helicase isoform 10 [Pan troglodytes]
gi|410299342|gb|JAA28271.1| helicase, lymphoid-specific [Pan troglodytes]
gi|410335271|gb|JAA36582.1| helicase, lymphoid-specific [Pan troglodytes]
Length = 838
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L + SGK +LD ML ELK +G
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---ITNSGKFLILDRMLPELKKRG 615
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 616 HKVLLFSQM 624
>gi|441617357|ref|XP_004088435.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Nomascus leucogenys]
Length = 743
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 203 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 261
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++
Sbjct: 262 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMV 307
>gi|432920325|ref|XP_004079948.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Oryzias
latipes]
Length = 1963
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGV-KASGKLQLLDTMLSELKNQ 184
L +I++ +KCC+HPYL + S+ + Y + KASGKL LL ML +LK Q
Sbjct: 1034 LLNIMMDLKKCCNHPYLF--PVASMEAQKTPSGAYEGSALTKASGKLMLLQKMLRKLKEQ 1091
Query: 185 GSRVIILFQI 194
G RV++ Q+
Sbjct: 1092 GHRVLVFSQM 1101
>gi|432102738|gb|ELK30217.1| Chromodomain-helicase-DNA-binding protein 6 [Myotis davidii]
Length = 2697
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ +
Sbjct: 674 ETIIEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGA 732
Query: 147 LQSLLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L +D D ++A+GKL L+D +L +L G +V+I Q++
Sbjct: 733 EEKIL-EDFRKTHSSDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 787
>gi|26333481|dbj|BAC30458.1| unnamed protein product [Mus musculus]
Length = 278
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +IL+ RKCC+HPYL D + D+ L V SGK+ +LD +L +LK Q
Sbjct: 6 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHL-------VTNSGKMVVLDKLLPKLKEQ 58
Query: 185 GSRVIILFQI 194
GSRV+I Q+
Sbjct: 59 GSRVLIFSQM 68
>gi|344284165|ref|XP_003413840.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Loxodonta
africana]
Length = 1902
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 805 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 863
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 864 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 911
>gi|344253124|gb|EGW09228.1| Chromodomain-helicase-DNA-binding protein 1-like [Cricetulus
griseus]
Length = 810
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++L RKC DHPYL D + + E+ E+L ++ASGKL LLD +L+ L + G
Sbjct: 239 LQNVLTQLRKCVDHPYLFD----GVEPEPFEIGEHL---IEASGKLHLLDRLLAFLYSGG 291
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 292 HRVLLFSQM 300
>gi|170034569|ref|XP_001845146.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus]
gi|167875927|gb|EDS39310.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus]
Length = 5423
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV---- 143
E + V+++N+Q + Y G L L + + L + ++ RKCC HPYL+
Sbjct: 2393 ETIVEVELTNIQKKYYRGILEQNFSFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNGAE 2452
Query: 144 DKSLQSLLVKDLELAE-YLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
D+ ++ E AE Y V +SGK+ L+D +L +LK G RV+I Q++
Sbjct: 2453 DQIQYDYRMQHGEDAEAYYKNLVVSSGKMVLIDKLLPKLKANGHRVLIFSQMV 2505
>gi|332834675|ref|XP_001151143.2| PREDICTED: lymphoid-specific helicase isoform 8 [Pan troglodytes]
Length = 806
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L + SGK +LD ML ELK +G
Sbjct: 528 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---ITNSGKFLILDRMLPELKKRG 583
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 584 HKVLLFSQM 592
>gi|83286456|ref|XP_730169.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Plasmodium
yoelii yoelii 17XNL]
gi|23489816|gb|EAA21734.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Plasmodium
yoelii yoelii]
Length = 2541
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q+E Y +L+K+ + L +I + +K C+HP+L +
Sbjct: 1162 VERILRVELSPIQIEYY-KNILTKNYEQLAKASGGAKNSLQNICMELKKVCNHPFLCCEP 1220
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ KD EY + V +SGK+ LL+ +L LK +G+RV+I Q++
Sbjct: 1221 ID----KD----EYRERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMV 1261
>gi|356541302|ref|XP_003539117.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
Length = 1063
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++ + RKCC+HPYL V D ++ ++ + +ASGK +LLD +L +L+ G
Sbjct: 646 LQNLTMQLRKCCNHPYL--------FVGDYDIHKHKEEIFRASGKFELLDRLLPKLRRAG 697
