BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047066
(256 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 28/175 (16%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQI 157
+L+ ATNN+ + +IG G +G V+ G L D +A+K+ IE+ ++ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 158 NHRNVVGLLGCCLETEVPLLVNEFVK------------LPT--ISWEVRIRIAAETA--- 200
H ++V L+G C E +L+ ++++ LPT +SWE R+ I A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 201 ----------EDIKSINILLDDNYTTKVCDFGASKL-VPIDETQLSTMVQGTLGY 244
D+KSINILLD+N+ K+ DFG SK +D+T L +V+GTLGY
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 35/196 (17%)
Query: 92 KIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE-QCINK 150
K F+ EL++A++N++ ++GRGG+G V+ G L+D +A+K+ + E Q +
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 151 VVVLSQINHRNVVGLLGCCLETEVPLLVNEFV--------------KLPTISWEVRIRIA 196
V ++S HRN++ L G C+ LLV ++ P + W R RIA
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 197 AETA----------------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQG 240
+A D+K+ NILLD+ + V DFG +KL+ + + V+G
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 205
Query: 241 TLGY----YLHTSQGT 252
T+G+ YL T + +
Sbjct: 206 TIGHIAPEYLSTGKSS 221
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 28/175 (16%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQI 157
+L+ ATNN+ + +IG G +G V+ G L D +A+K+ IE+ ++ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 158 NHRNVVGLLGCCLETEVPLLVNEFVK------------LPT--ISWEVRIRIAAETA--- 200
H ++V L+G C E +L+ ++++ LPT +SWE R+ I A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 201 ----------EDIKSINILLDDNYTTKVCDFGASKL-VPIDETQLSTMVQGTLGY 244
D+KSINILLD+N+ K+ DFG SK + +T L +V+GTLGY
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 35/196 (17%)
Query: 92 KIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE-QCINK 150
K F+ EL++A++N+ ++GRGG+G V+ G L+D +A+K+ + E Q +
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 151 VVVLSQINHRNVVGLLGCCLETEVPLLVNEFV--------------KLPTISWEVRIRIA 196
V ++S HRN++ L G C+ LLV ++ P + W R RIA
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 197 AETA----------------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQG 240
+A D+K+ NILLD+ + V DFG +KL+ + + V+G
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 197
Query: 241 TLGY----YLHTSQGT 252
+G+ YL T + +
Sbjct: 198 XIGHIAPEYLSTGKSS 213
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 48/195 (24%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE-QCINK-------VV 152
+A N Y++ IG+GG+G V G L +K++ KS I+ S+ E + I K V
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 153 VLSQINHRNVVGLLGCCLETEVPLLVNEFV-----------KLPTISWEVRIRIAAETA- 200
++S +NH N+V L G L P +V EFV K I W V++R+ + A
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 201 --------------EDIKSINIL---LDDNYT--TKVCDFGASKLVPIDETQLSTMVQGT 241
D++S NI LD+N KV DFG S+ Q V G
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-------QSVHSVSGL 186
Query: 242 LGYYLHTSQGTLNKE 256
LG + + T+ E
Sbjct: 187 LGNFQWMAPETIGAE 201
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 48/195 (24%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE-QCINK-------VV 152
+A N Y++ IG+GG+G V G L +K++ KS I+ S+ E + I K V
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 153 VLSQINHRNVVGLLGCCLETEVPLLVNEFV-----------KLPTISWEVRIRIAAETA- 200
++S +NH N+V L G L P +V EFV K I W V++R+ + A
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 201 --------------EDIKSINIL---LDDNYT--TKVCDFGASKLVPIDETQLSTMVQGT 241
D++S NI LD+N KV DFG S+ Q V G
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-------QSVHSVSGL 186
Query: 242 LGYYLHTSQGTLNKE 256
LG + + T+ E
Sbjct: 187 LGNFQWMAPETIGAE 201
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 38/188 (20%)
Query: 94 FTAGELKIATNNYAYDRM------IGRGGYGTVFLGSLSDNKAIAIKK----SRIVYQSQ 143
F+ ELK TNN+ + +G GG+G V+ G + +N +A+KK I +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 144 IEQCINKVVVLSQINHRNVVGLLG--------CCLETEVP--LLVNEFVKL---PTISWE 190
+Q ++ V+++ H N+V LLG C + +P L++ L P +SW
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 191 VRIRIAAETA-------------EDIKSINILLDDNYTTKVCDFGASKLVP-IDETQLST 236
+R +IA A DIKS NILLD+ +T K+ DFG ++ +T + +
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 237 MVQGTLGY 244
+ GT Y
Sbjct: 194 RIVGTTAY 201
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 38/188 (20%)
Query: 94 FTAGELKIATNNYAYDRM------IGRGGYGTVFLGSLSDNKAIAIKK----SRIVYQSQ 143
F+ ELK TNN+ + +G GG+G V+ G + +N +A+KK I +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 144 IEQCINKVVVLSQINHRNVVGLLG--------CCLETEVP--LLVNEFVKL---PTISWE 190
+Q ++ V+++ H N+V LLG C + +P L++ L P +SW
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 191 VRIRIAAETA-------------EDIKSINILLDDNYTTKVCDFGASKLVP-IDETQLST 236
+R +IA A DIKS NILLD+ +T K+ DFG ++ +T +
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 237 MVQGTLGY 244
+ GT Y
Sbjct: 194 RIVGTTAY 201
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 37/168 (22%)
Query: 94 FTAGELKIATNNYAYDRM------IGRGGYGTVFLGSLSDNKAIAIKK----SRIVYQSQ 143
F+ ELK TNN+ + +G GG+G V+ G + +N +A+KK I +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 144 IEQCINKVVVLSQINHRNVVGLLG--------CCLETEVP--LLVNEFVKL---PTISWE 190
+Q ++ V+++ H N+V LLG C + +P L++ L P +SW
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 191 VRIRIAAETA-------------EDIKSINILLDDNYTTKVCDFGASK 225
+R +IA A DIKS NILLD+ +T K+ DFG ++
Sbjct: 128 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR 175
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 85/195 (43%), Gaps = 48/195 (24%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE-QCINK-------VV 152
+A N Y++ IG+GG+G V G L +K++ KS I+ S+ E + I K V
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 153 VLSQINHRNVVGLLGCCLETEVPLLVNEFV-----------KLPTISWEVRIRIAAETA- 200
++S +NH N+V L G L P +V EFV K I W V++R+ + A
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 201 --------------EDIKSINIL---LDDNYT--TKVCDFGASKLVPIDETQLSTMVQGT 241
D++S NI LD+N KV DF S+ Q V G
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-------QSVHSVSGL 186
Query: 242 LGYYLHTSQGTLNKE 256
LG + + T+ E
Sbjct: 187 LGNFQWMAPETIGAE 201
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 39/169 (23%)
Query: 94 FTAGELKIATNNYAYDRMI-------GRGGYGTVFLGSLSDNKAIAIKK----SRIVYQS 142
F+ ELK TNN+ +R I G GG+G V+ G + +N +A+KK I +
Sbjct: 6 FSFYELKNVTNNFD-ERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 63
Query: 143 QIEQCINKVVVLSQINHRNVVGLLGCCLETEVPLLVNEFVK-------------LPTISW 189
+Q ++ V ++ H N+V LLG + + LV + P +SW
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 190 EVRIRIAAETA-------------EDIKSINILLDDNYTTKVCDFGASK 225
R +IA A DIKS NILLD+ +T K+ DFG ++
Sbjct: 124 HXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR 172
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 158
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 151
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 172
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 213 FVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 150
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 145
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 171
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 151
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)
Query: 108 YDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNV 162
++ +IGRG +G V+ G+L DN A+K +RI ++ Q + + +++ +H NV
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 163 VGLLGCCLETE-VPLLVNEFVKLPTISWEVRIRIAAETAE-------------------- 201
+ LLG CL +E PL+V ++K + +R T +
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 202 ----DIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+ +T KV DFG ++
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 30/147 (20%)
Query: 109 DRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVV 163
DR+IG+G +G V+ G D AIK SRI Q+E + + +++ +NH NV+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 164 GLLGCCLETE------VPLLVN----EFVKLPT--------ISWEVRIRIAAE------- 198
L+G L E +P + + +F++ P IS+ +++ E
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF 145
Query: 199 TAEDIKSINILLDDNYTTKVCDFGASK 225
D+ + N +LD+++T KV DFG ++
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 25/164 (15%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQ 156
G+ I + + + IG G +G V LG + +AIK R S+ E I + V+ +
Sbjct: 1 GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMK 59
Query: 157 INHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIR---IAAET-------------- 199
++H +V L G CLE LV EF++ +S +R + AAET
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 119
Query: 200 -------AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQLST 236
D+ + N L+ +N KV DFG ++ V D+ ST
Sbjct: 120 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 96 AGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLS 155
+G+ I + + + IG G +G V LG + +AIK R S+ E I + V+
Sbjct: 2 SGKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMM 60
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIR---IAAET------------- 199
+++H +V L G CLE LV EF++ +S +R + AAET
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 120
Query: 200 --------AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQLST 236
D+ + N L+ +N KV DFG ++ V D+ ST
Sbjct: 121 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHR 160
I + + + IG G +G V LG + +AIK R S+ E I + V+ +++H
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHP 62
Query: 161 NVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIR---IAAET------------------ 199
+V L G CLE LV EF++ +S +R + AAET
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 200 ---AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQLST 236
D+ + N L+ +N KV DFG ++ V D+ ST
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 162
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHR 160
I + + + IG G +G V LG + +AIK R S+ E I + V+ +++H
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHP 62
Query: 161 NVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIR---IAAET------------------ 199
+V L G CLE LV EF++ +S +R + AAET
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 200 ---AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQLST 236
D+ + N L+ +N KV DFG ++ V D+ ST
Sbjct: 123 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 162
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHR 160
I + + + IG G +G V LG + +AIK R S+ E I + V+ +++H
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHP 60
Query: 161 NVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIR---IAAET------------------ 199
+V L G CLE LV EF++ +S +R + AAET
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 200 ---AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQLST 236
D+ + N L+ +N KV DFG ++ V D+ ST
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 160
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHR 160
I + + + IG G +G V LG + +AIK + S+ + I + V+ +++H
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHP 82
Query: 161 NVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIR---IAAET------------------ 199
+V L G CLE LV EF++ +S +R + AAET
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 200 ---AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQLST 236
D+ + N L+ +N KV DFG ++ V D+ ST
Sbjct: 143 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 182
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 31/175 (17%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSD-NKAIAIKKSRIVYQSQIE---QCINKVVVLS 155
KI Y +G GG TV+L + N +AIK I + + E + +V S
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSS 66
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISW--EVRIRIAAETA------------- 200
Q++H+N+V ++ E + LV E+++ PT+S E ++ +TA
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKH 126
Query: 201 --------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQL--STMVQGTLGYY 245
DIK NIL+D N T K+ DFG +K + ET L + V GT+ Y+
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKA--LSETSLTQTNHVLGTVQYF 179
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 26/140 (18%)
Query: 112 IGRGGYGTVFLGSL-SDNKAIAIKKSRIVYQSQIE-QCINKVVVLSQINHRNVVGLLGCC 169
IGRG +G VF G L +DN +A+K R ++ + + + +L Q +H N+V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 170 LETEVPLLVNEFVK-------LPTISWEVRIRI-------AAETAE----------DIKS 205
+ + +V E V+ L T +R++ AA E D+ +
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 206 INILLDDNYTTKVCDFGASK 225
N L+ + K+ DFG S+
Sbjct: 242 RNCLVTEKNVLKISDFGMSR 261
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 26/140 (18%)
Query: 112 IGRGGYGTVFLGSL-SDNKAIAIKKSRIVYQSQIE-QCINKVVVLSQINHRNVVGLLGCC 169
IGRG +G VF G L +DN +A+K R ++ + + + +L Q +H N+V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 170 LETEVPLLVNEFVK-------LPTISWEVRIRI-------AAETAE----------DIKS 205
+ + +V E V+ L T +R++ AA E D+ +
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 206 INILLDDNYTTKVCDFGASK 225
N L+ + K+ DFG S+
Sbjct: 242 RNCLVTEKNVLKISDFGMSR 261
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 29/144 (20%)
Query: 112 IGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG G +GTV + A+ I + + ++ + + +V ++ ++ H N+V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 171 ETEVPLLVNEFVKLPTI-------------SWEVRIRIAAETAE---------------D 202
+ +V E++ ++ R+ +A + A+ D
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRD 164
Query: 203 IKSINILLDDNYTTKVCDFGASKL 226
+KS N+L+D YT KVCDFG S+L
Sbjct: 165 LKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 29/144 (20%)
Query: 112 IGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG G +GTV + A+ I + + ++ + + +V ++ ++ H N+V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 171 ETEVPLLVNEFVKLPTI-------------SWEVRIRIAAETAE---------------D 202
+ +V E++ ++ R+ +A + A+ +
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRN 164
Query: 203 IKSINILLDDNYTTKVCDFGASKL 226
+KS N+L+D YT KVCDFG S+L
Sbjct: 165 LKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 34/177 (19%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINK 150
G+ + A ++ R +G+G +G V+L +K I K +++++Q+E Q +
Sbjct: 1 GKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRRE 58
Query: 151 VVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE-- 201
V + S + H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 202 --------------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTXLCGTLDY 172
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 31/160 (19%)
Query: 96 AGELKIATNNYAYDRMIGRGGYGTVFLGSLSD-NKAIAIKKSRIVYQSQIEQCINK---- 150
A ++K Y +G G + TV+ + N+ +AIKK ++ ++S+ + IN+
Sbjct: 2 ALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 151 -VVVLSQINHRNVVGLLGCC------------LETEVPLLV--NEFVKLPTISWEVRIRI 195
+ +L +++H N++GLL +ET++ +++ N V P+ + + +
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPS-HIKAYMLM 120
Query: 196 AAETAE----------DIKSINILLDDNYTTKVCDFGASK 225
+ E D+K N+LLD+N K+ DFG +K
Sbjct: 121 TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 34/170 (20%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLSQI 157
++ R +G+G +G V+L +K I K +++++Q+E Q +V + S +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALK--VLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 158 NHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE--------- 201
H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 202 -------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL N K+ DFG S P + T + GTL Y
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP---SSRRTTLCGTLDY 176
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 32/186 (17%)
Query: 86 GSSDTAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY- 140
GS+ T F A EL N + D+++G G +G V G L ++AIK ++ Y
Sbjct: 1 GSTQTVHEF-AKELD--ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 57
Query: 141 QSQIEQCINKVVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETA 200
+ Q + + ++ Q +H N++ L G +++ ++V E+++ ++ +R A T
Sbjct: 58 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 117
Query: 201 ------------------------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLST 236
D+ + NIL++ N KV DFG S+++ D T
Sbjct: 118 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 237 MVQGTL 242
G +
Sbjct: 178 TRGGKI 183
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 32/186 (17%)
Query: 86 GSSDTAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY- 140
GS+ T F A EL N + D+++G G +G V G L ++AIK ++ Y
Sbjct: 18 GSTQTVHEF-AKELD--ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 74
Query: 141 QSQIEQCINKVVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETA 200
+ Q + + ++ Q +H N++ L G +++ ++V E+++ ++ +R A T
Sbjct: 75 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 134
Query: 201 ------------------------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLST 236
D+ + NIL++ N KV DFG S+++ D T
Sbjct: 135 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 237 MVQGTL 242
G +
Sbjct: 195 TRGGKI 200
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 64
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 124
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAP---SSRRTTLSGTLDY 173
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 34/177 (19%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINK 150
G + A ++ R +G+G +G V+L +K I K +++++Q+E Q +
Sbjct: 1 GPRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRRE 58
Query: 151 VVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE-- 201
V + S + H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 202 --------------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDY 172
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 29/163 (17%)
Query: 109 DRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVLSQINHRNVV 163
+R+IG G +G V G L + A+AIK ++ Y + Q + + ++ Q +H NVV
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR---------------------IRIAAETA-- 200
L G + ++V EF++ + +R +R A+
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 201 -EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D + T G +
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 34/177 (19%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINK 150
G + A ++ R +G+G +G V+L +K I K +++++Q+E Q +
Sbjct: 1 GPRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRRE 58
Query: 151 VVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE-- 201
V + S + H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 202 --------------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTELCGTLDY 172
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 45/174 (25%)
Query: 86 GSSDTAKIFTAG------ELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIV 139
GS D ++ T G + +I + IG G +GTV+ G + A+ +
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP 71
Query: 140 YQSQIEQCINKVVVLSQINHRNVVGLLGCCLETEVPLLVN------------------EF 181
Q++ N+V VL + H N++ +G + ++ ++ E
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM 131
Query: 182 VKLPTISWEVRIRIAAETAE-------------DIKSINILLDDNYTTKVCDFG 222
+KL I IA +TA+ D+KS NI L ++ T K+ DFG
Sbjct: 132 IKL--------IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 177
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 45/174 (25%)
Query: 86 GSSDTAKIFTAG------ELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIV 139
GS D ++ T G + +I + IG G +GTV+ G + A+ +
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP 71
Query: 140 YQSQIEQCINKVVVLSQINHRNVVGLLGCCLETEVPLLVN------------------EF 181
Q++ N+V VL + H N++ +G + ++ ++ E
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEM 131
Query: 182 VKLPTISWEVRIRIAAETAE-------------DIKSINILLDDNYTTKVCDFG 222
+KL I IA +TA+ D+KS NI L ++ T K+ DFG
Sbjct: 132 IKL--------IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 177
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 67
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 127
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 128 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDY 176
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 66
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDY 175
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVL 154
++ N + D+++G G +G V G L ++AIK ++ Y + Q + + ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETA-------------- 200
Q +H N++ L G +++ ++V E+++ ++ +R A T
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 201 ----------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D T G +
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 62
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 122
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDY 171
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVL 154
++ N + D+++G G +G V G L ++AIK ++ Y + Q + + ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETA-------------- 200
Q +H N++ L G +++ ++V E+++ ++ +R A T
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 201 ----------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D T G +
Sbjct: 161 KYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVL 154
++ N + D+++G G +G V G L ++AIK ++ Y + Q + + ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETA-------------- 200
Q +H N++ L G +++ ++V E+++ ++ +R A T
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 201 ----------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D T G +
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVL 154
++ N + D+++G G +G V G L ++AIK ++ Y + Q + + ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETA-------------- 200
Q +H N++ L G +++ ++V E+++ ++ +R A T
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 201 ----------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D T G +
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVL 154
++ N + D+++G G +G V G L ++AIK ++ Y + Q + + ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETA-------------- 200
Q +H N++ L G +++ ++V E+++ ++ +R A T
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 201 ----------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D T G +
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 68
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 128
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDY 177
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V++G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT- 98
Query: 172 TEVPLLV-------------------NEFVKLPTISWEVRIRIAAETAE-------DIKS 205
E P + E + + +I A E E D+ +
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAA 158
Query: 206 INILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 159 RNCLVGENHVVKVADFGLSRLMTGD 183
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVL 154
++ N + D+++G G +G V G L ++AIK ++ Y + Q + + ++
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETA-------------- 200
Q +H N++ L G +++ ++V E+++ ++ +R A T
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 158
Query: 201 ----------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D T G +
Sbjct: 159 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 68
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 128
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDY 177
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 66
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDY 175
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L K I K +++++Q+E Q +V + S
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 60
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 120
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDY 169
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 34/177 (19%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINK 150
G+ + A ++ R +G+G +G V+L +K I K +++++Q+E Q +
Sbjct: 1 GKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRRE 58
Query: 151 VVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE-- 201
V + S + H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 202 --------------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + + GTL Y
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTLDY 172
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 34/170 (20%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLSQI 157
++ R +G+G +G V+L +K I K +++++Q+E Q +V + S +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALK--VLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 158 NHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE--------- 201
H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 202 -------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL N K+ DFG S P ++ T+ GTL Y
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP--SSRRDTLC-GTLDY 176
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 80
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 140
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 141 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDY 189
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L ++K I K +++++Q+E Q +V + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 63
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G ++ L+ E+ L T+ E++ R A E
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + + GTL Y
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGTLDY 172
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 153
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 154 NCLVGENHLVKVADFGLSRLMTGD 177
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 68
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 128
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDY 177
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 32/186 (17%)
Query: 86 GSSDTAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY- 140
GS+ T F A EL N + D+++G G +G V G L ++AIK ++ Y
Sbjct: 1 GSTQTVHEF-AKELD--ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 57
Query: 141 QSQIEQCINKVVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETA 200
+ Q + + ++ Q +H N++ L G +++ ++V E ++ ++ +R A T
Sbjct: 58 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 117
Query: 201 ------------------------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLST 236
D+ + NIL++ N KV DFG S+++ D T
Sbjct: 118 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 237 MVQGTL 242
G +
Sbjct: 178 TRGGKI 183
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGD 164
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 144
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 145 NCLVGENHLVKVADFGLSRLMTGD 168
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGD 169
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 172 TEVPLLVNEFVKL------------PTISWEVRIRIAAETA-------------EDIKSI 206
++ EF+ +S V + +A + + D+ +
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGD 164
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGD 164
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 64
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 124
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDY 173
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 89
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 149
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDY 198
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 63
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDY 172
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 63
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDY 172
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 40/156 (25%)
Query: 110 RMIGRGGYGTVFLGSLSDNKA----IAIKKSRIVYQSQ--IEQCINKVVVLSQINHRNVV 163