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 698 HRVLLFSQM 706
>gi|366987099|ref|XP_003673316.1| hypothetical protein NCAS_0A03690 [Naumovozyma castellii CBS 4309]
gi|342299179|emb|CCC66927.1| hypothetical protein NCAS_0A03690 [Naumovozyma castellii CBS 4309]
Length = 1457
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S+VQ E Y L +L + K +L +I+ +K +HPYL D +
Sbjct: 617 ERILRVELSDVQTEYYKNILTKNYSALTAGSKGGHFSLL-NIMSELKKASNHPYLFDNAE 675
Query: 148 QSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K + L + +SGK+ LLD +L++LK G RV+I Q++
Sbjct: 676 ERVLKKFGDGQMSRENVLRGLIMSSGKMVLLDQLLNKLKKDGHRVLIFSQMV 727
>gi|426240369|ref|XP_004014081.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Ovis aries]
Length = 2056
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
E + V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL
Sbjct: 928 TELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLF--P 984
Query: 147 LQSLLVKDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ ++ L Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 985 VAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 1033
>gi|119622565|gb|EAX02160.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|119622567|gb|EAX02162.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|119622569|gb|EAX02164.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|239740390|gb|ACS13730.1| chromodomain-helicase-dna-binding protein 2 [Homo sapiens]
Length = 1739
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 771
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 772 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
>gi|378732299|gb|EHY58758.1| adenosinetriphosphatase [Exophiala dermatitidis NIH/UT8656]
Length = 1543
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 62 DNLGSLKEKTSKYVAYGGKLDSSRFV----EYWIPVQISNVQLEQYCGTLLSKSLSLCSP 117
DN+ L + KY K F+ + IPV +S VQ + Y ++L+++ L
Sbjct: 957 DNVPELHQTLRKYFLRRTKAQVLTFLPPMAQVIIPVSMSTVQKKVY-KSILARNPQLMKS 1015
Query: 118 LKNDPVGV-------LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGK 170
L V L++IL+ RK HP++ + ++ V + L V+ASGK
Sbjct: 1016 LFTQDKSVPAKERMNLNNILMQLRKTLCHPFVYSRDIEERGVDPTTAFQNL---VQASGK 1072
Query: 171 LQLLDTMLSELKNQGSRVIILFQIL 195
LQLL ML +L+ +G RV++ Q L
Sbjct: 1073 LQLLSIMLPKLQERGHRVLMFSQFL 1097
>gi|426380381|ref|XP_004056847.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Gorilla
gorilla gorilla]
Length = 1624
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 507 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 565
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++
Sbjct: 566 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMV 611
>gi|354486534|ref|XP_003505435.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like [Cricetulus griseus]
Length = 873
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++L RKC DHPYL D + + E+ E+L ++ASGKL LLD +L+ L + G
Sbjct: 283 LQNVLTQLRKCVDHPYLFD----GVEPEPFEIGEHL---IEASGKLHLLDRLLAFLYSGG 335
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 336 HRVLLFSQM 344
>gi|2645431|gb|AAB87382.1| CHD2 [Homo sapiens]
Length = 1739
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 771
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 772 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
>gi|332834679|ref|XP_001150864.2| PREDICTED: lymphoid-specific helicase isoform 4 [Pan troglodytes]
Length = 822
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L + SGK +LD ML ELK +G
Sbjct: 544 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---ITNSGKFLILDRMLPELKKRG 599
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 600 HKVLLFSQM 608
>gi|32425420|gb|AAH15477.1| HELLS protein, partial [Homo sapiens]
Length = 317
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 39 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKRG 94
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 95 HKVLLFSQM 103
>gi|340923666|gb|EGS18569.1| hypothetical protein CTHT_0051730 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1789
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLC--------SPLKNDPVGVLHDILISARKCCDHPYL 142
+PV +S +Q E+ C +++ ++ L LK G L +IL+ RKC HP++
Sbjct: 1086 VPVSMSVLQ-EKLCKSIMERNPQLIRSVFVQQGGKLKPSERGSLSNILMQLRKCLCHPFI 1144
Query: 143 VDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++++ V + L ++AS KL LL+ ML +LK +G RV++ Q L
Sbjct: 1145 YSQAIEDRNVPPEVMRRNL---IEASPKLMLLEIMLPKLKERGHRVLMFSQFL 1194
>gi|432090998|gb|ELK24214.1| Chromodomain-helicase-DNA-binding protein 2 [Myotis davidii]
Length = 1889
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 776 VERILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 834
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 835 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 882
>gi|149240541|ref|XP_001526146.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450269|gb|EDK44525.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 1088
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPL--KNDPVGVLHDILISARKCCDHPYLVD 144
+E + +++++QLE Y LL K + + + K + L +I++ RKCC+HPYL D
Sbjct: 396 IESNVYTRMTDMQLEWY-KKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFD 454
Query: 145 KSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKV 201
+ E+L + SGK+ +LD ML + + +GSRV+I Q +L I
Sbjct: 455 GAEPG---PPYTTDEHL---IDNSGKMIILDKMLKKFQKEGSRVLIFSQMSRVLDILEDY 508
Query: 202 CENEILGYC 210
C YC
Sbjct: 509 CYFRDYEYC 517
>gi|444726188|gb|ELW66728.1| Lymphoid-specific helicase [Tupaia chinensis]
Length = 439
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 65 GSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVG 124
G +K +T K + Y D +E I S +Q + G + + + +P++++
Sbjct: 147 GRMKRRTRKSINYSKIDDFPDELEKLI----SQIQPDVDRGRTV---VEMNTPVESEVNL 199
Query: 125 VLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQ 184
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +
Sbjct: 200 KLQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VTNSGKFLILDRMLPELKKR 255
Query: 185 GSRV 188
G ++
Sbjct: 256 GHKM 259
>gi|403258156|ref|XP_003921642.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 1827
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 771
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 772 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
>gi|307776522|pdb|3MWY|W Chain W, Crystal Structure Of The Chromodomain-atpase Portion Of
The Yeast Chd1 Chromatin Remodeler
Length = 800
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S+VQ E Y L +L + K +L +I+ +K +HPYL D +
Sbjct: 472 ERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLL-NIMNELKKASNHPYLFDNAE 530
Query: 148 QSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K + L + +SGK+ LLD +L+ LK G RV+I Q++
Sbjct: 531 ERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMV 582
>gi|410225782|gb|JAA10110.1| chromodomain helicase DNA binding protein 2 [Pan troglodytes]
gi|410301988|gb|JAA29594.1| chromodomain helicase DNA binding protein 2 [Pan troglodytes]
gi|410351375|gb|JAA42291.1| chromodomain helicase DNA binding protein 2 [Pan troglodytes]
Length = 1828
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 771
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 772 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
>gi|154273569|ref|XP_001537636.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415244|gb|EDN10597.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 952
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 13/114 (11%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCS---------PLKNDPVGVLHDILISARKCCDHPY 141
IPV +S VQ + Y ++L+K+ L LK L++IL+ RKC HP+
Sbjct: 434 IPVTMSVVQKKLY-KSILAKNPELIRSIFERNQGRTLKRTERHNLNNILMQLRKCLCHPF 492
Query: 142 LVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ K+++ V L V+AS KLQLL+ +L +L+ +G RV+I Q L
Sbjct: 493 IYSKAIEERTVNAALSHRNL---VEASSKLQLLEMLLPKLQERGHRVLIFSQFL 543
>gi|118421089|ref|NP_001262.3| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Homo
sapiens]
gi|119370320|sp|O14647.2|CHD2_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 2;
Short=CHD-2; AltName: Full=ATP-dependent helicase CHD2
gi|225000176|gb|AAI72425.1| Chromodomain helicase DNA binding protein 2 [synthetic construct]
Length = 1828
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 771
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 772 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
>gi|397491801|ref|XP_003816832.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2 [Pan paniscus]
Length = 1829
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 771
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 772 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
>gi|355693011|gb|EHH27614.1| Chromodomain-helicase-DNA-binding protein 2 [Macaca mulatta]
gi|355778318|gb|EHH63354.1| Chromodomain-helicase-DNA-binding protein 2 [Macaca fascicularis]
gi|380809122|gb|AFE76436.1| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Macaca