+++G G +G+V G+L +A+K ++ SQ IE+ +++ + +H NV+
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 164 GLLGCCLETEV-----PLLVNEFVK-------------------LP---TISWEVRIRIA 196
LLG C+E P+++ F+K +P + + V I +
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 197 AE-------TAEDIKSINILLDDNYTTKVCDFGASK 225
E D+ + N +L D+ T V DFG SK
Sbjct: 160 MEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGD 166
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGD 169
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGD 164
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGD 169
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVL 154
++ N + D+++G G +G V G L ++AIK ++ Y + Q + + ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETA-------------- 200
Q +H N++ L G +++ ++V E+++ ++ +R A T
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 201 ----------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG ++++ D T G +
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGD 166
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 172 TEVPLLVNEFV------------------KLPTISWEVRIRIAAETAE-------DIKSI 206
++ EF+ + + +I A E E D+ +
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGD 162
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 34/177 (19%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINK 150
G + A ++ R +G+G +G V+L +K I K +++++Q+E Q +
Sbjct: 4 GSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRRE 61
Query: 151 VVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE-- 201
V + S + H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 202 --------------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + + GTL Y
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGTLDY 175
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGD 166
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 141
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTGD 165
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGD 169
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 31/161 (19%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINK 150
G + A ++ R +G+G +G V+L +K I K +++++Q+E Q +
Sbjct: 4 GSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRRE 61
Query: 151 VVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE-- 201
V + S + H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 202 --------------DIKSINILLDDNYTTKVCDFGASKLVP 228
DIK N+LL K+ DFG S P
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 162
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVL 154
++ N + D+++G G +G V G L ++AIK ++ Y + Q + + ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETA-------------- 200
Q +H N++ L G +++ ++V E+++ ++ +R A T
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 201 ----------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG +++ D T G +
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 39/159 (24%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVL 154
++ + +I + IG G +GTV+ G + A+ + Q++ N+V VL
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 155 SQINHRNVVGLLGCCLETEVPLLVN------------------EFVKLPTISWEVRIRIA 196
+ H N++ +G + ++ ++ E +KL I IA
Sbjct: 61 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL--------IDIA 112
Query: 197 AETAE-------------DIKSINILLDDNYTTKVCDFG 222
+TA+ D+KS NI L ++ T K+ DFG
Sbjct: 113 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 151
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 66
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + + GTL Y
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTLDY 175
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ +I H +V L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 172 TEVPLL----------------VNEFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ + ++++LP + ++ +IA+ A D+++
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNE 168
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 63
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + + GTL Y
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGTLDY 172
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVL 154
++ N + D+++G G +G V G L ++AIK ++ Y + Q + + ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETA-------------- 200
Q +H N++ L G +++ ++V E ++ ++ +R A T
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 201 ----------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D T G +
Sbjct: 161 KYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 39/159 (24%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVL 154
++ + +I + IG G +GTV+ G + A+ + Q++ N+V VL
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 155 SQINHRNVVGLLGCCLETEVPLLVN------------------EFVKLPTISWEVRIRIA 196
+ H N++ +G + ++ ++ E +KL I IA
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL--------IDIA 115
Query: 197 AETAE-------------DIKSINILLDDNYTTKVCDFG 222
+TA+ D+KS NI L ++ T K+ DFG
Sbjct: 116 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 154
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 30/160 (18%)
Query: 103 TNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIE--QCINKVVVLSQINH 159
+ Y +IG G YG V + + +AIKK V++ I+ + + ++ +L+++NH
Sbjct: 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNH 111
Query: 160 RNVVGLLGCCLETEVP----------LLVNEFVKL---PTISWEVRIRI----------- 195
+VV +L + +V + ++F KL P E+ I+
Sbjct: 112 DHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKY 171
Query: 196 ---AAETAEDIKSINILLDDNYTTKVCDFGASKLVPIDET 232
A D+K N L++ + + KVCDFG ++ V E
Sbjct: 172 VHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 172 TEVPLLVN----------------EFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ +++ ++++LP + ++ +IA+ A D+++
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNE 168
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVL 154
++ N + D+++G G +G V G L ++AIK ++ Y + Q + + ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETA-------------- 200
Q +H N++ L G +++ ++V E ++ ++ +R A T
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 201 ----------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D T G +
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 172 TEVPLLVN----------------EFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ +++ ++++LP + ++ +IA+ A D+++
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNE 168
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 39/159 (24%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVL 154
++ + +I + IG G +GTV+ G + A+ + Q++ N+V VL
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 85
Query: 155 SQINHRNVVGLLGCCLETEVPLLVN------------------EFVKLPTISWEVRIRIA 196
+ H N++ +G + ++ ++ E +KL I IA
Sbjct: 86 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL--------IDIA 137
Query: 197 AETAE-------------DIKSINILLDDNYTTKVCDFG 222
+TA+ D+KS NI L ++ T K+ DFG
Sbjct: 138 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 176
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 39/159 (24%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVL 154
++ + +I + IG G +GTV+ G + A+ + Q++ N+V VL
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 155 SQINHRNVVGLLGCCLETEVPLLVN------------------EFVKLPTISWEVRIRIA 196
+ H N++ +G + ++ ++ E +KL I IA
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL--------IDIA 115
Query: 197 AETAE-------------DIKSINILLDDNYTTKVCDFG 222
+TA+ D+KS NI L ++ T K+ DFG
Sbjct: 116 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 154
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 39/159 (24%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVL 154
++ + +I + IG G +GTV+ G + A+ + Q++ N+V VL
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 78
Query: 155 SQINHRNVVGLLGCCLETEVPLLVN------------------EFVKLPTISWEVRIRIA 196
+ H N++ +G + ++ ++ E +KL I IA
Sbjct: 79 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL--------IDIA 130
Query: 197 AETAE-------------DIKSINILLDDNYTTKVCDFG 222
+TA+ D+KS NI L ++ T K+ DFG
Sbjct: 131 RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 169
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 28/154 (18%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNKAI----AIKKSRIVYQSQIEQCINKVVVLS 155
++ +N+ + R++G+G +G V L + + + +KK I+ +E + + +LS
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 156 QINHRNVVGLLGCCLETEVPLL-VNEFVKLPTISW---------EVRIRI-AAETA---- 200
+ + L CC +T L V EFV + + E R R AAE
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALM 138
Query: 201 ---------EDIKSINILLDDNYTTKVCDFGASK 225
D+K N+LLD K+ DFG K
Sbjct: 139 FLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 23/151 (15%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVL 154
A + +I + IG G +GTV+ G + A+ + Q++ N+V VL
Sbjct: 15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 155 SQINHRNVVGLLGCCLETEVPLLVN--------EFVKLPTISWEVR--IRIAAETA---- 200
+ H N++ +G ++ ++ + +E++ I IA +TA
Sbjct: 75 RKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMD 134
Query: 201 ---------EDIKSINILLDDNYTTKVCDFG 222
D+KS NI L ++ T K+ DFG
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG 165
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 23/151 (15%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVL 154
++ + +I + IG G +GTV+ G + A+ + Q++ N+V VL
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 155 SQINHRNVVGLLGCCLETEVPLLVN--------EFVKLPTISWEVR--IRIAAETA---- 200
+ H N++ +G + ++ ++ + +E++ I IA +TA
Sbjct: 75 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMD 134
Query: 201 ---------EDIKSINILLDDNYTTKVCDFG 222
D+KS NI L ++ T K+ DFG
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG 165
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 64
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 124
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P ++ T+ GTL Y
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRDTLC-GTLDY 173
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 65
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 125
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + + GTL Y
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTLDY 174
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 70/172 (40%), Gaps = 29/172 (16%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSL----SDNKAIAIKKSRIVY-QSQIEQCINKVVVL 154
+I + +++IG G G V G L + +AIK + Y + Q +++ ++
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAET--------------- 199
Q +H N++ L G + ++V E+++ ++ +R T
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 200 ---------AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + N+L+D N KV DFG S+++ D T G +
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI 216
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 23/151 (15%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVL 154
++ + +I + IG G +GTV+ G + A+ + Q++ N+V VL
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 155 SQINHRNVVGLLGCCLETEVPLLVN--------EFVKLPTISWEVR--IRIAAETA---- 200
+ H N++ +G + ++ ++ + +E++ I IA +TA
Sbjct: 63 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMD 122
Query: 201 ---------EDIKSINILLDDNYTTKVCDFG 222
D+KS NI L ++ T K+ DFG
Sbjct: 123 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG 153
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 66
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ +FG S P + T + GTL Y
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGTLDY 175
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 172 TEVPLLVN----------------EFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ ++++LP + ++ +IA+ A D+++
Sbjct: 75 EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 133
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 134 NILVGENLVCKVADFGLARLIEDNE 158
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 32/161 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIE--QCINKVVVLSQIN 158
+NY +IGRG YG V+L + NK +AIKK +++ I+ + + ++ +L+++
Sbjct: 26 VPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLK 85
Query: 159 HRNVVGLLGCCLETEV-----------------------PLLVNEFVKLPTISW-----E 190
++ L + ++ P+ + E + TI + E
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTE-QHVKTILYNLLLGE 144
Query: 191 VRIRIAAETAEDIKSINILLDDNYTTKVCDFGASKLVPIDE 231
I + D+K N LL+ + + K+CDFG ++ + D+
Sbjct: 145 KFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 172 TEVPLLVN----------------EFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ ++++LP + ++ +IA+ A D+++
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 309
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 310 NILVGENLVCKVADFGLARLIEDNE 334
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGD 164
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGD 169
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGD 164
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 172 TEVPLLVN----------------EFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ +++ ++++LP + ++ +IA+ A D+++
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNE 168
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 65
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 125
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ +FG S P + T + GTL Y
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGTLDY 174
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQI 157
+ +I + IG G +GTV+ G + A+ + Q++ N+V VL +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 158 NHRNVVGLLGCCLETEVPLLVN------------------EFVKLPTISWEVRIRIAAET 199
H N++ +G + ++ ++ E +KL I IA +T
Sbjct: 62 RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL--------IDIARQT 113
Query: 200 AE-------------DIKSINILLDDNYTTKVCDFG 222
A+ D+KS NI L ++ T K+ DFG
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 149
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGD 162
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 172 TEVPLLVN----------------EFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ ++++LP + ++ +IA+ A D+++
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 309
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 310 NILVGENLVCKVADFGLARLIEDNE 334
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 39/156 (25%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQI 157
+ +I + IG G +GTV+ G + A+ + Q++ N+V VL +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 158 NHRNVVGLLGCCLETEVPLLVN------------------EFVKLPTISWEVRIRIAAET 199
H N++ +G + ++ ++ E +KL I IA +T
Sbjct: 62 RHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL--------IDIARQT 113
Query: 200 AE-------------DIKSINILLDDNYTTKVCDFG 222
A+ D+KS NI L ++ T K+ DFG
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 149
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 172 TEVPLL----------------VNEFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ + ++++LP + ++ +IA+ A D+++
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNE 168
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 172 TEVPLL----------------VNEFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ + ++++LP + ++ +IA+ A D+++
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNE 168
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 172 TEVPLL----------------VNEFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ ++++LP + ++ +IA+ A D+++
Sbjct: 251 EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 309
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 310 NILVGENLVCKVADFGLARLIEDNE 334
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 172 TEVPLL----------------VNEFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ + ++++LP + ++ +IA+ A D+++
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNE 168
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 172 TEVPLL----------------VNEFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ + ++++LP + ++ +IA+ A D+++
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 134
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 135 NILVGENLVCKVADFGLARLIEDNE 159
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 23/150 (15%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG+G GTV+ ++ + +AI++ + Q + E IN+++V+ + + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 171 ETEVPLLVNEFV---KLPTISWEVRI---RIAAETAE----------------DIKSINI 208
+ +V E++ L + E + +IAA E DIKS NI
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 209 LLDDNYTTKVCDFGASKLVPIDETQLSTMV 238
LL + + K+ DFG + ++++ STMV
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSKRSTMV 177
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 172 TEVPLL----------------VNEFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ + ++++LP + ++ +IA+ A D+++
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 132
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 133 NILVGENLVCKVADFGLARLIEDNE 157
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 29/148 (19%)
Query: 110 RMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
+ +G G +G V++G+ + N +AIK + S E + + ++ ++ H +V L
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 170 LETEVPLLVNEFV-----------------KLPTISWEVRIRIAAETA---------EDI 203
E + +V E++ KLP + ++ ++AA A D+
Sbjct: 74 SEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLV-DMAAQVAAGMAYIERMNYIHRDL 131
Query: 204 KSINILLDDNYTTKVCDFGASKLVPIDE 231
+S NIL+ + K+ DFG ++L+ +E
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNE 159
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 172 TEVPLLVNEFVKLPTISWEVR------------------IRIAAETAE-------DIKSI 206
++ EF+ + +R I A E E D+ +
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 141
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTGD 165
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 172 TEVPLLVN----------------EFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ ++++LP + ++ +IA+ A D+++
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV-DMSAQIASGMAYVERMNYVHRDLRAA 140
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 141 NILVGENLVCKVADFGLARLIEDNE 165
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 70/172 (40%), Gaps = 29/172 (16%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSL----SDNKAIAIKKSRIVY-QSQIEQCINKVVVL 154
+I + +++IG G G V G L + +AIK + Y + Q +++ ++
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAET--------------- 199
Q +H N++ L G + ++V E+++ ++ +R T
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 200 ---------AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + N+L+D N KV DFG S+++ D T G +
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI 216
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G +G V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 172 TEVPLLVNEFV------------------KLPTISWEVRIRIAAETAE-------DIKSI 206
++ EF+ + + +I A E E D+ +
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGD 162
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 41/166 (24%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIEQCINKVVVL 154
I + RM+G+G +G+V L A+ + K+ I+ S IE+ + + +
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 155 SQINHRNVVGLLGCCLETE------VPLLVNEFVK-------------------LP---T 186
+ +H +V L+G L + +P+++ F+K LP
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 187 ISWEVRIRIAAE-------TAEDIKSINILLDDNYTTKVCDFGASK 225
+ + V I E D+ + N +L ++ T V DFG S+
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 172 TEVPLLVN----------------EFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ ++++LP + ++ +IA+ A D+++
Sbjct: 334 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 392
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 393 NILVGENLVCKVADFGLARLIEDNE 417
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 172 TEVPLLVN----------------EFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ ++++LP + ++ +IA+ A D+++
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV-DMSAQIASGMAYVERMNYVHRDLRAA 140
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 141 NILVGENLVCKVADFGLARLIEDNE 165
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 172 TEVPLL----------------VNEFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ + ++++LP + ++ +IA+ A D+++
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 310
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG +L+ +E
Sbjct: 311 NILVGENLVCKVADFGLGRLIEDNE 335
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 39/168 (23%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKK----------SRIVYQSQI-E 145
EL + Y R I G YG V G S+ +AIK+ I+ S + +
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 146 QCINKVVVLSQINHRNVVGLLGCCLETEVP-----LLVNEFVK--LPTISWEVRIRIAAE 198
+ + ++ +L+ +H N++GL + E P LV E ++ L + + RI I+ +
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 199 TAE---------------------DIKSINILLDDNYTTKVCDFGASK 225
+ D+ NILL DN +CDF ++
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 172 TEVPLLVN----------------EFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ ++++LP + ++ +IA+ A D+++
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLRAA 136
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 137 NILVGENLVCKVADFGLARLIEDNE 161
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 172 TEVPLLVNEFVKLPTI--------SWEV----------RIRIAAETAE-------DIKSI 206
++ EF+ + EV +I A E E ++ +
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 386
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 387 NCLVGENHLVKVADFGLSRLMTGD 410
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 39/168 (23%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKK----------SRIVYQSQI-E 145
EL + Y R I G YG V G S+ +AIK+ I+ S + +
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 146 QCINKVVVLSQINHRNVVGLLGCCLETEVP-----LLVNEFVK--LPTISWEVRIRIAAE 198
+ + ++ +L+ +H N++GL + E P LV E ++ L + + RI I+ +
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 199 TAE---------------------DIKSINILLDDNYTTKVCDFGASK 225
+ D+ NILL DN +CDF ++
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 172 TEVPLLVNEFVKLPTI--------SWEV----------RIRIAAETAE-------DIKSI 206
++ EF+ + EV +I A E E ++ +
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 344
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 345 NCLVGENHLVKVADFGLSRLMTGD 368
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G YG V+ G K+ ++E+ + + V+ +I H N+V LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 172 TEVPLLVNEFVKLPTI--------SWEV----------RIRIAAETAE-------DIKSI 206
++ EF+ + EV +I A E E ++ +
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 347
Query: 207 NILLDDNYTTKVCDFGASKLVPID 230
N L+ +N+ KV DFG S+L+ D
Sbjct: 348 NCLVGENHLVKVADFGLSRLMTGD 371
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 39/156 (25%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQI 157
+ +I + IG G +GTV+ G + A+ + Q++ N+V VL +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 158 NHRNVVGLLGCCLETEVPLLVN------------------EFVKLPTISWEVRIRIAAET 199
H N++ +G ++ ++ E +KL I IA +T
Sbjct: 62 RHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL--------IDIARQT 113
Query: 200 AE-------------DIKSINILLDDNYTTKVCDFG 222
A+ D+KS NI L ++ T K+ DFG
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 149
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 85 SGSSDTAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQI 144
S + K + E ++ +G G +G V++G + + +A+K + S
Sbjct: 2 SQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP- 60
Query: 145 EQCINKVVVLSQINHRNVVGLLGCCLETEVPLLVN--------EFVKLPT---ISWEVRI 193
+ + + ++ Q+ H+ +V L + + ++ +F+K P+ ++ +
Sbjct: 61 DAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 120
Query: 194 RIAAETAE-------------DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
+AA+ AE D+++ NIL+ D + K+ DFG ++L+ +E
Sbjct: 121 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 171
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 31/156 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 89
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ L T+ E++ R A E
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 149
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVP 228
DIK N+LL K+ DFG S P
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 185
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 23/134 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
IG G +GTV+ G + A+ I K Q + N+V VL + H N++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 172 TEVPLLVN--------EFVKLPTISWEV--RIRIAAETAE-------------DIKSINI 208
+ ++ + + + +++ I IA +TA+ D+KS NI
Sbjct: 104 DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNI 163
Query: 209 LLDDNYTTKVCDFG 222
L + T K+ DFG
Sbjct: 164 FLHEGLTVKIGDFG 177
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 25/160 (15%)
Query: 96 AGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLS 155
G +I + + + +G G +G V G +AIK + S+ ++ I + V+
Sbjct: 1 GGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMM 59
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVK---LPTISWEVRIRI--------------AAE 198
++H +V L G C + ++ E++ L E+R R A E
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 119
Query: 199 TAE-------DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
E D+ + N L++D KV DFG S+ V DE
Sbjct: 120 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 159
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 27/145 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G+G +G V++G+ + +AIK + S E + + V+ ++ H +V L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 172 TEVPLL----------------VNEFVKLPTISWEVRIRIAAETA---------EDIKSI 206
+ ++ + ++++LP + ++ +IA+ A D+ +
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV-DMAAQIASGMAYVERMNYVHRDLAAA 143
Query: 207 NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+ +N KV DFG ++L+ +E
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNE 168
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 25/159 (15%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQ 156
G +I + + + +G G +G V G +AIK + S+ ++ I + V+
Sbjct: 2 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMN 60
Query: 157 INHRNVVGLLGCCLETEVPLLVNEFVK---LPTISWEVRIRI--------------AAET 199
++H +V L G C + ++ E++ L E+R R A E
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 200 AE-------DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
E D+ + N L++D KV DFG S+ V DE
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 159
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 25/159 (15%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQ 156
G +I + + + +G G +G V G +AIK + S+ ++ I + V+
Sbjct: 8 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMN 66
Query: 157 INHRNVVGLLGCCLETEVPLLVNEFVK---LPTISWEVRIRI--------------AAET 199
++H +V L G C + ++ E++ L E+R R A E
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 126
Query: 200 AE-------DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
E D+ + N L++D KV DFG S+ V DE
Sbjct: 127 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 165
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 25/159 (15%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQ 156
G +I + + + +G G +G V G +AIK + S+ ++ I + V+
Sbjct: 1 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMN 59
Query: 157 INHRNVVGLLGCCLETEVPLLVNEFVK---LPTISWEVRIRI--------------AAET 199
++H +V L G C + ++ E++ L E+R R A E
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 119
Query: 200 AE-------DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
E D+ + N L++D KV DFG S+ V DE
Sbjct: 120 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 158
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 25/159 (15%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQ 156