mulatta]
gi|383415421|gb|AFH30924.1| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Macaca
mulatta]
Length = 1828
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 771
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 772 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
>gi|6321012|ref|NP_011091.1| Chd1p [Saccharomyces cerevisiae S288c]
gi|418395|sp|P32657.1|CHD1_YEAST RecName: Full=Chromo domain-containing protein 1; AltName:
Full=ATP-dependent helicase CHD1
gi|603404|gb|AAB64691.1| Chd1p: transcriptional regulator [Saccharomyces cerevisiae]
gi|285811798|tpg|DAA07826.1| TPA: Chd1p [Saccharomyces cerevisiae S288c]
gi|392299868|gb|EIW10960.1| Chd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1468
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S+VQ E Y L +L + K +L +I+ +K +HPYL D +
Sbjct: 611 ERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLL-NIMNELKKASNHPYLFDNAE 669
Query: 148 QSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K + L + +SGK+ LLD +L+ LK G RV+I Q++
Sbjct: 670 ERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMV 721
>gi|392338968|ref|XP_003753691.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform
2 [Rattus norvegicus]
gi|392345929|ref|XP_003749407.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform
2 [Rattus norvegicus]
Length = 898
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++L RKC DHPYL D + + E+ E+L ++ASGKL LLD +L+ L + G
Sbjct: 308 LQNVLTQLRKCVDHPYLFD----GVEPEPFEVGEHL---IEASGKLHLLDRLLAFLYSGG 360
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 361 HRVLLFSQM 369
>gi|156052901|ref|XP_001592377.1| hypothetical protein SS1G_06618 [Sclerotinia sclerotiorum 1980]
gi|154704396|gb|EDO04135.1| hypothetical protein SS1G_06618 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1505
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V++S+VQL+ Y L +L K +L +I++ +K +HPY+ +
Sbjct: 666 EKIIRVELSDVQLDYYKNILTRNYAALNEGSKGQKQSLL-NIMMELKKASNHPYMFPNAE 724
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L + L + +SGK+ LLD +L++LK RV+I Q++
Sbjct: 725 EKILKGSERRDDQLKGLIASSGKMMLLDRLLAKLKKDNHRVLIFSQMV 772
>gi|119622570|gb|EAX02165.1| chromodomain helicase DNA binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 1857
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 677 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 735
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 736 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 783
>gi|443696075|gb|ELT96855.1| hypothetical protein CAPTEDRAFT_224509 [Capitella teleta]
Length = 2952
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPL-KNDPVGVLHDILISARKCCDHPYLVDKS 146
E I V+++N+Q ++Y +L ++ S S + + L + ++ RKCC+HPYLV +
Sbjct: 1252 ETIIEVELTNIQ-KKYYRAILERNFSFLSKGGTSSNIPNLMNTMMELRKCCNHPYLVTGA 1310
Query: 147 LQSLLVK------DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ +L + +L V++SGKL L+D +L +LK +V+I Q+
Sbjct: 1311 EEQILEEARLGGHELTHERQFLAMVQSSGKLVLVDKLLPKLKAGNHKVLIFSQM 1364
>gi|417404904|gb|JAA49185.1| Putative chromatin remodeling complex swi/snf component swi2
[Desmodus rotundus]
Length = 838
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 65 GSLKEKTSKYVAYGGKLDSSRFVEYWIPVQISNVQLEQYCGTLLSKS---LSLCSPLKND 121
G K +T K + Y DS +E I S +Q E L + + + P+ ++
Sbjct: 506 GRPKRRTRKLINYSEVDDSPNELEKLI----SQIQPE------LDRERPVVEVSVPVDSE 555
Query: 122 PVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSEL 181
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML EL
Sbjct: 556 VNLKLQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKVDEEL---VTNSGKFLILDRMLPEL 611
Query: 182 KNQGSRVIILFQI 194
K +G +V++ Q+
Sbjct: 612 KARGHKVLLFSQM 624
>gi|392574549|gb|EIW67685.1| hypothetical protein TREMEDRAFT_64279 [Tremella mesenterica DSM
1558]
Length = 998
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 122 PVGVLHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSEL 181
PV + +IL+ RK C HPYL L++ + D E + L + SGKL L +L +L
Sbjct: 3 PVKTMRNILMELRKVCQHPYLSAPELENEELPDDEQHKRL---INGSGKLSFLRILLPKL 59
Query: 182 KNQGSRVIILFQILI 196
K +G RV++ Q I
Sbjct: 60 KERGHRVLLFSQFKI 74
>gi|323337858|gb|EGA79098.1| Chd1p [Saccharomyces cerevisiae Vin13]
Length = 1329
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S+VQ E Y L +L + K +L +I+ +K +HPYL D +
Sbjct: 611 ERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLL-NIMNELKKASNHPYLFDNAE 669