G +I + + + +G G +G V G +AIK + S+ ++ I + V+
Sbjct: 17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMN 75
Query: 157 INHRNVVGLLGCCLETEVPLLVNEFVK---LPTISWEVRIRI--------------AAET 199
++H +V L G C + ++ E++ L E+R R A E
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 200 AE-------DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
E D+ + N L++D KV DFG S+ V DE
Sbjct: 136 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G +G V++G + + +A+K + S + + + ++ Q+ H+ +V L +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 172 TEVPLLVN--------EFVKLPT---ISWEVRIRIAAETAE-------------DIKSIN 207
+ ++ +F+K P+ ++ + +AA+ AE D+++ N
Sbjct: 90 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 149
Query: 208 ILLDDNYTTKVCDFGASKLVPIDE 231
IL+ D + K+ DFG ++L+ +E
Sbjct: 150 ILVSDTLSCKIADFGLARLIEDNE 173
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 27/144 (18%)
Query: 112 IGRGGYGTVFLGSL-SDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG G G V + ++ S K +A+KK + Q + E N+VV++ H NVV + L
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 171 ETEVPLLVNEFVK---LPTISWEVRI---RIAA----------------ETAEDIKSINI 208
+ +V EF++ L I R+ +IAA DIKS +I
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 151
Query: 209 LLDDNYTTKVCDFG----ASKLVP 228
LL + K+ DFG SK VP
Sbjct: 152 LLTHDGRVKLSDFGFCAQVSKEVP 175
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G +G V++G + + +A+K + S + + + ++ Q+ H+ +V L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 172 TEVPLLVN--------EFVKLPT---ISWEVRIRIAAETAE-------------DIKSIN 207
+ ++ +F+K P+ ++ + +AA+ AE D+++ N
Sbjct: 75 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 134
Query: 208 ILLDDNYTTKVCDFGASKLVPIDE 231
IL+ D + K+ DFG ++L+ +E
Sbjct: 135 ILVSDTLSCKIADFGLARLIEDNE 158
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G +G V++G + + +A+K + S + + + ++ Q+ H+ +V L +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 172 TEVPLLVN--------EFVKLPT---ISWEVRIRIAAETAE-------------DIKSIN 207
+ ++ +F+K P+ ++ + +AA+ AE D+++ N
Sbjct: 85 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 144
Query: 208 ILLDDNYTTKVCDFGASKLVPIDE 231
IL+ D + K+ DFG ++L+ +E
Sbjct: 145 ILVSDTLSCKIADFGLARLIEDNE 168
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G +G V++G + + +A+K + S + + + ++ Q+ H+ +V L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 172 TEVPLLVN--------EFVKLPT---ISWEVRIRIAAETAE-------------DIKSIN 207
+ ++ +F+K P+ ++ + +AA+ AE D+++ N
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 145
Query: 208 ILLDDNYTTKVCDFGASKLVPIDE 231
IL+ D + K+ DFG ++L+ +E
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNE 169
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G +G V++G + + +A+K + S + + + ++ Q+ H+ +V L +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 172 TEVPLLVN--------EFVKLPT---ISWEVRIRIAAETAE-------------DIKSIN 207
+ ++ +F+K P+ ++ + +AA+ AE D+++ N
Sbjct: 81 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 140
Query: 208 ILLDDNYTTKVCDFGASKLVPIDE 231
IL+ D + K+ DFG ++L+ +E
Sbjct: 141 ILVSDTLSCKIADFGLARLIEDNE 164
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G +G V++G + + +A+K + S + + + ++ Q+ H+ +V L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 172 TEVPLLVN--------EFVKLPT---ISWEVRIRIAAETAE-------------DIKSIN 207
+ ++ +F+K P+ ++ + +AA+ AE D+++ N
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 208 ILLDDNYTTKVCDFGASKLVPIDE 231
IL+ D + K+ DFG ++L+ +E
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNE 163
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 25/159 (15%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQ 156
G +I + + + +G G +G V G +AIK + S+ ++ I + V+
Sbjct: 17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMN 75
Query: 157 INHRNVVGLLGCCLETEVPLLVNEFVK---LPTISWEVRIRI--------------AAET 199
++H +V L G C + ++ E++ L E+R R A E
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 200 AE-------DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
E D+ + N L++D KV DFG S+ V DE
Sbjct: 136 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 38/164 (23%)
Query: 99 LKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKV----VVL 154
L+I + +IG GG+G V+ ++ +A+K +R I Q I V +
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFV------------KLPT---ISWEVRI------ 193
+ + H N++ L G CL+ LV EF ++P ++W V+I
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNY 120
Query: 194 ----RIAAETAEDIKSINILLDD--------NYTTKVCDFGASK 225
I D+KS NIL+ N K+ DFG ++
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G +G V++G + + +A+K + S + + + ++ Q+ H+ +V L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 172 TEVPLLVN--------EFVKLPT---ISWEVRIRIAAETAE-------------DIKSIN 207
+ ++ +F+K P+ ++ + +AA+ AE D+++ N
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 208 ILLDDNYTTKVCDFGASKLVPIDE 231
IL+ D + K+ DFG ++L+ +E
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNE 163
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G +G V++G + + +A+K + S + + + ++ Q+ H+ +V L +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 172 TEVPLLVN--------EFVKLPT---ISWEVRIRIAAETAE-------------DIKSIN 207
+ ++ +F+K P+ ++ + +AA+ AE D+++ N
Sbjct: 82 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 141
Query: 208 ILLDDNYTTKVCDFGASKLVPIDE 231
IL+ D + K+ DFG ++L+ +E
Sbjct: 142 ILVSDTLSCKIADFGLARLIEDNE 165
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 35/146 (23%)
Query: 109 DRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGC 168
+ ++GRG +G V K +AIK+ I +S+ + I ++ LS++NH N+V L G
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQ--IESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 169 CLETEVPLLVNEFVK-------------LP------TISWEVR----------IRIAAET 199
CL LV E+ + LP +SW ++ ++ A
Sbjct: 70 CLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 200 AEDIKSINILLDDNYTT-KVCDFGAS 224
D+K N+LL T K+CDFG +
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 27/144 (18%)
Query: 112 IGRGGYGTVFLGSL-SDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG G G V + ++ S K +A+KK + Q + E N+VV++ H NVV + L
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 171 ETEVPLLVNEFVK---LPTISWEVRI---RIAA----------------ETAEDIKSINI 208
+ +V EF++ L I R+ +IAA DIKS +I
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 147
Query: 209 LLDDNYTTKVCDFG----ASKLVP 228
LL + K+ DFG SK VP
Sbjct: 148 LLTHDGRVKLSDFGFCAQVSKEVP 171
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G +G V++G + + +A+K + S + + + ++ Q+ H+ +V L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 172 TEVPLLVN--------EFVKLPT---ISWEVRIRIAAETAE-------------DIKSIN 207
+ ++ +F+K P+ ++ + +AA+ AE D+++ N
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 208 ILLDDNYTTKVCDFGASKLVPIDE 231
IL+ D + K+ DFG ++L+ +E
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNE 163
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 35/146 (23%)
Query: 109 DRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGC 168
+ ++GRG +G V K +AIK+ I +S+ + I ++ LS++NH N+V L G
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQ--IESESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 169 CLETEVPLLVNEFVK-------------LP------TISWEVR----------IRIAAET 199
CL LV E+ + LP +SW ++ ++ A
Sbjct: 71 CLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 200 AEDIKSINILLDDNYTT-KVCDFGAS 224
D+K N+LL T K+CDFG +
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G +G V++G + + +A+K + S + + + ++ Q+ H+ +V L +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 172 TEVPLLVN--------EFVKLPT---ISWEVRIRIAAETAE-------------DIKSIN 207
+ ++ +F+K P+ ++ + +AA+ AE D+++ N
Sbjct: 89 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 148
Query: 208 ILLDDNYTTKVCDFGASKLVPIDE 231
IL+ D + K+ DFG ++L+ +E
Sbjct: 149 ILVSDTLSCKIADFGLARLIEDNE 172
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 27/144 (18%)
Query: 112 IGRGGYGTVFLGSL-SDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG G G V + ++ S K +A+KK + Q + E N+VV++ H NVV + L
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 171 ETEVPLLVNEFVK---LPTISWEVRI---RIAA----------------ETAEDIKSINI 208
+ +V EF++ L I R+ +IAA DIKS +I
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 158
Query: 209 LLDDNYTTKVCDFG----ASKLVP 228
LL + K+ DFG SK VP
Sbjct: 159 LLTHDGRVKLSDFGFCAQVSKEVP 182
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G +G V++G + + +A+K + S + + + ++ Q+ H+ +V L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 172 TEVPLLVN--------EFVKLPT---ISWEVRIRIAAETAE-------------DIKSIN 207
+ ++ +F+K P+ ++ + +AA+ AE D+++ N
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 145
Query: 208 ILLDDNYTTKVCDFGASKLVPIDE 231
IL+ D + K+ DFG ++L+ +E
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNE 169
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 27/144 (18%)
Query: 112 IGRGGYGTVFLGSL-SDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG G G V + ++ S K +A+KK + Q + E N+VV++ H NVV + L
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 171 ETEVPLLVNEFVK---LPTISWEVRI---RIAA----------------ETAEDIKSINI 208
+ +V EF++ L I R+ +IAA DIKS +I
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 156
Query: 209 LLDDNYTTKVCDFG----ASKLVP 228
LL + K+ DFG SK VP
Sbjct: 157 LLTHDGRVKLSDFGFCAQVSKEVP 180
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 34/158 (21%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIE--QCINKVVVLSQIN 158
+NY +IGRG YG V+L + K +AIKK +++ I+ + + ++ +L+++
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK 83
Query: 159 HRNVVGLLGCCLETEV-----------------------PL-LVNEFVKLPTISW----- 189
++ L + ++ P+ L E +K TI +
Sbjct: 84 SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIK--TILYNLLLG 141
Query: 190 EVRIRIAAETAEDIKSINILLDDNYTTKVCDFGASKLV 227
E I + D+K N LL+ + + KVCDFG ++ +
Sbjct: 142 ENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 27/156 (17%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFL-GSLSDNKAIA---IKKSRIVYQSQIEQCINKVVVLS 155
K + ++ R +G G +G V L S + + A +KK +V Q+E ++ ++LS
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFV-------------KLPTIS---WEVRIRIAAE- 198
+ H ++ + G + + ++ +++ + P + + +A E
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 199 ------TAEDIKSINILLDDNYTTKVCDFGASKLVP 228
D+K NILLD N K+ DFG +K VP
Sbjct: 122 LHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 27/144 (18%)
Query: 112 IGRGGYGTVFLGSL-SDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG G G V + ++ S K +A+KK + Q + E N+VV++ H NVV + L
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 171 ETEVPLLVNEFVK---LPTISWEVRI---RIAA----------------ETAEDIKSINI 208
+ +V EF++ L I R+ +IAA DIKS +I
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 201
Query: 209 LLDDNYTTKVCDFG----ASKLVP 228
LL + K+ DFG SK VP
Sbjct: 202 LLTHDGRVKLSDFGFCAQVSKEVP 225
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 23/150 (15%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG+G GTV+ ++ + +AI++ + Q + E IN+++V+ + + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 171 ETEVPLLVNEFV---KLPTISWEVRI---RIAAETAE----------------DIKSINI 208
+ +V E++ L + E + +IAA E DIKS NI
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 209 LLDDNYTTKVCDFGASKLVPIDETQLSTMV 238
LL + + K+ DFG + ++++ S MV
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSKRSXMV 177
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 68
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ + E++ R A E
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSY 128
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + T + GTL Y
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDY 177
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 23/150 (15%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG+G GTV+ ++ + +AI++ + Q + E IN+++V+ + + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 171 ETEVPLLVNEFV---KLPTISWEVRI---RIAAETAE----------------DIKSINI 208
+ +V E++ L + E + +IAA E DIKS NI
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 209 LLDDNYTTKVCDFGASKLVPIDETQLSTMV 238
LL + + K+ DFG + ++++ S MV
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSKRSEMV 177
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIG----- 89
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 90 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 23/150 (15%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG+G GTV+ ++ + +AI++ + Q + E IN+++V+ + + N+V L L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 171 ETEVPLLVNEFV---KLPTISWEVRI---RIAAETAE----------------DIKSINI 208
+ +V E++ L + E + +IAA E DIKS NI
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 148
Query: 209 LLDDNYTTKVCDFGASKLVPIDETQLSTMV 238
LL + + K+ DFG + ++++ S MV
Sbjct: 149 LLGMDGSVKLTDFGFCAQITPEQSKRSXMV 178
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 91 AKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINK 150
K GE A+ + GR GY TV + L +N + S++ +++
Sbjct: 28 GKTLGEGEFGKVVKATAF-HLKGRAGYTTVAVKMLKENAS----------PSELRDLLSE 76
Query: 151 VVVLSQINHRNVVGLLGCCLETEVPLLVNEFVK 183
VL Q+NH +V+ L G C + LL+ E+ K
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAK 109
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 91 AKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINK 150
K GE A+ + GR GY TV + L +N + S++ +++
Sbjct: 28 GKTLGEGEFGKVVKATAF-HLKGRAGYTTVAVKMLKENAS----------PSELRDLLSE 76
Query: 151 VVVLSQINHRNVVGLLGCCLETEVPLLVNEFVK 183
VL Q+NH +V+ L G C + LL+ E+ K
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAK 109
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 85
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 86 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 91 AKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINK 150
K GE A+ + GR GY TV + L +N + S++ +++
Sbjct: 28 GKTLGEGEFGKVVKATAF-HLKGRAGYTTVAVKMLKENAS----------PSELRDLLSE 76
Query: 151 VVVLSQINHRNVVGLLGCCLETEVPLLVNEFVK 183
VL Q+NH +V+ L G C + LL+ E+ K
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAK 109
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 85
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 86 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 27/144 (18%)
Query: 112 IGRGGYGTVFLGSL-SDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG G G V + ++ S K +A+KK + Q + E N+VV++ H NVV + L
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 171 ETEVPLLVNEFVK---LPTISWEVRI---RIAA----------------ETAEDIKSINI 208
+ +V EF++ L I R+ +IAA DIKS +I
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 278
Query: 209 LLDDNYTTKVCDFG----ASKLVP 228
LL + K+ DFG SK VP
Sbjct: 279 LLTHDGRVKLSDFGFCAQVSKEVP 302
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 37/176 (21%)
Query: 84 RSGS---SDTAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIKK---S 136
R+GS D A++F + + ++ R IG G +G V+ + +++ +AIKK S
Sbjct: 34 RAGSLKDPDVAELFFKDDPEKLFSDL---REIGHGSFGAVYFARDVRNSEVVAIKKMSYS 90
Query: 137 RIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLETEVPLLVNEFV-----------KLP 185
+ + I +V L ++ H N + GC L LV E+ K P
Sbjct: 91 GKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP 150
Query: 186 TISWEVRIRIAAETA--------------EDIKSINILLDDNYTTKVCDFGASKLV 227
EV I A D+K+ NILL + K+ DFG++ ++
Sbjct: 151 L--QEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 34/172 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVVLS 155
A ++ R +G+G +G V+L +K I K +++++Q+E Q +V + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRREVEIQS 68
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR-------IRIAAETAE------- 201
+ H N++ L G + L+ E+ + E++ R A E
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSY 128
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LL K+ DFG S P + + GTL Y
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLXGTLDY 177
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 23/150 (15%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG+G GTV+ ++ + +AI++ + Q + E IN+++V+ + + N+V L L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 171 ETEVPLLVNEFV---KLPTISWEVRI---RIAAETAE----------------DIKSINI 208
+ +V E++ L + E + +IAA E +IKS NI
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNI 148
Query: 209 LLDDNYTTKVCDFGASKLVPIDETQLSTMV 238
LL + + K+ DFG + ++++ STMV
Sbjct: 149 LLGMDGSVKLTDFGFCAQITPEQSKRSTMV 178
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 46/178 (25%)
Query: 91 AKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGS-LSDNKAIAI---------KKSRIVY 140
A+IF EL+ +++G G +GTV G + + ++I I K R +
Sbjct: 7 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 59
Query: 141 QSQIEQCINKVVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTI------------- 187
Q+ + ++ + ++H ++V LLG C + + LV +++ L ++
Sbjct: 60 QA----VTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGP 114
Query: 188 ----SWEVRIRIAAETAED-------IKSINILLDDNYTTKVCDFGASKLVPIDETQL 234
+W V+I E+ + + N+LL +V DFG + L+P D+ QL
Sbjct: 115 QLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 89
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 90 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 29/163 (17%)
Query: 109 DRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVLSQINHRNVV 163
+R+IG G +G V G L +AIK ++ Y + Q + + ++ Q +H N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 164 GLLGCCLETEVPLLVNEFVK-----------------------LPTISWEVR-IRIAAET 199
L G +++ ++V E+++ L IS ++ +
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 200 AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D T G +
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 189
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 46/178 (25%)
Query: 91 AKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGS-LSDNKAIAI---------KKSRIVY 140
A+IF EL+ +++G G +GTV G + + ++I I K R +
Sbjct: 25 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 77
Query: 141 QSQIEQCINKVVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTI------------- 187
Q+ + ++ + ++H ++V LLG C + + LV +++ L ++
Sbjct: 78 QA----VTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGP 132
Query: 188 ----SWEVRIRIAAETAED-------IKSINILLDDNYTTKVCDFGASKLVPIDETQL 234
+W V+I E+ + + N+LL +V DFG + L+P D+ QL
Sbjct: 133 QLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 190
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 29/140 (20%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
IG+G +G V LG NK +A+K I + + + + V++Q+ H N+V LLG +E
Sbjct: 29 IGKGEFGDVMLGDYRGNK-VAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 172 TEVPL-LVNEFVKLPTISWEVRIR------------------IAAETAE-------DIKS 205
+ L +V E++ ++ +R R A E E D+ +
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 145
Query: 206 INILLDDNYTTKVCDFGASK 225
N+L+ ++ KV DFG +K
Sbjct: 146 RNVLVSEDNVAKVSDFGLTK 165
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 29/142 (20%)
Query: 110 RMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
+ IG+G +G V LG NK +A+K I + + + + V++Q+ H N+V LLG
Sbjct: 18 QTIGKGEFGDVMLGDYRGNK-VAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 170 LETEVPL-LVNEFVKLPTISWEVRIR------------------IAAETAE-------DI 203
+E + L +V E++ ++ +R R A E E D+
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 134
Query: 204 KSINILLDDNYTTKVCDFGASK 225
+ N+L+ ++ KV DFG +K
Sbjct: 135 AARNVLVSEDNVAKVSDFGLTK 156
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 29/142 (20%)
Query: 110 RMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
+ IG+G +G V LG NK +A+K I + + + + V++Q+ H N+V LLG
Sbjct: 199 QTIGKGEFGDVMLGDYRGNK-VAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 170 LETEVPL-LVNEFVKLPTISWEVRIR------------------IAAETAE-------DI 203
+E + L +V E++ ++ +R R A E E D+
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 315
Query: 204 KSINILLDDNYTTKVCDFGASK 225
+ N+L+ ++ KV DFG +K
Sbjct: 316 AARNVLVSEDNVAKVSDFGLTK 337
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 31/147 (21%)
Query: 110 RMIGRGGYGTVFLG-SLSDNKAIAIKK---SRIVYQSQIEQCINKVVVLSQINHRNVVGL 165
R IG G +G V+ + +++ +AIKK S + + I +V L ++ H N +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 166 LGCCLETEVPLLVNEFV-----------KLPTISWEVRIRIAAETA-------------- 200
GC L LV E+ K P EV I A
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPL--QEVEIAAVTHGALQGLAYLHSHNMIH 138
Query: 201 EDIKSINILLDDNYTTKVCDFGASKLV 227
D+K+ NILL + K+ DFG++ ++
Sbjct: 139 RDVKAGNILLSEPGLVKLGDFGSASIM 165
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 29/140 (20%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
IG+G +G V LG NK +A+K I + + + + V++Q+ H N+V LLG +E
Sbjct: 14 IGKGEFGDVMLGDYRGNK-VAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 172 TEVPL-LVNEFVKLPTISWEVRIR------------------IAAETAE-------DIKS 205
+ L +V E++ ++ +R R A E E D+ +
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA 130
Query: 206 INILLDDNYTTKVCDFGASK 225
N+L+ ++ KV DFG +K
Sbjct: 131 RNVLVSEDNVAKVSDFGLTK 150
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 105
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 106 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 157
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 158 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 200
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 30/181 (16%)
Query: 91 AKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAI-AIK---KSRIVYQSQIEQ 146
+F E + +++ R IG+G +G V + +D K + A+K K + V ++++
Sbjct: 3 PPVFDENE-DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRN 61
Query: 147 CINKVVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR--IRIAAETAE--- 201
++ ++ + H +V L + E +V + + + + ++ + ET +
Sbjct: 62 VFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI 121
Query: 202 ------------------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLG 243
D+K NILLD++ + DF + ++P ETQ++TM GT
Sbjct: 122 CELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITTMA-GTKP 179
Query: 244 Y 244
Y
Sbjct: 180 Y 180
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 87
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 88 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 89
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 90 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGL 141
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 85
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 86 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 54/184 (29%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 89
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 90 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGYYLHTSQ 250
D+K N+LL+ K+CDFG +++ D + + + +
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 251 GTLN 254
LN
Sbjct: 202 IMLN 205
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 54/184 (29%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 90
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 91 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 142
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGYYLHTSQ 250
D+K N+LL+ K+CDFG +++ D + + + +
Sbjct: 143 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 251 GTLN 254
LN
Sbjct: 203 IMLN 206
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 90
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 91 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 142
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 143 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 91
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 92 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 143
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 144 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 186
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 82
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 83 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 134
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 135 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 177
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 89
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 90 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 83
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 84 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 135
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 136 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 93
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 94 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 145
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 146 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 188
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 85
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 86 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 83
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 84 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 135
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 136 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 48/185 (25%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV-NEFVKLPTISWEVR--------IRIA 196
++++ +L I H NVV LLG C + PL+V EF K +S +R ++A
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 197 AET-------------------------------AEDIKSINILLDDNYTTKVCDFGASK 225
E D+ + NILL + K+CDFG ++
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 226 LVPID 230
+ D
Sbjct: 188 DIXKD 192
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L H N++G
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG----- 87
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 88 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDH 182
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
R +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 165 LLGCCLET--EVPLLVNEFVKLPTISWEVR--------IRIAAETAE------------- 201
G C L+ EF+ ++ ++ I++ T++
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 202 ---DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
D+ + NIL+++ K+ DFG +K++P D+
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 171
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G +G V++G + + +A+K + S + + + ++ Q+ H+ +V L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 172 TEVPLLVN--------EFVKLPT---ISWEVRIRIAAETAE-------------DIKSIN 207
+ ++ +F+K P+ ++ + +AA+ AE ++++ N
Sbjct: 76 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAAN 135
Query: 208 ILLDDNYTTKVCDFGASKLVPIDE 231
IL+ D + K+ DFG ++L+ +E
Sbjct: 136 ILVSDTLSCKIADFGLARLIEDNE 159
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 48/180 (26%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV-NEFVKLPTISWEVR--------IRIA 196
++++ +L I H NVV LLG C + PL+V EF K +S +R ++A
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 197 AET-------------------------------AEDIKSINILLDDNYTTKVCDFGASK 225
E D+ + NILL + K+CDFG ++
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 46/183 (25%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV------------------NEFVKLPT- 186
++++ +L I H NVV LLG C + PL+V NEFV
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 187 ------ISWEVRIRIAAETAE-------------DIKSINILLDDNYTTKVCDFGASKLV 227
++ E I + + A+ D+ + NILL + K+CDFG ++ +
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 228 PID 230
D
Sbjct: 199 XKD 201
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 48/180 (26%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV-NEFVKLPTISWEVR--------IRIA 196
++++ +L I H NVV LLG C + PL+V EF K +S +R ++A
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 197 AET-------------------------------AEDIKSINILLDDNYTTKVCDFGASK 225
E D+ + NILL + K+CDFG ++
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 32/144 (22%)
Query: 111 MIGRGGYGTVFLGSLSDN-KAIAIKKSRIVYQSQIEQCINKVVV-----LSQINHRNVVG 164
++G G YG V D + +AIKK +S ++ + K+ + L Q+ H N+V
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKK---FLESDDDKMVKKIAMREIKLLKQLRHENLVN 88
Query: 165 LLGCCLETEVPLLVNEFVK---------LPT-ISWEVRIRIAAE-------------TAE 201
LL C + + LV EFV P + ++V + +
Sbjct: 89 LLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHR 148
Query: 202 DIKSINILLDDNYTTKVCDFGASK 225
DIK NIL+ + K+CDFG ++
Sbjct: 149 DIKPENILVSQSGVVKLCDFGFAR 172
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 25/155 (16%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHR 160
I + + + +G G +G V G +AIK + S+ ++ I + V+ ++H
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHE 59
Query: 161 NVVGLLGCCLETEVPLLVNEFVK---LPTISWEVRIRI--------------AAETAE-- 201
+V L G C + ++ E++ L E+R R A E E
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 202 -----DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
D+ + N L++D KV DFG S+ V DE
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 154
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L H N++G
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG----- 87
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 88 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 67/156 (42%), Gaps = 25/156 (16%)
Query: 103 TNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQC-INKVVVLSQINHRN 161
++ + ++G+G +G + + + + K I + + ++ + +V V+ + H N
Sbjct: 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPN 68
Query: 162 VVGLLGCCLETEVPLLVNEFVKLPTI-----------SWEVRIRIAAETA---------- 200
V+ +G + + + E++K T+ W R+ A + A
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 201 ---EDIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+ S N L+ +N V DFG ++L+ ++TQ
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 42/169 (24%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSL------SDNKAIAIKKSRIVYQSQIEQCINKVVVL 154
I +N R +G G +G VFL D +A+K + + + + +L
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 155 SQINHRNVVGLLGCCLETEVPLLVNEFVK----------------------LPT-ISWEV 191
+ + H ++V G C+E + ++V E++K PT ++
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 192 RIRIAAETA-------------EDIKSINILLDDNYTTKVCDFGASKLV 227
+ IA + A D+ + N L+ +N K+ DFG S+ V
Sbjct: 130 MLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV 178
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCLE 171
+G G G V++G + + +A+K + S + + + ++ Q+ H+ +V L +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 172 TEVPLLVN--------EFVKLPT---ISWEVRIRIAAETAE-------------DIKSIN 207
+ ++ +F+K P+ ++ + +AA+ AE D+++ N
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 208 ILLDDNYTTKVCDFGASKLV 227
IL+ D + K+ DFG ++L+
Sbjct: 140 ILVSDTLSCKIADFGLARLI 159
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 36/179 (20%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFL---------GSLSDNKAIAIKKSRIVYQSQI-EQCIN 149
K+ N+ +++G G YG VFL G L K + KK+ IV +++ E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVL--KKATIVQKAKTTEHTRT 107
Query: 150 KVVVLSQINHRNVVGLLGCCLETEVPL-LVNEFVKLPTI-----------SWEVRIRI-- 195
+ VL I + L +TE L L+ +++ + EV+I +
Sbjct: 108 ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGE 167
Query: 196 ---AAETAE-------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
A E DIK NILLD N + DFG SK DET+ + GT+ Y
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AI+K S +Q+ ++ + ++ +L + H N++G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 89
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 90 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+CDFG +++ D
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 28/156 (17%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAI----AIKKSRIVYQSQIEQCINKVVV 153
++K+ ++ +M+G+G +G VFL A+KK ++ +E + + V
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 154 LSQINHRNVVGLLGCCLETEVPL-LVNEFVKLPTISWEVR-------IRIAAETAE---- 201
LS + + C +T+ L V E++ + + ++ R AE
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 131
Query: 202 ------------DIKSINILLDDNYTTKVCDFGASK 225
D+K NILLD + K+ DFG K
Sbjct: 132 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ AE + IK +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 171
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 47/184 (25%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV------------------NEFVKLPT- 186
++++ +L I H NVV LLG C + PL+V NEFV T
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 187 -------------ISWEVRIRIAAE-------TAEDIKSINILLDDNYTTKVCDFGASKL 226
I + ++ E D+ + NILL + K+CDFG ++
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 227 VPID 230
+ D
Sbjct: 198 IXKD 201
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 48/185 (25%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV-NEFVKLPTISWEVR--------IRIA 196
++++ +L I H NVV LLG C + PL+V EF K +S +R ++A
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 197 AET-------------------------------AEDIKSINILLDDNYTTKVCDFGASK 225
E D+ + NILL + K+CDFG ++
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 226 LVPID 230
+ D
Sbjct: 188 DIXKD 192
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 44/176 (25%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV------------------NEFVKLPT- 186
++++ +L I H NVV LLG C + PL+V NEFV
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 187 ----------ISWEVRIRIAAE-------TAEDIKSINILLDDNYTTKVCDFGASK 225
I + ++ E D+ + NILL + K+CDFG ++
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 36/171 (21%)
Query: 86 GSSDTAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY- 140
GS + AK +KI + +IG G +G V G L +AIK + Y
Sbjct: 3 GSMEFAKEIDVSYVKI-------EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYT 55
Query: 141 QSQIEQCINKVVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRI------- 193
+ Q + +++ ++ Q H N++ L G + +++ EF++ + +R+
Sbjct: 56 ERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV 115
Query: 194 --------------RIAAETA---EDIKSINILLDDNYTTKVCDFGASKLV 227
R AE + D+ + NIL++ N KV DFG S+ +
Sbjct: 116 IQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL 166
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 28/156 (17%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAI----AIKKSRIVYQSQIEQCINKVVV 153
++K+ ++ +M+G+G +G VFL A+KK ++ +E + + V
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 154 LSQINHRNVVGLLGCCLETEVPL-LVNEFVKLPTISWEVR-------IRIAAETAE---- 201
LS + + C +T+ L V E++ + + ++ R AE
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 130
Query: 202 ------------DIKSINILLDDNYTTKVCDFGASK 225
D+K NILLD + K+ DFG K
Sbjct: 131 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 48/185 (25%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV-NEFVKLPTISWEVR--------IRIA 196
++++ +L I H NVV LLG C + PL+V EF K +S +R ++A
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 197 AET-------------------------------AEDIKSINILLDDNYTTKVCDFGASK 225
E D+ + NILL + K+CDFG ++
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 226 LVPID 230
+ D
Sbjct: 197 DIXKD 201
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 48/180 (26%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV-NEFVKLPTISWEVR--------IRIA 196
++++ +L I H NVV LLG C + PL+V EF K +S +R ++A
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 197 AET-------------------------------AEDIKSINILLDDNYTTKVCDFGASK 225
E D+ + NILL + K+CDFG ++
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 48/180 (26%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV-NEFVKLPTISWEVR--------IRIA 196
++++ +L I H NVV LLG C + PL+V EF K +S +R ++A
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 197 AET-------------------------------AEDIKSINILLDDNYTTKVCDFGASK 225
E D+ + NILL + K+CDFG ++
Sbjct: 174 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGS-LSDNKAIAIKKSRIVYQSQIEQCINKVV-----VLSQINHRNVV 163
+++G G +GTV+ G + D + + I + V + NK + V++ + V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 164 GLLGCCLETEVPLLVN--------EFVK--------LPTISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ + V+ ++W ++I ED++ +
Sbjct: 83 RLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVH 142
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG ++L+ IDET+
Sbjct: 143 RDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 48/180 (26%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV-NEFVKLPTISWEVR--------IRIA 196
++++ +L I H NVV LLG C + PL+V EF K +S +R ++A
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 197 AET-------------------------------AEDIKSINILLDDNYTTKVCDFGASK 225
E D+ + NILL + K+CDFG ++
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 112 IGRGGYGTVFLGSLSDN-KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
IG G G V + + K +A+KK + Q + E N+VV++ +H NVV + L
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 171 ETEVPLLVNEFVK---LPTISWEVRI---RIA----------------AETAEDIKSINI 208
+ +V EF++ L I R+ +IA DIKS +I
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSI 172
Query: 209 LLDDNYTTKVCDFG----ASKLVP 228
LL + K+ DFG SK VP
Sbjct: 173 LLTSDGRIKLSDFGFCAQVSKEVP 196
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 32/145 (22%)
Query: 112 IGRGGYGTVFLGSLSDN-KAIAIKKSRIVYQSQIEQCINKVV-----VLSQINHRNVVGL 165
IG G YG VF D + +AIKK +S+ + I K+ +L Q+ H N+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKK---FLESEDDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 166 LGCCLETEVPLLVNEFVK------------------LPTISWEVRIRI-----AAETAED 202
L LV E+ + +I+W+ + D
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRD 127
Query: 203 IKSINILLDDNYTTKVCDFGASKLV 227
+K NIL+ + K+CDFG ++L+
Sbjct: 128 VKPENILITKHSVIKLCDFGFARLL 152
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L++ ++V+ ++W V+I ED + +
Sbjct: 83 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 105
Query: 170 LETEVPLLVNEFVKLPTIS----------------------------------WEV---- 191
+N+ ++ PTI +++
Sbjct: 106 --------INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGL 157
Query: 192 -RIRIAAETAEDIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
I A D+K N+LL+ K+CDFG +++ D
Sbjct: 158 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L++ ++V+ ++W V+I ED + +
Sbjct: 83 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 105 NYAYDRMIGRGGYGTVFLGS-LSDNKAIAIKKSRI---VYQSQIEQCINKVVVLSQINHR 160
N+ ++ IGRG + V+ + L D +A+KK +I + CI ++ +L Q+NH
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 161 NVV 163
NV+
Sbjct: 93 NVI 95
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 29/148 (19%)
Query: 109 DRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVLSQINHRNVV 163
+ +IG G +G V G L +AIK + Y + Q + +++ ++ Q H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVRI---------------------RIAAETA-- 200
L G + +++ EF++ + +R+ R AE +
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYV 140
Query: 201 -EDIKSINILLDDNYTTKVCDFGASKLV 227
D+ + NIL++ N KV DFG S+ +
Sbjct: 141 HRDLAARNILVNSNLVCKVSDFGLSRFL 168
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 30/163 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVY-QSQIEQCINKVVVLSQINHRNVV 163
++IG G +G V+ G L + +AIK + Y + Q + + ++ Q +H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVRIR---------------IAAETA-------- 200
L G + + +++ E+++ + +R + IAA
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 169
Query: 201 -EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D T G +
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 212
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L++ ++V+ ++W V+I ED + +
Sbjct: 85 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 144
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 145 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 177
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L++ ++V+ ++W V+I ED + +
Sbjct: 84 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 34/160 (21%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI-----EQCI 148
T+ + + NY + IG+G + V L + K +A+ RI+ ++Q+ ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAV---RIIDKTQLNSSSLQKLF 61
Query: 149 NKVVVLSQINHRNVVGLLGCCLETEVPL-LVNEFV-------------KLPTISWEVRIR 194
+V ++ +NH N+V L +ETE L LV E+ ++ + R
Sbjct: 62 REVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 120
Query: 195 IAAETAE----------DIKSINILLDDNYTTKVCDFGAS 224
+ D+K+ N+LLD + K+ DFG S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L++ ++V+ ++W V+I ED + +
Sbjct: 83 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 175
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 34/160 (21%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI-----EQCI 148
T+ + + NY + IG+G + V L + K +A+ RI+ ++Q+ ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAV---RIIDKTQLNSSSLQKLF 61
Query: 149 NKVVVLSQINHRNVVGLLGCCLETEVPL-LVNEFV-------------KLPTISWEVRIR 194
+V ++ +NH N+V L +ETE L LV E+ ++ + R
Sbjct: 62 REVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 120
Query: 195 IAAETAE----------DIKSINILLDDNYTTKVCDFGAS 224
+ D+K+ N+LLD + K+ DFG S
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 36/162 (22%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCIN 149
TA EL Y +G G YG+V S D ++ +AIKK +QS+I ++
Sbjct: 36 TAWEL---PKTYVSPTHVGSGAYGSV--CSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR 90
Query: 150 KVVVLSQINHRNVVGLLGCCLETE-----------VPLLVNEFVKLPTISWEVR------ 192
++++L + H NV+GLL +P + + K+ + +
Sbjct: 91 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLV 150
Query: 193 ---------IRIAAETAEDIKSINILLDDNYTTKVCDFGASK 225
I A D+K N+ ++++ K+ DFG ++
Sbjct: 151 YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L++ ++V+ ++W V+I ED + +
Sbjct: 82 RLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 141
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 174
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L++ ++V+ ++W V+I ED + +
Sbjct: 82 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 141
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 174
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L++ ++V+ ++W V+I ED + +
Sbjct: 81 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L++ ++V+ ++W V+I ED + +
Sbjct: 85 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 144
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 145 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 177
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 83 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 25/139 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHRNVVGLLGCC 169
+G G YG V+ S + +A+K+ R+ + + I ++ +L +++H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 170 LETEVPLLVNEFVK--LPTISWEVR---------------IRIAAETAE------DIKSI 206
LV EF++ L + E + +R A + D+K
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQ 148
Query: 207 NILLDDNYTTKVCDFGASK 225
N+L++ + K+ DFG ++
Sbjct: 149 NLLINSDGALKLADFGLAR 167
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 25/139 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHRNVVGLLGCC 169
+G G YG V+ S + +A+K+ R+ + + I ++ +L +++H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 170 LETEVPLLVNEFVK--LPTISWEVR---------------IRIAAETAE------DIKSI 206
LV EF++ L + E + +R A + D+K
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQ 148
Query: 207 NILLDDNYTTKVCDFGASK 225
N+L++ + K+ DFG ++
Sbjct: 149 NLLINSDGALKLADFGLAR 167
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 31/158 (19%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVV 153
K +++ R +G+G +G V+L NK I K ++++SQ+E Q ++ +
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALK--VLFKSQLEKEGVEHQLRREIEI 67
Query: 154 LSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIR----------IAAETAE-- 201
S + H N++ + + + L+ EF + E++ E A+
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVP 228
DIK N+L+ K+ DFG S P
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 106 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 165
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 166 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 198
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 31/158 (19%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVV 153
K +++ R +G+G +G V+L NK I K ++++SQ+E Q ++ +
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALK--VLFKSQLEKEGVEHQLRREIEI 68
Query: 154 LSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIR----------IAAETAE-- 201
S + H N++ + + + L+ EF + E++ E A+
Sbjct: 69 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 128
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVP 228
DIK N+L+ K+ DFG S P
Sbjct: 129 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 166
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 36/162 (22%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCIN 149
TA EL Y +G G YG+V S D ++ +AIKK +QS+I ++
Sbjct: 18 TAWEL---PKTYVSPTHVGSGAYGSV--CSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR 72
Query: 150 KVVVLSQINHRNVVGLLGCCLETE-----------VPLLVNEFVKLPTISWEVR------ 192
++++L + H NV+GLL +P + + K+ + +
Sbjct: 73 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV 132
Query: 193 ---------IRIAAETAEDIKSINILLDDNYTTKVCDFGASK 225
I A D+K N+ ++++ K+ DFG ++
Sbjct: 133 YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 28/147 (19%)
Query: 105 NYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK--KSRIVYQSQIEQCINKVVVLSQINHRN 161
NY + IG+G + V L + K +A+K + S +++ +V ++ +NH N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 162 VVGLLGCCLETEVPL-LVNEFVK-------LPTISW----EVRIRIAAETA--------- 200
+V L +ETE L LV E+ L W E R + +
Sbjct: 68 IVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 201 ---EDIKSINILLDDNYTTKVCDFGAS 224
D+K+ N+LLD + K+ DFG S
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 180
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 173
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 75 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 134
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 135 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 167
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 31/154 (20%)
Query: 110 RMIGRGGYGTVFLG-------SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNV 162
+++G G +GTV+ G ++ AI I ++ +E +++ ++++ ++H ++
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDHPHL 102
Query: 163 VGLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAE----- 201
V LLG CL + L+ E+V ++W V+I E
Sbjct: 103 VRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 162
Query: 202 --DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+ + N+L+ K+ DFG ++L+ DE +
Sbjct: 163 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 196
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 31/154 (20%)
Query: 110 RMIGRGGYGTVFLG-------SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNV 162
+++G G +GTV+ G ++ AI I ++ +E +++ ++++ ++H ++
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDHPHL 79
Query: 163 VGLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAE----- 201
V LLG CL + L+ E+V ++W V+I E
Sbjct: 80 VRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 139
Query: 202 --DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+ + N+L+ K+ DFG ++L+ DE +
Sbjct: 140 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 173
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 18/98 (18%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKS---RIVY---------Q 141
+ A + + A + +GRG +G V S A IKKS R V
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQAS-----AFGIKKSPTCRTVAVKMLKEGATA 71
Query: 142 SQIEQCINKVVVLSQINHR-NVVGLLGCCLETEVPLLV 178
S+ + + ++ +L+ I H NVV LLG C + PL+V
Sbjct: 72 SEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMV 109
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 202 DIKSINILLDDNYTTKVCDFGASK 225
D+ + NILL +N K+CDFG ++
Sbjct: 224 DLAARNILLSENNVVKICDFGLAR 247
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 28/157 (17%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK--KSRIVYQSQIEQCINKV 151
T+ + + NY + IG+G + V L + K +A+K + S +++ +V
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV 64
Query: 152 VVLSQINHRNVVGLLGCCLETEVPL-LVNEFV-------------KLPTISWEVRIRIAA 197
++ +NH N+V L +ETE L LV E+ ++ + R
Sbjct: 65 RIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 198 ETAE----------DIKSINILLDDNYTTKVCDFGAS 224
+ D+K+ N+LLD + K+ DFG S
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 87 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 146
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 147 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 179
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 28/157 (17%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK--KSRIVYQSQIEQCINKV 151
T+ + + NY + IG+G + V L + K +A+K + S +++ +V
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV 64
Query: 152 VVLSQINHRNVVGLLGCCLETEVPL-LVNEFV-------------KLPTISWEVRIRIAA 197
++ +NH N+V L +ETE L LV E+ ++ + R
Sbjct: 65 RIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 198 ETAE----------DIKSINILLDDNYTTKVCDFGAS 224
+ D+K+ N+LLD + K+ DFG S
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 83 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 175
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K VY Q E + + +
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S+ NH+N+V +G L++
Sbjct: 101 IISKFNHQNIVRCIGVSLQS 120
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 91 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 150
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 151 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 183
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 112 IGRGGYGTVFLGSL------SDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGL 165
+G G +G VFL D +A+K + +S + + +L+ + H+++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 166 LGCCLETEVPLLVNEFVK 183
G C E L+V E+++
Sbjct: 86 FGVCTEGRPLLMVFEYMR 103
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 28/157 (17%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK--KSRIVYQSQIEQCINKV 151
T+ + + NY + IG+G + V L + K +A+K + S +++ +V
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV 64
Query: 152 VVLSQINHRNVVGLLGCCLETEVPL-LVNEFV-------------KLPTISWEVRIRIAA 197
++ +NH N+V L +ETE L LV E+ ++ + R
Sbjct: 65 RIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 198 ETAE----------DIKSINILLDDNYTTKVCDFGAS 224
+ D+K+ N+LLD + K+ DFG S
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQS-QIEQCINKVVVLSQINHRNVVGLLGCC 169
+GRGG+G VF + D+ AIK+ R+ + E+ + +V L+++ H +V
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 73
Query: 170 LETEVPLLVNE----FVKLPTISWEVRIRIAAETAEDIKSINILLDDNYTTK 217
LET E ++K + W +++ + D S+ I D ++TK
Sbjct: 74 LETPPEKWQEEMDEIWLKDESTDWP----LSSPSPMDAPSVKIRRMDPFSTK 121
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 112 IGRGGYGTVFLGSL------SDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGL 165
+G G +G VFL D +A+K + +S + + +L+ + H+++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 166 LGCCLETEVPLLVNEFVK 183
G C E L+V E+++
Sbjct: 80 FGVCTEGRPLLMVFEYMR 97
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++G G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 78 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVH 137
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 138 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 170
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 75/176 (42%), Gaps = 39/176 (22%)
Query: 87 SSDTAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQ 146
SS K + +I + ++ +G G +G V++ + + + +A+K + S +E
Sbjct: 171 SSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEA 229
Query: 147 CINKVVVLSQINHRNVVGLLGCCLETEVPL-LVNEFV-----------------KLPTIS 188
+ + V+ + H +V L T+ P+ ++ EF+ LP +
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL- 286
Query: 189 WEVRIRIAAETAE-------------DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
I +A+ AE D+++ NIL+ + K+ DFG ++++ +E
Sbjct: 287 ----IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQI 157
E I +IG+G +G V+ G AI + + Q++ +V+ Q
Sbjct: 27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQT 86
Query: 158 NHRNVVGLLGCCL 170
H NVV +G C+
Sbjct: 87 RHENVVLFMGACM 99
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 136
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 137 IHRNLATRNILVENENRVKIGDFGLTKVLPQDK 169
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 29/151 (19%)
Query: 109 DRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVLSQINHRNVV 163
+++IG G +G V G L +AIK + Y + Q +++ ++ Q +H NV+
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVRIR---------------IAAE---------T 199
L G ++ +++ EF++ ++ +R IAA
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 157
Query: 200 AEDIKSINILLDDNYTTKVCDFGASKLVPID 230
D+ + NIL++ N KV DFG S+ + D
Sbjct: 158 HRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 112 IGRGGYGTVFLGSL------SDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGL 165
+G G +G VFL D +A+K + +S + + +L+ + H+++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 166 LGCCLETEVPLLVNEFVK 183
G C E L+V E+++
Sbjct: 109 FGVCTEGRPLLMVFEYMR 126
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 38/182 (20%)
Query: 96 AGELKIATNNYAYDRMIGRGGYGTVFL---------GSLSDNKAIAIKKSRIVYQSQIEQ 146
AG K +++ +++G+G +G VFL G L K + KK+ + + ++
Sbjct: 20 AGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL--KKATLKVRDRVRT 77
Query: 147 CINKVVVLSQINHRNVVGLLGCCLETEVPL-LVNEFVK----LPTISWEVRIR------I 195
+ + + L+ +NH VV L +TE L L+ +F++ +S EV
Sbjct: 78 KMERDI-LADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 135
Query: 196 AAETA-------------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
AE A D+K NILLD+ K+ DFG SK ID + + GT+
Sbjct: 136 LAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEA-IDHEKKAYSFCGTV 194
Query: 243 GY 244
Y
Sbjct: 195 EY 196
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 48/180 (26%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV------------------NEFV---KL 184
++++ +L I H NVV LLG C + PL+V NEFV +
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 185 PT------------ISWEVRIRIAAE-------TAEDIKSINILLDDNYTTKVCDFGASK 225
P I + ++ E D+ + NILL + K+CDFG ++
Sbjct: 139 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 166
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 67/152 (44%), Gaps = 36/152 (23%)
Query: 110 RMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
+ +G G +G V++G +++ +A+K + S ++ + + ++ + H +V L
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 170 LETEVPLLVNEF-----------------VKLPTISWEVRIRIAAETAE----------- 201
+ E ++ EF V LP + I +A+ AE
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERKNYI 131
Query: 202 --DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
D+++ N+L+ ++ K+ DFG ++++ +E
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNE 163
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 31/158 (19%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIE------QCINKVVV 153
K +++ R +G+G +G V+L NK I K ++++SQ+E Q ++ +
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALK--VLFKSQLEKEGVEHQLRREIEI 67
Query: 154 LSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIR----------IAAETAE-- 201
S + H N++ + + + L+ EF + E++ E A+
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVP 228
DIK N+L+ K+ DFG S P
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 142
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 175
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 140
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 173
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 186
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 141