Query: 148 QSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K + L + +SGK+ LLD +L+ LK G RV+I Q++
Sbjct: 670 ERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMV 721
>gi|395831556|ref|XP_003788863.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Otolemur
garnettii]
Length = 1790
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 771
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 772 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
>gi|428181241|gb|EKX50105.1| hypothetical protein GUITHDRAFT_67166 [Guillardia theta CCMP2712]
Length = 958
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 57 MVDAIDNLGSLKEKTSKYVAYGGKLDSSRFV----EYWIPVQISNVQLEQYCGTLLSKSL 112
+V+ + + L+++ Y+ K D R + E + V++S +Q Y ++L ++
Sbjct: 583 VVETANQIMQLRKELRPYMLRRHKEDVERSIPPKEEIIVEVEMSQLQRTTY-KSILERNF 641
Query: 113 SLCSPLKNDPVGV----LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKAS 168
LK GV L ++ + RKCC+HPYLVD + + + ++ + ++ S
Sbjct: 642 EW---LKRGAAGVQVPALRNVEMELRKCCNHPYLVDGVEEQVRSRSTA-SDPMHELIRHS 697
Query: 169 GKLQLLDTMLSELKNQGSRVIILFQIL 195
GK+ LLD ML +L+ + + +I Q +
Sbjct: 698 GKMVLLDKMLPKLRAEKHKALIFSQFI 724
>gi|259146092|emb|CAY79352.1| Chd1p [Saccharomyces cerevisiae EC1118]
gi|323348857|gb|EGA83095.1| Chd1p [Saccharomyces cerevisiae Lalvin QA23]
gi|349577825|dbj|GAA22993.1| K7_Chd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1468
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S+VQ E Y L +L + K +L +I+ +K +HPYL D +
Sbjct: 611 ERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLL-NIMNELKKASNHPYLFDNAE 669
Query: 148 QSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K + L + +SGK+ LLD +L+ LK G RV+I Q++
Sbjct: 670 ERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMV 721
>gi|256271313|gb|EEU06383.1| Chd1p [Saccharomyces cerevisiae JAY291]
Length = 1468
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S+VQ E Y L +L + K +L +I+ +K +HPYL D +
Sbjct: 611 ERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLL-NIMNELKKASNHPYLFDNAE 669
Query: 148 QSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K + L + +SGK+ LLD +L+ LK G RV+I Q++
Sbjct: 670 ERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMV 721
>gi|190405721|gb|EDV08988.1| chromo domain protein 1 [Saccharomyces cerevisiae RM11-1a]
Length = 1436
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S+VQ E Y L +L + K +L +I+ +K +HPYL D +
Sbjct: 579 ERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLL-NIMNELKKASNHPYLFDNAE 637
Query: 148 QSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K + L + +SGK+ LLD +L+ LK G RV+I Q++
Sbjct: 638 ERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMV 689
>gi|151944881|gb|EDN63140.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
Length = 1468
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S+VQ E Y L +L + K +L +I+ +K +HPYL D +
Sbjct: 611 ERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLL-NIMNELKKASNHPYLFDNAE 669
Query: 148 QSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K + L + +SGK+ LLD +L+ LK G RV+I Q++
Sbjct: 670 ERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMV 721
>gi|323451886|gb|EGB07762.1| hypothetical protein AURANDRAFT_37691, partial [Aureococcus
anophagefferens]
Length = 615
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +L+ RKCC+HPYL + + V D D V+ASGKL +LD +L++LK +G
Sbjct: 283 LQSLLMQLRKCCNHPYLFEGADPDPGVTD-------DALVEASGKLHVLDRLLTKLKAKG 335
Query: 186 SRVIILFQI 194
R ++ Q
Sbjct: 336 HRCVLFSQF 344
>gi|158293462|ref|XP_314800.4| AGAP008698-PA [Anopheles gambiae str. PEST]
gi|157016718|gb|EAA10171.4| AGAP008698-PA [Anopheles gambiae str. PEST]
Length = 2083
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV--- 143
VE + V+++++Q QY +LSK+ VG +I+I +KCC+H L
Sbjct: 835 VEQILRVEMTSIQ-RQYYKWILSKNFDALRKGMKGSVGTFLNIVIELKKCCNHAALTRPI 893
Query: 144 ----DKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ Q +V+ L +K SGKL LLD +L LK G RV+I Q++ +
Sbjct: 894 EFETQRNSQQDVVQQL---------LKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRM 942
>gi|301785221|ref|XP_002928025.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like,
partial [Ailuropoda melanoleuca]
Length = 1114
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 700 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 758
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++
Sbjct: 759 EENERENGQEVLLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMV 804
>gi|296220834|ref|XP_002756505.1| PREDICTED: lymphoid-specific helicase isoform 7 [Callithrix
jacchus]
Length = 707
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L + SGK +LD ML ELK +G
Sbjct: 429 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEELVIN---SGKFLILDRMLPELKKRG 484
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 485 HKVLLFSQM 493
>gi|198455729|ref|XP_001357539.2| GA21216 [Drosophila pseudoobscura pseudoobscura]
gi|198135371|gb|EAL24661.2| GA21216 [Drosophila pseudoobscura pseudoobscura]
Length = 1035
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q + Y LL K + + + L +IL+ RKC +HPYL D +
Sbjct: 366 EMKIFVGLSKMQRDWYTKVLL-KDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAE 424
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
D L V SGK+ +LD +L +L+ QGSRV+I Q +L I C
Sbjct: 425 PGPPYTTDTHL-------VYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCH 477
Query: 204 NEILGYC 210
+ YC
Sbjct: 478 WKNYNYC 484
>gi|195148944|ref|XP_002015422.1| GL11075 [Drosophila persimilis]
gi|194109269|gb|EDW31312.1| GL11075 [Drosophila persimilis]
Length = 1033
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V +S +Q + Y LL K + + + L +IL+ RKC +HPYL D +
Sbjct: 366 EMKIFVGLSKMQRDWYTKVLL-KDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAE 424
Query: 148 QSL-LVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ---ILIIRAKVCE 203
D L V SGK+ +LD +L +L+ QGSRV+I Q +L I C
Sbjct: 425 PGPPYTTDTHL-------VYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCH 477
Query: 204 NEILGYC 210
+ YC
Sbjct: 478 WKNYNYC 484
>gi|401625980|gb|EJS43951.1| chd1p [Saccharomyces arboricola H-6]
Length = 1470
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E + V++S+VQ E Y L +L + K +L +I+ +K +HPYL D +
Sbjct: 613 ERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLL-NIMNELKKASNHPYLFDNAE 671
Query: 148 QSLLVK----DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +L K + L + +SGK+ LLD +L+ LK G RV+I Q++
Sbjct: 672 ERVLQKFGDGKMTRENILRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMV 723
>gi|70950861|ref|XP_744718.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524786|emb|CAH76731.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 1330
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q+E Y +L+K+ + L +I + +K C+HP+L +
Sbjct: 790 VERILRVELSPIQIEYY-KNILTKNYEQLAKASGGAKNSLQNICMELKKVCNHPFLCCEP 848
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ KD EY + V +SGK+ LL+ +L LK +G+RV+I Q++
Sbjct: 849 ID----KD----EYRERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMV 889
>gi|412993179|emb|CCO16712.1| unnamed protein product [Bathycoccus prasinos]
Length = 1717
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 101 EQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVD-------KSLQSLLVK 153
E+ G LL + S KN P L +I + RK C+HP+L D + + L +
Sbjct: 766 EKNIGVLLEGAKS-----KNTPQ--LRNICMELRKVCNHPFLCDGLEDDYIQRCRLALKE 818
Query: 154 DLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQ 193
E+ LD+ ++SGK+ L +LS+LK GS+V+I Q
Sbjct: 819 GEEMPSQLDLLTQSSGKMSFLGKLLSKLKQDGSKVLIFSQ 858
>gi|308160430|gb|EFO62921.1| Chromodomain helicase-DNA-binding protein, putative [Giardia lamblia
P15]
Length = 2647
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 21/110 (19%)
Query: 89 YWIPVQISNVQ--LEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV-DK 145
+ P+QIS + LEQ L +KS + L ++L+ RK C+HPY++ D
Sbjct: 1526 HMTPLQISCSEWLLEQNYEMLTAKSYNSVK---------LQNLLMQLRKVCNHPYIIHDL 1576
Query: 146 SLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
L + ++D+ V SGK Q+LD +L +L ++G RV+I Q++
Sbjct: 1577 KLHTASLRDI---------VDGSGKFQVLDKLLDKLNSEGHRVLIFSQLI 1617
>gi|357444343|ref|XP_003592449.1| Chromatin remodeling complex subunit [Medicago truncatula]
gi|355481497|gb|AES62700.1| Chromatin remodeling complex subunit [Medicago truncatula]
Length = 1083
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++ + RKCC+HPYL V D ++ + + V+ASGK +LLD +L +L+ G
Sbjct: 651 LQNLTMQLRKCCNHPYL--------FVGDYDMYKCKEEIVRASGKFELLDRLLPKLRRAG 702
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 703 HRVLLFSQM 711
>gi|389751497|gb|EIM92570.1| hypothetical protein STEHIDRAFT_117567 [Stereum hirsutum FP-91666
SS1]
Length = 1940
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKND---------PVGVLHDILISARKCCD 138
E +P+ ++ +Q E Y ++LSK+++L + L + +IL+ RKC
Sbjct: 1155 EVIVPLSLTPLQKELY-KSVLSKNVTLLTSLTRSLGQSVKGASNKSNITNILMELRKCIQ 1213
Query: 139 HPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILI 196
HPYL+ ++ + E + L + AS KL+LL+ +L +LK +G RV++ Q +I