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 174
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 171
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 186
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 54/163 (33%)
Query: 112 IGRGGYGTVFLGSLSDNKA-IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
IG G YG V + NK +AIKK S +Q+ ++ + ++ +L + H N++G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 85
Query: 170 LETEVPLLVNEFVKLPTISWEVRIRIAAETAE---------------------------- 201
+N+ ++ PTI + I + E
Sbjct: 86 --------INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 202 -----------DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+K N+LL+ K+ DFG +++ D
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDH 180
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 34/162 (20%)
Query: 93 IFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI-----EQ 146
I +A + + NY + IG+G + V L + + +A+K I+ ++Q+ ++
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVK---IIDKTQLNPTSLQK 60
Query: 147 CINKVVVLSQINHRNVVGLLGCCLETEVPL-LVNEFV-------------KLPTISWEVR 192
+V ++ +NH N+V L +ETE L LV E+ ++ +
Sbjct: 61 LFREVRIMKILNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 119
Query: 193 IRIAAETAE----------DIKSINILLDDNYTTKVCDFGAS 224
R + D+K+ N+LLD + K+ DFG S
Sbjct: 120 FRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 133
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 166
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 134
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 167
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 110 RMIGRGGYGTVFL---GSLSDN--KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVG 164
+ +G+G +G+V + L DN + +A+KK + + + ++ +L + H N+V
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAEDIKSI------------------ 206
G C L LP S ++ E + IK +
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 139
Query: 207 --------NILLDDNYTTKVCDFGASKLVPIDE 231
NIL+++ K+ DFG +K++P D+
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLTKVLPQDK 172
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 51/175 (29%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRIVYQS-------------- 142
+ N Y IG+G YG V L + +DN A+K K +++ Q+
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 143 ---------QIEQCINKVVVLSQINHRNVVGLLGCCLETE------VPLLVNE--FVKLP 185
IEQ ++ +L +++H NVV L+ + V LVN+ +++P
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129
Query: 186 TISW--EVRIRIAAET--------------AEDIKSINILLDDNYTTKVCDFGAS 224
T+ E + R + DIK N+L+ ++ K+ DFG S
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 68
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQ-INHRNVVGLLGCC 169
+G G YG V L + +A+A+K + + I K + +++ +NH NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 170 LETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAEDIKSI 206
E + L E+ + +P + V + T DIK
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 207 NILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 173
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 68
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 68
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 13/53 (24%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGYYLHTSQGTLN 254
D+K N+LLDDN K+ DFG S ++ T G +L TS G+ N
Sbjct: 133 DLKPENLLLDDNLNVKIADFGLSNIM-------------TDGNFLKTSCGSPN 172
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQ-INHRNVVGLLGCC 169
+G G YG V L + +A+A+K + + I K + +++ +NH NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 170 LETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAEDIKSI 206
E + L E+ + +P + V + T DIK
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 207 NILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 109 DRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVLSQINHRNVV 163
+++IG G +G V G L +AIK + Y Q +++ ++ Q +H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR------------------------IRIAAET 199
L G + + +++ E+++ ++ +R + +
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAV 153
Query: 200 AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D T G +
Sbjct: 154 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 196
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 36/159 (22%)
Query: 105 NYAYDRMIGRGGYGTVFLGS-LSDNKAIAIK---KSRIVYQSQIEQ---CINKVVVLSQI 157
Y ++G+GG+GTVF G L+D +AIK ++R++ S + C +V +L ++
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 158 ----NHRNVVGLL-------GCCLETEVPLLVNEFV-----KLPTISWEVRIRIAAETA- 200
H V+ LL G L E PL + K P R A
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 201 -----------EDIKSINILLD-DNYTTKVCDFGASKLV 227
DIK NIL+D K+ DFG+ L+
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL 190
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 44/176 (25%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV------------------NEFVKLPT- 186
++++ +L I H NVV LLG C + PL+V NEFV
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 187 ----ISWEVRIRIAAETAE-------------DIKSINILLDDNYTTKVCDFGASK 225
++ E I + + A+ D+ + NILL + K+ DFG ++
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 72/171 (42%), Gaps = 39/171 (22%)
Query: 87 SSDTAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQ 146
SS K + +I + ++ +G G +G V++ + + + +A+K + S +E
Sbjct: 165 SSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEA 223
Query: 147 CINKVVVLSQINHRNVVGLLGCCLETEVPL-LVNEFV-----------------KLPTIS 188
+ + V+ + H +V L T+ P+ ++ EF+ LP +
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL- 280
Query: 189 WEVRIRIAAETAE-------------DIKSINILLDDNYTTKVCDFGASKL 226
I +A+ AE D+++ NIL+ + K+ DFG +++
Sbjct: 281 ----IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 327
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 29/160 (18%)
Query: 109 DRMIGRGGYGTVFLG-----SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVV 163
D+ +G G +GTV G + A+ I K+ + ++ + + V+ Q+++ +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR----------IRIAAETA------------- 200
++G C E E +LV E +L ++ ++ I + + +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 201 EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQG 240
D+ + N+LL + K+ DFG SK + DE G
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG 174
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 28/167 (16%)
Query: 87 SSDTAKIFTAGELKIATNNYAYDRMIGRGGYGTV----FLGSLSDNKAIAIKKSRIVYQS 142
DT + + + +I R IG G +G V ++ + A+AIK +
Sbjct: 373 EEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD 432
Query: 143 QI-EQCINKVVVLSQINHRNVVGLLGCCLETEVPLLVN--------EFVKLPTISWEV-- 191
+ E+ + + + + Q +H ++V L+G E V +++ F+++ S ++
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLAS 492
Query: 192 ------RIRIAAETAE-------DIKSINILLDDNYTTKVCDFGASK 225
++ A E DI + N+L+ N K+ DFG S+
Sbjct: 493 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 34/179 (18%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLG---SLSDNKAI----AIKKSRIVYQSQIEQCIN 149
G K + + +++G+G +G VFL S SD + + +KK+ + + ++ +
Sbjct: 18 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 77
Query: 150 KVVVLSQINHRNVVGLLGCCLETEVPL-LVNEFVK----LPTISWEVRIR------IAAE 198
+ + L ++NH +V L +TE L L+ +F++ +S EV AE
Sbjct: 78 RDI-LVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 135
Query: 199 TA-------------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
A D+K NILLD+ K+ DFG SK ID + + GT+ Y
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEY 193
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 34.3 bits (77), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 112 IGRGGYGTVFLGSLSDN-KAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCCL 170
+G G YG+V+ + + +AIK+ + +S +++ I ++ ++ Q + +VV G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQ--VPVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 171 ETEVPLLVNEFVKLPTISWEVRIRIAAETAE------------------------DIKSI 206
+ +V E+ ++S +R+R T + DIK+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAG 154
Query: 207 NILLDDNYTTKVCDFGAS 224
NILL+ K+ DFG +
Sbjct: 155 NILLNTEGHAKLADFGVA 172
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 34/179 (18%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLG---SLSDNKAI----AIKKSRIVYQSQIEQCIN 149
G K + + +++G+G +G VFL S SD + + +KK+ + + ++ +
Sbjct: 17 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 150 KVVVLSQINHRNVVGLLGCCLETEVPL-LVNEFVK----LPTISWEVRIR------IAAE 198
+ + L ++NH +V L +TE L L+ +F++ +S EV AE
Sbjct: 77 RDI-LVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 199 TA-------------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
A D+K NILLD+ K+ DFG SK ID + + GT+ Y
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEY 192
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 34/179 (18%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLG---SLSDNKAI----AIKKSRIVYQSQIEQCIN 149
G K + + +++G+G +G VFL S SD + + +KK+ + + ++ +
Sbjct: 17 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 150 KVVVLSQINHRNVVGLLGCCLETEVPL-LVNEFVK----LPTISWEVRIR------IAAE 198
+ + L ++NH +V L +TE L L+ +F++ +S EV AE
Sbjct: 77 RDI-LVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 199 TA-------------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
A D+K NILLD+ K+ DFG SK ID + + GT+ Y
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEY 192
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 43/192 (22%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVV 152
A E + +N +IGRG YG V+ GSL D + +A+K + E+ I +V
Sbjct: 4 AASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVP 62
Query: 153 VLSQIN-HRNVVGLLGCCLETEVP-LLVNE---------FVKLPTISWEVRIRIA----- 196
++ N R +VG + + LLV E ++ L T W R+A
Sbjct: 63 LMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTR 122
Query: 197 -----------------AETAEDIKSINILLDDNYTTKVCDFGAS------KLV-PIDET 232
A + D+ S N+L+ ++ T + DFG S +LV P +E
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 233 QLSTMVQGTLGY 244
+ GT+ Y
Sbjct: 183 NAAISEVGTIRY 194
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 109 DRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVLSQINHRNVV 163
+++IG G +G V G L +AIK + Y Q +++ ++ Q +H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR------------------------IRIAAET 199
L G + + +++ E+++ ++ +R + +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 132
Query: 200 AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D T G +
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 175
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 33.9 bits (76), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 111 MIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGC 168
+IG GG+G VF D K IK R+ Y + E+ +V L++++H N+V GC
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIK--RVKYNN--EKAEREVKALAKLDHVNIVHYNGC 72
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 159 HRNVVGLLGCCLETEVPL-LVNEFVKL 184
H N+V LL + TE L LV EF+ +
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFLSM 89
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 29/160 (18%)
Query: 109 DRMIGRGGYGTVFLG-----SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVV 163
D+ +G G +GTV G + A+ I K+ + ++ + + V+ Q+++ +V
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR----------IRIAAETA------------- 200
++G C E E +LV E +L ++ ++ I + + +
Sbjct: 72 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 130
Query: 201 EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQG 240
D+ + N+LL + K+ DFG SK + DE G
Sbjct: 131 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 170
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 159 HRNVVGLLGCCLETEVPL-LVNEFVKL 184
H N+V LL + TE L LV EF+ +
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFLSM 87
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 29/160 (18%)
Query: 109 DRMIGRGGYGTVFLG-----SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVV 163
D+ +G G +GTV G + A+ I K+ + ++ + + V+ Q+++ +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR----------IRIAAETA------------- 200
++G C E E +LV E +L ++ ++ I + + +
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 492
Query: 201 EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQG 240
D+ + N+LL + K+ DFG SK + DE G
Sbjct: 493 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 532
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 159 HRNVVGLLGCCLETEVPL-LVNEFVKL 184
H N+V LL + TE L LV EF+ +
Sbjct: 63 HPNIVKLLD-VIHTENKLYLVFEFLSM 88
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 29/160 (18%)
Query: 109 DRMIGRGGYGTVFLG-----SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVV 163
D+ +G G +GTV G + A+ I K+ + ++ + + V+ Q+++ +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR----------IRIAAETA------------- 200
++G C E E +LV E +L ++ ++ I + + +
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 493
Query: 201 EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQG 240
D+ + N+LL + K+ DFG SK + DE G
Sbjct: 494 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 533
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 29/160 (18%)
Query: 109 DRMIGRGGYGTVFLG-----SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVV 163
D+ +G G +GTV G + A+ I K+ + ++ + + V+ Q+++ +V
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR----------IRIAAETA------------- 200
++G C E E +LV E +L ++ ++ I + + +
Sbjct: 70 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 128
Query: 201 EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQG 240
D+ + N+LL + K+ DFG SK + DE G
Sbjct: 129 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 168
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 109 DRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVLSQINHRNVV 163
+++IG G +G V G L +AIK + Y Q +++ ++ Q +H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR------------------------IRIAAET 199
L G + + +++ E+++ ++ +R + +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 138
Query: 200 AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTL 242
D+ + NIL++ N KV DFG S+++ D T G +
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 181
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 159 HRNVVGLLGCCLETEVPL-LVNEFVKL 184
H N+V LL + TE L LV EF+ +
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFLSM 89
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 33.9 bits (76), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++ G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L++ ++V+ ++W V+I ED + +
Sbjct: 88 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 29/160 (18%)
Query: 109 DRMIGRGGYGTVFLG-----SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVV 163
D+ +G G +GTV G + A+ I K+ + ++ + + V+ Q+++ +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR----------IRIAAETA------------- 200
++G C E E +LV E +L ++ ++ I + + +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 201 EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQG 240
D+ + N+LL + K+ DFG SK + DE G
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 174
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/182 (18%), Positives = 72/182 (39%), Gaps = 45/182 (24%)
Query: 89 DTAKIFTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSR-IVYQ 141
D ++ + + NN + + +G G +G V LG +A+K + +
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 142 SQIEQCINKVVVLSQI-NHRNVVGLLGCCLETEVPLLVNEF------------------- 181
+ E ++++ ++S + H N+V LLG C L++ E+
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 182 -----VKLPTISWEVRIRIAAETAE-------------DIKSINILLDDNYTTKVCDFGA 223
+ T+S + +++ A+ D+ + N+LL + + K+ DFG
Sbjct: 151 DPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 210
Query: 224 SK 225
++
Sbjct: 211 AR 212
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 33.9 bits (76), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 102 ATNNYAYDRM--IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQ 156
AT+ Y R+ +G G YG V+ N+ +AIK+ R+ ++ + I +V +L +
Sbjct: 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKE 89
Query: 157 INHRNVVGL 165
+ HRN++ L
Sbjct: 90 LQHRNIIEL 98
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 110 RMIGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNV 162
+ +G G YG V L + +A+A+K K + I E CINK+ +NH NV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENV 66
Query: 163 VGLLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAET 199
V G E + L E+ + +P + V + T
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 200 AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 30/163 (18%)
Query: 93 IFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDN-KAIAIKKSRIVYQSQIEQCINKV 151
+ G+ ++ ++Y IG G G V L + + +A+K + Q + E N+V
Sbjct: 37 VVDQGDPRLLLDSYVK---IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEV 93
Query: 152 VVLSQINHRNVVGLLGCCLETEVPLLVNEFVK---LPTISWEVRI---RIA--------- 196
V++ H NVV + L E ++ EF++ L I +VR+ +IA
Sbjct: 94 VIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQA 153
Query: 197 -------AETAEDIKSINILLDDNYTTKVCDFG----ASKLVP 228
DIKS +ILL + K+ DFG SK VP
Sbjct: 154 LAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP 196
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/152 (18%), Positives = 66/152 (43%), Gaps = 36/152 (23%)
Query: 110 RMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
+ +G G +G V++G +++ +A+K + S ++ + + ++ + H +V L
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 170 LETEVPLLVNEF-----------------VKLPTISWEVRIRIAAETAE----------- 201
E ++ E+ V LP + I +A+ AE
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERKNYI 132
Query: 202 --DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
D+++ N+L+ ++ K+ DFG ++++ +E
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNE 164
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 72/178 (40%), Gaps = 41/178 (23%)
Query: 89 DTAKIFTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSR-IVYQ 141
D ++ + + NN + + +G G +G V LG +A+K + +
Sbjct: 23 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 82
Query: 142 SQIEQCINKVVVLSQI-NHRNVVGLLGCCLETEVPLLVNEFV------------------ 182
+ E ++++ ++S + H N+V LLG C L++ E+
Sbjct: 83 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 142
Query: 183 KLPTISWEVR--IRIAAETAE-------------DIKSINILLDDNYTTKVCDFGASK 225
K E+R + +++ A+ D+ + N+LL + + K+ DFG ++
Sbjct: 143 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 29/160 (18%)
Query: 109 DRMIGRGGYGTVFLG-----SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVV 163
D+ +G G +GTV G + A+ I K+ + ++ + + V+ Q+++ +V
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR----------IRIAAETA------------- 200
++G C E E +LV E +L ++ ++ I + + +
Sbjct: 90 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 148
Query: 201 EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQG 240
D+ + N+LL + K+ DFG SK + DE G
Sbjct: 149 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 188
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++NH
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 161 NVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA---- 196
N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 70 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 197 -AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 28/160 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAI----AIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLG 167
+G+GG+ F S +D K + + KS ++ Q E+ ++ + + H++VVG G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 168 CCLETEVPLLVNEFVKLPTISWEVRIRIAAETAE-----------------------DIK 204
+ + +V E + ++ + R A E D+K
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 205 SINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
N+ L+++ K+ DFG + V D + T+ GT Y
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNY 183
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 110 RMIGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNV 162
+ +G G YG V L + +A+A+K K + I E CINK+ +NH NV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENV 67
Query: 163 VGLLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAET 199
V G E + L E+ + +P + V + T
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 200 AEDIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 28/157 (17%)
Query: 95 TAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK--KSRIVYQSQIEQCINKV 151
T+ + + NY + IG+G + V L + K +A+K + S +++ +V
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV 64
Query: 152 VVLSQINHRNVVGLLGCCLETEVPL-LVNEFVKLPTI-----------SWEVRIRIAAET 199
+ +NH N+V L +ETE L LV E+ + E R +
Sbjct: 65 RIXKVLNHPNIVKLFE-VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV 123
Query: 200 A------------EDIKSINILLDDNYTTKVCDFGAS 224
+ D+K+ N+LLD + K+ DFG S
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 29/160 (18%)
Query: 109 DRMIGRGGYGTVFLG-----SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVV 163
D+ +G G +GTV G + A+ I K+ + ++ + + V+ Q+++ +V
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR----------IRIAAETA------------- 200
++G C E E +LV E +L ++ ++ I + + +
Sbjct: 82 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 140
Query: 201 EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQG 240
D+ + N+LL + K+ DFG SK + DE G
Sbjct: 141 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 28/154 (18%)
Query: 102 ATNNYAYDRMIGRGGYG-TVFLGSLSDNKAIAIKKSRIVYQS--QIEQCINKVVVLSQIN 158
+ Y + IG G +G + + S D + IK+ I S + E+ +V VL+ +
Sbjct: 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK 81
Query: 159 HRNVVG-------------LLGCCLETEVPLLVNE-----FVKLPTISWEVRIRIAAETA 200
H N+V ++ C ++ +N F + + W V+I +A +
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 201 ED-------IKSINILLDDNYTTKVCDFGASKLV 227
D IKS NI L + T ++ DFG ++++
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 28/160 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAI----AIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLG 167
+G+GG+ F S +D K + + KS ++ Q E+ ++ + + H++VVG G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 168 CCLETEVPLLVNEFVKLPTISWEVRIRIAAETAE-----------------------DIK 204
+ + +V E + ++ + R A E D+K
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 205 SINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
N+ L+++ K+ DFG + V D + T+ GT Y
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNY 183
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 159 HRNVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA-- 196
H N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 197 ---AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 159 HRNVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA-- 196
H N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 197 ---AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 159 HRNVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA-- 196
H N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 63 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 197 ---AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 29/153 (18%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQI 157
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 158 NHRNVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA- 196
NH N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 64 NHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 197 ----AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 159 HRNVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA-- 196
H N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 197 ---AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 159 HRNVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA-- 196
H N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 197 ---AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 28/160 (17%)
Query: 112 IGRGGYGTVFLGSLSDNKAI----AIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLG 167
+G+GG+ F S +D K + + KS ++ Q E+ ++ + + H++VVG G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 168 CCLETEVPLLVNEFVKLPTISWEVRIRIAAETAE-----------------------DIK 204
+ + +V E + ++ + R A E D+K
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 205 SINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
N+ L+++ K+ DFG + V D + T+ GT Y
Sbjct: 149 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNY 187
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 159 HRNVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA-- 196
H N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 197 ---AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++NH
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 161 NVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA---- 196
N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 70 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 197 -AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 159 HRNVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA-- 196
H N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 197 ---AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 159 HRNVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA-- 196
H N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 63 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 197 ---AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 69/182 (37%), Gaps = 45/182 (24%)
Query: 89 DTAKIFTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSR-IVYQ 141
D ++ + + NN + + +G G +G V LG +A+K + +
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 142 SQIEQCINKVVVLSQI-NHRNVVGLLGCCLETEVPLLVNEFV-----------KLPTISW 189
+ E ++++ ++S + H N+V LLG C L++ E+ K +
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 190 EVRIRIAAETA--------------------------EDIKSINILLDDNYTTKVCDFGA 223
+ IA TA D+ + N+LL + + K+ DFG
Sbjct: 151 DPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 210
Query: 224 SK 225
++
Sbjct: 211 AR 212
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 159 HRNVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA-- 196
H N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 197 ---AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 159 HRNVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA-- 196
H N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 64 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 197 ---AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 159 HRNVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA-- 196
H N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 65 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 197 ---AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 72/178 (40%), Gaps = 41/178 (23%)
Query: 89 DTAKIFTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSR-IVYQ 141
D ++ + + NN + + +G G +G V LG +A+K + +
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 142 SQIEQCINKVVVLSQI-NHRNVVGLLGCCLETEVPLLVNEFV------------------ 182
+ E ++++ ++S + H N+V LLG C L++ E+
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 150
Query: 183 KLPTISWEVR--IRIAAETAE-------------DIKSINILLDDNYTTKVCDFGASK 225
K E+R + +++ A+ D+ + N+LL + + K+ DFG ++
Sbjct: 151 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 208
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 159 HRNVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA-- 196
H N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 197 ---AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 159 HRNVVGLLGCCLETEVPL-LVNEFV 182
H N+V LL + TE L LV EF+
Sbjct: 61 HPNIVKLLD-VIHTENKLYLVFEFL 84
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 161 NVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA---- 196
N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 197 -AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 159 HRNVVGLLGCCLETEVPL-LVNEFV 182
H N+V LL + TE L LV EF+
Sbjct: 62 HPNIVKLLD-VIHTENKLYLVFEFL 85
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 68
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 29/150 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 161 NVVGLLGCCLETEVPL-LVNEF----------------VKLPTISWEVRIRIAAET---- 199
N+V LL + TE L LV EF + LP I + + +
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 200 ----AEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++NH
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 161 NVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA---- 196
N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 64 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 197 -AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 161 NVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA---- 196
N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 197 -AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 161 NVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA---- 196
N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 197 -AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 159 HRNVVGLLGCCLETEVPL-LVNEFV 182
H N+V LL + TE L LV EF+
Sbjct: 63 HPNIVKLLD-VIHTENKLYLVFEFL 86
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 67
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 68 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 127
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 128 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 171
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 68
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 161 NVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA---- 196
N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 197 -AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 68
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 29/160 (18%)
Query: 109 DRMIGRGGYGTVFLG-----SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVV 163
D+ +G G +GTV G + A+ I K+ + ++ + + V+ Q+++ +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR----------IRIAAETA------------- 200
++G C E E +LV E +L ++ ++ I + + +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 201 EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQG 240
D+ + N+LL + K+ DFG SK + DE G
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 29/160 (18%)
Query: 109 DRMIGRGGYGTVFLG-----SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVV 163
D+ +G G +GTV G + A+ I K+ + ++ + + V+ Q+++ +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR----------IRIAAETA------------- 200
++G C E E +LV E +L ++ ++ I + + +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 201 EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQG 240
D+ + N+LL + K+ DFG SK + DE G
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 68
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 69
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++ G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 68
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 161 NVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA---- 196
N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 197 -AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 161 NVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA---- 196
N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 197 -AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 69
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 161 NVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA---- 196
N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 197 -AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 69
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 69
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G YG V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 69
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 32/153 (20%)
Query: 112 IGRGGYGTVFLGSLSDNK----AIAIK--KSRIVYQSQ-IEQCINKVVVLSQINHRNVVG 164
+G G +G V G ++A+K K ++ Q + ++ I +V + ++HRN++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVR-----------IRIAAETAE------------ 201
L G L + + V E L ++ +R R A + AE
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 202 -DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+ + N+LL K+ DFG + +P ++
Sbjct: 145 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGS-LSDNKAIAIKKSRIVYQSQIEQCINKVV-----VLSQINHRNVV 163
+++G G +GTV+ G + + + + I + + + NK + V++ +++ +V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 115 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 174
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 175 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 207
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 32/153 (20%)
Query: 112 IGRGGYGTVFLGSLSDNK----AIAIK--KSRIVYQSQ-IEQCINKVVVLSQINHRNVVG 164
+G G +G V G ++A+K K ++ Q + ++ I +V + ++HRN++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVR-----------IRIAAETAE------------ 201
L G L + + V E L ++ +R R A + AE
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 202 -DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+ + N+LL K+ DFG + +P ++
Sbjct: 145 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 29/153 (18%)
Query: 110 RMIGRGGYGTVFLGSLSDNK-----AIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVV 163
+++ G +GTV+ G +AIK+ R + ++ +++ V++ +++ +V
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 164 GLLGCCLETEVPLLVN--------EFVKLPT--------ISWEVRIRIAAETAEDIKSI- 206
LLG CL + V L+ ++V+ ++W V+I ED + +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 207 ------NILLDDNYTTKVCDFGASKLVPIDETQ 233
N+L+ K+ DFG +KL+ +E +
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 111 MIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGC 168
+IG GG+G VF D K I+ R+ Y + E+ +V L++++H N+V GC
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIR--RVKYNN--EKAEREVKALAKLDHVNIVHYNGC 73
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQ-INHRNVVGLLGCC 169
+G G YG V L + +A+A+K + + I K + +++ +NH NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 170 LETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAEDIKSI 206
E + L E+ + +P + V + T DIK
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 133
Query: 207 NILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 32/153 (20%)
Query: 112 IGRGGYGTVFLGSLSDNK----AIAIK--KSRIVYQSQ-IEQCINKVVVLSQINHRNVVG 164
+G G +G V G ++A+K K ++ Q + ++ I +V + ++HRN++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVR-----------IRIAAETAE------------ 201
L G L + + V E L ++ +R R A + AE
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 202 -DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+ + N+LL K+ DFG + +P ++
Sbjct: 139 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 60/154 (38%), Gaps = 32/154 (20%)
Query: 110 RMIGRGGYGTVFLGSLSDNKAI----AIKKSRIVYQSQIEQCINKVVVLSQI-NHRNVVG 164
R+IGRG Y V L L I +KK + I+ + V Q NH +VG
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 165 LLGCCLETEVPLL-VNEFV-------------KLPTIS---WEVRIRIAAE-------TA 200
L C +TE L V E+V KLP + I +A
Sbjct: 86 L-HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 144
Query: 201 EDIKSINILLDDNYTTKVCDFGASK--LVPIDET 232
D+K N+LLD K+ D+G K L P D T
Sbjct: 145 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 178
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 71/163 (43%), Gaps = 39/163 (23%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINH 159
+I + ++ +G G +G V++ + + + +A+K + S +E + + V+ + H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQH 69
Query: 160 RNVVGLLGCCLETEVPL-LVNEFV-----------------KLPTISWEVRIRIAAETAE 201
+V L T+ P+ ++ EF+ LP + I +A+ AE
Sbjct: 70 DKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAE 122
Query: 202 -------------DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
D+++ NIL+ + K+ DFG ++++ +E
Sbjct: 123 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 165
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 32/153 (20%)
Query: 112 IGRGGYGTVFLGSLSDNK----AIAIK--KSRIVYQSQ-IEQCINKVVVLSQINHRNVVG 164
+G G +G V G ++A+K K ++ Q + ++ I +V + ++HRN++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVR-----------IRIAAETAE------------ 201
L G L + + V E L ++ +R R A + AE
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 202 -DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+ + N+LL K+ DFG + +P ++
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 60/154 (38%), Gaps = 32/154 (20%)
Query: 110 RMIGRGGYGTVFLGSLSDNKAI----AIKKSRIVYQSQIEQCINKVVVLSQI-NHRNVVG 164
R+IGRG Y V L L I +KK + I+ + V Q NH +VG
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 165 LLGCCLETEVPLL-VNEFV-------------KLPTIS---WEVRIRIAAE-------TA 200
L C +TE L V E+V KLP + I +A
Sbjct: 71 L-HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 129
Query: 201 EDIKSINILLDDNYTTKVCDFGASK--LVPIDET 232
D+K N+LLD K+ D+G K L P D T
Sbjct: 130 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 163
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 32/153 (20%)
Query: 112 IGRGGYGTVFLGSLSDNK----AIAIK--KSRIVYQSQ-IEQCINKVVVLSQINHRNVVG 164
+G G +G V G ++A+K K ++ Q + ++ I +V + ++HRN++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVR-----------IRIAAETAE------------ 201
L G L + + V E L ++ +R R A + AE
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 202 -DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+ + N+LL K+ DFG + +P ++
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 32/153 (20%)
Query: 112 IGRGGYGTVFLGSLSDNK----AIAIK--KSRIVYQSQ-IEQCINKVVVLSQINHRNVVG 164
+G G +G V G ++A+K K ++ Q + ++ I +V + ++HRN++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVR-----------IRIAAETAE------------ 201
L G L + + V E L ++ +R R A + AE
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 202 -DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+ + N+LL K+ DFG + +P ++
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 60/180 (33%)
Query: 104 NNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIKK--SRIVYQSQIEQCINKVVVLSQINHR 160
+ + +RM G+G +GTV LG S ++AIKK ++++ Q + + VL +H
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL---HHP 79
Query: 161 NVVGL------LG----------------------CCLE------TEVPLLVNEF----- 181
N+V L LG CC P+L+ F
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 182 -----VKLPTISWEVRIRIAAETAEDIKSINILLDD-NYTTKVCDFGASKLVPIDETQLS 235
+ LP+++ R DIK N+L+++ + T K+CDFG++K + E ++
Sbjct: 140 RSIGCLHLPSVNVCHR---------DIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K V Q E + + +
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S++NH+N+V +G L++
Sbjct: 87 IISKLNHQNIVRCIGVSLQS 106
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 69
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV-NEFVKLPTISWEVR 192
++++ +L I H NVV LLG C + PL+V EF K +S +R
Sbjct: 70 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 117
Score = 27.7 bits (60), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 202 DIKSINILLDDNYTTKVCDFGASK 225
D+ + NILL + K+CDFG ++
Sbjct: 216 DLAARNILLSEKNVVKICDFGLAR 239
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 60/154 (38%), Gaps = 32/154 (20%)
Query: 110 RMIGRGGYGTVFLGSLSDNKAI----AIKKSRIVYQSQIEQCINKVVVLSQI-NHRNVVG 164
R+IGRG Y V L L I +KK + I+ + V Q NH +VG
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 165 LLGCCLETEVPLL-VNEFV-------------KLPTIS---WEVRIRIAAE-------TA 200
L C +TE L V E+V KLP + I +A
Sbjct: 118 L-HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 176
Query: 201 EDIKSINILLDDNYTTKVCDFGASK--LVPIDET 232
D+K N+LLD K+ D+G K L P D T
Sbjct: 177 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 210
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 71
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV-NEFVKLPTISWEVR 192
++++ +L I H NVV LLG C + PL+V EF K +S +R
Sbjct: 72 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 119
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 202 DIKSINILLDDNYTTKVCDFGASK 225
D+ + NILL + K+CDFG ++
Sbjct: 218 DLAARNILLSEKNVVKICDFGLAR 241
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 60/154 (38%), Gaps = 32/154 (20%)
Query: 110 RMIGRGGYGTVFLGSLSDNKAI----AIKKSRIVYQSQIEQCINKVVVLSQI-NHRNVVG 164
R+IGRG Y V L L I +KK + I+ + V Q NH +VG
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 165 LLGCCLETEVPLL-VNEFV-------------KLPTIS---WEVRIRIAAE-------TA 200
L C +TE L V E+V KLP + I +A
Sbjct: 75 L-HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 133
Query: 201 EDIKSINILLDDNYTTKVCDFGASK--LVPIDET 232
D+K N+LLD K+ D+G K L P D T
Sbjct: 134 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 167
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 89 DTAKIFTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSR-IVYQ 141
D ++ + + NN + + +G G +G V LG +A+K + +
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 142 SQIEQCINKVVVLSQI-NHRNVVGLLGCCLETEVPLLVNEF 181
+ E ++++ ++S + H N+V LLG C L++ E+
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 89 DTAKIFTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSR-IVYQ 141
D ++ + + NN + + +G G +G V LG +A+K + +
Sbjct: 16 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 75
Query: 142 SQIEQCINKVVVLSQI-NHRNVVGLLGCCLETEVPLLVNEF 181
+ E ++++ ++S + H N+V LLG C L++ E+
Sbjct: 76 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 116
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV-NEFVKLPTISWEVR 192
++++ +L I H NVV LLG C + PL+V EF K +S +R
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 126
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 202 DIKSINILLDDNYTTKVCDFGASK 225
D+ + NILL + K+CDFG ++
Sbjct: 225 DLAARNILLSEKNVVKICDFGLAR 248
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K V Q E + + +
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S++NH+N+V +G L++
Sbjct: 101 IISKLNHQNIVRCIGVSLQS 120
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 109 DRMIGRGGYGTVFLGSLS----DNKAIAIKKSRIVY-QSQIEQCINKVVVLSQINHRNVV 163
+++IG G +G V G L +AIK + Y + Q +++ ++ Q +H NV+
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 164 GLLGCCLETEVPLLVNEFVKLPTISWEVR-----------------IRIAAETAEDIKSI 206
L G ++ +++ EF++ ++ +R I + D+ +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 131
Query: 207 -------NILLDDNYTTKVCDFGASKLVPID 230
NIL++ N KV DFG S+ + D
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDD 162
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 15/87 (17%)
Query: 105 NYAYDR-----MIGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQ-I 157
+Y YD ++G+G YG V+ G LS+ IAIK+ S+ Q +++ + L + +
Sbjct: 18 DYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHKHL 76
Query: 158 NHRNVVGLLGCCLETEVPLLVNEFVKL 184
H+N+V LG E N F+K+
Sbjct: 77 KHKNIVQYLGSFSE-------NGFIKI 96
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 15/87 (17%)
Query: 105 NYAYDR-----MIGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQ-I 157
+Y YD ++G+G YG V+ G LS+ IAIK+ S+ Q +++ + L + +
Sbjct: 4 DYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHKHL 62
Query: 158 NHRNVVGLLGCCLETEVPLLVNEFVKL 184
H+N+V LG E N F+K+
Sbjct: 63 KHKNIVQYLGSFSE-------NGFIKI 82
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 32/153 (20%)
Query: 112 IGRGGYGTVFLGSLSDNK----AIAIK--KSRIVYQSQ-IEQCINKVVVLSQINHRNVVG 164
+G G +G V G ++A+K K ++ Q + ++ I +V + ++HRN++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 165 LLGCCLETEVPLLVNEFVKLPTISWEVR-----------IRIAAETAE------------ 201
L G L + + V E L ++ +R R A + AE
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 202 -DIKSINILLDDNYTTKVCDFGASKLVPIDETQ 233
D+ + N+LL K+ DFG + +P ++
Sbjct: 139 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 48/168 (28%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLSDN---KAIAIKKSRIVYQSQIEQ--CINKVVVLSQI- 157
N+ + +IG G +G V + + AIK+ + Y S+ + ++ VL ++
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLG 83
Query: 158 NHRNVVGLLGCC---------------------------LETEVPLLVNEFVKLPTISWE 190
+H N++ LLG C LET+ P T+S +
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETD-PAFAIANSTASTLSSQ 142
Query: 191 VRIRIAAETAE-------------DIKSINILLDDNYTTKVCDFGASK 225
+ AA+ A D+ + NIL+ +NY K+ DFG S+
Sbjct: 143 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRI-VYQSQIEQ 146
+ A + + + + +GRG +G V + + + +A+K + S+
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 147 CINKVVVLSQINHR-NVVGLLGCCLETEVPLLV-NEFVKLPTISWEVR 192
++++ +L I H NVV LLG C + PL+V EF K +S +R
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 202 DIKSINILLDDNYTTKVCDFGASK 225
D+ + NILL + K+CDFG ++
Sbjct: 223 DLAARNILLSEKNVVKICDFGLAR 246
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 49/191 (25%)
Query: 89 DTAKIFTAGELKIATNNYAYDRMIGRGGYGTVF----LGSLSDNKAIAIKKSRI---VYQ 141
D ++ + + N ++ + +G G +G V G + + A+ + + +
Sbjct: 31 DPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL 90
Query: 142 SQIEQCINKVVVLSQI-NHRNVVGLLGCCLETEVPLLVNEFV------------------ 182
++ E ++++ VLS + NH N+V LLG C L++ E+
Sbjct: 91 TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 150
Query: 183 --KLPTI----------------SWEVRIRIAAETAE-----DIKSINILLDDNYTTKVC 219
P I S++V +A ++ D+ + NILL TK+C
Sbjct: 151 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKIC 210
Query: 220 DFGASKLVPID 230
DFG ++ + D
Sbjct: 211 DFGLARHIKND 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 103 TNNYAYDRMIGRGGYGTVFLGS---LSDNKAIAI-KKSRIVYQSQIEQCINKVVVLSQIN 158
++ Y + +G G YG V L +AI I KKS + S +++V VL Q++
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 159 HRNVVGL 165
H N++ L
Sbjct: 80 HPNIMKL 86
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 48/168 (28%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLSDN---KAIAIKKSRIVYQSQIEQ--CINKVVVLSQI- 157
N+ + +IG G +G V + + AIK+ + Y S+ + ++ VL ++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLG 73
Query: 158 NHRNVVGLLGCC---------------------------LETEVPLLVNEFVKLPTISWE 190
+H N++ LLG C LET+ P T+S +
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETD-PAFAIANSTASTLSSQ 132
Query: 191 VRIRIAAETAE-------------DIKSINILLDDNYTTKVCDFGASK 225
+ AA+ A D+ + NIL+ +NY K+ DFG S+
Sbjct: 133 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 26/159 (16%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQIEQCINKVVVL-SQINHRNVVGLLGCC 169
+G G YG V L + +A+A+K + + I K + + + +NH NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 170 LETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAEDIKSI 206
E + L E+ + +P + V + T DIK
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 207 NILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 34/148 (22%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQIE--QCINKVVVLSQINHRNVVG 164
R +G G YG+V + L + +A+KK +QS I + ++ +L + H NV+G
Sbjct: 34 RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 165 LL-----GCCLE--TEVPLL-------VNEFVKLPTISWE---------VR----IRIAA 197
LL +E +EV L+ +N VK +S E +R I A
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 198 ETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+ ++++ ++ DFG ++
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 34/148 (22%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQIE--QCINKVVVLSQINHRNVVG 164
R +G G YG+V + L + +A+KK +QS I + ++ +L + H NV+G
Sbjct: 34 RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 165 LL-----GCCLE--TEVPLL-------VNEFVKLPTISWE---------VR----IRIAA 197
LL +E +EV L+ +N VK +S E +R I A
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 198 ETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+ ++++ ++ DFG ++
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 103 TNNYAYDRMIGRGGYGTVFLGS---LSDNKAIAI-KKSRIVYQSQIEQCINKVVVLSQIN 158
++ Y + +G G YG V L +AI I KKS + S +++V VL Q++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 159 HRNVVGL 165
H N++ L
Sbjct: 63 HPNIMKL 69
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
D+ + NIL++ K+ DFG +KL+P+D+
Sbjct: 152 DLAARNILVESEAHVKIADFGLAKLLPLDK 181
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLS 155
IA + +R++G G +G V+ G +++K +A+K + E+ +++ V++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEF 181
++H ++V L+G +E E ++ E
Sbjct: 65 NLDHPHIVKLIG-IIEEEPTWIIMEL 89
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
D+ + NIL++ K+ DFG +KL+P+D+
Sbjct: 139 DLAARNILVESEAHVKIADFGLAKLLPLDK 168
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLS 155
IA + +R++G G +G V+ G +++K +A+K + E+ +++ V++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEF 181
++H ++V L+G +E E ++ E
Sbjct: 69 NLDHPHIVKLIG-IIEEEPTWIIMEL 93
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 49/191 (25%)
Query: 89 DTAKIFTAGELKIATNNYAYDRMIGRGGYGTVF----LGSLSDNKAIAIKKSRI---VYQ 141
D ++ + + N ++ + +G G +G V G + + A+ + + +
Sbjct: 8 DPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL 67
Query: 142 SQIEQCINKVVVLSQI-NHRNVVGLLGCCLETEVPLLVNEFV------------------ 182
++ E ++++ VLS + NH N+V LLG C L++ E+
Sbjct: 68 TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 127
Query: 183 --KLPTI----------------SWEVRIRIAAETAE-----DIKSINILLDDNYTTKVC 219
P I S++V +A ++ D+ + NILL TK+C
Sbjct: 128 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKIC 187
Query: 220 DFGASKLVPID 230
DFG ++ + D
Sbjct: 188 DFGLARDIKND 198
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLGSLSDNKA----IAIKK-SRIVYQSQIEQCINKVVVLS 155
IA + +R++G G +G V+ G +++K +A+K + E+ +++ V++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 156 QINHRNVVGLLGCCLETEVPLLVNEF 181
++H ++V L+G +E E ++ E
Sbjct: 81 NLDHPHIVKLIG-IIEEEPTWIIMEL 105
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
D+ + NIL++ K+ DFG +KL+P+D+
Sbjct: 140 DLAARNILVESEAHVKIADFGLAKLLPLDK 169
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 62/144 (43%), Gaps = 28/144 (19%)
Query: 110 RMIGRGGYGTV----FLGSLSDNKAIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVVG 164
R IG G +G V ++ + A+AIK + + E+ + + + + Q +H ++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 165 LLGCCLETEVPLLVN------------------EFVKLPTISWEVRIRIAAETAE----- 201
L+G E V +++ + L ++++ +A ++
Sbjct: 76 LIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 202 DIKSINILLDDNYTTKVCDFGASK 225
DI + N+L+ N K+ DFG S+
Sbjct: 136 DIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K V Q E + + +
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S+ NH+N+V +G L++
Sbjct: 93 IISKFNHQNIVRCIGVSLQS 112
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K V Q E + + +
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S+ NH+N+V +G L++
Sbjct: 87 IISKFNHQNIVRCIGVSLQS 106
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K V Q E + + +
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S+ NH+N+V +G L++
Sbjct: 113 IISKFNHQNIVRCIGVSLQS 132
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K V Q E + + +
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S+ NH+N+V +G L++
Sbjct: 103 IISKFNHQNIVRCIGVSLQS 122
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K V Q E + + +
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S+ NH+N+V +G L++
Sbjct: 127 IISKFNHQNIVRCIGVSLQS 146
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 102 ATNNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQIN 158
+ N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 159 HRNVVGLL 166
H N+V LL
Sbjct: 64 HPNIVKLL 71
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K V Q E + + +
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S+ NH+N+V +G L++
Sbjct: 87 IISKFNHQNIVRCIGVSLQS 106
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K V Q E + + +
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S+ NH+N+V +G L++
Sbjct: 104 IISKFNHQNIVRCIGVSLQS 123
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 39/176 (22%)
Query: 105 NYAYDRMIGRGGYGTVFLG---SLSDNKAIAIKKSRIVYQSQIEQCINK-VVVLSQINHR 160
NY + +G G +G V L + A+ I +++ +S ++ I + + L + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 161 NVVGLLGCCLETEVPLLVNEFVKLPTISWEV-RIRIAAETAE------------------ 201
+++ L + ++V E+ + V R +++ + A
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 202 ---DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGYYLHTSQGTLN 254
D+K N+LLD++ K+ DFG S ++ T G +L TS G+ N
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIM-------------TDGNFLKTSCGSPN 177
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 39/176 (22%)
Query: 105 NYAYDRMIGRGGYGTVFLG---SLSDNKAIAIKKSRIVYQSQIEQCINK-VVVLSQINHR 160
NY + +G G +G V L + A+ I +++ +S ++ I + + L + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 161 NVVGLLGCCLETEVPLLVNEFVKLPTISWEV-RIRIAAETAE------------------ 201
+++ L + ++V E+ + V R +++ + A
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 202 ---DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGYYLHTSQGTLN 254
D+K N+LLD++ K+ DFG S ++ T G +L TS G+ N
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIM-------------TDGNFLKTSCGSPN 176
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
D+ + NIL++ K+ DFG +KL+P+D+
Sbjct: 136 DLAARNILVESEAHVKIADFGLAKLLPLDK 165
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 42/179 (23%)
Query: 84 RSGSSDTAKIFTAGELKIATNNYAYD--RMIGRGGYGTVFLGSLSDN-KAIAIKKSRIVY 140
+ GS T + T G+ +Y ++IG G +G V+ L D+ + +AIKK ++
Sbjct: 11 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQ 68
Query: 141 QSQIEQCINKVVVLSQINHRNVVGL---------------LGCCLETEVPLLVNEFVK-- 183
+ + ++ ++ +++H N+V L L L+ VP V +
Sbjct: 69 DKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHY 125
Query: 184 ------LPTISWEVR----------IRIAAETAEDIKSINILLD-DNYTTKVCDFGASK 225
LP I ++ I DIK N+LLD D K+CDFG++K
Sbjct: 126 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 184
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+KK R+ +++ I ++ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 161 NVVGLL 166
N+V LL
Sbjct: 62 NIVKLL 67
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K V Q E + + +
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S+ NH+N+V +G L++
Sbjct: 78 IISKFNHQNIVRCIGVSLQS 97
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 44/156 (28%)
Query: 110 RMIGRGGYGTVFL----------GSLSDNKAI---AIKKSRIVYQSQIEQCINKVVVLSQ 156
R +G G +G V L G + KA+ A + R ++ +I+ +L
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEID-------ILRT 89
Query: 157 INHRNVVGLLGCCLETEVP--LLVNEFVKL---------PTISWEVRIRIAAETAE---- 201
+ H +++ GCC + LV E+V L +I + A + E
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAY 149
Query: 202 ---------DIKSINILLDDNYTTKVCDFGASKLVP 228
D+ + N+LLD++ K+ DFG +K VP
Sbjct: 150 LHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 42/179 (23%)
Query: 84 RSGSSDTAKIFTAGELKIATNNYAYD--RMIGRGGYGTVFLGSLSDN-KAIAIKKSRIVY 140
+ GS T + T G+ +Y ++IG G +G V+ L D+ + +AIKK ++
Sbjct: 17 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQ 74
Query: 141 QSQIEQCINKVVVLSQINHRNVVGL---------------LGCCLETEVPLLVNEFVK-- 183
+ + ++ ++ +++H N+V L L L+ VP V +
Sbjct: 75 DKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHY 131
Query: 184 ------LPTISWEVR----------IRIAAETAEDIKSINILLD-DNYTTKVCDFGASK 225
LP I ++ I DIK N+LLD D K+CDFG++K
Sbjct: 132 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 190
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 49/191 (25%)
Query: 89 DTAKIFTAGELKIATNNYAYDRMIGRGGYGTVF----LGSLSDNKAIAIKKSRI---VYQ 141
D ++ + + N ++ + +G G +G V G + + A+ + + +
Sbjct: 31 DPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL 90
Query: 142 SQIEQCINKVVVLSQI-NHRNVVGLLGCCLETEVPLLVNEFV------------------ 182
++ E ++++ VLS + NH N+V LLG C L++ E+
Sbjct: 91 TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 150
Query: 183 --KLPTI----------------SWEVRIRIAAETAE-----DIKSINILLDDNYTTKVC 219
P I S++V +A ++ D+ + NILL TK+C