Sbjct: 1214 HPYLLSPDIEPRGLNQQETHKRL---IAASAKLRLLEVLLPKLKARGHRVLLFSQFVI 1268
>gi|296220830|ref|XP_002756503.1| PREDICTED: lymphoid-specific helicase isoform 5 [Callithrix
jacchus]
Length = 739
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L + SGK +LD ML ELK +G
Sbjct: 461 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEELVIN---SGKFLILDRMLPELKKRG 516
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 517 HKVLLFSQM 525
>gi|359477501|ref|XP_002281240.2| PREDICTED: transcription regulatory protein SNF2-like [Vitis
vinifera]
Length = 1114
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++ + RKCC+HPYL V D + + + V+ASGK +LLD +L +L+ G
Sbjct: 686 LQNLSMQLRKCCNHPYL--------FVGDYNIWQKKEEMVRASGKFELLDRLLPKLQKAG 737
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 738 HRVLLFSQM 746
>gi|281203782|gb|EFA77978.1| myb domain-containing protein [Polysphondylium pallidum PN500]
Length = 2536
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV---DKSL 147
+ V+++ +Q ++Y + K+ + L +I++ RKCC+HPYL+ + S
Sbjct: 677 VEVELTTIQ-KKYYRAIYEKNFTFLRKGGKGNGPSLLNIMMELRKCCNHPYLIKGAEDSE 735
Query: 148 QSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
S+L+K+ + A Y + ++ASGKL L+D +L +LK +V+I Q++ +
Sbjct: 736 TSMLMKNSD-AIYHKL-IQASGKLVLIDKLLPKLKAGNHKVLIFSQMVSV 783
>gi|367036601|ref|XP_003648681.1| hypothetical protein THITE_2106426 [Thielavia terrestris NRRL 8126]
gi|346995942|gb|AEO62345.1| hypothetical protein THITE_2106426 [Thielavia terrestris NRRL 8126]
Length = 1698
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLC------SPLKNDPVGVLHDILISARKCCDHPYLVD 144
+PV ++ +Q E+ C +++ ++ L +K G L +IL+ RKC HP++
Sbjct: 997 VPVSMTVLQ-ERLCKSIMERNPELIRSVFVQDKMKAKERGSLSNILMQLRKCLCHPFIYS 1055
Query: 145 KSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++++ + L ++AS KL LL+ ML +LK +G RV++ Q L
Sbjct: 1056 QAIEDRTLSPEVTRRNL---IEASSKLMLLEIMLPKLKERGHRVLLFSQFL 1103
>gi|193787140|dbj|BAG52346.1| unnamed protein product [Homo sapiens]
Length = 979
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSL 150
+ V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL +
Sbjct: 464 VRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLFPVAAVEA 522
Query: 151 LVKDLELAEYLDVG---VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
V L + G VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 523 PV----LPNGSNDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 565
>gi|431894397|gb|ELK04197.1| Chromodomain-helicase-DNA-binding protein 6 [Pteropus alecto]
Length = 1543
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSLCSPLKND-PVGVLHDILISARKCCDHPYLVDKSLQS 149
I V+++N+Q ++Y +L K+ S + N + L + ++ RKCC+HPYL++ + +
Sbjct: 701 IEVELTNIQ-KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEK 759
Query: 150 LLVKDLELAEYLDVG-------VKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+L +D D + A+GKL L+D +L +L G +V+I Q++
Sbjct: 760 IL-EDFRKTHSSDAPDFQLQAMIHAAGKLVLIDKLLPKLIAGGHKVLIFSQMV 811
>gi|297737012|emb|CBI26213.3| unnamed protein product [Vitis vinifera]
Length = 1110
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L ++ + RKCC+HPYL V D + + + V+ASGK +LLD +L +L+ G
Sbjct: 675 LQNLSMQLRKCCNHPYL--------FVGDYNIWQKKEEMVRASGKFELLDRLLPKLQKAG 726
Query: 186 SRVIILFQI 194
RV++ Q+
Sbjct: 727 HRVLLFSQM 735
>gi|73951131|ref|XP_536179.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 1
[Canis lupus familiaris]
Length = 1827
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 771
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++ +
Sbjct: 772 EENERENGQEVLLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
>gi|405972247|gb|EKC37026.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Crassostrea gigas]
Length = 2123
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E+ + V++S +Q ++Y +L+++ + + V +L +I++ +KCC+HPYL +
Sbjct: 925 EFIVRVELSPMQ-KKYYKYILTRNFDALNSKGGNQVSLL-NIMMDLKKCCNHPYLFPTA- 981
Query: 148 QSLLVKDLELAEYLDVGV-KASGKLQLLDTMLSELKNQGSRVIILFQI 194
S L Y + KA GKL+LL M+ +LK +G R++I Q+
Sbjct: 982 -SNDAPKLPNGMYEGTAMTKACGKLELLSNMMKKLKEKGHRLLIFSQM 1028
>gi|158259161|dbj|BAF85539.1| unnamed protein product [Homo sapiens]
Length = 1049
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 713 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 771
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++
Sbjct: 772 EENERENGQEILLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
>gi|350638405|gb|EHA26761.1| hypothetical protein ASPNIDRAFT_118945 [Aspergillus niger ATCC
1015]
Length = 1452
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
Query: 91 IPVQISNVQLEQYCGTLLSKSLSL----------CSPLKNDPVGVLHDILISARKCCDHP 140
+PV ++ VQ + Y +L+K+ L LK L++IL+ RKC HP
Sbjct: 840 VPVSMTTVQKKLY-KFILAKNPQLIKAIFQRKEGTRALKQTEKHNLNNILMQLRKCLCHP 898
Query: 141 YLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ ++++ +L V A+ K QLL+ ML +LKN+G RV+I Q L
Sbjct: 899 FVYSRAIEEKTSNAAVSHRHL---VDAAAKFQLLELMLPKLKNRGHRVLIFSQFL 950
>gi|281344850|gb|EFB20434.1| hypothetical protein PANDA_017908 [Ailuropoda melanoleuca]
Length = 1133
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H YL+
Sbjct: 693 VEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFL-NIVMELKKCCNHCYLIKPP 751
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ E+ L +++SGKL LLD +L+ L+ +G+RV+I Q++
Sbjct: 752 EENERENGQEVLLSL---IRSSGKLILLDKLLTRLRERGNRVLIFSQMV 797
>gi|431906391|gb|ELK10588.1| Chromodomain-helicase-DNA-binding protein 5 [Pteropus alecto]
Length = 1842
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 93 VQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSLQSLLV 152
V++S +Q + Y L +L S + V +L +I++ +KCC+HPYL + + ++
Sbjct: 845 VELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL-NIMMDLKKCCNHPYLFPVAAVAPVL 903
Query: 153 KDLELAEYLDVG-VKASGKLQLLDTMLSELKNQGSRVIILFQI 194
+ Y VK+SGKL LL ML +L+++G RV+I Q+
Sbjct: 904 PN---GSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQM 943
>gi|348688432|gb|EGZ28246.1| hypothetical protein PHYSODRAFT_470076 [Phytophthora sojae]
Length = 2182
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Query: 88 EYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKSL 147
E I V+++ +Q +QY + K+ S + + L++I + RKCC+HP+L+ K +
Sbjct: 1115 ETIISVELTTLQ-KQYYRAIYDKNKSFLYRGTKNGLPTLNNIQLQLRKCCNHPFLI-KGV 1172
Query: 148 QSLLVKDL----ELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
+ +++L A+ ++ ++ SGK+ L+ ++ +LK G +++I Q L
Sbjct: 1173 EERELEELGSHPTPAQVMEKTIECSGKMMLVSKLIPKLKRDGHKILIFSQFL 1224
>gi|296220822|ref|XP_002756499.1| PREDICTED: lymphoid-specific helicase isoform 1 [Callithrix
jacchus]
Length = 837
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L + SGK +LD ML ELK +G
Sbjct: 559 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEELVIN---SGKFLILDRMLPELKKRG 614
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 615 HKVLLFSQM 623
>gi|223997284|ref|XP_002288315.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975423|gb|EED93751.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 692
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLV--- 143
E + V +S +Q + Y LL ++ + + +I++ RKCC+HPYL
Sbjct: 257 TETLLMVGMSKMQKQLYKKLLLRDIEAITGKNTSSGKTAILNIVMQLRKCCNHPYLFEGV 316
Query: 144 -DKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQILII 197
D++L L E+L V+ GKL ++D +L LK +GSRV+I Q+ I
Sbjct: 317 EDRTLDPL-------GEHL---VENCGKLNMVDKLLKRLKERGSRVLIFTQMTRI 361
>gi|296220826|ref|XP_002756501.1| PREDICTED: lymphoid-specific helicase isoform 3 [Callithrix
jacchus]
Length = 805
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 126 LHDILISARKCCDHPYLVDKSLQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQG 185
L +I++ RKCC+HPYL++ + + ++ ++ E L V SGK +LD ML ELK +G
Sbjct: 527 LQNIMMLLRKCCNHPYLIEYPIDP-VTQEFKIDEEL---VINSGKFLILDRMLPELKKRG 582
Query: 186 SRVIILFQI 194
+V++ Q+
Sbjct: 583 HKVLLFSQM 591
>gi|269994446|dbj|BAI50387.1| chromodomain helicase DNA binding protein 2 [Leiolepis reevesii
rubritaeniata]
Length = 230
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 87 VEYWIPVQISNVQLEQYCGTLLSKSLSLCSPLKNDPVGVLHDILISARKCCDHPYLVDKS 146
VE + V++S +Q + Y L +L + G L +I++ +KCC+H L+
Sbjct: 53 VEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFL-NIVMELKKCCNHCCLIKPP 111
Query: 147 LQSLLVKDLELAEYLDVGVKASGKLQLLDTMLSELKNQGSRVIILFQIL 195
++ EL + L +++SGKL LLD +LS L+ +G+RV+I Q++
Sbjct: 112 EENERENSQELLQSL---IRSSGKLILLDKLLSRLRERGNRVLIFSQMV 157
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,808,267,784
Number of Sequences: 23463169
Number of extensions: 147112345
Number of successful extensions: 341961
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 2501
Number of HSP's that attempted gapping in prelim test: 339406
Number of HSP's gapped (non-prelim): 2744
length of query: 253
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 114
effective length of database: 9,097,814,876
effective search space: 1037150895864
effective search space used: 1037150895864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)