Sbjct: 151 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKIC 210
Query: 220 DFGASKLVPID 230
DFG ++ + D
Sbjct: 211 DFGLARDIKND 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 49/191 (25%)
Query: 89 DTAKIFTAGELKIATNNYAYDRMIGRGGYGTVF----LGSLSDNKAIAIKKSRI---VYQ 141
D ++ + + N ++ + +G G +G V G + + A+ + + +
Sbjct: 26 DPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL 85
Query: 142 SQIEQCINKVVVLSQI-NHRNVVGLLGCCLETEVPLLVNEFV------------------ 182
++ E ++++ VLS + NH N+V LLG C L++ E+
Sbjct: 86 TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 145
Query: 183 --KLPTI----------------SWEVRIRIAAETAE-----DIKSINILLDDNYTTKVC 219
P I S++V +A ++ D+ + NILL TK+C
Sbjct: 146 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKIC 205
Query: 220 DFGASKLVPID 230
DFG ++ + D
Sbjct: 206 DFGLARDIKND 216
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 42/179 (23%)
Query: 84 RSGSSDTAKIFTAGELKIATNNYAYD--RMIGRGGYGTVFLGSLSDN-KAIAIKKSRIVY 140
+ GS T + T G+ +Y ++IG G +G V+ L D+ + +AIKK ++
Sbjct: 10 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQ 67
Query: 141 QSQIEQCINKVVVLSQINHRNVVGL---------------LGCCLETEVPLLVNEFVK-- 183
+ + ++ ++ +++H N+V L L L+ VP V +
Sbjct: 68 DKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHY 124
Query: 184 ------LPTISWEVR----------IRIAAETAEDIKSINILLD-DNYTTKVCDFGASK 225
LP I ++ I DIK N+LLD D K+CDFG++K
Sbjct: 125 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K V Q E + + +
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S+ NH+N+V +G L++
Sbjct: 101 IISKFNHQNIVRCIGVSLQS 120
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K V Q E + + +
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S+ NH+N+V +G L++
Sbjct: 86 IISKFNHQNIVRCIGVSLQS 105
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK------AIAIKKSRIVYQSQIE-QCINKVV 152
++ N R +G G +G V+ G +S +A+K V Q E + + +
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 153 VLSQINHRNVVGLLGCCLET 172
++S+ NH+N+V +G L++
Sbjct: 86 IISKFNHQNIVRCIGVSLQS 105
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 39/176 (22%)
Query: 105 NYAYDRMIGRGGYGTVFLG---SLSDNKAIAIKKSRIVYQSQIEQCINK-VVVLSQINHR 160
NY + +G G +G V L + A+ I +++ +S ++ I + + L + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 161 NVVGLLGCCLETEVPLLVNEFVKLPTISWEV-RIRIAAETAE------------------ 201
+++ L + ++V E+ + V R +++ + A
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 202 ---DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGYYLHTSQGTLN 254
D+K N+LLD++ K+ DFG S ++ T G +L TS G+ N
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIM-------------TDGNFLKTSCGSPN 171
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 42/179 (23%)
Query: 84 RSGSSDTAKIFTAGELKIATNNYAYD--RMIGRGGYGTVFLGSLSDN-KAIAIKKSRIVY 140
+ GS T + T G+ +Y ++IG G +G V+ L D+ + +AIKK ++
Sbjct: 10 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQ 67
Query: 141 QSQIEQCINKVVVLSQINHRNVVGL---------------LGCCLETEVPLLVNEFVK-- 183
+ + ++ ++ +++H N+V L L L+ VP V +
Sbjct: 68 DKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHY 124
Query: 184 ------LPTISWEVR----------IRIAAETAEDIKSINILLD-DNYTTKVCDFGASK 225
LP I ++ I DIK N+LLD D K+CDFG++K
Sbjct: 125 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 27/146 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAI----AIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLG 167
+G+GG+ F S +D K + + KS ++ Q E+ ++ + + H++VVG G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 168 CCLETEVPLLVNEFVKLPTISWEVRIRIAAETAE-----------------------DIK 204
+ + +V E + ++ + R A E D+K
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 205 SINILLDDNYTTKVCDFGASKLVPID 230
N+ L+++ K+ DFG + V D
Sbjct: 143 LGNLFLNEDLEVKIGDFGLATKVEYD 168
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 46/150 (30%)
Query: 113 GRGGYGTVFLGSLSDNKAIAIK----KSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGC 168
RG +G V+ L N+ +A+K + + +Q++ E V L + H N++ +G
Sbjct: 33 ARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYE-----VYSLPGMKHENILQFIGA 86
Query: 169 -----CLETEVPLL--------VNEFVKLPTISWEVRIRIAAETAE-------------- 201
++ ++ L+ +++F+K +SW IA A
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 202 ---------DIKSINILLDDNYTTKVCDFG 222
DIKS N+LL +N T + DFG
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFG 176
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 42/179 (23%)
Query: 84 RSGSSDTAKIFTAGELKIATNNYAYD--RMIGRGGYGTVFLGSLSDN-KAIAIKKSRIVY 140
+ GS T + T G+ +Y ++IG G +G V+ L D+ + +AIKK ++
Sbjct: 6 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQ 63
Query: 141 QSQIEQCINKVVVLSQINHRNVVGL---------------LGCCLETEVPLLVNEFVK-- 183
+ + ++ ++ +++H N+V L L L+ VP V +
Sbjct: 64 DKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHY 120
Query: 184 ------LPTISWEVR----------IRIAAETAEDIKSINILLD-DNYTTKVCDFGASK 225
LP I ++ I DIK N+LLD D K+CDFG++K
Sbjct: 121 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 179
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 39/176 (22%)
Query: 105 NYAYDRMIGRGGYGTVFLG---SLSDNKAIAIKKSRIVYQSQIEQCINK-VVVLSQINHR 160
NY + +G G +G V L + A+ I +++ +S ++ I + + L + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 161 NVVGLLGCCLETEVPLLVNEFVKLPTISWEV-RIRIAAETAE------------------ 201
+++ L + ++V E+ + V R +++ + A
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 202 ---DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGYYLHTSQGTLN 254
D+K N+LLD++ K+ DFG S ++ T G +L TS G+ N
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIM-------------TDGNFLKTSCGSPN 167
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 34/148 (22%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQIE--QCINKVVVLSQINHRNVVG 164
R +G G YG+V + L + +A+KK +QS I + ++ +L + H NV+G
Sbjct: 26 RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 83
Query: 165 LL-----GCCLE--TEVPLL-------VNEFVKLPTISWE---------VR----IRIAA 197
LL +E +EV L+ +N VK +S E +R I A
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 143
Query: 198 ETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+ ++++ ++ DFG ++
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 49/191 (25%)
Query: 89 DTAKIFTAGELKIATNNYAYDRMIGRGGYGTVF----LGSLSDNKAIAIKKSRI---VYQ 141
D ++ + + N ++ + +G G +G V G + + A+ + + +
Sbjct: 24 DPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL 83
Query: 142 SQIEQCINKVVVLSQI-NHRNVVGLLGCCLETEVPLLVNEFV------------------ 182
++ E ++++ VLS + NH N+V LLG C L++ E+
Sbjct: 84 TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 143
Query: 183 --KLPTI----------------SWEVRIRIAAETAE-----DIKSINILLDDNYTTKVC 219
P I S++V +A ++ D+ + NILL TK+C
Sbjct: 144 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKIC 203
Query: 220 DFGASKLVPID 230
DFG ++ + D
Sbjct: 204 DFGLARDIKND 214
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 42/179 (23%)
Query: 84 RSGSSDTAKIFTAGELKIATNNYAYD--RMIGRGGYGTVFLGSLSDN-KAIAIKKSRIVY 140
+ GS T + T G+ +Y ++IG G +G V+ L D+ + +AIKK ++
Sbjct: 77 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQ 134
Query: 141 QSQIEQCINKVVVLSQINHRNVVGL---------------LGCCLETEVPLLVNEFVK-- 183
+ + ++ ++ +++H N+V L L L+ VP V +
Sbjct: 135 DKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHY 191
Query: 184 ------LPTISWEVR----------IRIAAETAEDIKSINILLD-DNYTTKVCDFGASK 225
LP I ++ I DIK N+LLD D K+CDFG++K
Sbjct: 192 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 250
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 42/179 (23%)
Query: 84 RSGSSDTAKIFTAGELKIATNNYAYD--RMIGRGGYGTVFLGSLSDN-KAIAIKKSRIVY 140
+ GS T + T G+ +Y ++IG G +G V+ L D+ + +AIKK ++
Sbjct: 36 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQ 93
Query: 141 QSQIEQCINKVVVLSQINHRNVVGL---------------LGCCLETEVPLLVNEFVK-- 183
+ + ++ ++ +++H N+V L L L+ VP V +
Sbjct: 94 DKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHY 150
Query: 184 ------LPTISWEVR----------IRIAAETAEDIKSINILLD-DNYTTKVCDFGASK 225
LP I ++ I DIK N+LLD D K+CDFG++K
Sbjct: 151 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 209
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 42/179 (23%)
Query: 84 RSGSSDTAKIFTAGELKIATNNYAYD--RMIGRGGYGTVFLGSLSDN-KAIAIKKSRIVY 140
+ GS T + T G+ +Y ++IG G +G V+ L D+ + +AIKK ++
Sbjct: 32 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQ 89
Query: 141 QSQIEQCINKVVVLSQINHRNVVGL---------------LGCCLETEVPLLVNEFVK-- 183
+ + ++ ++ +++H N+V L L L+ VP V +
Sbjct: 90 DKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHY 146
Query: 184 ------LPTISWEVR----------IRIAAETAEDIKSINILLD-DNYTTKVCDFGASK 225
LP I ++ I DIK N+LLD D K+CDFG++K
Sbjct: 147 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 110 RMIGRGGYGTVFLGSLSD-NKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVV 163
+ +G GG G VF +D +K +AIKK + ++ + ++ ++ +++H N+V
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 42/179 (23%)
Query: 84 RSGSSDTAKIFTAGELKIATNNYAYD--RMIGRGGYGTVFLGSLSDN-KAIAIKKSRIVY 140
+ GS T + T G+ +Y ++IG G +G V+ L D+ + +AIKK ++
Sbjct: 26 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQ 83
Query: 141 QSQIEQCINKVVVLSQINHRNVVGL---------------LGCCLETEVPLLVNEFVK-- 183
+ + ++ ++ +++H N+V L L L+ VP V +
Sbjct: 84 DKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHY 140
Query: 184 ------LPTISWEVR----------IRIAAETAEDIKSINILLD-DNYTTKVCDFGASK 225
LP I ++ I DIK N+LLD D K+CDFG++K
Sbjct: 141 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 199
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 42/179 (23%)
Query: 84 RSGSSDTAKIFTAGELKIATNNYAYD--RMIGRGGYGTVFLGSLSDN-KAIAIKKSRIVY 140
+ GS T + T G+ +Y ++IG G +G V+ L D+ + +AIKK ++
Sbjct: 34 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQ 91
Query: 141 QSQIEQCINKVVVLSQINHRNVVGL---------------LGCCLETEVPLLVNEFVK-- 183
+ + ++ ++ +++H N+V L L L+ VP V +
Sbjct: 92 DKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHY 148
Query: 184 ------LPTISWEVR----------IRIAAETAEDIKSINILLD-DNYTTKVCDFGASK 225
LP I ++ I DIK N+LLD D K+CDFG++K
Sbjct: 149 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 207
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 33/147 (22%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 30 KPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 165 LLGC-----CLE----------------TEVPLLVNEFVKLPTISWEVRIRI-----AAE 198
LL LE ++V + + ++ + +++ + I A
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGI 147
Query: 199 TAEDIKSINILLDDNYTTKVCDFGASK 225
D+K NI++ + T K+ DFG ++
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 27/146 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAI----AIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLG 167
+G+GG+ F S +D K + + KS ++ Q E+ ++ + + H++VVG G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 168 CCLETEVPLLVNEFVKLPTISWEVRIRIAAETAE-----------------------DIK 204
+ + +V E + ++ + R A E D+K
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 205 SINILLDDNYTTKVCDFGASKLVPID 230
N+ L+++ K+ DFG + V D
Sbjct: 169 LGNLFLNEDLEVKIGDFGLATKVEYD 194
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 42/179 (23%)
Query: 84 RSGSSDTAKIFTAGELKIATNNYAYD--RMIGRGGYGTVFLGSLSDN-KAIAIKKSRIVY 140
+ GS T + T G+ +Y ++IG G +G V+ L D+ + +AIKK ++
Sbjct: 32 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQ 89
Query: 141 QSQIEQCINKVVVLSQINHRNVVGL---------------LGCCLETEVPLLVNEFVK-- 183
+ + ++ ++ +++H N+V L L L+ VP V +
Sbjct: 90 DKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHY 146
Query: 184 ------LPTISWEVR----------IRIAAETAEDIKSINILLD-DNYTTKVCDFGASK 225
LP I ++ I DIK N+LLD D K+CDFG++K
Sbjct: 147 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 27/146 (18%)
Query: 112 IGRGGYGTVFLGSLSDNKAI----AIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLG 167
+G+GG+ F S +D K + + KS ++ Q E+ ++ + + H++VVG G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 168 CCLETEVPLLVNEFVKLPTISWEVRIRIAAETAE-----------------------DIK 204
+ + +V E + ++ + R A E D+K
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 205 SINILLDDNYTTKVCDFGASKLVPID 230
N+ L+++ K+ DFG + V D
Sbjct: 167 LGNLFLNEDLEVKIGDFGLATKVEYD 192
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 99 LKIATNNYAYDRMIGRGGYGTVFLGSLSDN-KAIAIK---KSRIVYQSQIEQCINKVVVL 154
+ + N+++ R+IGRGG+G V+ +D K A+K K RI + +N+ ++L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 155 SQIN 158
S ++
Sbjct: 244 SLVS 247
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 99 LKIATNNYAYDRMIGRGGYGTVFLGSLSDN-KAIAIK---KSRIVYQSQIEQCINKVVVL 154
+ + N+++ R+IGRGG+G V+ +D K A+K K RI + +N+ ++L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 155 SQIN 158
S ++
Sbjct: 244 SLVS 247
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 42/177 (23%)
Query: 86 GSSDTAKIFTAGELKIATNNYAYD--RMIGRGGYGTVFLGSLSDN-KAIAIKKSRIVYQS 142
GS T + T G+ +Y ++IG G +G V+ L D+ + +AIKK ++
Sbjct: 4 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDK 61
Query: 143 QIEQCINKVVVLSQINHRNVVGL---------------LGCCLETEVPLLVNEFVK---- 183
+ + ++ ++ +++H N+V L L L+ VP V +
Sbjct: 62 RFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHYSR 118
Query: 184 ----LPTISWEVR----------IRIAAETAEDIKSINILLD-DNYTTKVCDFGASK 225
LP I ++ I DIK N+LLD D K+CDFG++K
Sbjct: 119 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 175
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NILLDDN ++ DFG S
Sbjct: 225 DLKPENILLDDNMQIRLSDFGFS 247
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 32/146 (21%)
Query: 111 MIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQI-NHRNVVGLLGCC 169
++G G YG V+ G +A K V + E+ ++ +L + +HRN+ G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 170 LETEVP------LLVNEF------------VKLPTISWEVRIRIAAET------------ 199
++ P LV EF K T+ E I E
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV 150
Query: 200 -AEDIKSINILLDDNYTTKVCDFGAS 224
DIK N+LL +N K+ DFG S
Sbjct: 151 IHRDIKGQNVLLTENAEVKLVDFGVS 176
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 99 LKIATNNYAYDRMIGRGGYGTVFLGSLSDN-KAIAIK---KSRIVYQSQIEQCINKVVVL 154
+ + N+++ R+IGRGG+G V+ +D K A+K K RI + +N+ ++L
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 155 SQIN 158
S ++
Sbjct: 243 SLVS 246
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 33/147 (22%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 165 LLGC-----CLE----------------TEVPLLVNEFVKLPTISWEVRIRI-----AAE 198
LL LE ++V + + ++ + +++ + I A
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGI 147
Query: 199 TAEDIKSINILLDDNYTTKVCDFGASK 225
D+K NI++ + T K+ DFG ++
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 99 LKIATNNYAYDRMIGRGGYGTVFLGSLSDN-KAIAIK---KSRIVYQSQIEQCINKVVVL 154
+ + N+++ R+IGRGG+G V+ +D K A+K K RI + +N+ ++L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 155 SQIN 158
S ++
Sbjct: 244 SLVS 247
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
D+K NILLDD+ ++ D G + VP E Q GT+GY
Sbjct: 311 DLKPENILLDDHGHIRISDLGLAVHVP--EGQTIKGRVGTVGY 351
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
D+K NILLDD+ ++ D G + VP E Q GT+GY
Sbjct: 311 DLKPENILLDDHGHIRISDLGLAVHVP--EGQTIKGRVGTVGY 351
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDET 232
D+K N+L++ N KVCDFG +++ IDE+
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARI--IDES 165
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 33/147 (22%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 165 LLGC-----CLE----------------TEVPLLVNEFVKLPTISWEVRIRI-----AAE 198
LL LE ++V + + ++ + +++ + I A
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGI 147
Query: 199 TAEDIKSINILLDDNYTTKVCDFGASK 225
D+K NI++ + T K+ DFG ++
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 112 IGRGGYGTVFLGSLSD-NKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHRNVVGL 165
IG G YGTVF + ++ +A+K+ R+ + + ++ +L ++ H+N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDET 232
D+K N+L++ N KVCDFG +++ IDE+
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARI--IDES 165
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 28/167 (16%)
Query: 87 SSDTAKIFTAGELKIATNNYAYDRMIGRGGYGTV----FLGSLSDNKAIAIKKSRIVYQS 142
DT + + + +I R IG G +G V ++ + A+AIK +
Sbjct: 373 EEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD 432
Query: 143 QI-EQCINKVVVLSQINHRNVVGLLGCCLETEVPLLVN--------EFVKLPTISWEV-- 191
+ E+ + + + + Q +H ++V L+G E V +++ F+++ S ++
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLAS 492
Query: 192 ------RIRIAAETAE-------DIKSINILLDDNYTTKVCDFGASK 225
++ A E DI + N+L+ K+ DFG S+
Sbjct: 493 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR 539
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDET 232
D+K N+L++ N KVCDFG +++ IDE+
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARI--IDES 165
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG V S D + +AIKK +QS++ ++ ++ +L + H NV+GLL
Sbjct: 33 VGSGAYGAVC--SAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 167 GCCLETE 173
E
Sbjct: 91 DVFTPDE 97
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 29/152 (19%)
Query: 109 DRMIGRGGYGTVFLGSLSDNKA---IAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVG 164
D +G G +G+V G K +AIK + ++ E+ + + ++ Q+++ +V
Sbjct: 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 165 LLGCCLETEVPLLVNEFVK-------LPTISWEVRIRIAAE-----------------TA 200
L+G C + E +LV E L E+ + AE
Sbjct: 75 LIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 201 EDIKSINILLDDNYTTKVCDFGASKLVPIDET 232
D+ + N+LL + + K+ DFG SK + D++
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDS 165
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+ K R+ +++ I ++ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 161 NVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA---- 196
N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 197 -AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHR 160
N+ IG G YG V+ + +A+ K R+ +++ I ++ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 161 NVVGLLGCCLETEVPL-LVNEF----------------VKLPTIS---WEVRIRIA---- 196
N+V LL + TE L LV EF + LP I +++ +A
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 197 -AETAEDIKSINILLDDNYTTKVCDFGASK 225
D+K N+L++ K+ DFG ++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NILLD+ K+CDFG S
Sbjct: 150 DVKPSNILLDERGQIKLCDFGIS 172
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 112 IGRGGYGTVFLGSLSD-NKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHRNVVGL 165
IG G YGTVF + ++ +A+K+ R+ + + ++ +L ++ H+N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 67/155 (43%), Gaps = 33/155 (21%)
Query: 103 TNNYAYDRMIGRGGYGTVFLG-SLSDNKAIA---IKKSRIVYQSQIE-----QCINKVVV 153
+ Y+ +G G +G V+ NK + IKK +++ IE + ++ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 154 LSQINHRNVV---------GLLGCCLET-----EVPLLVNEFVKL--PTISWEVR----- 192
LS++ H N++ G +E ++ ++ +L P S+ R
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSA 142
Query: 193 ---IRIAAETAEDIKSINILLDDNYTTKVCDFGAS 224
+R+ DIK NI++ +++T K+ DFG++
Sbjct: 143 VGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 69/166 (41%), Gaps = 28/166 (16%)
Query: 97 GELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQ 156
G +++ + +G G +G V LG +A+K + S+ ++ + + +
Sbjct: 1 GHMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMK 59
Query: 157 INHRNVVGLLGCCLETEVPL-LVNEFVK---------------LPTISWEVRIRIAAETA 200
++H +V G C E P+ +V E++ P+ E+ + A
Sbjct: 60 LSHPKLVKFYGVC-SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA 118
Query: 201 ---------EDIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTM 237
D+ + N L+D + KV DFG ++ V +D+ +S++
Sbjct: 119 FLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSV 163
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 165 LLGC 168
LL
Sbjct: 88 LLNV 91
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 37 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 89
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 9 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 61
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 9 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 61
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 22 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 74
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 29 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 81
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 60/146 (41%), Gaps = 32/146 (21%)
Query: 112 IGRGGYGTVFLGSLSDN---KAIAIKK-SRIVYQSQIEQCINKVVVLSQINHRNVVGLLG 167
IG G YG V S D+ +AIKK S +Q+ ++ + ++ +L + H NV+G+
Sbjct: 51 IGEGAYGMV--SSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 168 CCLETEVPLLVNEFVKLPTISWEV--------------------------RIRIAAETAE 201
+ + + + ++ + ++ I A
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHR 168
Query: 202 DIKSINILLDDNYTTKVCDFGASKLV 227
D+K N+L++ K+CDFG +++
Sbjct: 169 DLKPSNLLINTTCDLKICDFGLARIA 194
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 10 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 62
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 10 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 62
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 10 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 62
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 23 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 75
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 23 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 75
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 42 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 94
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 22 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 74
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 22 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 74
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 23 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 75
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 23 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 75
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 22 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 74
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 TAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
K+ E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 37 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 89
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 66/176 (37%), Gaps = 54/176 (30%)
Query: 104 NNYAYDRMIGRGGYGTVF------LGSLSDNKAIAIKKSRIVYQSQIEQCINK-VVVLSQ 156
NN Y R IG G +G VF L +A+K + + ++ + ++++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 157 INHRNVVGLLGCCLETEVPLL---------VNEFVK------------------------ 183
++ N+V LLG C + L +NEF++
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 184 -LPTISWEVRIRIAAETA-------------EDIKSINILLDDNYTTKVCDFGASK 225
P +S ++ IA + A D+ + N L+ +N K+ DFG S+
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 202 DIKSINILLD-DNYTTKVCDFGASK 225
DIK N+LLD D K+CDFG++K
Sbjct: 147 DIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 202 DIKSINILLD-DNYTTKVCDFGASK 225
DIK N+LLD D K+CDFG++K
Sbjct: 147 DIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHRNVVGL 165
IG G YG V+ + + A+KK R+ + + I ++ +L ++ H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHRNVVGL 165
IG G YG V+ + + A+KK R+ + + I ++ +L ++ H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 202 DIKSINILLD-DNYTTKVCDFGASK 225
DIK N+LLD D K+CDFG++K
Sbjct: 147 DIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 202 DIKSINILLD-DNYTTKVCDFGASK 225
DIK N+LLD D K+CDFG++K
Sbjct: 148 DIKPQNLLLDPDTAVLKLCDFGSAK 172
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 202 DIKSINILLD-DNYTTKVCDFGASK 225
DIK N+LLD D K+CDFG++K
Sbjct: 147 DIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 202 DIKSINILLD-DNYTTKVCDFGASK 225
DIK N+LLD D K+CDFG++K
Sbjct: 147 DIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 202 DIKSINILLD-DNYTTKVCDFGASK 225
DIK N+LLD D K+CDFG++K
Sbjct: 147 DIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 30.8 bits (68), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 112 IGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQINHRNVVGL 165
IG G YG V+ + + A+KK R+ + + I ++ +L ++ H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 202 DIKSINILLD-DNYTTKVCDFGASK 225
DIK N+LLD D K+CDFG++K
Sbjct: 152 DIKPQNLLLDPDTAVLKLCDFGSAK 176
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 202 DIKSINILLD-DNYTTKVCDFGASK 225
DIK N+LLD D K+CDFG++K
Sbjct: 147 DIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 37/189 (19%)
Query: 85 SGSSDTAKIFTAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQI 144
SS T I T +++ R +G+G +G V+L + K+ I +++++SQI
Sbjct: 7 ENSSGTPDILTR---HFTIDDFEIGRPLGKGKFGNVYLAR--EKKSHFIVALKVLFKSQI 61
Query: 145 E------QCINKVVVLSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVR------ 192
E Q ++ + + ++H N++ L + L+ E+ + E++
Sbjct: 62 EKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFD 121
Query: 193 ----IRIAAETAE-------------DIKSINILLDDNYTTKVCDFGASKLVPIDETQLS 235
I E A+ DIK N+LL K+ DFG S P +
Sbjct: 122 EQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAP--SLRRK 179
Query: 236 TMVQGTLGY 244
TM GTL Y
Sbjct: 180 TMC-GTLDY 187
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 30.8 bits (68), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 48/168 (28%)
Query: 104 NNYAYDRMIGRGGYGTVFLGSLSDN---KAIAIKKSRIVYQSQIEQ--CINKVVVLSQI- 157
N+ + +IG G +G V + + AIK+ + Y S+ + ++ VL ++
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLG 80
Query: 158 NHRNVVGLLGCC---------------------------LETEVPLLVNEFVKLPTISWE 190
+H N++ LLG C LET+ P T+S +
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETD-PAFAIANSTASTLSSQ 139
Query: 191 VRIRIAAETAE-------------DIKSINILLDDNYTTKVCDFGASK 225
+ AA+ A ++ + NIL+ +NY K+ DFG S+
Sbjct: 140 QLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
DIK NILLD + K+CDFG S
Sbjct: 151 DIKPSNILLDRSGNIKLCDFGIS 173
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 165 LLG 167
LL
Sbjct: 88 LLN 90
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQS-QIEQCINKVVVLSQINHRNVVGLLGCC 169
+GRGG+G VF + D+ AIK+ R+ + E+ + +V L+++ H +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 170 LE 171
LE
Sbjct: 73 LE 74
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 39/155 (25%)
Query: 111 MIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
++G+G +G V + D++ AIKK R + ++ +++V++L+ +NH+ VV
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 170 LE--------TEVPLLVNEFVKLPTIS--------------------WEVRIRIAAETA- 200
LE T V F+++ W + +I +
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 201 --------EDIKSINILLDDNYTTKVCDFGASKLV 227
D+K +NI +D++ K+ DFG +K V
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 24 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 81
Query: 165 LLG 167
LL
Sbjct: 82 LLN 84
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 39/155 (25%)
Query: 111 MIGRGGYGTVFLGSLS-DNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGLLGCC 169
++G+G +G V + D++ AIKK R + ++ +++V++L+ +NH+ VV
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 170 LE--------TEVPLLVNEFVKLPTIS--------------------WEVRIRIAAETA- 200
LE T V F+++ W + +I +
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 201 --------EDIKSINILLDDNYTTKVCDFGASKLV 227
D+K +NI +D++ K+ DFG +K V
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 30.4 bits (67), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V S D K+ IA+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 59 VGSGAYGSV--CSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 30.4 bits (67), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 165 LLG 167
LL
Sbjct: 88 LLN 90
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 165 LLG 167
LL
Sbjct: 88 LLN 90
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 165 LLGC 168
LL
Sbjct: 88 LLNV 91
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NILLDD+ K+ DFG S
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFS 171
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 165 LLG 167
LL
Sbjct: 88 LLN 90
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NILLDD+ K+ DFG S
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFS 171
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 35 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 92
Query: 165 LLG 167
LL
Sbjct: 93 LLN 95
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 165 LLGC 168
LL
Sbjct: 88 LLNV 91
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NILLDD+ K+ DFG S
Sbjct: 136 DLKPENILLDDDMNIKLTDFGFS 158
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 165 LLG 167
LL
Sbjct: 88 LLN 90
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 33/147 (22%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 165 LLGC------CLETEVPLLVNEFVK---LPTISWEV-----------------RIRIAAE 198
LL E + LV E + I E+ + A
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 199 TAEDIKSINILLDDNYTTKVCDFGASK 225
D+K NI++ + T K+ DFG ++
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 31 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 88
Query: 165 LL 166
LL
Sbjct: 89 LL 90
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 28/154 (18%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNK---AIAIKKSRIVYQSQIEQC-INKVVVLS 155
++ ++ + ++G+G +G V L + AI I K +V Q +C + + VL+
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 156 QINHRNVVGLLGCCLETEVPL-LVNEFVKLPTISWEVR----------IRIAAETA---- 200
++ + L C +T L V E+V + + ++ + AAE +
Sbjct: 75 LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLF 134
Query: 201 ---------EDIKSINILLDDNYTTKVCDFGASK 225
D+K N++LD K+ DFG K
Sbjct: 135 FLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 33/147 (22%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 165 LLGC------CLETEVPLLVNEFVK---LPTISWEV-----------------RIRIAAE 198
LL E + LV E + I E+ + A
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGI 147
Query: 199 TAEDIKSINILLDDNYTTKVCDFGASK 225
D+K NI++ + T K+ DFG ++
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 106 YAYDRMIGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQ--SQIEQCINKVVVLSQIN-HRN 161
Y + +G+G YG V+ + +A+KK +Q + ++ ++++L++++ H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 162 VVGLLGCC--------------LETEVPLLVNEFVKLPTISWEVRIRI---------AAE 198
+V LL +ET++ ++ + P V ++
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGL 130
Query: 199 TAEDIKSINILLDDNYTTKVCDFGASK 225
D+K NILL+ KV DFG S+
Sbjct: 131 LHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LLD N ++ DFG+ + D T S++ GT Y
Sbjct: 216 DIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 258
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 202 DIKSINILL---DDNYTTKVCDFGASKLVPIDETQLST 236
D+K N+L +DN K+ DFG ++L P D L T
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT 168
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 60/164 (36%), Gaps = 33/164 (20%)
Query: 93 IFTAGELKIATN-NYAYDRMIGRGGYGTV-FLGSLSDNKAIAIKKSRIVYQSQIEQCINK 150
++ G + I N +Y + + +G GG+ V + L D A+K+ Q E+ +
Sbjct: 17 LYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQRE 76
Query: 151 VVVLSQINHRNVVGLLGCCLETE---------VPL-----LVNEFVKL---------PTI 187
+ NH N++ L+ CL +P L NE +L I
Sbjct: 77 ADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI 136
Query: 188 SWEV--------RIRIAAETAEDIKSINILLDDNYTTKVCDFGA 223
W + I D+K NILL D + D G+
Sbjct: 137 LWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGS 180
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++G
Sbjct: 32 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 89
Query: 165 LL 166
LL
Sbjct: 90 LL 91
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 65/164 (39%), Gaps = 36/164 (21%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIK----KSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+G G G V L + +A+A+K K + I E CINK+ +NH NVV
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LNHENVVK 68
Query: 165 LLGCCLETEVPLLVNEF-------------VKLPTISWE----------VRIRIAAETAE 201
G E + L E+ + +P + V + T
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQ-LSTMVQGTLGY 244
DIK N+LLD+ K+ DFG + + + + L + GTL Y
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK N+LLD N ++ DFG+ + D T S++ GT Y
Sbjct: 200 DIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 242
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 33/147 (22%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 165 LLGC------CLETEVPLLVNEFVKL---PTISWEV-----------------RIRIAAE 198
LL E + LV E + I E+ + A
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 199 TAEDIKSINILLDDNYTTKVCDFGASK 225
D+K NI++ + T K+ DFG ++
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
IG G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 35 IGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 167 GC 168
Sbjct: 93 DV 94
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 61/144 (42%), Gaps = 28/144 (19%)
Query: 110 RMIGRGGYGTV----FLGSLSDNKAIAIKKSRIVYQSQI-EQCINKVVVLSQINHRNVVG 164
R IG G +G V ++ + A+AIK + + E+ + + + + Q +H ++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 165 LLGCCLETEVPLLVN------------------EFVKLPTISWEVRIRIAAETAE----- 201
L+G E V +++ + L ++++ +A ++
Sbjct: 76 LIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 202 DIKSINILLDDNYTTKVCDFGASK 225
DI + N+L+ K+ DFG S+
Sbjct: 136 DIAARNVLVSATDCVKLGDFGLSR 159
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 94 FTAGELKIATNNYAYDRMIGRGGYGTVFLGSLSDNKAI-AIK-----KSRIVYQSQIEQC 147
F G L Y IG+G YG V + + +AI AIK K R + +E+
Sbjct: 16 FQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERI 75
Query: 148 INKVVVLSQINHRNVVGL 165
+V ++ +++H N+ L
Sbjct: 76 KTEVRLMKKLHHPNIARL 93
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK NIL+D N ++ DFG+ + D T S++ GT Y
Sbjct: 200 DIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDY 242
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 110 RMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINHRNVVGL 165
++IG G +G VF L ++ +AIKK ++ + + ++ ++ + H NVV L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKK--VLQDKRFKN--RELQIMRIVKHPNVVDL 97
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 46
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 47
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 25 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 69
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 47
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 47
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 24/104 (23%)
Query: 149 NKVVVLSQINHRNVVGLLGCCLET-EVPL-LVNEFVKL---------PTISWEVRIRIAA 197
++ +L + H +++ GCC + E L LV E+V L +I + A
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ 124
Query: 198 ETAE-------------DIKSINILLDDNYTTKVCDFGASKLVP 228
+ E ++ + N+LLD++ K+ DFG +K VP
Sbjct: 125 QICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 24/104 (23%)
Query: 149 NKVVVLSQINHRNVVGLLGCCLET-EVPL-LVNEFVKL---------PTISWEVRIRIAA 197
++ +L + H +++ GCC + E L LV E+V L +I + A
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ 124
Query: 198 ETAE-------------DIKSINILLDDNYTTKVCDFGASKLVP 228
+ E ++ + N+LLD++ K+ DFG +K VP
Sbjct: 125 QICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLLGC 168
+G G YG+V +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 46
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGYY 245
D+K NIL+D N K+ DFG S E + ++G+ G Y
Sbjct: 177 DVKPSNILMDKNGRVKLSDFGES------EYMVDKKIKGSRGTY 214
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLLGC 168
+G G YG+V +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
E + + Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 45
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLLGC 168
+G G YG+V +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLLGC 168
+G G YG+V +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLLGC 168
+G G YG+V +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLLGC 168
+G G YG+V +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLLGC 168
+G G YG+V +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 62/161 (38%), Gaps = 35/161 (21%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQI 157
+AT+ Y IG G YGTV+ +A+K R+ + + +V +L ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 158 ---NHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIR--------IAAETAE----- 201
H NVV L+ C + + + + ++R + AET +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 202 ----------------DIKSINILLDDNYTTKVCDFGASKL 226
D+K NIL+ T K+ DFG +++
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 44/163 (26%)
Query: 110 RMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQSQI----------------EQCINKVVV 153
R +G G YG V L + + K +++ +SQ E+ N++ +
Sbjct: 42 RKLGSGAYGEVLL--CKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99
Query: 154 LSQINHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIRIAAETAE------------ 201
L ++H N++ L + + LV EF + + ++ R + +
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGI 159
Query: 202 -----------DIKSINILLDDNYT---TKVCDFGASKLVPID 230
DIK NILL++ + K+ DFG S D
Sbjct: 160 CYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLLGC 168
+G G YG+V +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 37 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 167 GC 168
Sbjct: 95 DV 96
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 104 NNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
+ Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 42
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 35 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 167 GC 168
Sbjct: 93 DV 94
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 112 IGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 104 NNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
+ Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 42
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 37 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 167 GC 168
Sbjct: 95 DV 96
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 104 NNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIK---KSRI 138
+ Y ++G GG+G+V+ G +SDN +AIK K RI
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 42
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 27 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 167 GC 168
Sbjct: 85 DV 86
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 36 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 167 GC 168
Sbjct: 94 DV 95
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 36 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 167 GC 168
Sbjct: 94 DV 95
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 36 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 167 GC 168
Sbjct: 94 DV 95
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 32 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 167 GC 168
Sbjct: 90 DV 91
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 26 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 167 GC 168
Sbjct: 84 DV 85
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 35 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 167 GC 168
Sbjct: 93 DV 94
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 62/161 (38%), Gaps = 35/161 (21%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQI 157
+AT+ Y IG G YGTV+ +A+K R+ + + +V +L ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 158 ---NHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIR--------IAAETAE----- 201
H NVV L+ C + + + + ++R + AET +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 202 ----------------DIKSINILLDDNYTTKVCDFGASKL 226
D+K NIL+ T K+ DFG +++
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 62/161 (38%), Gaps = 35/161 (21%)
Query: 101 IATNNYAYDRMIGRGGYGTVFLG-SLSDNKAIAIKKSRIVYQSQ--IEQCINKVVVLSQI 157
+AT+ Y IG G YGTV+ +A+K R+ + + +V +L ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 158 ---NHRNVVGLLGCCLETEVPLLVNEFVKLPTISWEVRIR--------IAAETAE----- 201
H NVV L+ C + + + + ++R + AET +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 202 ----------------DIKSINILLDDNYTTKVCDFGASKL 226
D+K NIL+ T K+ DFG +++
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 32 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 167 GC 168
Sbjct: 90 DV 91
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 35 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 167 GC 168
Sbjct: 93 DV 94
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 27 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 167 GC 168
Sbjct: 85 DV 86
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 42 VGSGAYGSV--CAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 29 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 167 GC 168
Sbjct: 87 DV 88
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 37 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 167 GC 168
Sbjct: 95 DV 96
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 37 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 167 GC 168
Sbjct: 95 DV 96
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 28 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 85
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 41 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 167 GC 168
Sbjct: 99 DV 100
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 32 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 167 GC 168
Sbjct: 90 DV 91
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 53 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 167 GC 168
Sbjct: 111 DV 112
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 42 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 41 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLV 227
D+K N+LLD + K+ DFG S ++
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 42 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 16/84 (19%)
Query: 104 NNYAYDRMIGRGGYGTVFLGS-LSDNKAIAI-------KKSRIVYQSQIEQCINKVVVLS 155
N + R IG G +G ++LG+ + N+ +AI K +++Y+S+I + + +
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIP 66
Query: 156 QINHRNVVG--------LLGCCLE 171
+ V G LLG LE
Sbjct: 67 NVRWFGVEGDYNVLVMDLLGPSLE 90
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 53 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 32 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 167 GC 168
Sbjct: 90 DV 91
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLV 227
D+K N+LLD + K+ DFG S ++
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 30 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 167 GC 168
Sbjct: 88 DV 89
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 50 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 112 IGRGGYGTVFLGSLSDNKA---IAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVGLL 166
+G G YG+V + D K +A+KK +QS I ++ ++ +L + H NV+GLL
Sbjct: 49 VGSGAYGSV--CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGYYLHTSQ 250
D+K N+ LD K+ DFG ++++ DE V GT YY+ Q
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GT-PYYMSPEQ 187
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Query: 106 YAYDRMIGRGGYGTVFL------GSLSDNKAIAIKKSRIVYQSQIEQCINKVVVLSQINH 159
+ + ++G G + VFL G L K I KKS S +E N++ VL +I H
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCI--KKSPAFRDSSLE---NEIAVLKKIKH 65
Query: 160 RNVVGL 165
N+V L
Sbjct: 66 ENIVTL 71
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 44/156 (28%)
Query: 110 RMIGRGGYGTVFLGSLSDN-----KAIAIK--------KSRIVYQSQIEQCINKVVVLSQ 156
R +G G +G V L + +A+K + R +Q +IE +L
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIE-------ILRT 66
Query: 157 INHRNVVGLLGCCLET--EVPLLVNEFVKLPT---------ISWEVRIRIAAETAEDIKS 205
+ H ++V GCC + + LV E+V L + + + A + E +
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAY 126
Query: 206 I-------------NILLDDNYTTKVCDFGASKLVP 228
+ N+LLD++ K+ DFG +K VP
Sbjct: 127 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP 162
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGYYLHTSQ 250
D+K N+ LD K+ DFG ++++ D + T V GT YY+ Q
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GT-PYYMSPEQ 187
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 44/156 (28%)
Query: 110 RMIGRGGYGTVFLGSLSDN-----KAIAIK--------KSRIVYQSQIEQCINKVVVLSQ 156
R +G G +G V L + +A+K + R +Q +IE +L
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIE-------ILRT 67
Query: 157 INHRNVVGLLGCCLET--EVPLLVNEFVKLPT---------ISWEVRIRIAAETAEDIKS 205
+ H ++V GCC + + LV E+V L + + + A + E +
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAY 127
Query: 206 I-------------NILLDDNYTTKVCDFGASKLVP 228
+ N+LLD++ K+ DFG +K VP
Sbjct: 128 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP 163
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 63/169 (37%), Gaps = 38/169 (22%)
Query: 95 TAGELKIATNNYAYDRM----------IGRGGYGTVFLGSLSDNK---AIAIKKSRIVYQ 141
TA + NN DRM +G+G +G V L A+ I K +V Q
Sbjct: 322 TANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ 381
Query: 142 SQIEQC-INKVVVLSQINHRNVVGLLGCCLETEVPL-LVNEFVKLPTISWEVR------- 192
+C + + VL+ + L C +T L V E+V + + ++
Sbjct: 382 DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE 441
Query: 193 ---IRIAAETA-------------EDIKSINILLDDNYTTKVCDFGASK 225
+ AAE A D+K N++LD K+ DFG K
Sbjct: 442 PHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLV 227
D+K N+LL + T K+CDFG++ +
Sbjct: 163 DLKVENLLLSNQGTIKLCDFGSATTI 188
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 4/34 (11%)
Query: 202 DIKSINILLD--DNYTTKVCDFG-ASKLVPIDET 232
DIK N+L++ DN T K+CDFG A KL+P + +
Sbjct: 166 DIKPQNLLVNSKDN-TLKLCDFGSAKKLIPSEPS 198
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 33/147 (22%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 165 LLGC------CLETEVPLLVNEFVK---LPTISWEV-----------------RIRIAAE 198
LL E + LV E + I E+ + A
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGI 140
Query: 199 TAEDIKSINILLDDNYTTKVCDFGASK 225
D+K NI++ + T K+ DFG ++
Sbjct: 141 IHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLV 227
D+K N+LLD + K+ DFG S ++
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMM 166
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSD--------NKAIAIKKSRIVYQSQIEQCINKV 151
KI + ++ +G+G + +F G + + +K +++ E
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAA 63
Query: 152 VVLSQINHRNVVGLLGCCLETEVPLLVNEFVKL 184
++S+++H+++V G C + +LV EFVK
Sbjct: 64 SMMSKLSHKHLVLNYGVCFCGDENILVQEFVKF 96
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 33/147 (22%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 165 LLGC------CLETEVPLLVNEFVK---LPTISWEV-----------------RIRIAAE 198
LL E + LV E + I E+ + A
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGI 147
Query: 199 TAEDIKSINILLDDNYTTKVCDFGASK 225
D+K NI++ + T K+ DFG ++
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 40/145 (27%)
Query: 112 IGRGGYGTVFLGSLSDN---KAIAIK--------KSRIVYQSQI---EQCINKVV----- 152
IG+G +G VF G DN K +AIK Q +I QC + V
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 153 ----------VLSQINHRNVVGLL--GCCLETEVPLLVNEFVK-LPTISWEVRIRIAAET 199
++ + + + LL G ET++ ++ E +K L + E +I
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIH----- 142
Query: 200 AEDIKSINILLDDNYTTKVCDFGAS 224
DIK+ N+LL ++ K+ DFG +
Sbjct: 143 -RDIKAANVLLSEHGEVKLADFGVA 166
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 40/145 (27%)
Query: 112 IGRGGYGTVFLGSLSDN---KAIAIK--------KSRIVYQSQI---EQCINKVV----- 152
IG+G +G VF G DN K +AIK Q +I QC + V
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 153 ----------VLSQINHRNVVGLL--GCCLETEVPLLVNEFVK-LPTISWEVRIRIAAET 199
++ + + + LL G ET++ ++ E +K L + E +I
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIH----- 127
Query: 200 AEDIKSINILLDDNYTTKVCDFGAS 224
DIK+ N+LL ++ K+ DFG +
Sbjct: 128 -RDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 40/145 (27%)
Query: 112 IGRGGYGTVFLGSLSDN---KAIAIK--------KSRIVYQSQI---EQCINKVV----- 152
IG+G +G VF G DN K +AIK Q +I QC + V
Sbjct: 35 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 153 ----------VLSQINHRNVVGLL--GCCLETEVPLLVNEFVK-LPTISWEVRIRIAAET 199
++ + + + LL G ET++ ++ E +K L + E +I
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIH----- 147
Query: 200 AEDIKSINILLDDNYTTKVCDFGAS 224
DIK+ N+LL ++ K+ DFG +
Sbjct: 148 -RDIKAANVLLSEHGEVKLADFGVA 171
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSD--------NKAIAIKKSRIVYQSQIEQCINKV 151
KI + ++ +G+G + +F G + + +K +++ E
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAA 63
Query: 152 VVLSQINHRNVVGLLGCCLETEVPLLVNEFVKL 184
++S+++H+++V G C+ + +LV EFVK
Sbjct: 64 SMMSKLSHKHLVLNYGVCVCGDENILVQEFVKF 96
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 40/145 (27%)
Query: 112 IGRGGYGTVFLGSLSDN---KAIAIK--------KSRIVYQSQI---EQCINKVV----- 152
IG+G +G VF G DN K +AIK Q +I QC + V
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 153 ----------VLSQINHRNVVGLL--GCCLETEVPLLVNEFVK-LPTISWEVRIRIAAET 199
++ + + + LL G ET++ ++ E +K L + E +I
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIH----- 127
Query: 200 AEDIKSINILLDDNYTTKVCDFGAS 224
DIK+ N+LL ++ K+ DFG +
Sbjct: 128 -RDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 165 LLG 167
LL
Sbjct: 126 LLN 128
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 165 LLG 167
LL
Sbjct: 88 LLN 90
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 29 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 86
Query: 165 LLG 167
LL
Sbjct: 87 LLN 89
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 165 LLG 167
LL
Sbjct: 88 LLN 90
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 165 LLG 167
LL
Sbjct: 89 LLN 91
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 165 LLG 167
LL
Sbjct: 126 LLN 128
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 165 LLG 167
LL
Sbjct: 89 LLN 91
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 165 LLG 167
LL
Sbjct: 82 LLN 84
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 165 LLG 167
LL
Sbjct: 82 LLN 84
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V + L N +AIKK +Q+Q ++ ++V++ +NH+N++
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 165 LLG 167
LL
Sbjct: 81 LLN 83
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDE 231
D+K NIL++ K+CDFG S + IDE
Sbjct: 133 DVKPSNILVNSRGEIKLCDFGVSGQL-IDE 161
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 69/190 (36%), Gaps = 64/190 (33%)
Query: 100 KIATNNYAYDRMIGRGGYGTVFLGSLSDNKAIAIKKSRIVYQ------------SQIEQC 147
+ N + +++G G +G V + A I K+ + Q S+ E
Sbjct: 41 EFPRENLEFGKVLGSGAFGKVM-----NATAYGISKTGVSIQVAVKMLKEKADSSEREAL 95
Query: 148 INKVVVLSQI-NHRNVVGLLGCC------------------------------------- 169
++++ +++Q+ +H N+V LLG C
Sbjct: 96 MSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155
Query: 170 ----LETEVPLLVNEFVKLPTISWEVR-----IRIAAETAEDIKSINILLDDNYTTKVCD 220
LE E L V F L +++V + + D+ + N+L+ K+CD
Sbjct: 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICD 215
Query: 221 FGASKLVPID 230
FG ++ + D
Sbjct: 216 FGLARDIMSD 225
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 86 GSSDTAKIFTAGELKIATNNYAYDRMIGRGGYGTVF 121
GSS+T+ G KI + R++G+GGYG VF
Sbjct: 1 GSSETS--VNRGPEKIRPECFELLRVLGKGGYGKVF 34
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGYYLHTSQ 250
D+K N+ LD K+ DFG ++++ D T + GT YY+ Q
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGT-PYYMSPEQ 187
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 86 GSSDTAKIFTAGELKIATNNYAYDRMIGRGGYGTVF 121
GSS+T+ G KI + R++G+GGYG VF
Sbjct: 1 GSSETS--VNRGPEKIRPECFELLRVLGKGGYGKVF 34
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NIL++ K+CDFG S
Sbjct: 140 DVKPSNILVNSRGEIKLCDFGVS 162
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 38/160 (23%)
Query: 104 NNYAYDRM----------IGRGGYGTVFLGSLSDNK---AIAIKKSRIVYQSQIEQC-IN 149
NN DRM +G+G +G V L A+ I K +V Q +C +
Sbjct: 10 NNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMV 69
Query: 150 KVVVLSQINHRNVVGLLGCCLETEVPL-LVNEFVKLPTISWEVR----------IRIAAE 198
+ VL+ + L C +T L V E+V + + ++ + AAE
Sbjct: 70 EKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAE 129
Query: 199 TA-------------EDIKSINILLDDNYTTKVCDFGASK 225
A D+K N++LD K+ DFG K
Sbjct: 130 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NIL++ K+CDFG S
Sbjct: 192 DVKPSNILVNSRGEIKLCDFGVS 214
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NIL++ K+CDFG S
Sbjct: 149 DVKPSNILVNSRGEIKLCDFGVS 171
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NIL++ K+CDFG S
Sbjct: 157 DVKPSNILVNSRGEIKLCDFGVS 179
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 106 YAYDRMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHR 160
Y + IG G G V F L N +A+KK +Q+Q ++ ++V+L +NH+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGIN--VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 83
Query: 161 NVVGLLG 167
N++ LL
Sbjct: 84 NIISLLN 90
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NIL++ K+CDFG S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NIL++ K+CDFG S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NIL++ K+CDFG S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVS 152
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLGS-LSDNKAIAIK 134
EL++ N Y R IG G +G ++LG+ ++ + +AIK
Sbjct: 4 ELRVG-NKYRLGRKIGSGSFGDIYLGANIASGEEVAIK 40
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NIL++ K+CDFG S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 202 DIKSINILLDDNYTTKVCDFGAS 224
D+K NIL++ K+CDFG S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 110 RMIGRGGYGTV---FLGSLSDNKAIAIKKSRIVYQSQI--EQCINKVVVLSQINHRNVVG 164
+ IG G G V F L N +A+KK +Q+Q ++ ++V+L +NH+N++
Sbjct: 28 KPIGSGAQGIVCAAFDTVLGIN--VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIIS 85
Query: 165 LLG 167
LL
Sbjct: 86 LLN 88
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 27.3 bits (59), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 202 DIKSINILLDDNYTTKVCDFGASKLVPIDETQLSTMVQGTLGY 244
DIK NILLD ++ DFG+ + D T S + GT Y
Sbjct: 187 DIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDY 229
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 27.3 bits (59), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLGS-LSDNKAIAIK 134
EL++ N Y R IG G +G ++LG+ ++ + +AIK
Sbjct: 4 ELRVG-NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK 40
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 98 ELKIATNNYAYDRMIGRGGYGTVFLGS-LSDNKAIAIK 134
EL++ N Y R IG G +G ++LG+ ++ + +AIK
Sbjct: 2 ELRVG-NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK 38
>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
pdb|3F9I|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
Length = 249
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 192 RIRIAAETAEDIKSINILLDDNYTTKVCDF 221
++ I+ E +KS+ L DNYT +VC+
Sbjct: 40 KVIISGSNEEKLKSLGNALKDNYTIEVCNL 69
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,845,877
Number of Sequences: 62578
Number of extensions: 248692
Number of successful extensions: 2059
Number of sequences better than 100.0: 725
Number of HSP's better than 100.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 398
Number of HSP's that attempted gapping in prelim test: 1262
Number of HSP's gapped (non-prelim): 1015
length of query: 256
length of database: 14,973,337
effective HSP length: 97
effective length of query: 159
effective length of database: 8,903,271
effective search space: 1415620089
effective search space used: 1415620089
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)